HEADER VIRAL PROTEIN 26-JUL-22 8DTW TITLE THE CRYSTAL STRUCTURE OF I38T MUTANT PA ENDONUCLEASE TITLE 2 (2009/H1N1/CALIFORNIA) IN COMPLEX WITH COMPOUND SJ001023036 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN PA-X; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 3 ORGANISM_TAXID: 11320; SOURCE 4 GENE: PA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEASE, INFLUENZA, INHIBITOR RESISTANCE, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.G.CUYPERS,J.P.SLAVISH,Z.RANKOVIC,S.W.WHITE REVDAT 4 03-APR-24 8DTW 1 JRNL REVDAT 3 18-OCT-23 8DTW 1 REMARK REVDAT 2 11-OCT-23 8DTW 1 JRNL REVDAT 1 21-SEP-22 8DTW 0 JRNL AUTH P.J.SLAVISH,M.G.CUYPERS,M.A.RIMMER,A.ABDOLVAHABI,T.JEEVAN, JRNL AUTH 2 G.KUMAR,J.A.JARUSIEWICZ,S.VAITHIYALINGAM,J.C.JONES, JRNL AUTH 3 J.J.BOWLING,J.E.PRICE,R.M.DUBOIS,J.MIN,R.J.WEBBY,Z.RANKOVIC, JRNL AUTH 4 S.W.WHITE JRNL TITL CHEMICAL SCAFFOLD RECYCLING: STRUCTURE-GUIDED CONVERSION OF JRNL TITL 2 AN HIV INTEGRASE INHIBITOR INTO A POTENT INFLUENZA VIRUS JRNL TITL 3 RNA-DEPENDENT RNA POLYMERASE INHIBITOR DESIGNED TO MINIMIZE JRNL TITL 4 RESISTANCE POTENTIAL. JRNL REF EUR.J.MED.CHEM. V. 247 15035 2023 JRNL REFN ISSN 0223-5234 JRNL PMID 36603507 JRNL DOI 10.1016/J.EJMECH.2022.115035 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.J.SLAVISH,M.G.CUYPERS,M.A.RIMMER,A.ABDOLVAHABI,T.JEEVAN, REMARK 1 AUTH 2 G.KUMAR,J.A.JARUSIEWICZ,S.VAITHIYALINGAM,J.C.JONES, REMARK 1 AUTH 3 J.J.BOWLING,J.E.PRICE,R.M.DUBOIS,J.MIN,R.J.WEBBY,Z.RANKOVIC, REMARK 1 AUTH 4 S.W.WHITE REMARK 1 TITL CHEMICAL SCAFFOLD RECYCLING: STRUCTURE-GUIDED CONVERSION OF REMARK 1 TITL 2 AN HIV INTEGRASE INHIBITOR INTO A POTENT INFLUENZA VIRUS REMARK 1 TITL 3 RNA-DEPENDENT RNA POLYMERASE INHIBITOR DESIGNED TO MINIMIZE REMARK 1 TITL 4 RESISTANCE POTENTIAL. REMARK 1 REF EUR.J.MED.CHEM. V. 247 15035 2023 REMARK 1 REFN ISSN 0223-5234 REMARK 1 PMID 36603507 REMARK 1 DOI 10.1016/J.EJMECH.2022.115035 REMARK 2 REMARK 2 RESOLUTION. 2.33 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.33 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.78 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 3 NUMBER OF REFLECTIONS : 11497 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.224 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.240 REMARK 3 FREE R VALUE TEST SET COUNT : 602 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.7800 - 3.7000 0.90 2699 141 0.1908 0.2443 REMARK 3 2 3.7000 - 2.9400 0.97 2750 140 0.2478 0.3233 REMARK 3 3 2.9400 - 2.5600 0.97 2716 145 0.2785 0.3023 REMARK 3 4 2.5600 - 2.3300 0.98 2730 176 0.3156 0.3570 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.430 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.095 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 68.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 80.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 1560 REMARK 3 ANGLE : 0.417 2109 REMARK 3 CHIRALITY : 0.037 219 REMARK 3 PLANARITY : 0.003 266 REMARK 3 DIHEDRAL : 13.604 227 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -3 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.9244 20.6484 7.3431 REMARK 3 T TENSOR REMARK 3 T11: 0.7588 T22: 0.5096 REMARK 3 T33: 0.7578 T12: -0.0435 REMARK 3 T13: 0.2449 T23: -0.0269 REMARK 3 L TENSOR REMARK 3 L11: 6.7402 L22: 0.4051 REMARK 3 L33: 8.2091 L12: 0.5494 REMARK 3 L13: 3.5991 L23: 0.7416 REMARK 3 S TENSOR REMARK 3 S11: 0.0291 S12: 0.5616 S13: -0.4414 REMARK 3 S21: 0.0717 S22: -0.1621 S23: 0.3860 REMARK 3 S31: 0.6702 S32: 0.2797 S33: 0.1964 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.3429 21.2180 22.1964 REMARK 3 T TENSOR REMARK 3 T11: 0.8134 T22: 0.5587 REMARK 3 T33: 0.6356 T12: -0.0319 REMARK 3 T13: 0.1337 T23: 0.2114 REMARK 3 L TENSOR REMARK 3 L11: 9.1067 L22: 3.4695 REMARK 3 L33: 5.1400 L12: -1.6893 REMARK 3 L13: 0.2197 L23: -0.2451 REMARK 3 S TENSOR REMARK 3 S11: 0.2489 S12: -0.4096 S13: -0.1510 REMARK 3 S21: 0.3790 S22: -0.3186 S23: -0.1898 REMARK 3 S31: 0.4816 S32: 0.1337 S33: 0.0556 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 127 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.5241 10.7229 27.5634 REMARK 3 T TENSOR REMARK 3 T11: 1.6438 T22: 0.9544 REMARK 3 T33: 1.0803 T12: -0.1671 REMARK 3 T13: 0.2948 T23: 0.2255 REMARK 3 L TENSOR REMARK 3 L11: 9.2430 L22: 2.8922 REMARK 3 L33: 9.3883 L12: -5.1257 REMARK 3 L13: 3.2917 L23: -1.9882 REMARK 3 S TENSOR REMARK 3 S11: 0.2727 S12: -1.6574 S13: -1.5826 REMARK 3 S21: -1.0755 S22: 0.5798 S23: 0.8955 REMARK 3 S31: 0.7184 S32: -0.8731 S33: -1.0276 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 138 THROUGH 195 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.0055 21.8956 22.1765 REMARK 3 T TENSOR REMARK 3 T11: 0.7961 T22: 0.6489 REMARK 3 T33: 0.7808 T12: -0.2065 REMARK 3 T13: 0.3107 T23: 0.0244 REMARK 3 L TENSOR REMARK 3 L11: 4.0129 L22: 0.7821 REMARK 3 L33: 5.3825 L12: -0.5243 REMARK 3 L13: 2.9889 L23: 0.2755 REMARK 3 S TENSOR REMARK 3 S11: -0.0268 S12: -0.5198 S13: -0.2161 REMARK 3 S21: 0.2569 S22: -0.2328 S23: 0.1304 REMARK 3 S31: 0.3477 S32: -0.5548 S33: 0.1610 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8DTW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JUL-22. REMARK 100 THE DEPOSITION ID IS D_1000267358. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11499 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.330 REMARK 200 RESOLUTION RANGE LOW (A) : 74.450 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.33 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.41 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5VPT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.8, 1 M AMMONIUM REMARK 280 SULFATE, 10 MM MNCL2, 10 MM MGCL2, 0.5% PVP K15, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 44.77700 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 44.77700 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 66.98150 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 44.77700 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 44.77700 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 66.98150 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 44.77700 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 44.77700 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 66.98150 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 44.77700 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 44.77700 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 66.98150 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 44.77700 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 44.77700 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 66.98150 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 44.77700 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 44.77700 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 66.98150 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 44.77700 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 44.77700 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 66.98150 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 44.77700 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 44.77700 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 66.98150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A 196 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 15 CD OE1 OE2 REMARK 470 GLU A 31 CD OE1 OE2 REMARK 470 ARG A 84 NE CZ NH1 NH2 REMARK 470 GLU A 101 CG CD OE1 OE2 REMARK 470 LYS A 104 CG CD CE NZ REMARK 470 LEU A 132 CG CD1 CD2 REMARK 470 LYS A 134 CG CD CE NZ REMARK 470 LYS A 137 CE NZ REMARK 470 LYS A 139 CG CD CE NZ REMARK 470 GLU A 141 CG CD OE1 OE2 REMARK 470 LYS A 142 CG CD CE NZ REMARK 470 LYS A 158 CD CE NZ REMARK 470 GLU A 165 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 125 -166.31 -116.26 REMARK 500 THR A 162 -65.98 59.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 QQ4 A 204 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 201 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 41 NE2 REMARK 620 2 ASP A 108 OD2 93.6 REMARK 620 3 GLU A 119 OE2 165.0 86.4 REMARK 620 4 ILE A 120 O 79.0 87.1 86.0 REMARK 620 5 TLR A 203 O13 93.2 105.5 101.3 165.6 REMARK 620 6 TLR A 203 O15 74.9 168.3 105.3 92.8 73.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 202 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 80 OE1 REMARK 620 2 ASP A 108 OD1 84.7 REMARK 620 3 TLR A 203 O10 95.2 163.2 REMARK 620 4 TLR A 203 O13 100.8 88.1 75.4 REMARK 620 5 HOH A 302 O 168.4 84.6 96.3 83.4 REMARK 620 6 HOH A 303 O 85.0 96.2 100.5 173.1 91.6 REMARK 620 N 1 2 3 4 5 DBREF 8DTW A 1 50 UNP C6H0Y9 C6H0Y9_9INFA 1 50 DBREF 8DTW A 73 196 UNP C6H0Y9 C6H0Y9_9INFA 73 196 SEQADV 8DTW MET A -19 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DTW GLY A -18 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DTW SER A -17 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DTW SER A -16 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DTW HIS A -15 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DTW HIS A -14 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DTW HIS A -13 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DTW HIS A -12 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DTW HIS A -11 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DTW HIS A -10 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DTW SER A -9 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DTW SER A -8 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DTW GLY A -7 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DTW LEU A -6 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DTW VAL A -5 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DTW PRO A -4 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DTW ARG A -3 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DTW GLY A -2 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DTW SER A -1 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DTW HIS A 0 UNP C6H0Y9 EXPRESSION TAG SEQADV 8DTW THR A 38 UNP C6H0Y9 ILE 38 ENGINEERED MUTATION SEQADV 8DTW GLY A 51 UNP C6H0Y9 LINKER SEQADV 8DTW GLY A 52 UNP C6H0Y9 LINKER SEQADV 8DTW SER A 53 UNP C6H0Y9 LINKER SEQRES 1 A 197 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 197 LEU VAL PRO ARG GLY SER HIS MET GLU ASP PHE VAL ARG SEQRES 3 A 197 GLN CYS PHE ASN PRO MET ILE VAL GLU LEU ALA GLU LYS SEQRES 4 A 197 ALA MET LYS GLU TYR GLY GLU ASP PRO LYS ILE GLU THR SEQRES 5 A 197 ASN LYS PHE ALA ALA THR CYS THR HIS LEU GLU VAL CYS SEQRES 6 A 197 PHE MET TYR SER ASP GLY GLY SER LYS HIS ARG PHE GLU SEQRES 7 A 197 ILE ILE GLU GLY ARG ASP ARG ILE MET ALA TRP THR VAL SEQRES 8 A 197 VAL ASN SER ILE CYS ASN THR THR GLY VAL GLU LYS PRO SEQRES 9 A 197 LYS PHE LEU PRO ASP LEU TYR ASP TYR LYS GLU ASN ARG SEQRES 10 A 197 PHE ILE GLU ILE GLY VAL THR ARG ARG GLU VAL HIS ILE SEQRES 11 A 197 TYR TYR LEU GLU LYS ALA ASN LYS ILE LYS SER GLU LYS SEQRES 12 A 197 THR HIS ILE HIS ILE PHE SER PHE THR GLY GLU GLU MET SEQRES 13 A 197 ALA THR LYS ALA ASP TYR THR LEU ASP GLU GLU SER ARG SEQRES 14 A 197 ALA ARG ILE LYS THR ARG LEU PHE THR ILE ARG GLN GLU SEQRES 15 A 197 MET ALA SER ARG SER LEU TRP ASP SER PHE ARG GLN SER SEQRES 16 A 197 GLU ARG HET MN A 201 1 HET MN A 202 1 HET TLR A 203 32 HET QQ4 A 204 41 HET SO4 A 205 5 HET SO4 A 206 5 HET MG A 207 1 HETNAM MN MANGANESE (II) ION HETNAM TLR 5-HYDROXY-N-[2-(2-METHOXYPYRIDIN-4-YL)ETHYL]-6-OXO-2- HETNAM 2 TLR {[2-(TRIFLUOROMETHYL)PHENYL]METHYL}-1,6- HETNAM 3 TLR DIHYDROPYRIMIDINE-4-CARBOXAMIDE HETNAM QQ4 HEXA VINYLPYRROLIDONE K15 HETNAM SO4 SULFATE ION HETNAM MG MAGNESIUM ION HETSYN QQ4 1,1',1'',1''',1'''',1'''''-[(3R,5R,7R,9S,11R)-DODECANE- HETSYN 2 QQ4 1,3,5,7,9,11-HEXAYL]HEXA(PYRROLIDIN-2-ONE) FORMUL 2 MN 2(MN 2+) FORMUL 4 TLR C21 H19 F3 N4 O4 FORMUL 5 QQ4 C36 H56 N6 O6 FORMUL 6 SO4 2(O4 S 2-) FORMUL 8 MG MG 2+ FORMUL 9 HOH *55(H2 O) HELIX 1 AA1 SER A -1 PHE A 9 1 11 HELIX 2 AA2 ASN A 10 TYR A 24 1 15 HELIX 3 AA3 GLU A 31 GLY A 51 1 21 HELIX 4 AA4 ASP A 83 GLY A 99 1 17 HELIX 5 AA5 GLU A 126 ILE A 138 1 13 HELIX 6 AA6 LYS A 158 ASP A 160 5 3 HELIX 7 AA7 ASP A 164 ARG A 185 1 22 HELIX 8 AA8 LEU A 187 GLU A 195 1 9 SHEET 1 AA1 5 PHE A 76 ILE A 78 0 SHEET 2 AA1 5 LEU A 109 ASP A 111 -1 O TYR A 110 N GLU A 77 SHEET 3 AA1 5 ARG A 116 THR A 123 -1 O ARG A 116 N ASP A 111 SHEET 4 AA1 5 HIS A 144 SER A 149 1 O HIS A 144 N PHE A 117 SHEET 5 AA1 5 GLU A 154 ALA A 156 -1 O MET A 155 N ILE A 147 LINK NE2 HIS A 41 MN MN A 201 1555 1555 2.33 LINK OE1 GLU A 80 MN MN A 202 1555 1555 2.42 LINK OD2 ASP A 108 MN MN A 201 1555 1555 2.13 LINK OD1 ASP A 108 MN MN A 202 1555 1555 2.37 LINK OE2 GLU A 119 MN MN A 201 1555 1555 2.13 LINK O ILE A 120 MN MN A 201 1555 1555 2.20 LINK MN MN A 201 O13 TLR A 203 1555 1555 2.36 LINK MN MN A 201 O15 TLR A 203 1555 1555 2.31 LINK MN MN A 202 O10 TLR A 203 1555 1555 2.25 LINK MN MN A 202 O13 TLR A 203 1555 1555 2.13 LINK MN MN A 202 O HOH A 302 1555 1555 2.08 LINK MN MN A 202 O HOH A 303 1555 1555 2.27 LINK MG MG A 207 O HOH A 318 1555 1555 2.92 CRYST1 89.554 89.554 133.963 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011166 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011166 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007465 0.00000