HEADER DNA BINDING PROTEIN 26-JUL-22 8DTN TITLE THE COMPLEX OF NANOBODY 6101 WITH BCL11A ZF6 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NANOBODY 6101; COMPND 3 CHAIN: A, C, E, G; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: B-CELL LYMPHOMA/LEUKEMIA 11A; COMPND 7 CHAIN: B, D, F, H; COMPND 8 SYNONYM: BCL-11A,B-CELL CLL/LYMPHOMA 11A,COUP-TF-INTERACTING PROTEIN COMPND 9 1,ECOTROPIC VIRAL INTEGRATION SITE 9 PROTEIN HOMOLOG,EVI-9,ZINC COMPND 10 FINGER PROTEIN 856,ZF6; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 3 ORGANISM_TAXID: 9844; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_COMMON: HUMAN; SOURCE 9 ORGANISM_TAXID: 9606; SOURCE 10 GENE: BCL11A, CTIP1, EVI9, KIAA1809, ZNF856; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NANOBODY, BCL11A, TRANSCRIPTION FACTOR, ZINC FINGER DOMAIN, PROTEIN KEYWDS 2 DEGRADATION, GAMMA GLOBIN, SICKLE CELLS, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.YIN,K.TENGLIN,L.ZHAI,L.M.DASSAMA,S.H.ORKIN REVDAT 1 01-FEB-23 8DTN 0 JRNL AUTH M.YIN,M.IZADI,K.TENGLIN,T.VIENNET,L.ZHAI,G.ZHENG, JRNL AUTH 2 H.ARTHANARI,L.M.K.DASSAMA,S.H.ORKIN JRNL TITL EVOLUTION OF NANOBODIES SPECIFIC FOR BCL11A. JRNL REF PROC.NATL.ACAD.SCI.USA V. 120 59120 2023 JRNL REFN ESSN 1091-6490 JRNL PMID 36626555 JRNL DOI 10.1073/PNAS.2218959120 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.28 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 37119 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.350 REMARK 3 FREE R VALUE TEST SET COUNT : 1985 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.2780 - 5.2905 1.00 2830 164 0.1970 0.2114 REMARK 3 2 5.2905 - 4.2032 1.00 2660 151 0.1455 0.1768 REMARK 3 3 4.2032 - 3.6730 0.99 2577 148 0.1655 0.2020 REMARK 3 4 3.6730 - 3.3377 0.98 2591 146 0.1974 0.2221 REMARK 3 5 3.3377 - 3.0988 0.97 2495 138 0.2140 0.2413 REMARK 3 6 3.0988 - 2.9162 0.97 2483 140 0.2313 0.2786 REMARK 3 7 2.9162 - 2.7703 0.98 2515 140 0.2407 0.2792 REMARK 3 8 2.7703 - 2.6498 0.98 2466 138 0.2156 0.2794 REMARK 3 9 2.6498 - 2.5479 0.97 2478 137 0.2183 0.2793 REMARK 3 10 2.5479 - 2.4600 0.97 2466 136 0.2128 0.2447 REMARK 3 11 2.4600 - 2.3831 0.98 2399 133 0.2145 0.2646 REMARK 3 12 2.3831 - 2.3150 0.97 2494 143 0.2121 0.3228 REMARK 3 13 2.3150 - 2.2541 0.96 2424 139 0.2179 0.2998 REMARK 3 14 2.2541 - 2.1991 0.93 2256 132 0.2063 0.2683 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.170 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.07 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8DTN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-JUL-22. REMARK 100 THE DEPOSITION ID IS D_1000267323. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-MAR-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM 7.2.2 REMARK 200 DATA SCALING SOFTWARE : BIOMOL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37430 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.199 REMARK 200 RESOLUTION RANGE LOW (A) : 29.280 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.05494 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.1300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.6 REMARK 200 DATA REDUNDANCY IN SHELL : 7.70 REMARK 200 R MERGE FOR SHELL (I) : 0.12800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.620 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX 1.13-2998-000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS PROPANE, PH 6.0-7.0, REMARK 280 0.2 M NAKPO4 AND 18%-20% PEG 3350, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 281.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 136.20633 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 272.41267 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 272.41267 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 136.20633 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -70.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS B 797 REMARK 465 LYS D 797 REMARK 465 ARG D 826 REMARK 465 LYS H 797 REMARK 465 ARG H 826 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS F 797 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 262 O HOH C 267 2.10 REMARK 500 O HOH A 369 O HOH A 383 2.12 REMARK 500 NE ARG C 19 O HOH C 201 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 92 173.53 174.83 REMARK 500 SER B 824 -52.96 -120.99 REMARK 500 SER C 85 60.75 35.39 REMARK 500 ALA C 92 171.33 179.81 REMARK 500 ALA E 92 171.25 170.04 REMARK 500 ALA G 92 172.08 178.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 901 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 802 SG REMARK 620 2 CYS B 805 SG 113.2 REMARK 620 3 HIS B 818 NE2 100.8 108.9 REMARK 620 4 HIS B 823 NE2 110.7 117.4 104.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 901 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 802 SG REMARK 620 2 CYS D 805 SG 109.6 REMARK 620 3 HIS D 818 NE2 101.2 108.1 REMARK 620 4 HIS D 823 NE2 111.0 121.2 103.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN F 901 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS F 802 SG REMARK 620 2 CYS F 805 SG 109.0 REMARK 620 3 HIS F 818 NE2 102.1 108.3 REMARK 620 4 HIS F 823 NE2 112.4 117.7 106.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN H 901 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS H 802 SG REMARK 620 2 CYS H 805 SG 109.7 REMARK 620 3 HIS H 818 NE2 99.7 110.2 REMARK 620 4 HIS H 823 NE2 112.8 122.0 99.5 REMARK 620 N 1 2 3 DBREF 8DTN A 1 117 PDB 8DTN 8DTN 1 117 DBREF 8DTN B 797 826 UNP Q9H165 BC11A_HUMAN 797 826 DBREF 8DTN C 1 117 PDB 8DTN 8DTN 1 117 DBREF 8DTN D 797 826 UNP Q9H165 BC11A_HUMAN 797 826 DBREF 8DTN E 1 117 PDB 8DTN 8DTN 1 117 DBREF 8DTN F 797 826 UNP Q9H165 BC11A_HUMAN 797 826 DBREF 8DTN G 1 117 PDB 8DTN 8DTN 1 117 DBREF 8DTN H 797 826 UNP Q9H165 BC11A_HUMAN 797 826 SEQRES 1 A 117 ARG VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 A 117 ALA GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 A 117 PHE ILE PHE ASP SER TYR ALA MSE GLY TRP TYR ARG GLN SEQRES 4 A 117 ALA PRO GLY LYS GLU MSE GLU LEU VAL ALA ALA ILE THR SEQRES 5 A 117 SER SER GLY SER SER THR TYR TYR ALA ASP SER VAL LYS SEQRES 6 A 117 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR SEQRES 7 A 117 VAL TYR LEU GLN MSE ASN SER LEU LYS PRO GLU ASP THR SEQRES 8 A 117 ALA VAL TYR TYR CYS ALA ALA LEU ASP TYR VAL ILE ASP SEQRES 9 A 117 GLY TYR TRP GLY GLN GLY THR GLN VAL THR VAL SER SER SEQRES 1 B 30 LYS ASP VAL TYR LYS CYS GLU ILE CYS LYS MSE PRO PHE SEQRES 2 B 30 SER VAL TYR SER THR LEU GLU LYS HIS MSE LYS LYS TRP SEQRES 3 B 30 HIS SER ASP ARG SEQRES 1 C 117 ARG VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 C 117 ALA GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 C 117 PHE ILE PHE ASP SER TYR ALA MSE GLY TRP TYR ARG GLN SEQRES 4 C 117 ALA PRO GLY LYS GLU MSE GLU LEU VAL ALA ALA ILE THR SEQRES 5 C 117 SER SER GLY SER SER THR TYR TYR ALA ASP SER VAL LYS SEQRES 6 C 117 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR SEQRES 7 C 117 VAL TYR LEU GLN MSE ASN SER LEU LYS PRO GLU ASP THR SEQRES 8 C 117 ALA VAL TYR TYR CYS ALA ALA LEU ASP TYR VAL ILE ASP SEQRES 9 C 117 GLY TYR TRP GLY GLN GLY THR GLN VAL THR VAL SER SER SEQRES 1 D 30 LYS ASP VAL TYR LYS CYS GLU ILE CYS LYS MSE PRO PHE SEQRES 2 D 30 SER VAL TYR SER THR LEU GLU LYS HIS MSE LYS LYS TRP SEQRES 3 D 30 HIS SER ASP ARG SEQRES 1 E 117 ARG VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 E 117 ALA GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 E 117 PHE ILE PHE ASP SER TYR ALA MSE GLY TRP TYR ARG GLN SEQRES 4 E 117 ALA PRO GLY LYS GLU MSE GLU LEU VAL ALA ALA ILE THR SEQRES 5 E 117 SER SER GLY SER SER THR TYR TYR ALA ASP SER VAL LYS SEQRES 6 E 117 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR SEQRES 7 E 117 VAL TYR LEU GLN MSE ASN SER LEU LYS PRO GLU ASP THR SEQRES 8 E 117 ALA VAL TYR TYR CYS ALA ALA LEU ASP TYR VAL ILE ASP SEQRES 9 E 117 GLY TYR TRP GLY GLN GLY THR GLN VAL THR VAL SER SER SEQRES 1 F 30 LYS ASP VAL TYR LYS CYS GLU ILE CYS LYS MSE PRO PHE SEQRES 2 F 30 SER VAL TYR SER THR LEU GLU LYS HIS MSE LYS LYS TRP SEQRES 3 F 30 HIS SER ASP ARG SEQRES 1 G 117 ARG VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 G 117 ALA GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 G 117 PHE ILE PHE ASP SER TYR ALA MSE GLY TRP TYR ARG GLN SEQRES 4 G 117 ALA PRO GLY LYS GLU MSE GLU LEU VAL ALA ALA ILE THR SEQRES 5 G 117 SER SER GLY SER SER THR TYR TYR ALA ASP SER VAL LYS SEQRES 6 G 117 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR SEQRES 7 G 117 VAL TYR LEU GLN MSE ASN SER LEU LYS PRO GLU ASP THR SEQRES 8 G 117 ALA VAL TYR TYR CYS ALA ALA LEU ASP TYR VAL ILE ASP SEQRES 9 G 117 GLY TYR TRP GLY GLN GLY THR GLN VAL THR VAL SER SER SEQRES 1 H 30 LYS ASP VAL TYR LYS CYS GLU ILE CYS LYS MSE PRO PHE SEQRES 2 H 30 SER VAL TYR SER THR LEU GLU LYS HIS MSE LYS LYS TRP SEQRES 3 H 30 HIS SER ASP ARG MODRES 8DTN MSE B 807 MET MODIFIED RESIDUE MODRES 8DTN MSE B 819 MET MODIFIED RESIDUE MODRES 8DTN MSE D 807 MET MODIFIED RESIDUE MODRES 8DTN MSE D 819 MET MODIFIED RESIDUE MODRES 8DTN MSE F 807 MET MODIFIED RESIDUE MODRES 8DTN MSE F 819 MET MODIFIED RESIDUE MODRES 8DTN MSE H 807 MET MODIFIED RESIDUE MODRES 8DTN MSE H 819 MET MODIFIED RESIDUE HET MSE A 34 8 HET MSE A 45 8 HET MSE A 83 8 HET MSE B 807 8 HET MSE B 819 8 HET MSE C 34 8 HET MSE C 45 8 HET MSE C 83 8 HET MSE D 807 8 HET MSE D 819 8 HET MSE E 34 8 HET MSE E 45 8 HET MSE E 83 8 HET MSE F 807 8 HET MSE F 819 8 HET MSE G 34 8 HET MSE G 45 8 HET MSE G 83 8 HET MSE H 807 8 HET MSE H 819 8 HET MG A 201 1 HET ZN B 901 1 HET ZN D 901 1 HET MG E 201 1 HET MG E 202 1 HET ZN F 901 1 HET MG F 902 1 HET ZN H 901 1 HETNAM MSE SELENOMETHIONINE HETNAM MG MAGNESIUM ION HETNAM ZN ZINC ION FORMUL 1 MSE 20(C5 H11 N O2 SE) FORMUL 9 MG 4(MG 2+) FORMUL 10 ZN 4(ZN 2+) FORMUL 17 HOH *401(H2 O) HELIX 1 AA1 ILE A 28 TYR A 32 5 5 HELIX 2 AA2 LYS A 87 THR A 91 5 5 HELIX 3 AA3 ASP A 100 GLY A 105 5 6 HELIX 4 AA4 THR B 814 HIS B 823 1 10 HELIX 5 AA5 ILE C 28 TYR C 32 5 5 HELIX 6 AA6 LYS C 87 THR C 91 5 5 HELIX 7 AA7 ASP C 100 GLY C 105 5 6 HELIX 8 AA8 THR D 814 HIS D 823 1 10 HELIX 9 AA9 ILE E 28 TYR E 32 5 5 HELIX 10 AB1 ASP E 62 LYS E 65 5 4 HELIX 11 AB2 ASN E 74 LYS E 76 5 3 HELIX 12 AB3 LYS E 87 THR E 91 5 5 HELIX 13 AB4 ASP E 100 GLY E 105 5 6 HELIX 14 AB5 THR F 814 HIS F 823 1 10 HELIX 15 AB6 ILE G 28 TYR G 32 5 5 HELIX 16 AB7 ASP G 62 LYS G 65 5 4 HELIX 17 AB8 LYS G 87 THR G 91 5 5 HELIX 18 AB9 ASP G 100 GLY G 105 5 6 HELIX 19 AC1 THR H 814 HIS H 823 1 10 SHEET 1 AA1 4 GLN A 3 SER A 7 0 SHEET 2 AA1 4 LEU A 18 SER A 25 -1 O SER A 25 N GLN A 3 SHEET 3 AA1 4 THR A 78 MSE A 83 -1 O MSE A 83 N LEU A 18 SHEET 4 AA1 4 PHE A 68 ASP A 73 -1 N SER A 71 O TYR A 80 SHEET 1 AA2 6 GLY A 10 GLN A 13 0 SHEET 2 AA2 6 THR A 111 SER A 116 1 O THR A 114 N GLY A 10 SHEET 3 AA2 6 ALA A 92 ALA A 98 -1 N TYR A 94 O THR A 111 SHEET 4 AA2 6 MSE A 34 GLN A 39 -1 N GLY A 35 O ALA A 97 SHEET 5 AA2 6 GLU A 46 ILE A 51 -1 O ALA A 49 N TRP A 36 SHEET 6 AA2 6 THR A 58 TYR A 60 -1 O TYR A 59 N ALA A 50 SHEET 1 AA3 4 GLN C 3 SER C 7 0 SHEET 2 AA3 4 LEU C 18 SER C 25 -1 O SER C 25 N GLN C 3 SHEET 3 AA3 4 THR C 78 MSE C 83 -1 O LEU C 81 N LEU C 20 SHEET 4 AA3 4 PHE C 68 ASP C 73 -1 N THR C 69 O GLN C 82 SHEET 1 AA4 6 LEU C 11 GLN C 13 0 SHEET 2 AA4 6 THR C 111 SER C 116 1 O THR C 114 N VAL C 12 SHEET 3 AA4 6 ALA C 92 ALA C 98 -1 N TYR C 94 O THR C 111 SHEET 4 AA4 6 MSE C 34 GLN C 39 -1 N TYR C 37 O TYR C 95 SHEET 5 AA4 6 GLU C 46 ILE C 51 -1 O VAL C 48 N TRP C 36 SHEET 6 AA4 6 THR C 58 TYR C 60 -1 O TYR C 59 N ALA C 50 SHEET 1 AA5 4 GLN E 3 SER E 7 0 SHEET 2 AA5 4 LEU E 18 SER E 25 -1 O ALA E 23 N VAL E 5 SHEET 3 AA5 4 THR E 78 MSE E 83 -1 O MSE E 83 N LEU E 18 SHEET 4 AA5 4 PHE E 68 ASP E 73 -1 N ASP E 73 O THR E 78 SHEET 1 AA6 6 GLY E 10 GLN E 13 0 SHEET 2 AA6 6 THR E 111 SER E 116 1 O THR E 114 N VAL E 12 SHEET 3 AA6 6 ALA E 92 ALA E 98 -1 N TYR E 94 O THR E 111 SHEET 4 AA6 6 MSE E 34 GLN E 39 -1 N TYR E 37 O TYR E 95 SHEET 5 AA6 6 GLU E 46 ILE E 51 -1 O ALA E 49 N TRP E 36 SHEET 6 AA6 6 THR E 58 TYR E 60 -1 O TYR E 59 N ALA E 50 SHEET 1 AA7 4 GLN G 3 SER G 7 0 SHEET 2 AA7 4 LEU G 18 SER G 25 -1 O ALA G 23 N VAL G 5 SHEET 3 AA7 4 THR G 78 MSE G 83 -1 O MSE G 83 N LEU G 18 SHEET 4 AA7 4 PHE G 68 ASP G 73 -1 N THR G 69 O GLN G 82 SHEET 1 AA8 6 GLY G 10 GLN G 13 0 SHEET 2 AA8 6 THR G 111 SER G 116 1 O SER G 116 N VAL G 12 SHEET 3 AA8 6 ALA G 92 ALA G 98 -1 N TYR G 94 O THR G 111 SHEET 4 AA8 6 MSE G 34 GLN G 39 -1 N TYR G 37 O TYR G 95 SHEET 5 AA8 6 GLU G 46 ILE G 51 -1 O ALA G 49 N TRP G 36 SHEET 6 AA8 6 THR G 58 TYR G 60 -1 O TYR G 59 N ALA G 50 LINK C ALA A 33 N MSE A 34 1555 1555 1.34 LINK C MSE A 34 N GLY A 35 1555 1555 1.32 LINK C GLU A 44 N MSE A 45 1555 1555 1.33 LINK C MSE A 45 N GLU A 46 1555 1555 1.33 LINK C GLN A 82 N MSE A 83 1555 1555 1.33 LINK C MSE A 83 N ASN A 84 1555 1555 1.32 LINK C LYS B 806 N MSE B 807 1555 1555 1.33 LINK C MSE B 807 N PRO B 808 1555 1555 1.34 LINK C HIS B 818 N MSE B 819 1555 1555 1.33 LINK C MSE B 819 N LYS B 820 1555 1555 1.34 LINK C ALA C 33 N MSE C 34 1555 1555 1.34 LINK C MSE C 34 N GLY C 35 1555 1555 1.33 LINK C GLU C 44 N MSE C 45 1555 1555 1.32 LINK C MSE C 45 N GLU C 46 1555 1555 1.33 LINK C GLN C 82 N MSE C 83 1555 1555 1.33 LINK C MSE C 83 N ASN C 84 1555 1555 1.33 LINK C LYS D 806 N MSE D 807 1555 1555 1.33 LINK C MSE D 807 N PRO D 808 1555 1555 1.33 LINK C HIS D 818 N MSE D 819 1555 1555 1.34 LINK C MSE D 819 N LYS D 820 1555 1555 1.33 LINK C ALA E 33 N MSE E 34 1555 1555 1.33 LINK C MSE E 34 N GLY E 35 1555 1555 1.32 LINK C GLU E 44 N MSE E 45 1555 1555 1.33 LINK C MSE E 45 N GLU E 46 1555 1555 1.33 LINK C GLN E 82 N MSE E 83 1555 1555 1.32 LINK C MSE E 83 N ASN E 84 1555 1555 1.33 LINK C LYS F 806 N MSE F 807 1555 1555 1.34 LINK C MSE F 807 N PRO F 808 1555 1555 1.32 LINK C HIS F 818 N MSE F 819 1555 1555 1.34 LINK C MSE F 819 N LYS F 820 1555 1555 1.33 LINK C ALA G 33 N MSE G 34 1555 1555 1.33 LINK C MSE G 34 N GLY G 35 1555 1555 1.33 LINK C GLU G 44 N MSE G 45 1555 1555 1.33 LINK C MSE G 45 N GLU G 46 1555 1555 1.33 LINK C GLN G 82 N MSE G 83 1555 1555 1.32 LINK C MSE G 83 N ASN G 84 1555 1555 1.33 LINK C LYS H 806 N MSE H 807 1555 1555 1.32 LINK C MSE H 807 N PRO H 808 1555 1555 1.33 LINK C HIS H 818 N MSE H 819 1555 1555 1.34 LINK C MSE H 819 N LYS H 820 1555 1555 1.34 LINK SG CYS B 802 ZN ZN B 901 1555 1555 2.31 LINK SG CYS B 805 ZN ZN B 901 1555 1555 2.26 LINK NE2 HIS B 818 ZN ZN B 901 1555 1555 2.06 LINK NE2 HIS B 823 ZN ZN B 901 1555 1555 2.08 LINK SG CYS D 802 ZN ZN D 901 1555 1555 2.31 LINK SG CYS D 805 ZN ZN D 901 1555 1555 2.37 LINK NE2 HIS D 818 ZN ZN D 901 1555 1555 2.02 LINK NE2 HIS D 823 ZN ZN D 901 1555 1555 2.06 LINK SG CYS F 802 ZN ZN F 901 1555 1555 2.44 LINK SG CYS F 805 ZN ZN F 901 1555 1555 2.27 LINK NE2 HIS F 818 ZN ZN F 901 1555 1555 2.07 LINK NE2 HIS F 823 ZN ZN F 901 1555 1555 2.03 LINK SG CYS H 802 ZN ZN H 901 1555 1555 2.43 LINK SG CYS H 805 ZN ZN H 901 1555 1555 2.30 LINK NE2 HIS H 818 ZN ZN H 901 1555 1555 1.98 LINK NE2 HIS H 823 ZN ZN H 901 1555 1555 2.09 CRYST1 54.933 54.933 408.619 90.00 90.00 120.00 P 31 2 1 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018204 0.010510 0.000000 0.00000 SCALE2 0.000000 0.021020 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002447 0.00000