HEADER OXIDOREDUCTASE 23-JUN-22 8DG1 TITLE CRYSTAL STRUCTURE OF ECDSBA IN A COMPLEX WITH DMSO COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIOL:DISULFIDE INTERCHANGE PROTEIN DSBA; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: DSBA, DSF, PPFA, B3860, JW3832; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: B0013 KEYWDS DISULFIDE OXIDOREDUCTASE, REDOX PROTEIN, MICROFRAG SCREENING, FBDD, KEYWDS 2 FRAGMENT, ANTIMICROBIAL PROTEIN, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR R.L.WHITEHOUSE,O.V.ILYICHOVA,A.J.TAYLOR REVDAT 3 25-OCT-23 8DG1 1 REMARK REVDAT 2 22-FEB-23 8DG1 1 JRNL REVDAT 1 07-DEC-22 8DG1 0 JRNL AUTH R.L.WHITEHOUSE,W.S.ALWAN,O.V.ILYICHOVA,A.J.TAYLOR, JRNL AUTH 2 I.R.CHANDRASHEKARAN,B.MOHANTY,B.C.DOAK,M.J.SCANLON JRNL TITL FRAGMENT SCREENING LIBRARIES FOR THE IDENTIFICATION OF JRNL TITL 2 PROTEIN HOT SPOTS AND THEIR MINIMAL BINDING PHARMACOPHORES. JRNL REF RSC MED CHEM V. 14 135 2023 JRNL REFN ESSN 2632-8682 JRNL PMID 36760747 JRNL DOI 10.1039/D2MD00253A REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19_4092 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.86 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 32719 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.310 REMARK 3 FREE R VALUE TEST SET COUNT : 1739 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.8600 - 4.4600 1.00 2664 130 0.1932 0.2016 REMARK 3 2 4.4600 - 3.5400 1.00 2619 138 0.1664 0.1953 REMARK 3 3 3.5400 - 3.1000 1.00 2582 161 0.1819 0.2291 REMARK 3 4 3.0900 - 2.8100 1.00 2581 144 0.1871 0.2279 REMARK 3 5 2.8100 - 2.6100 1.00 2589 138 0.1983 0.2239 REMARK 3 6 2.6100 - 2.4600 1.00 2574 131 0.1934 0.2152 REMARK 3 7 2.4600 - 2.3300 1.00 2539 173 0.1933 0.2438 REMARK 3 8 2.3300 - 2.2300 1.00 2551 150 0.2001 0.2621 REMARK 3 9 2.2300 - 2.1500 1.00 2561 151 0.2126 0.2577 REMARK 3 10 2.1500 - 2.0700 1.00 2580 141 0.2166 0.2638 REMARK 3 11 2.0700 - 2.0100 1.00 2565 145 0.2337 0.2634 REMARK 3 12 2.0100 - 1.9500 1.00 2575 137 0.2614 0.3089 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.207 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.780 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.13 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3008 REMARK 3 ANGLE : 0.901 4078 REMARK 3 CHIRALITY : 0.054 447 REMARK 3 PLANARITY : 0.007 531 REMARK 3 DIHEDRAL : 4.532 401 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 21 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.5845 -7.7230 -10.5592 REMARK 3 T TENSOR REMARK 3 T11: 0.8170 T22: 0.5452 REMARK 3 T33: 0.4822 T12: -0.0442 REMARK 3 T13: -0.0778 T23: -0.1312 REMARK 3 L TENSOR REMARK 3 L11: 6.6361 L22: 7.4295 REMARK 3 L33: 5.2885 L12: 1.0997 REMARK 3 L13: -1.1700 L23: -2.8021 REMARK 3 S TENSOR REMARK 3 S11: -0.3950 S12: 0.9677 S13: -0.7390 REMARK 3 S21: -1.6756 S22: 0.6173 S23: 0.3551 REMARK 3 S31: -0.0702 S32: -0.0682 S33: -0.1999 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 22 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.5943 -8.8231 6.3663 REMARK 3 T TENSOR REMARK 3 T11: 0.2921 T22: 0.2886 REMARK 3 T33: 0.2899 T12: -0.0601 REMARK 3 T13: -0.0028 T23: -0.0236 REMARK 3 L TENSOR REMARK 3 L11: 2.3253 L22: 3.1893 REMARK 3 L33: 3.0322 L12: 1.5413 REMARK 3 L13: 0.8323 L23: 0.7121 REMARK 3 S TENSOR REMARK 3 S11: 0.0213 S12: 0.0795 S13: -0.2410 REMARK 3 S21: 0.0263 S22: -0.0431 S23: 0.0192 REMARK 3 S31: 0.0851 S32: 0.1824 S33: 0.0352 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 66 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.0673 -0.2864 17.0946 REMARK 3 T TENSOR REMARK 3 T11: 0.2376 T22: 0.2355 REMARK 3 T33: 0.2298 T12: -0.0625 REMARK 3 T13: -0.0155 T23: -0.0289 REMARK 3 L TENSOR REMARK 3 L11: 2.8335 L22: 2.2040 REMARK 3 L33: 4.0169 L12: 0.6445 REMARK 3 L13: -0.3801 L23: -0.1462 REMARK 3 S TENSOR REMARK 3 S11: -0.0940 S12: -0.0633 S13: 0.0346 REMARK 3 S21: -0.1354 S22: 0.0764 S23: -0.0373 REMARK 3 S31: -0.0857 S32: 0.2953 S33: 0.0116 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 145 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.0562 -11.6801 -3.5853 REMARK 3 T TENSOR REMARK 3 T11: 0.4375 T22: 0.3725 REMARK 3 T33: 0.3314 T12: -0.0092 REMARK 3 T13: -0.0822 T23: -0.0683 REMARK 3 L TENSOR REMARK 3 L11: 1.3424 L22: 6.0486 REMARK 3 L33: 2.4350 L12: 0.6814 REMARK 3 L13: 0.6484 L23: 1.3267 REMARK 3 S TENSOR REMARK 3 S11: 0.0184 S12: 0.2280 S13: -0.1261 REMARK 3 S21: -0.7958 S22: -0.1544 S23: 0.6734 REMARK 3 S31: -0.0956 S32: -0.0746 S33: 0.1232 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 49 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.9608 0.3847 23.1121 REMARK 3 T TENSOR REMARK 3 T11: 0.2962 T22: 0.2595 REMARK 3 T33: 0.4016 T12: -0.0127 REMARK 3 T13: 0.0438 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 2.1170 L22: 1.6576 REMARK 3 L33: 3.2953 L12: 0.3383 REMARK 3 L13: -0.2520 L23: 1.3314 REMARK 3 S TENSOR REMARK 3 S11: -0.0490 S12: 0.0179 S13: 0.2670 REMARK 3 S21: -0.0533 S22: 0.0494 S23: 0.3978 REMARK 3 S31: -0.2715 S32: -0.2242 S33: 0.0008 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 50 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.3599 -5.0994 18.7462 REMARK 3 T TENSOR REMARK 3 T11: 0.3375 T22: 0.4708 REMARK 3 T33: 0.5564 T12: -0.1252 REMARK 3 T13: 0.0010 T23: -0.0419 REMARK 3 L TENSOR REMARK 3 L11: 2.5335 L22: 5.3757 REMARK 3 L33: 5.9773 L12: -1.7284 REMARK 3 L13: -0.9082 L23: 3.3360 REMARK 3 S TENSOR REMARK 3 S11: 0.4627 S12: -0.4592 S13: 0.9156 REMARK 3 S21: -0.2029 S22: -0.0367 S23: 0.2462 REMARK 3 S31: -0.1354 S32: -0.0559 S33: -0.3192 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 66 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.9670 -20.6582 14.3601 REMARK 3 T TENSOR REMARK 3 T11: 0.2481 T22: 0.2629 REMARK 3 T33: 0.2439 T12: -0.0723 REMARK 3 T13: 0.0076 T23: -0.0120 REMARK 3 L TENSOR REMARK 3 L11: 3.5754 L22: 3.4383 REMARK 3 L33: 2.7800 L12: 0.3534 REMARK 3 L13: -1.2455 L23: 0.3144 REMARK 3 S TENSOR REMARK 3 S11: -0.0642 S12: 0.1187 S13: -0.3108 REMARK 3 S21: 0.0274 S22: -0.1321 S23: -0.1282 REMARK 3 S31: 0.3523 S32: -0.2395 S33: 0.1760 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 129 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.4649 -8.2715 8.9650 REMARK 3 T TENSOR REMARK 3 T11: 0.4232 T22: 0.5091 REMARK 3 T33: 0.4178 T12: 0.0658 REMARK 3 T13: -0.1383 T23: 0.0279 REMARK 3 L TENSOR REMARK 3 L11: 4.2660 L22: 6.6427 REMARK 3 L33: 5.1696 L12: 3.1272 REMARK 3 L13: -1.4259 L23: -1.1492 REMARK 3 S TENSOR REMARK 3 S11: -0.1377 S12: 0.5930 S13: 0.5924 REMARK 3 S21: -0.6902 S22: -0.0698 S23: 0.6462 REMARK 3 S31: -0.5084 S32: -0.7742 S33: 0.2355 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 145 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.5738 5.0241 25.4286 REMARK 3 T TENSOR REMARK 3 T11: 0.3638 T22: 0.2191 REMARK 3 T33: 0.4609 T12: 0.0407 REMARK 3 T13: 0.0689 T23: -0.0301 REMARK 3 L TENSOR REMARK 3 L11: 1.8914 L22: 2.4470 REMARK 3 L33: 6.3313 L12: 1.1861 REMARK 3 L13: 0.6955 L23: 0.9434 REMARK 3 S TENSOR REMARK 3 S11: 0.0890 S12: -0.1338 S13: 0.3370 REMARK 3 S21: -0.1091 S22: -0.0648 S23: 0.3339 REMARK 3 S31: -0.3948 S32: -0.2434 S33: -0.0144 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "A" and (resid 2 through 34 or REMARK 3 resid 36 through 43 or resid 45 through REMARK 3 55 or resid 57 through 93 or (resid 94 REMARK 3 and (name N or name CA or name C or name REMARK 3 O or name CB )) or resid 95 through 97 or REMARK 3 (resid 98 and (name N or name CA or name REMARK 3 C or name O or name CB )) or resid 99 REMARK 3 through 117 or (resid 118 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 119 through 131 or (resid 132 REMARK 3 and (name N or name CA or name C or name REMARK 3 O or name CB )) or resid 133 through 138 REMARK 3 or (resid 140 and (name N or name CA or REMARK 3 name C or name O or name CB or name CG )) REMARK 3 or resid 141 through 145 or (resid 146 REMARK 3 and (name N or name CA or name C or name REMARK 3 O or name CB )) or resid 147 through 163 REMARK 3 or (resid 164 and (name N or name CA or REMARK 3 name C or name O or name CB )) or resid REMARK 3 165 through 188 or resid 1203 through REMARK 3 1205)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "B" and (resid 2 through 3 or REMARK 3 (resid 4 and (name N or name CA or name C REMARK 3 or name O or name CB )) or resid 5 REMARK 3 through 6 or (resid 7 and (name N or name REMARK 3 CA or name C or name O or name CB )) or REMARK 3 resid 8 through 34 or resid 36 through 43 REMARK 3 or resid 45 through 46 or (resid 47 and REMARK 3 (name N or name CA or name C or name O or REMARK 3 name CB )) or resid 48 through 55 or REMARK 3 resid 57 through 86 or (resid 87 and REMARK 3 (name N or name CA or name C or name O or REMARK 3 name CB or name CG or name CD )) or resid REMARK 3 88 through 119 or (resid 120 and (name N REMARK 3 or name CA or name C or name O or name CB REMARK 3 )) or resid 121 through 138 or resid 140 REMARK 3 through 188 or resid 1202 through 1204)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8DG1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-JUN-22. REMARK 100 THE DEPOSITION ID IS D_1000266577. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-AUG-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95372 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32730 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 48.230 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 1.18300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1FVK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 11-13 % PEG 8000, 5-7.5% GLYCEROL, REMARK 280 100MM NA CACODYLATE PH6.1, 1MM CUCL2, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 58.60700 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.60250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 58.60700 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 31.60250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 LYS A 189 REMARK 465 LYS B 189 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 4 CG CD OE1 OE2 REMARK 470 LYS A 7 CG CD CE NZ REMARK 470 GLU A 13 CG CD OE1 OE2 REMARK 470 LYS A 14 CG CD CE NZ REMARK 470 LYS A 47 CG CD CE NZ REMARK 470 GLU A 52 CG CD OE1 OE2 REMARK 470 LYS A 55 CG CD CE NZ REMARK 470 LYS A 70 CG CD CE NZ REMARK 470 LYS A 87 CE NZ REMARK 470 GLU A 120 CG CD OE1 OE2 REMARK 470 ARG A 148 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 158 CG CD CE NZ REMARK 470 GLU B 13 CG CD OE1 OE2 REMARK 470 LYS B 14 CG CD CE NZ REMARK 470 GLU B 52 CG CD OE1 OE2 REMARK 470 LYS B 55 CG CD CE NZ REMARK 470 LYS B 70 CG CD CE NZ REMARK 470 GLU B 94 CG CD OE1 OE2 REMARK 470 LYS B 98 CG CD CE NZ REMARK 470 LYS B 118 CG CD CE NZ REMARK 470 LYS B 132 CG CD CE NZ REMARK 470 LYS B 140 CD CE NZ REMARK 470 GLN B 146 CG CD OE1 NE2 REMARK 470 ARG B 148 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 158 CG CD CE NZ REMARK 470 GLN B 164 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 30 CA - CB - SG ANGL. DEV. = 7.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 7 -79.64 -105.37 REMARK 500 LYS A 98 -65.13 -98.57 REMARK 500 LYS B 7 -81.00 -104.19 REMARK 500 LYS B 98 -64.95 -106.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 201 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA B 1 N REMARK 620 2 ALA B 1 O 78.1 REMARK 620 3 GLU B 4 OE2 174.5 100.6 REMARK 620 4 ASP B 44 OD1 103.2 28.0 76.8 REMARK 620 5 ASP B 44 OD2 104.1 27.3 75.4 4.2 REMARK 620 N 1 2 3 4 DBREF 8DG1 A 1 189 UNP P0AEG4 DSBA_ECOLI 20 208 DBREF 8DG1 B 1 189 UNP P0AEG4 DSBA_ECOLI 20 208 SEQRES 1 A 189 ALA GLN TYR GLU ASP GLY LYS GLN TYR THR THR LEU GLU SEQRES 2 A 189 LYS PRO VAL ALA GLY ALA PRO GLN VAL LEU GLU PHE PHE SEQRES 3 A 189 SER PHE PHE CYS PRO HIS CYS TYR GLN PHE GLU GLU VAL SEQRES 4 A 189 LEU HIS ILE SER ASP ASN VAL LYS LYS LYS LEU PRO GLU SEQRES 5 A 189 GLY VAL LYS MET THR LYS TYR HIS VAL ASN PHE MET GLY SEQRES 6 A 189 GLY ASP LEU GLY LYS ASP LEU THR GLN ALA TRP ALA VAL SEQRES 7 A 189 ALA MET ALA LEU GLY VAL GLU ASP LYS VAL THR VAL PRO SEQRES 8 A 189 LEU PHE GLU GLY VAL GLN LYS THR GLN THR ILE ARG SER SEQRES 9 A 189 ALA SER ASP ILE ARG ASP VAL PHE ILE ASN ALA GLY ILE SEQRES 10 A 189 LYS GLY GLU GLU TYR ASP ALA ALA TRP ASN SER PHE VAL SEQRES 11 A 189 VAL LYS SER LEU VAL ALA GLN GLN GLU LYS ALA ALA ALA SEQRES 12 A 189 ASP VAL GLN LEU ARG GLY VAL PRO ALA MET PHE VAL ASN SEQRES 13 A 189 GLY LYS TYR GLN LEU ASN PRO GLN GLY MET ASP THR SER SEQRES 14 A 189 ASN MET ASP VAL PHE VAL GLN GLN TYR ALA ASP THR VAL SEQRES 15 A 189 LYS TYR LEU SER GLU LYS LYS SEQRES 1 B 189 ALA GLN TYR GLU ASP GLY LYS GLN TYR THR THR LEU GLU SEQRES 2 B 189 LYS PRO VAL ALA GLY ALA PRO GLN VAL LEU GLU PHE PHE SEQRES 3 B 189 SER PHE PHE CYS PRO HIS CYS TYR GLN PHE GLU GLU VAL SEQRES 4 B 189 LEU HIS ILE SER ASP ASN VAL LYS LYS LYS LEU PRO GLU SEQRES 5 B 189 GLY VAL LYS MET THR LYS TYR HIS VAL ASN PHE MET GLY SEQRES 6 B 189 GLY ASP LEU GLY LYS ASP LEU THR GLN ALA TRP ALA VAL SEQRES 7 B 189 ALA MET ALA LEU GLY VAL GLU ASP LYS VAL THR VAL PRO SEQRES 8 B 189 LEU PHE GLU GLY VAL GLN LYS THR GLN THR ILE ARG SER SEQRES 9 B 189 ALA SER ASP ILE ARG ASP VAL PHE ILE ASN ALA GLY ILE SEQRES 10 B 189 LYS GLY GLU GLU TYR ASP ALA ALA TRP ASN SER PHE VAL SEQRES 11 B 189 VAL LYS SER LEU VAL ALA GLN GLN GLU LYS ALA ALA ALA SEQRES 12 B 189 ASP VAL GLN LEU ARG GLY VAL PRO ALA MET PHE VAL ASN SEQRES 13 B 189 GLY LYS TYR GLN LEU ASN PRO GLN GLY MET ASP THR SER SEQRES 14 B 189 ASN MET ASP VAL PHE VAL GLN GLN TYR ALA ASP THR VAL SEQRES 15 B 189 LYS TYR LEU SER GLU LYS LYS HET DMS A 201 4 HET DMS A 202 4 HET DMS A 203 4 HET DMS A 204 4 HET DMS A 205 4 HET DMS A 206 4 HET DMS A 207 4 HET DMS A 208 4 HET DMS A 209 4 HET DMS A 210 4 HET DMS A 211 4 HET CU B 201 1 HET DMS B 202 4 HET DMS B 203 4 HET DMS B 204 4 HET DMS B 205 4 HET DMS B 206 4 HET DMS B 207 4 HET DMS B 208 4 HET DMS B 209 4 HET DMS B 210 4 HETNAM DMS DIMETHYL SULFOXIDE HETNAM CU COPPER (II) ION FORMUL 3 DMS 20(C2 H6 O S) FORMUL 14 CU CU 2+ FORMUL 24 HOH *80(H2 O) HELIX 1 AA1 CYS A 30 VAL A 39 1 10 HELIX 2 AA2 HIS A 41 LEU A 50 1 10 HELIX 3 AA3 GLY A 65 GLY A 83 1 19 HELIX 4 AA4 VAL A 84 LYS A 98 1 15 HELIX 5 AA5 SER A 104 ALA A 115 1 12 HELIX 6 AA6 LYS A 118 ASN A 127 1 10 HELIX 7 AA7 SER A 128 VAL A 145 1 18 HELIX 8 AA8 PRO A 163 MET A 166 5 4 HELIX 9 AA9 ASN A 170 GLU A 187 1 18 HELIX 10 AB1 CYS B 30 VAL B 39 1 10 HELIX 11 AB2 HIS B 41 LEU B 50 1 10 HELIX 12 AB3 GLY B 65 GLY B 83 1 19 HELIX 13 AB4 VAL B 84 LYS B 98 1 15 HELIX 14 AB5 SER B 104 ALA B 115 1 12 HELIX 15 AB6 LYS B 118 ASN B 127 1 10 HELIX 16 AB7 SER B 128 VAL B 145 1 18 HELIX 17 AB8 PRO B 163 MET B 166 5 4 HELIX 18 AB9 ASN B 170 GLU B 187 1 18 SHEET 1 AA1 5 TYR A 9 THR A 11 0 SHEET 2 AA1 5 TYR A 159 LEU A 161 -1 O GLN A 160 N THR A 10 SHEET 3 AA1 5 ALA A 152 VAL A 155 -1 N VAL A 155 O TYR A 159 SHEET 4 AA1 5 VAL A 22 PHE A 26 -1 N LEU A 23 O PHE A 154 SHEET 5 AA1 5 MET A 56 HIS A 60 1 O TYR A 59 N GLU A 24 SHEET 1 AA2 5 TYR B 9 THR B 11 0 SHEET 2 AA2 5 TYR B 159 LEU B 161 -1 O GLN B 160 N THR B 10 SHEET 3 AA2 5 ALA B 152 VAL B 155 -1 N VAL B 155 O TYR B 159 SHEET 4 AA2 5 VAL B 22 PHE B 26 -1 N LEU B 23 O PHE B 154 SHEET 5 AA2 5 MET B 56 HIS B 60 1 O THR B 57 N GLU B 24 SSBOND 1 CYS A 30 CYS A 33 1555 1555 2.10 SSBOND 2 CYS B 30 CYS B 33 1555 1555 2.12 LINK N ALA B 1 CU CU B 201 1555 1555 2.32 LINK O ALA B 1 CU CU B 201 1555 1555 2.08 LINK OE2 GLU B 4 CU CU B 201 1555 1555 2.33 LINK OD1 ASP B 44 CU CU B 201 1555 4546 2.35 LINK OD2 ASP B 44 CU CU B 201 1555 4546 2.33 CISPEP 1 VAL A 150 PRO A 151 0 -4.26 CISPEP 2 VAL B 150 PRO B 151 0 -4.49 CRYST1 117.214 63.205 74.848 90.00 125.25 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008531 0.000000 0.006030 0.00000 SCALE2 0.000000 0.015822 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016361 0.00000 MTRIX1 1 -0.958316 0.057341 0.279899 35.17030 1 MTRIX2 1 -0.279738 0.010975 -0.960014 9.06895 1 MTRIX3 1 -0.058120 -0.998294 0.005523 15.16810 1