HEADER IMMUNE SYSTEM 23-JUN-22 8DG9 TITLE CRYO-EM STRUCTURE OF RSV PREFUSION F TRIMER IN COMPLEX WITH THREE MXR TITLE 2 FABS COMPND MOL_ID: 1; COMPND 2 MOLECULE: FUSION GLYCOPROTEIN F0; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: MAB MXR HEAVY CHAIN, VH REGION; COMPND 7 CHAIN: H, F, D; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: MAB MXR LIGHT CHAIN, VL REGION; COMPND 11 CHAIN: L, G, E; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RESPIRATORY SYNCYTIAL VIRUS A2; SOURCE 3 ORGANISM_TAXID: 1972429; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_COMMON: HUMAN; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 12 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 14 MOL_ID: 3; SOURCE 15 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 16 ORGANISM_COMMON: HUMAN; SOURCE 17 ORGANISM_TAXID: 9606; SOURCE 18 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 19 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 20 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS CROSS-NEUTRALIZING, RSV, HMPV, MAB, IMMUNE SYSTEM EXPDTA ELECTRON MICROSCOPY AUTHOR J.V.RODARTE,M.PANCERA REVDAT 1 22-FEB-23 8DG9 0 JRNL AUTH M.CABAN,J.V.RODARTE,M.BIBBY,M.D.GRAY,J.J.TAYLOR,M.PANCERA, JRNL AUTH 2 J.BOONYARATANAKORNKIT JRNL TITL CROSS-PROTECTIVE ANTIBODIES AGAINST COMMON ENDEMIC JRNL TITL 2 RESPIRATORY VIRUSES. JRNL REF NAT COMMUN V. 14 798 2023 JRNL REFN ESSN 2041-1723 JRNL PMID 36781872 JRNL DOI 10.1038/S41467-023-36459-3 REMARK 2 REMARK 2 RESOLUTION. 2.24 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.240 REMARK 3 NUMBER OF PARTICLES : 354922 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8DG9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-JUN-22. REMARK 100 THE DEPOSITION ID IS D_1000265250. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : TRIMERIC COMPLEX OF THREE MXR REMARK 245 FABS BOUND TO RSV PREF PROTOMER REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.21 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 3000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: NONAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, H, L, B, F, G, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 LEU A 3 REMARK 465 LEU A 4 REMARK 465 ILE A 5 REMARK 465 LEU A 6 REMARK 465 LYS A 7 REMARK 465 ALA A 8 REMARK 465 ASN A 9 REMARK 465 ALA A 10 REMARK 465 ILE A 11 REMARK 465 THR A 12 REMARK 465 THR A 13 REMARK 465 ILE A 14 REMARK 465 LEU A 15 REMARK 465 THR A 16 REMARK 465 ALA A 17 REMARK 465 VAL A 18 REMARK 465 THR A 19 REMARK 465 PHE A 20 REMARK 465 CYS A 21 REMARK 465 PHE A 22 REMARK 465 ALA A 23 REMARK 465 SER A 24 REMARK 465 GLY A 25 REMARK 465 GLU A 66 REMARK 465 ASN A 67 REMARK 465 LYS A 68 REMARK 465 CYS A 69 REMARK 465 ASN A 70 REMARK 465 GLY A 71 REMARK 465 THR A 72 REMARK 465 GLN A 98 REMARK 465 SER A 99 REMARK 465 THR A 100 REMARK 465 PRO A 101 REMARK 465 ALA A 102 REMARK 465 THR A 103 REMARK 465 ASN A 104 REMARK 465 ASN A 105 REMARK 465 ARG A 106 REMARK 465 ALA A 107 REMARK 465 ARG A 108 REMARK 465 ARG A 109 REMARK 465 GLU A 110 REMARK 465 LEU A 111 REMARK 465 PRO A 112 REMARK 465 ARG A 113 REMARK 465 PHE A 114 REMARK 465 MET A 115 REMARK 465 ASN A 116 REMARK 465 TYR A 117 REMARK 465 THR A 118 REMARK 465 LEU A 119 REMARK 465 ASN A 120 REMARK 465 ASN A 121 REMARK 465 ALA A 122 REMARK 465 LYS A 123 REMARK 465 LYS A 124 REMARK 465 THR A 125 REMARK 465 ASN A 126 REMARK 465 VAL A 127 REMARK 465 THR A 128 REMARK 465 LEU A 129 REMARK 465 SER A 130 REMARK 465 LYS A 131 REMARK 465 LYS A 132 REMARK 465 ARG A 133 REMARK 465 LYS A 134 REMARK 465 ARG A 135 REMARK 465 ARG A 136 REMARK 465 ASN A 208 REMARK 465 LYS A 209 REMARK 465 GLN A 210 REMARK 465 SER A 211 REMARK 465 SER A 514 REMARK 465 ALA A 515 REMARK 465 ILE A 516 REMARK 465 GLY A 517 REMARK 465 GLY A 518 REMARK 465 TYR A 519 REMARK 465 ILE A 520 REMARK 465 PRO A 521 REMARK 465 GLU A 522 REMARK 465 ALA A 523 REMARK 465 PRO A 524 REMARK 465 ARG A 525 REMARK 465 ASP A 526 REMARK 465 GLY A 527 REMARK 465 GLN A 528 REMARK 465 ALA A 529 REMARK 465 TYR A 530 REMARK 465 VAL A 531 REMARK 465 ARG A 532 REMARK 465 LYS A 533 REMARK 465 ASP A 534 REMARK 465 GLY A 535 REMARK 465 GLU A 536 REMARK 465 TRP A 537 REMARK 465 VAL A 538 REMARK 465 LEU A 539 REMARK 465 LEU A 540 REMARK 465 SER A 541 REMARK 465 THR A 542 REMARK 465 PHE A 543 REMARK 465 LEU A 544 REMARK 465 GLY A 545 REMARK 465 LEU A 546 REMARK 465 ASN A 547 REMARK 465 ASP A 548 REMARK 465 ILE A 549 REMARK 465 PHE A 550 REMARK 465 GLU A 551 REMARK 465 ALA A 552 REMARK 465 GLN A 553 REMARK 465 LYS A 554 REMARK 465 ILE A 555 REMARK 465 GLU A 556 REMARK 465 TRP A 557 REMARK 465 HIS A 558 REMARK 465 GLU A 559 REMARK 465 GLY A 560 REMARK 465 SER A 561 REMARK 465 HIS A 562 REMARK 465 HIS A 563 REMARK 465 HIS A 564 REMARK 465 HIS A 565 REMARK 465 HIS A 566 REMARK 465 HIS A 567 REMARK 465 HIS A 568 REMARK 465 HIS A 569 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 LEU B 3 REMARK 465 LEU B 4 REMARK 465 ILE B 5 REMARK 465 LEU B 6 REMARK 465 LYS B 7 REMARK 465 ALA B 8 REMARK 465 ASN B 9 REMARK 465 ALA B 10 REMARK 465 ILE B 11 REMARK 465 THR B 12 REMARK 465 THR B 13 REMARK 465 ILE B 14 REMARK 465 LEU B 15 REMARK 465 THR B 16 REMARK 465 ALA B 17 REMARK 465 VAL B 18 REMARK 465 THR B 19 REMARK 465 PHE B 20 REMARK 465 CYS B 21 REMARK 465 PHE B 22 REMARK 465 ALA B 23 REMARK 465 SER B 24 REMARK 465 GLY B 25 REMARK 465 GLU B 66 REMARK 465 ASN B 67 REMARK 465 LYS B 68 REMARK 465 CYS B 69 REMARK 465 ASN B 70 REMARK 465 GLY B 71 REMARK 465 THR B 72 REMARK 465 GLN B 98 REMARK 465 SER B 99 REMARK 465 THR B 100 REMARK 465 PRO B 101 REMARK 465 ALA B 102 REMARK 465 THR B 103 REMARK 465 ASN B 104 REMARK 465 ASN B 105 REMARK 465 ARG B 106 REMARK 465 ALA B 107 REMARK 465 ARG B 108 REMARK 465 ARG B 109 REMARK 465 GLU B 110 REMARK 465 LEU B 111 REMARK 465 PRO B 112 REMARK 465 ARG B 113 REMARK 465 PHE B 114 REMARK 465 MET B 115 REMARK 465 ASN B 116 REMARK 465 TYR B 117 REMARK 465 THR B 118 REMARK 465 LEU B 119 REMARK 465 ASN B 120 REMARK 465 ASN B 121 REMARK 465 ALA B 122 REMARK 465 LYS B 123 REMARK 465 LYS B 124 REMARK 465 THR B 125 REMARK 465 ASN B 126 REMARK 465 VAL B 127 REMARK 465 THR B 128 REMARK 465 LEU B 129 REMARK 465 SER B 130 REMARK 465 LYS B 131 REMARK 465 LYS B 132 REMARK 465 ARG B 133 REMARK 465 LYS B 134 REMARK 465 ARG B 135 REMARK 465 ARG B 136 REMARK 465 ASN B 208 REMARK 465 LYS B 209 REMARK 465 GLN B 210 REMARK 465 SER B 211 REMARK 465 SER B 514 REMARK 465 ALA B 515 REMARK 465 ILE B 516 REMARK 465 GLY B 517 REMARK 465 GLY B 518 REMARK 465 TYR B 519 REMARK 465 ILE B 520 REMARK 465 PRO B 521 REMARK 465 GLU B 522 REMARK 465 ALA B 523 REMARK 465 PRO B 524 REMARK 465 ARG B 525 REMARK 465 ASP B 526 REMARK 465 GLY B 527 REMARK 465 GLN B 528 REMARK 465 ALA B 529 REMARK 465 TYR B 530 REMARK 465 VAL B 531 REMARK 465 ARG B 532 REMARK 465 LYS B 533 REMARK 465 ASP B 534 REMARK 465 GLY B 535 REMARK 465 GLU B 536 REMARK 465 TRP B 537 REMARK 465 VAL B 538 REMARK 465 LEU B 539 REMARK 465 LEU B 540 REMARK 465 SER B 541 REMARK 465 THR B 542 REMARK 465 PHE B 543 REMARK 465 LEU B 544 REMARK 465 GLY B 545 REMARK 465 LEU B 546 REMARK 465 ASN B 547 REMARK 465 ASP B 548 REMARK 465 ILE B 549 REMARK 465 PHE B 550 REMARK 465 GLU B 551 REMARK 465 ALA B 552 REMARK 465 GLN B 553 REMARK 465 LYS B 554 REMARK 465 ILE B 555 REMARK 465 GLU B 556 REMARK 465 TRP B 557 REMARK 465 HIS B 558 REMARK 465 GLU B 559 REMARK 465 GLY B 560 REMARK 465 SER B 561 REMARK 465 HIS B 562 REMARK 465 HIS B 563 REMARK 465 HIS B 564 REMARK 465 HIS B 565 REMARK 465 HIS B 566 REMARK 465 HIS B 567 REMARK 465 HIS B 568 REMARK 465 HIS B 569 REMARK 465 MET C 1 REMARK 465 GLU C 2 REMARK 465 LEU C 3 REMARK 465 LEU C 4 REMARK 465 ILE C 5 REMARK 465 LEU C 6 REMARK 465 LYS C 7 REMARK 465 ALA C 8 REMARK 465 ASN C 9 REMARK 465 ALA C 10 REMARK 465 ILE C 11 REMARK 465 THR C 12 REMARK 465 THR C 13 REMARK 465 ILE C 14 REMARK 465 LEU C 15 REMARK 465 THR C 16 REMARK 465 ALA C 17 REMARK 465 VAL C 18 REMARK 465 THR C 19 REMARK 465 PHE C 20 REMARK 465 CYS C 21 REMARK 465 PHE C 22 REMARK 465 ALA C 23 REMARK 465 SER C 24 REMARK 465 GLY C 25 REMARK 465 GLU C 66 REMARK 465 ASN C 67 REMARK 465 LYS C 68 REMARK 465 CYS C 69 REMARK 465 ASN C 70 REMARK 465 GLY C 71 REMARK 465 THR C 72 REMARK 465 GLN C 98 REMARK 465 SER C 99 REMARK 465 THR C 100 REMARK 465 PRO C 101 REMARK 465 ALA C 102 REMARK 465 THR C 103 REMARK 465 ASN C 104 REMARK 465 ASN C 105 REMARK 465 ARG C 106 REMARK 465 ALA C 107 REMARK 465 ARG C 108 REMARK 465 ARG C 109 REMARK 465 GLU C 110 REMARK 465 LEU C 111 REMARK 465 PRO C 112 REMARK 465 ARG C 113 REMARK 465 PHE C 114 REMARK 465 MET C 115 REMARK 465 ASN C 116 REMARK 465 TYR C 117 REMARK 465 THR C 118 REMARK 465 LEU C 119 REMARK 465 ASN C 120 REMARK 465 ASN C 121 REMARK 465 ALA C 122 REMARK 465 LYS C 123 REMARK 465 LYS C 124 REMARK 465 THR C 125 REMARK 465 ASN C 126 REMARK 465 VAL C 127 REMARK 465 THR C 128 REMARK 465 LEU C 129 REMARK 465 SER C 130 REMARK 465 LYS C 131 REMARK 465 LYS C 132 REMARK 465 ARG C 133 REMARK 465 LYS C 134 REMARK 465 ARG C 135 REMARK 465 ARG C 136 REMARK 465 ASN C 208 REMARK 465 LYS C 209 REMARK 465 GLN C 210 REMARK 465 SER C 211 REMARK 465 SER C 514 REMARK 465 ALA C 515 REMARK 465 ILE C 516 REMARK 465 GLY C 517 REMARK 465 GLY C 518 REMARK 465 TYR C 519 REMARK 465 ILE C 520 REMARK 465 PRO C 521 REMARK 465 GLU C 522 REMARK 465 ALA C 523 REMARK 465 PRO C 524 REMARK 465 ARG C 525 REMARK 465 ASP C 526 REMARK 465 GLY C 527 REMARK 465 GLN C 528 REMARK 465 ALA C 529 REMARK 465 TYR C 530 REMARK 465 VAL C 531 REMARK 465 ARG C 532 REMARK 465 LYS C 533 REMARK 465 ASP C 534 REMARK 465 GLY C 535 REMARK 465 GLU C 536 REMARK 465 TRP C 537 REMARK 465 VAL C 538 REMARK 465 LEU C 539 REMARK 465 LEU C 540 REMARK 465 SER C 541 REMARK 465 THR C 542 REMARK 465 PHE C 543 REMARK 465 LEU C 544 REMARK 465 GLY C 545 REMARK 465 LEU C 546 REMARK 465 ASN C 547 REMARK 465 ASP C 548 REMARK 465 ILE C 549 REMARK 465 PHE C 550 REMARK 465 GLU C 551 REMARK 465 ALA C 552 REMARK 465 GLN C 553 REMARK 465 LYS C 554 REMARK 465 ILE C 555 REMARK 465 GLU C 556 REMARK 465 TRP C 557 REMARK 465 HIS C 558 REMARK 465 GLU C 559 REMARK 465 GLY C 560 REMARK 465 SER C 561 REMARK 465 HIS C 562 REMARK 465 HIS C 563 REMARK 465 HIS C 564 REMARK 465 HIS C 565 REMARK 465 HIS C 566 REMARK 465 HIS C 567 REMARK 465 HIS C 568 REMARK 465 HIS C 569 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU H 1 CG CD OE1 OE2 REMARK 470 GLU F 1 CG CD OE1 OE2 REMARK 470 GLU D 1 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N GLN B 26 OD1 ASN B 363 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 346 -119.32 57.31 REMARK 500 SER A 362 -115.22 59.99 REMARK 500 ASN A 371 55.59 -96.70 REMARK 500 ASP A 486 38.07 -141.69 REMARK 500 VAL H 48 -60.89 -104.17 REMARK 500 GLN H 81 70.23 57.70 REMARK 500 ASN L 51 -16.97 70.98 REMARK 500 ASP L 60 2.91 -67.96 REMARK 500 ALA L 84 -176.44 -171.09 REMARK 500 SER B 362 -107.80 67.77 REMARK 500 ASN B 371 53.90 -95.29 REMARK 500 ASP B 486 35.47 -142.25 REMARK 500 VAL F 48 -62.19 -104.29 REMARK 500 ASN G 51 -18.00 71.18 REMARK 500 ASP G 60 1.47 -67.01 REMARK 500 ALA C 346 -127.12 59.13 REMARK 500 SER C 362 -120.32 61.13 REMARK 500 ASN C 371 51.87 -93.58 REMARK 500 VAL D 48 -60.80 -102.51 REMARK 500 GLN D 81 70.02 56.17 REMARK 500 ASN E 51 -18.33 71.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-27419 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF RSV PREFUSION F TRIMER IN COMPLEX WITH THREE REMARK 900 MXR FABS DBREF 8DG9 A 1 569 PDB 8DG9 8DG9 1 569 DBREF 8DG9 H 1 113 PDB 8DG9 8DG9 1 113 DBREF 8DG9 L 1 106A PDB 8DG9 8DG9 1 106 DBREF 8DG9 B 1 569 PDB 8DG9 8DG9 1 569 DBREF 8DG9 F 1 113 PDB 8DG9 8DG9 1 113 DBREF 8DG9 G 1 106A PDB 8DG9 8DG9 1 106 DBREF 8DG9 C 1 569 PDB 8DG9 8DG9 1 569 DBREF 8DG9 D 1 113 PDB 8DG9 8DG9 1 113 DBREF 8DG9 E 1 106A PDB 8DG9 8DG9 1 106 SEQRES 1 A 569 MET GLU LEU LEU ILE LEU LYS ALA ASN ALA ILE THR THR SEQRES 2 A 569 ILE LEU THR ALA VAL THR PHE CYS PHE ALA SER GLY GLN SEQRES 3 A 569 ASN ILE THR GLU GLU PHE TYR GLN SER THR CYS SER ALA SEQRES 4 A 569 VAL SER LYS GLY TYR LEU SER ALA LEU ARG THR GLY TRP SEQRES 5 A 569 TYR THR SER VAL ILE THR ILE GLU LEU SER ASN ILE LYS SEQRES 6 A 569 GLU ASN LYS CYS ASN GLY THR ASP ALA LYS VAL LYS LEU SEQRES 7 A 569 ILE LYS GLN GLU LEU ASP LYS TYR LYS ASN ALA VAL THR SEQRES 8 A 569 GLU LEU GLN LEU LEU MET GLN SER THR PRO ALA THR ASN SEQRES 9 A 569 ASN ARG ALA ARG ARG GLU LEU PRO ARG PHE MET ASN TYR SEQRES 10 A 569 THR LEU ASN ASN ALA LYS LYS THR ASN VAL THR LEU SER SEQRES 11 A 569 LYS LYS ARG LYS ARG ARG PHE LEU GLY PHE LEU LEU GLY SEQRES 12 A 569 VAL GLY SER ALA ILE ALA SER GLY VAL ALA VAL CYS LYS SEQRES 13 A 569 VAL LEU HIS LEU GLU GLY GLU VAL ASN LYS ILE LYS SER SEQRES 14 A 569 ALA LEU LEU SER THR ASN LYS ALA VAL VAL SER LEU SER SEQRES 15 A 569 ASN GLY VAL SER VAL LEU THR PHE LYS VAL LEU ASP LEU SEQRES 16 A 569 LYS ASN TYR ILE ASP LYS GLN LEU LEU PRO ILE LEU ASN SEQRES 17 A 569 LYS GLN SER CYS SER ILE SER ASN ILE GLU THR VAL ILE SEQRES 18 A 569 GLU PHE GLN GLN LYS ASN ASN ARG LEU LEU GLU ILE THR SEQRES 19 A 569 ARG GLU PHE SER VAL ASN ALA GLY VAL THR THR PRO VAL SEQRES 20 A 569 SER THR TYR MET LEU THR ASN SER GLU LEU LEU SER LEU SEQRES 21 A 569 ILE ASN ASP MET PRO ILE THR ASN ASP GLN LYS LYS LEU SEQRES 22 A 569 MET SER ASN ASN VAL GLN ILE VAL ARG GLN GLN SER TYR SEQRES 23 A 569 SER ILE MET CYS ILE ILE LYS GLU GLU VAL LEU ALA TYR SEQRES 24 A 569 VAL VAL GLN LEU PRO LEU TYR GLY VAL ILE ASP THR PRO SEQRES 25 A 569 CYS TRP LYS LEU HIS THR SER PRO LEU CYS THR THR ASN SEQRES 26 A 569 THR LYS GLU GLY SER ASN ILE CYS LEU THR ARG THR ASP SEQRES 27 A 569 ARG GLY TRP TYR CYS ASP ASN ALA GLY SER VAL SER PHE SEQRES 28 A 569 PHE PRO GLN ALA GLU THR CYS LYS VAL GLN SER ASN ARG SEQRES 29 A 569 VAL PHE CYS ASP THR MET ASN SER LEU THR LEU PRO SER SEQRES 30 A 569 GLU VAL ASN LEU CYS ASN VAL ASP ILE PHE ASN PRO LYS SEQRES 31 A 569 TYR ASP CYS LYS ILE MET THR SER LYS THR ASP VAL SER SEQRES 32 A 569 SER SER VAL ILE THR SER LEU GLY ALA ILE VAL SER CYS SEQRES 33 A 569 TYR GLY LYS THR LYS CYS THR ALA SER ASN LYS ASN ARG SEQRES 34 A 569 GLY ILE ILE LYS THR PHE SER ASN GLY CYS ASP TYR VAL SEQRES 35 A 569 SER ASN LYS GLY VAL ASP THR VAL SER VAL GLY ASN THR SEQRES 36 A 569 LEU TYR TYR VAL ASN LYS GLN GLU GLY LYS SER LEU TYR SEQRES 37 A 569 VAL LYS GLY GLU PRO ILE ILE ASN PHE TYR ASP PRO LEU SEQRES 38 A 569 VAL PHE PRO SER ASP GLU PHE ASP ALA SER ILE SER GLN SEQRES 39 A 569 VAL ASN GLU LYS ILE ASN GLN SER LEU ALA PHE ILE ARG SEQRES 40 A 569 LYS SER ASP GLU LEU LEU SER ALA ILE GLY GLY TYR ILE SEQRES 41 A 569 PRO GLU ALA PRO ARG ASP GLY GLN ALA TYR VAL ARG LYS SEQRES 42 A 569 ASP GLY GLU TRP VAL LEU LEU SER THR PHE LEU GLY LEU SEQRES 43 A 569 ASN ASP ILE PHE GLU ALA GLN LYS ILE GLU TRP HIS GLU SEQRES 44 A 569 GLY SER HIS HIS HIS HIS HIS HIS HIS HIS SEQRES 1 H 120 GLU VAL GLN VAL VAL GLU SER GLY GLY GLY LEU VAL LYS SEQRES 2 H 120 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 120 PHE PRO PHE SER SER TYR LYS MET ASP TRP VAL ARG GLN SEQRES 4 H 120 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER SER ILE SER SEQRES 5 H 120 ALA SER GLY SER TYR ILE ASN TYR ALA ASP SER VAL LYS SEQRES 6 H 120 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN SER SEQRES 7 H 120 LEU TYR LEU GLN MET LYS SER LEU ARG ALA ASP ASP THR SEQRES 8 H 120 ALA VAL TYR PHE CYS ALA ARG ASP GLY GLY ARG GLU LEU SEQRES 9 H 120 SER PRO PHE GLU LYS TRP GLY GLN GLY ILE LEU VAL THR SEQRES 10 H 120 VAL SER SER SEQRES 1 L 111 GLN SER VAL LEU THR GLN PRO PRO SER VAL SER GLY ALA SEQRES 2 L 111 PRO GLY GLN ARG VAL THR ILE SER CYS THR GLY THR ASN SEQRES 3 L 111 SER ASN ILE GLY THR GLY TYR ASP VAL HIS TRP TYR GLN SEQRES 4 L 111 GLN LEU PRO GLY THR ALA PRO LYS VAL VAL LEU PHE ASP SEQRES 5 L 111 ASN ASN ASN ARG PRO SER GLY VAL PRO ASP ARG PHE SER SEQRES 6 L 111 GLY SER LYS SER GLY THR SER ALA ALA LEU ALA ILE THR SEQRES 7 L 111 GLY LEU GLN ALA GLU ASP GLU ALA VAL TYR TYR CYS GLN SEQRES 8 L 111 SER TYR ASP LYS SER LEU GLY GLY TRP VAL PHE GLY GLY SEQRES 9 L 111 GLY THR LYS LEU THR VAL LEU SEQRES 1 B 569 MET GLU LEU LEU ILE LEU LYS ALA ASN ALA ILE THR THR SEQRES 2 B 569 ILE LEU THR ALA VAL THR PHE CYS PHE ALA SER GLY GLN SEQRES 3 B 569 ASN ILE THR GLU GLU PHE TYR GLN SER THR CYS SER ALA SEQRES 4 B 569 VAL SER LYS GLY TYR LEU SER ALA LEU ARG THR GLY TRP SEQRES 5 B 569 TYR THR SER VAL ILE THR ILE GLU LEU SER ASN ILE LYS SEQRES 6 B 569 GLU ASN LYS CYS ASN GLY THR ASP ALA LYS VAL LYS LEU SEQRES 7 B 569 ILE LYS GLN GLU LEU ASP LYS TYR LYS ASN ALA VAL THR SEQRES 8 B 569 GLU LEU GLN LEU LEU MET GLN SER THR PRO ALA THR ASN SEQRES 9 B 569 ASN ARG ALA ARG ARG GLU LEU PRO ARG PHE MET ASN TYR SEQRES 10 B 569 THR LEU ASN ASN ALA LYS LYS THR ASN VAL THR LEU SER SEQRES 11 B 569 LYS LYS ARG LYS ARG ARG PHE LEU GLY PHE LEU LEU GLY SEQRES 12 B 569 VAL GLY SER ALA ILE ALA SER GLY VAL ALA VAL CYS LYS SEQRES 13 B 569 VAL LEU HIS LEU GLU GLY GLU VAL ASN LYS ILE LYS SER SEQRES 14 B 569 ALA LEU LEU SER THR ASN LYS ALA VAL VAL SER LEU SER SEQRES 15 B 569 ASN GLY VAL SER VAL LEU THR PHE LYS VAL LEU ASP LEU SEQRES 16 B 569 LYS ASN TYR ILE ASP LYS GLN LEU LEU PRO ILE LEU ASN SEQRES 17 B 569 LYS GLN SER CYS SER ILE SER ASN ILE GLU THR VAL ILE SEQRES 18 B 569 GLU PHE GLN GLN LYS ASN ASN ARG LEU LEU GLU ILE THR SEQRES 19 B 569 ARG GLU PHE SER VAL ASN ALA GLY VAL THR THR PRO VAL SEQRES 20 B 569 SER THR TYR MET LEU THR ASN SER GLU LEU LEU SER LEU SEQRES 21 B 569 ILE ASN ASP MET PRO ILE THR ASN ASP GLN LYS LYS LEU SEQRES 22 B 569 MET SER ASN ASN VAL GLN ILE VAL ARG GLN GLN SER TYR SEQRES 23 B 569 SER ILE MET CYS ILE ILE LYS GLU GLU VAL LEU ALA TYR SEQRES 24 B 569 VAL VAL GLN LEU PRO LEU TYR GLY VAL ILE ASP THR PRO SEQRES 25 B 569 CYS TRP LYS LEU HIS THR SER PRO LEU CYS THR THR ASN SEQRES 26 B 569 THR LYS GLU GLY SER ASN ILE CYS LEU THR ARG THR ASP SEQRES 27 B 569 ARG GLY TRP TYR CYS ASP ASN ALA GLY SER VAL SER PHE SEQRES 28 B 569 PHE PRO GLN ALA GLU THR CYS LYS VAL GLN SER ASN ARG SEQRES 29 B 569 VAL PHE CYS ASP THR MET ASN SER LEU THR LEU PRO SER SEQRES 30 B 569 GLU VAL ASN LEU CYS ASN VAL ASP ILE PHE ASN PRO LYS SEQRES 31 B 569 TYR ASP CYS LYS ILE MET THR SER LYS THR ASP VAL SER SEQRES 32 B 569 SER SER VAL ILE THR SER LEU GLY ALA ILE VAL SER CYS SEQRES 33 B 569 TYR GLY LYS THR LYS CYS THR ALA SER ASN LYS ASN ARG SEQRES 34 B 569 GLY ILE ILE LYS THR PHE SER ASN GLY CYS ASP TYR VAL SEQRES 35 B 569 SER ASN LYS GLY VAL ASP THR VAL SER VAL GLY ASN THR SEQRES 36 B 569 LEU TYR TYR VAL ASN LYS GLN GLU GLY LYS SER LEU TYR SEQRES 37 B 569 VAL LYS GLY GLU PRO ILE ILE ASN PHE TYR ASP PRO LEU SEQRES 38 B 569 VAL PHE PRO SER ASP GLU PHE ASP ALA SER ILE SER GLN SEQRES 39 B 569 VAL ASN GLU LYS ILE ASN GLN SER LEU ALA PHE ILE ARG SEQRES 40 B 569 LYS SER ASP GLU LEU LEU SER ALA ILE GLY GLY TYR ILE SEQRES 41 B 569 PRO GLU ALA PRO ARG ASP GLY GLN ALA TYR VAL ARG LYS SEQRES 42 B 569 ASP GLY GLU TRP VAL LEU LEU SER THR PHE LEU GLY LEU SEQRES 43 B 569 ASN ASP ILE PHE GLU ALA GLN LYS ILE GLU TRP HIS GLU SEQRES 44 B 569 GLY SER HIS HIS HIS HIS HIS HIS HIS HIS SEQRES 1 F 120 GLU VAL GLN VAL VAL GLU SER GLY GLY GLY LEU VAL LYS SEQRES 2 F 120 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 F 120 PHE PRO PHE SER SER TYR LYS MET ASP TRP VAL ARG GLN SEQRES 4 F 120 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER SER ILE SER SEQRES 5 F 120 ALA SER GLY SER TYR ILE ASN TYR ALA ASP SER VAL LYS SEQRES 6 F 120 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN SER SEQRES 7 F 120 LEU TYR LEU GLN MET LYS SER LEU ARG ALA ASP ASP THR SEQRES 8 F 120 ALA VAL TYR PHE CYS ALA ARG ASP GLY GLY ARG GLU LEU SEQRES 9 F 120 SER PRO PHE GLU LYS TRP GLY GLN GLY ILE LEU VAL THR SEQRES 10 F 120 VAL SER SER SEQRES 1 G 111 GLN SER VAL LEU THR GLN PRO PRO SER VAL SER GLY ALA SEQRES 2 G 111 PRO GLY GLN ARG VAL THR ILE SER CYS THR GLY THR ASN SEQRES 3 G 111 SER ASN ILE GLY THR GLY TYR ASP VAL HIS TRP TYR GLN SEQRES 4 G 111 GLN LEU PRO GLY THR ALA PRO LYS VAL VAL LEU PHE ASP SEQRES 5 G 111 ASN ASN ASN ARG PRO SER GLY VAL PRO ASP ARG PHE SER SEQRES 6 G 111 GLY SER LYS SER GLY THR SER ALA ALA LEU ALA ILE THR SEQRES 7 G 111 GLY LEU GLN ALA GLU ASP GLU ALA VAL TYR TYR CYS GLN SEQRES 8 G 111 SER TYR ASP LYS SER LEU GLY GLY TRP VAL PHE GLY GLY SEQRES 9 G 111 GLY THR LYS LEU THR VAL LEU SEQRES 1 C 569 MET GLU LEU LEU ILE LEU LYS ALA ASN ALA ILE THR THR SEQRES 2 C 569 ILE LEU THR ALA VAL THR PHE CYS PHE ALA SER GLY GLN SEQRES 3 C 569 ASN ILE THR GLU GLU PHE TYR GLN SER THR CYS SER ALA SEQRES 4 C 569 VAL SER LYS GLY TYR LEU SER ALA LEU ARG THR GLY TRP SEQRES 5 C 569 TYR THR SER VAL ILE THR ILE GLU LEU SER ASN ILE LYS SEQRES 6 C 569 GLU ASN LYS CYS ASN GLY THR ASP ALA LYS VAL LYS LEU SEQRES 7 C 569 ILE LYS GLN GLU LEU ASP LYS TYR LYS ASN ALA VAL THR SEQRES 8 C 569 GLU LEU GLN LEU LEU MET GLN SER THR PRO ALA THR ASN SEQRES 9 C 569 ASN ARG ALA ARG ARG GLU LEU PRO ARG PHE MET ASN TYR SEQRES 10 C 569 THR LEU ASN ASN ALA LYS LYS THR ASN VAL THR LEU SER SEQRES 11 C 569 LYS LYS ARG LYS ARG ARG PHE LEU GLY PHE LEU LEU GLY SEQRES 12 C 569 VAL GLY SER ALA ILE ALA SER GLY VAL ALA VAL CYS LYS SEQRES 13 C 569 VAL LEU HIS LEU GLU GLY GLU VAL ASN LYS ILE LYS SER SEQRES 14 C 569 ALA LEU LEU SER THR ASN LYS ALA VAL VAL SER LEU SER SEQRES 15 C 569 ASN GLY VAL SER VAL LEU THR PHE LYS VAL LEU ASP LEU SEQRES 16 C 569 LYS ASN TYR ILE ASP LYS GLN LEU LEU PRO ILE LEU ASN SEQRES 17 C 569 LYS GLN SER CYS SER ILE SER ASN ILE GLU THR VAL ILE SEQRES 18 C 569 GLU PHE GLN GLN LYS ASN ASN ARG LEU LEU GLU ILE THR SEQRES 19 C 569 ARG GLU PHE SER VAL ASN ALA GLY VAL THR THR PRO VAL SEQRES 20 C 569 SER THR TYR MET LEU THR ASN SER GLU LEU LEU SER LEU SEQRES 21 C 569 ILE ASN ASP MET PRO ILE THR ASN ASP GLN LYS LYS LEU SEQRES 22 C 569 MET SER ASN ASN VAL GLN ILE VAL ARG GLN GLN SER TYR SEQRES 23 C 569 SER ILE MET CYS ILE ILE LYS GLU GLU VAL LEU ALA TYR SEQRES 24 C 569 VAL VAL GLN LEU PRO LEU TYR GLY VAL ILE ASP THR PRO SEQRES 25 C 569 CYS TRP LYS LEU HIS THR SER PRO LEU CYS THR THR ASN SEQRES 26 C 569 THR LYS GLU GLY SER ASN ILE CYS LEU THR ARG THR ASP SEQRES 27 C 569 ARG GLY TRP TYR CYS ASP ASN ALA GLY SER VAL SER PHE SEQRES 28 C 569 PHE PRO GLN ALA GLU THR CYS LYS VAL GLN SER ASN ARG SEQRES 29 C 569 VAL PHE CYS ASP THR MET ASN SER LEU THR LEU PRO SER SEQRES 30 C 569 GLU VAL ASN LEU CYS ASN VAL ASP ILE PHE ASN PRO LYS SEQRES 31 C 569 TYR ASP CYS LYS ILE MET THR SER LYS THR ASP VAL SER SEQRES 32 C 569 SER SER VAL ILE THR SER LEU GLY ALA ILE VAL SER CYS SEQRES 33 C 569 TYR GLY LYS THR LYS CYS THR ALA SER ASN LYS ASN ARG SEQRES 34 C 569 GLY ILE ILE LYS THR PHE SER ASN GLY CYS ASP TYR VAL SEQRES 35 C 569 SER ASN LYS GLY VAL ASP THR VAL SER VAL GLY ASN THR SEQRES 36 C 569 LEU TYR TYR VAL ASN LYS GLN GLU GLY LYS SER LEU TYR SEQRES 37 C 569 VAL LYS GLY GLU PRO ILE ILE ASN PHE TYR ASP PRO LEU SEQRES 38 C 569 VAL PHE PRO SER ASP GLU PHE ASP ALA SER ILE SER GLN SEQRES 39 C 569 VAL ASN GLU LYS ILE ASN GLN SER LEU ALA PHE ILE ARG SEQRES 40 C 569 LYS SER ASP GLU LEU LEU SER ALA ILE GLY GLY TYR ILE SEQRES 41 C 569 PRO GLU ALA PRO ARG ASP GLY GLN ALA TYR VAL ARG LYS SEQRES 42 C 569 ASP GLY GLU TRP VAL LEU LEU SER THR PHE LEU GLY LEU SEQRES 43 C 569 ASN ASP ILE PHE GLU ALA GLN LYS ILE GLU TRP HIS GLU SEQRES 44 C 569 GLY SER HIS HIS HIS HIS HIS HIS HIS HIS SEQRES 1 D 120 GLU VAL GLN VAL VAL GLU SER GLY GLY GLY LEU VAL LYS SEQRES 2 D 120 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 D 120 PHE PRO PHE SER SER TYR LYS MET ASP TRP VAL ARG GLN SEQRES 4 D 120 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER SER ILE SER SEQRES 5 D 120 ALA SER GLY SER TYR ILE ASN TYR ALA ASP SER VAL LYS SEQRES 6 D 120 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN SER SEQRES 7 D 120 LEU TYR LEU GLN MET LYS SER LEU ARG ALA ASP ASP THR SEQRES 8 D 120 ALA VAL TYR PHE CYS ALA ARG ASP GLY GLY ARG GLU LEU SEQRES 9 D 120 SER PRO PHE GLU LYS TRP GLY GLN GLY ILE LEU VAL THR SEQRES 10 D 120 VAL SER SER SEQRES 1 E 111 GLN SER VAL LEU THR GLN PRO PRO SER VAL SER GLY ALA SEQRES 2 E 111 PRO GLY GLN ARG VAL THR ILE SER CYS THR GLY THR ASN SEQRES 3 E 111 SER ASN ILE GLY THR GLY TYR ASP VAL HIS TRP TYR GLN SEQRES 4 E 111 GLN LEU PRO GLY THR ALA PRO LYS VAL VAL LEU PHE ASP SEQRES 5 E 111 ASN ASN ASN ARG PRO SER GLY VAL PRO ASP ARG PHE SER SEQRES 6 E 111 GLY SER LYS SER GLY THR SER ALA ALA LEU ALA ILE THR SEQRES 7 E 111 GLY LEU GLN ALA GLU ASP GLU ALA VAL TYR TYR CYS GLN SEQRES 8 E 111 SER TYR ASP LYS SER LEU GLY GLY TRP VAL PHE GLY GLY SEQRES 9 E 111 GLY THR LYS LEU THR VAL LEU HET NAG A5001 14 HET NAG A5002 14 HET NAG B 601 14 HET NAG B 602 14 HET NAG C 601 14 HET NAG C 602 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 10 NAG 6(C8 H15 N O6) HELIX 1 AA1 ALA A 74 MET A 97 1 24 HELIX 2 AA2 LEU A 138 LEU A 142 5 5 HELIX 3 AA3 ILE A 148 HIS A 159 1 12 HELIX 4 AA4 GLY A 162 LEU A 171 1 10 HELIX 5 AA5 LEU A 195 LEU A 203 1 9 HELIX 6 AA6 ILE A 217 VAL A 239 1 23 HELIX 7 AA7 THR A 253 MET A 264 1 12 HELIX 8 AA8 THR A 267 ASN A 276 1 10 HELIX 9 AA9 ASN A 277 GLN A 284 1 8 HELIX 10 AB1 MET A 370 SER A 372 5 3 HELIX 11 AB2 ASN A 380 ASP A 385 1 6 HELIX 12 AB3 PRO A 473 TYR A 478 5 6 HELIX 13 AB4 ILE A 492 LEU A 513 1 22 HELIX 14 AB5 PRO H 28 TYR H 32 5 5 HELIX 15 AB6 ARG H 83 THR H 87 5 5 HELIX 16 AB7 GLN L 79 GLU L 83 5 5 HELIX 17 AB8 ALA B 74 MET B 97 1 24 HELIX 18 AB9 LEU B 138 LEU B 142 5 5 HELIX 19 AC1 ILE B 148 HIS B 159 1 12 HELIX 20 AC2 GLY B 162 LEU B 171 1 10 HELIX 21 AC3 LEU B 195 GLN B 202 1 8 HELIX 22 AC4 ILE B 217 VAL B 239 1 23 HELIX 23 AC5 THR B 253 ASP B 263 1 11 HELIX 24 AC6 THR B 267 ASN B 276 1 10 HELIX 25 AC7 ASN B 277 GLN B 284 1 8 HELIX 26 AC8 MET B 370 SER B 372 5 3 HELIX 27 AC9 PRO B 376 VAL B 379 5 4 HELIX 28 AD1 ASN B 380 ASP B 385 1 6 HELIX 29 AD2 PRO B 473 TYR B 478 5 6 HELIX 30 AD3 ILE B 492 LEU B 513 1 22 HELIX 31 AD4 PRO F 28 TYR F 32 5 5 HELIX 32 AD5 ARG F 83 THR F 87 5 5 HELIX 33 AD6 GLN G 79 GLU G 83 5 5 HELIX 34 AD7 ALA C 74 MET C 97 1 24 HELIX 35 AD8 LEU C 138 LEU C 142 5 5 HELIX 36 AD9 ILE C 148 HIS C 159 1 12 HELIX 37 AE1 GLY C 162 LEU C 171 1 10 HELIX 38 AE2 LEU C 195 GLN C 202 1 8 HELIX 39 AE3 ILE C 217 VAL C 239 1 23 HELIX 40 AE4 THR C 253 ASP C 263 1 11 HELIX 41 AE5 THR C 267 ASN C 276 1 10 HELIX 42 AE6 ASN C 277 GLN C 284 1 8 HELIX 43 AE7 MET C 370 SER C 372 5 3 HELIX 44 AE8 PRO C 376 VAL C 379 5 4 HELIX 45 AE9 ASN C 380 ASP C 385 1 6 HELIX 46 AF1 PRO C 473 TYR C 478 5 6 HELIX 47 AF2 ILE C 492 LEU C 513 1 22 HELIX 48 AF3 PRO D 28 TYR D 32 5 5 HELIX 49 AF4 ARG D 83 THR D 87 5 5 HELIX 50 AF5 GLN E 79 GLU E 83 5 5 SHEET 1 AA1 7 CYS A 358 GLN A 361 0 SHEET 2 AA1 7 ARG A 364 ASP A 368 -1 O PHE A 366 N LYS A 359 SHEET 3 AA1 7 SER A 38 ARG A 49 1 N LEU A 45 O VAL A 365 SHEET 4 AA1 7 VAL A 308 THR A 318 -1 O HIS A 317 N ALA A 39 SHEET 5 AA1 7 GLY A 340 ASN A 345 -1 O TYR A 342 N TRP A 314 SHEET 6 AA1 7 SER A 348 PHE A 352 -1 O SER A 348 N ASN A 345 SHEET 7 AA1 7 LEU A 373 PRO A 376 -1 O LEU A 375 N VAL A 349 SHEET 1 AA2 5 CYS A 358 GLN A 361 0 SHEET 2 AA2 5 ARG A 364 ASP A 368 -1 O PHE A 366 N LYS A 359 SHEET 3 AA2 5 SER A 38 ARG A 49 1 N LEU A 45 O VAL A 365 SHEET 4 AA2 5 THR A 29 TYR A 33 -1 N TYR A 33 O SER A 38 SHEET 5 AA2 5 LYS A 465 VAL A 469 1 O LEU A 467 N PHE A 32 SHEET 1 AA3 6 LYS A 176 SER A 180 0 SHEET 2 AA3 6 SER A 186 ASP A 194 -1 O THR A 189 N ALA A 177 SHEET 3 AA3 6 GLY A 51 GLU A 60 1 N THR A 58 O PHE A 190 SHEET 4 AA3 6 VAL A 296 LEU A 305 -1 O LEU A 297 N ILE A 59 SHEET 5 AA3 6 TYR A 286 ILE A 292 -1 N ILE A 288 O VAL A 300 SHEET 6 AA3 6 VAL A 243 THR A 244 -1 N THR A 244 O SER A 287 SHEET 1 AA4 4 LEU A 321 CYS A 322 0 SHEET 2 AA4 4 CYS A 333 ARG A 336 -1 O LEU A 334 N LEU A 321 SHEET 3 AA4 4 LYS A 394 SER A 398 -1 O MET A 396 N THR A 335 SHEET 4 AA4 4 GLU A 487 SER A 491 -1 O GLU A 487 N THR A 397 SHEET 1 AA5 3 SER A 404 ILE A 407 0 SHEET 2 AA5 3 GLY A 411 CYS A 416 -1 O ILE A 413 N VAL A 406 SHEET 3 AA5 3 GLY A 438 SER A 443 -1 O GLY A 438 N CYS A 416 SHEET 1 AA6 4 GLY A 430 THR A 434 0 SHEET 2 AA6 4 CYS A 422 ASN A 426 -1 N ALA A 424 O LYS A 433 SHEET 3 AA6 4 THR A 449 VAL A 452 -1 O SER A 451 N THR A 423 SHEET 4 AA6 4 THR A 455 TYR A 458 -1 O TYR A 457 N VAL A 450 SHEET 1 AA7 4 VAL H 5 SER H 7 0 SHEET 2 AA7 4 SER H 21 ALA H 23 -1 O ALA H 23 N VAL H 5 SHEET 3 AA7 4 SER H 77 TYR H 79 -1 O LEU H 78 N CYS H 22 SHEET 4 AA7 4 SER H 70 ASP H 72 -1 N SER H 70 O TYR H 79 SHEET 1 AA8 6 LEU H 11 VAL H 12 0 SHEET 2 AA8 6 ILE H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 AA8 6 ALA H 88 ARG H 94 -1 N TYR H 90 O ILE H 107 SHEET 4 AA8 6 MET H 34 GLN H 39 -1 N VAL H 37 O PHE H 91 SHEET 5 AA8 6 LEU H 45 ILE H 51 -1 O VAL H 48 N TRP H 36 SHEET 6 AA8 6 ILE H 57 TYR H 59 -1 O ASN H 58 N SER H 50 SHEET 1 AA9 4 LEU H 11 VAL H 12 0 SHEET 2 AA9 4 ILE H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 AA9 4 ALA H 88 ARG H 94 -1 N TYR H 90 O ILE H 107 SHEET 4 AA9 4 LYS H 102 TRP H 103 -1 O LYS H 102 N ARG H 94 SHEET 1 AB1 5 SER L 9 GLY L 13 0 SHEET 2 AB1 5 THR L 102 VAL L 106 1 O LYS L 103 N VAL L 11 SHEET 3 AB1 5 VAL L 85 ASP L 92 -1 N TYR L 86 O THR L 102 SHEET 4 AB1 5 HIS L 34 GLN L 38 -1 N TYR L 36 O TYR L 87 SHEET 5 AB1 5 LYS L 45 LEU L 48 -1 O LYS L 45 N GLN L 37 SHEET 1 AB2 4 SER L 9 GLY L 13 0 SHEET 2 AB2 4 THR L 102 VAL L 106 1 O LYS L 103 N VAL L 11 SHEET 3 AB2 4 VAL L 85 ASP L 92 -1 N TYR L 86 O THR L 102 SHEET 4 AB2 4 GLY L 95B PHE L 98 -1 O VAL L 97 N SER L 90 SHEET 1 AB3 3 VAL L 19 THR L 24 0 SHEET 2 AB3 3 SER L 70 ILE L 75 -1 O ALA L 71 N CYS L 23 SHEET 3 AB3 3 SER L 65 SER L 67 -1 N SER L 65 O ALA L 72 SHEET 1 AB4 7 CYS B 358 GLN B 361 0 SHEET 2 AB4 7 ARG B 364 ASP B 368 -1 O PHE B 366 N LYS B 359 SHEET 3 AB4 7 SER B 38 ARG B 49 1 N LEU B 45 O VAL B 365 SHEET 4 AB4 7 VAL B 308 THR B 318 -1 O HIS B 317 N ALA B 39 SHEET 5 AB4 7 GLY B 340 ASN B 345 -1 O GLY B 340 N LEU B 316 SHEET 6 AB4 7 SER B 348 PHE B 352 -1 O SER B 350 N CYS B 343 SHEET 7 AB4 7 LEU B 373 LEU B 375 -1 O LEU B 373 N PHE B 351 SHEET 1 AB5 5 CYS B 358 GLN B 361 0 SHEET 2 AB5 5 ARG B 364 ASP B 368 -1 O PHE B 366 N LYS B 359 SHEET 3 AB5 5 SER B 38 ARG B 49 1 N LEU B 45 O VAL B 365 SHEET 4 AB5 5 THR B 29 TYR B 33 -1 N TYR B 33 O SER B 38 SHEET 5 AB5 5 LYS B 465 VAL B 469 1 O LEU B 467 N PHE B 32 SHEET 1 AB6 6 LYS B 176 SER B 180 0 SHEET 2 AB6 6 SER B 186 ASP B 194 -1 O THR B 189 N ALA B 177 SHEET 3 AB6 6 GLY B 51 GLU B 60 1 N THR B 58 O PHE B 190 SHEET 4 AB6 6 VAL B 296 LEU B 305 -1 O LEU B 297 N ILE B 59 SHEET 5 AB6 6 TYR B 286 LYS B 293 -1 N ILE B 288 O VAL B 300 SHEET 6 AB6 6 VAL B 243 THR B 244 -1 N THR B 244 O SER B 287 SHEET 1 AB7 4 LEU B 321 CYS B 322 0 SHEET 2 AB7 4 CYS B 333 ARG B 336 -1 O LEU B 334 N LEU B 321 SHEET 3 AB7 4 LYS B 394 SER B 398 -1 O MET B 396 N THR B 335 SHEET 4 AB7 4 ALA B 490 SER B 491 -1 O ALA B 490 N ILE B 395 SHEET 1 AB8 3 SER B 404 ILE B 407 0 SHEET 2 AB8 3 GLY B 411 CYS B 416 -1 O ILE B 413 N VAL B 406 SHEET 3 AB8 3 GLY B 438 SER B 443 -1 O GLY B 438 N CYS B 416 SHEET 1 AB9 4 GLY B 430 THR B 434 0 SHEET 2 AB9 4 CYS B 422 ASN B 426 -1 N ALA B 424 O LYS B 433 SHEET 3 AB9 4 THR B 449 VAL B 452 -1 O SER B 451 N THR B 423 SHEET 4 AB9 4 THR B 455 TYR B 458 -1 O TYR B 457 N VAL B 450 SHEET 1 AC1 4 VAL F 5 SER F 7 0 SHEET 2 AC1 4 SER F 21 ALA F 23 -1 O SER F 21 N SER F 7 SHEET 3 AC1 4 SER F 77 TYR F 79 -1 O LEU F 78 N CYS F 22 SHEET 4 AC1 4 SER F 70 ASP F 72 -1 N SER F 70 O TYR F 79 SHEET 1 AC2 6 LEU F 11 VAL F 12 0 SHEET 2 AC2 6 ILE F 107 VAL F 111 1 O THR F 110 N VAL F 12 SHEET 3 AC2 6 ALA F 88 ARG F 94 -1 N TYR F 90 O ILE F 107 SHEET 4 AC2 6 MET F 34 GLN F 39 -1 N VAL F 37 O PHE F 91 SHEET 5 AC2 6 LEU F 45 ILE F 51 -1 O VAL F 48 N TRP F 36 SHEET 6 AC2 6 ILE F 57 TYR F 59 -1 O ASN F 58 N SER F 50 SHEET 1 AC3 4 LEU F 11 VAL F 12 0 SHEET 2 AC3 4 ILE F 107 VAL F 111 1 O THR F 110 N VAL F 12 SHEET 3 AC3 4 ALA F 88 ARG F 94 -1 N TYR F 90 O ILE F 107 SHEET 4 AC3 4 LYS F 102 TRP F 103 -1 O LYS F 102 N ARG F 94 SHEET 1 AC4 5 SER G 9 GLY G 13 0 SHEET 2 AC4 5 THR G 102 VAL G 106 1 O LYS G 103 N VAL G 11 SHEET 3 AC4 5 VAL G 85 ASP G 92 -1 N TYR G 86 O THR G 102 SHEET 4 AC4 5 VAL G 33 GLN G 38 -1 N HIS G 34 O GLN G 89 SHEET 5 AC4 5 LYS G 45 LEU G 48 -1 O LYS G 45 N GLN G 37 SHEET 1 AC5 4 SER G 9 GLY G 13 0 SHEET 2 AC5 4 THR G 102 VAL G 106 1 O LYS G 103 N VAL G 11 SHEET 3 AC5 4 VAL G 85 ASP G 92 -1 N TYR G 86 O THR G 102 SHEET 4 AC5 4 GLY G 95B PHE G 98 -1 O VAL G 97 N SER G 90 SHEET 1 AC6 3 VAL G 19 THR G 24 0 SHEET 2 AC6 3 SER G 70 ILE G 75 -1 O ALA G 71 N CYS G 23 SHEET 3 AC6 3 SER G 65 SER G 67 -1 N SER G 65 O ALA G 72 SHEET 1 AC7 7 CYS C 358 GLN C 361 0 SHEET 2 AC7 7 ARG C 364 ASP C 368 -1 O PHE C 366 N LYS C 359 SHEET 3 AC7 7 SER C 38 ARG C 49 1 N LEU C 45 O VAL C 365 SHEET 4 AC7 7 VAL C 308 THR C 318 -1 O HIS C 317 N ALA C 39 SHEET 5 AC7 7 GLY C 340 ASN C 345 -1 O GLY C 340 N LEU C 316 SHEET 6 AC7 7 SER C 348 PHE C 352 -1 O SER C 350 N CYS C 343 SHEET 7 AC7 7 LEU C 373 LEU C 375 -1 O LEU C 373 N PHE C 351 SHEET 1 AC8 5 CYS C 358 GLN C 361 0 SHEET 2 AC8 5 ARG C 364 ASP C 368 -1 O PHE C 366 N LYS C 359 SHEET 3 AC8 5 SER C 38 ARG C 49 1 N LEU C 45 O VAL C 365 SHEET 4 AC8 5 THR C 29 TYR C 33 -1 N TYR C 33 O SER C 38 SHEET 5 AC8 5 LYS C 465 VAL C 469 1 O LYS C 465 N GLU C 30 SHEET 1 AC9 6 LYS C 176 SER C 180 0 SHEET 2 AC9 6 SER C 186 ASP C 194 -1 O THR C 189 N ALA C 177 SHEET 3 AC9 6 GLY C 51 GLU C 60 1 N THR C 58 O PHE C 190 SHEET 4 AC9 6 VAL C 296 LEU C 305 -1 O LEU C 297 N ILE C 59 SHEET 5 AC9 6 TYR C 286 ILE C 292 -1 N ILE C 288 O VAL C 300 SHEET 6 AC9 6 VAL C 243 THR C 244 -1 N THR C 244 O SER C 287 SHEET 1 AD1 4 LEU C 321 CYS C 322 0 SHEET 2 AD1 4 CYS C 333 ARG C 336 -1 O LEU C 334 N LEU C 321 SHEET 3 AD1 4 LYS C 394 SER C 398 -1 O SER C 398 N CYS C 333 SHEET 4 AD1 4 ALA C 490 SER C 491 -1 O ALA C 490 N ILE C 395 SHEET 1 AD2 3 SER C 404 ILE C 407 0 SHEET 2 AD2 3 GLY C 411 CYS C 416 -1 O ILE C 413 N VAL C 406 SHEET 3 AD2 3 GLY C 438 SER C 443 -1 O GLY C 438 N CYS C 416 SHEET 1 AD3 4 GLY C 430 THR C 434 0 SHEET 2 AD3 4 CYS C 422 ASN C 426 -1 N ALA C 424 O ILE C 432 SHEET 3 AD3 4 THR C 449 VAL C 452 -1 O SER C 451 N THR C 423 SHEET 4 AD3 4 THR C 455 TYR C 458 -1 O TYR C 457 N VAL C 450 SHEET 1 AD4 4 VAL D 5 SER D 7 0 SHEET 2 AD4 4 SER D 21 ALA D 23 -1 O SER D 21 N SER D 7 SHEET 3 AD4 4 SER D 77 TYR D 79 -1 O LEU D 78 N CYS D 22 SHEET 4 AD4 4 SER D 70 ASP D 72 -1 N SER D 70 O TYR D 79 SHEET 1 AD5 6 LEU D 11 VAL D 12 0 SHEET 2 AD5 6 ILE D 107 VAL D 111 1 O THR D 110 N VAL D 12 SHEET 3 AD5 6 ALA D 88 ARG D 94 -1 N TYR D 90 O ILE D 107 SHEET 4 AD5 6 MET D 34 GLN D 39 -1 N VAL D 37 O PHE D 91 SHEET 5 AD5 6 LEU D 45 ILE D 51 -1 O VAL D 48 N TRP D 36 SHEET 6 AD5 6 ILE D 57 TYR D 59 -1 O ASN D 58 N SER D 50 SHEET 1 AD6 4 LEU D 11 VAL D 12 0 SHEET 2 AD6 4 ILE D 107 VAL D 111 1 O THR D 110 N VAL D 12 SHEET 3 AD6 4 ALA D 88 ARG D 94 -1 N TYR D 90 O ILE D 107 SHEET 4 AD6 4 LYS D 102 TRP D 103 -1 O LYS D 102 N ARG D 94 SHEET 1 AD7 5 SER E 9 GLY E 13 0 SHEET 2 AD7 5 THR E 102 VAL E 106 1 O THR E 105 N VAL E 11 SHEET 3 AD7 5 ALA E 84 ASP E 92 -1 N ALA E 84 O LEU E 104 SHEET 4 AD7 5 VAL E 33 GLN E 38 -1 N TYR E 36 O TYR E 87 SHEET 5 AD7 5 LYS E 45 LEU E 48 -1 O LYS E 45 N GLN E 37 SHEET 1 AD8 4 SER E 9 GLY E 13 0 SHEET 2 AD8 4 THR E 102 VAL E 106 1 O THR E 105 N VAL E 11 SHEET 3 AD8 4 ALA E 84 ASP E 92 -1 N ALA E 84 O LEU E 104 SHEET 4 AD8 4 GLY E 95B PHE E 98 -1 O VAL E 97 N SER E 90 SHEET 1 AD9 3 VAL E 19 THR E 24 0 SHEET 2 AD9 3 SER E 70 ILE E 75 -1 O LEU E 73 N ILE E 21 SHEET 3 AD9 3 SER E 65 SER E 67 -1 N SER E 65 O ALA E 72 SSBOND 1 CYS A 37 CYS A 439 1555 1555 2.03 SSBOND 2 CYS A 313 CYS A 343 1555 1555 2.04 SSBOND 3 CYS A 322 CYS A 333 1555 1555 2.03 SSBOND 4 CYS A 358 CYS A 367 1555 1555 2.03 SSBOND 5 CYS A 382 CYS A 393 1555 1555 2.03 SSBOND 6 CYS A 416 CYS A 422 1555 1555 2.03 SSBOND 7 CYS H 22 CYS H 92 1555 1555 2.04 SSBOND 8 CYS L 23 CYS L 88 1555 1555 2.04 SSBOND 9 CYS B 37 CYS B 439 1555 1555 2.03 SSBOND 10 CYS B 313 CYS B 343 1555 1555 2.04 SSBOND 11 CYS B 322 CYS B 333 1555 1555 2.03 SSBOND 12 CYS B 358 CYS B 367 1555 1555 2.03 SSBOND 13 CYS B 382 CYS B 393 1555 1555 2.03 SSBOND 14 CYS B 416 CYS B 422 1555 1555 2.03 SSBOND 15 CYS F 22 CYS F 92 1555 1555 2.04 SSBOND 16 CYS G 23 CYS G 88 1555 1555 2.04 SSBOND 17 CYS C 37 CYS C 439 1555 1555 2.03 SSBOND 18 CYS C 313 CYS C 343 1555 1555 2.07 SSBOND 19 CYS C 322 CYS C 333 1555 1555 2.03 SSBOND 20 CYS C 358 CYS C 367 1555 1555 2.03 SSBOND 21 CYS C 382 CYS C 393 1555 1555 2.03 SSBOND 22 CYS C 416 CYS C 422 1555 1555 2.03 SSBOND 23 CYS D 22 CYS D 92 1555 1555 2.04 SSBOND 24 CYS E 23 CYS E 88 1555 1555 2.04 LINK ND2 ASN A 27 C1 NAG A5002 1555 1555 1.44 LINK ND2 ASN A 500 C1 NAG A5001 1555 1555 1.47 LINK ND2 ASN B 27 C1 NAG B 602 1555 1555 1.44 LINK ND2 ASN B 500 C1 NAG B 601 1555 1555 1.46 LINK ND2 ASN C 27 C1 NAG C 602 1555 1555 1.44 LINK ND2 ASN C 500 C1 NAG C 601 1555 1555 1.45 CISPEP 1 THR A 245 PRO A 246 0 0.27 CISPEP 2 THR B 245 PRO B 246 0 0.84 CISPEP 3 THR C 245 PRO C 246 0 -0.27 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000