HEADER ELECTRON TRANSPORT 30-JUL-22 8DVX TITLE STRUCTURE OF ACETYLATED PIG SOMATIC CYTOCHROME C (ALY39) AT 1.5A COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME C; COMPND 3 CHAIN: A, B, C, D; COMPND 4 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SUS SCROFA; SOURCE 3 ORGANISM_COMMON: PIG; SOURCE 4 ORGANISM_TAXID: 9823 KEYWDS COMPLEX IV, COMPLEX III, APOPTOSIS, ISCHEMIA, SKELETAL MUSCLE, KEYWDS 2 ACETYLATION, OXIDOREDUCTASE, ELECTRON TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR B.F.P.EDWARDS,M.HUETTEMANN,A.VAISHNAV,J.BRUNZELLE,P.MORSE,J.WAN REVDAT 4 15-NOV-23 8DVX 1 REMARK REVDAT 3 25-OCT-23 8DVX 1 REMARK REVDAT 2 26-JUL-23 8DVX 1 JRNL REVDAT 1 19-JUL-23 8DVX 0 JRNL AUTH P.T.MORSE,G.PEREZ-MEJIAS,J.WAN,A.A.TURNER,I.MARQUEZ, JRNL AUTH 2 H.A.KALPAGE,A.VAISHNAV,M.P.ZUREK,P.P.HUETTEMANN,K.KIM, JRNL AUTH 3 T.ARROUM,M.A.DE LA ROSA,D.D.CHOWDHURY,I.LEE,J.S.BRUNZELLE, JRNL AUTH 4 T.H.SANDERSON,M.H.MALEK,D.MEIERHOFER,B.F.P.EDWARDS, JRNL AUTH 5 I.DIAZ-MORENO,M.HUTTEMANN JRNL TITL CYTOCHROME C LYSINE ACETYLATION REGULATES CELLULAR JRNL TITL 2 RESPIRATION AND CELL DEATH IN ISCHEMIC SKELETAL MUSCLE. JRNL REF NAT COMMUN V. 14 4166 2023 JRNL REFN ESSN 2041-1723 JRNL PMID 37443314 JRNL DOI 10.1038/S41467-023-39820-8 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.38 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 84.8 REMARK 3 NUMBER OF REFLECTIONS : 110978 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.490 REMARK 3 FREE R VALUE TEST SET COUNT : 3874 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.3800 - 4.5600 0.98 4404 160 0.1561 0.1637 REMARK 3 2 4.5600 - 3.6200 0.97 4360 160 0.1466 0.1954 REMARK 3 3 3.6200 - 3.1600 0.75 3387 116 0.1493 0.1772 REMARK 3 4 3.1600 - 2.8700 0.86 3853 149 0.1660 0.2318 REMARK 3 5 2.8700 - 2.6700 0.89 4026 142 0.1523 0.1843 REMARK 3 6 2.6700 - 2.5100 0.91 4138 152 0.1617 0.1773 REMARK 3 7 2.5100 - 2.3900 0.91 4103 138 0.1606 0.1876 REMARK 3 8 2.3900 - 2.2800 0.91 4070 145 0.1665 0.2068 REMARK 3 9 2.2800 - 2.1900 0.91 4098 159 0.1559 0.1793 REMARK 3 10 2.1900 - 2.1200 0.91 4146 152 0.1515 0.1881 REMARK 3 11 2.1200 - 2.0500 0.92 4074 150 0.1423 0.1777 REMARK 3 12 2.0500 - 1.9900 0.92 4194 155 0.1641 0.1916 REMARK 3 13 1.9900 - 1.9400 0.76 3422 122 0.1619 0.1844 REMARK 3 14 1.9400 - 1.8900 0.76 3458 122 0.1783 0.2475 REMARK 3 15 1.8900 - 1.8500 0.82 3715 139 0.1779 0.1918 REMARK 3 16 1.8500 - 1.8100 0.86 3803 122 0.1956 0.2365 REMARK 3 17 1.8100 - 1.7800 0.86 3897 150 0.1969 0.2025 REMARK 3 18 1.7800 - 1.7400 0.86 3856 148 0.2111 0.2731 REMARK 3 19 1.7400 - 1.7100 0.85 3762 150 0.2104 0.2751 REMARK 3 20 1.7100 - 1.6800 0.85 3918 125 0.2250 0.2715 REMARK 3 21 1.6800 - 1.6500 0.84 3696 141 0.2370 0.2770 REMARK 3 22 1.6500 - 1.6300 0.82 3790 123 0.2475 0.2766 REMARK 3 23 1.6300 - 1.6000 0.80 3598 140 0.2557 0.3244 REMARK 3 24 1.6000 - 1.5800 0.79 3512 128 0.2690 0.3315 REMARK 3 25 1.5800 - 1.5600 0.79 3612 124 0.2767 0.3148 REMARK 3 26 1.5600 - 1.5400 0.79 3517 130 0.2912 0.3370 REMARK 3 27 1.5400 - 1.5200 0.75 3406 97 0.2961 0.2587 REMARK 3 28 1.5200 - 1.5000 0.75 3289 135 0.3074 0.3618 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.198 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.328 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.95 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.017 3616 REMARK 3 ANGLE : 1.578 4919 REMARK 3 CHIRALITY : 0.080 452 REMARK 3 PLANARITY : 0.015 596 REMARK 3 DIHEDRAL : 14.704 492 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8DVX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1000267442. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-DEC-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.12713 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROCESS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 110978 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 49.610 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 86.9 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : 0.06500 REMARK 200 FOR THE DATA SET : 8.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.53200 REMARK 200 R SYM FOR SHELL (I) : 0.42800 REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5C0Z REMARK 200 REMARK 200 REMARK: PINK/RED BLOCKS 0.1-0.2 X 0.1 MM REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: JBS3A2: 10% PEG 4K, 20% ISO PROPANOL, REMARK 280 15% PEG 4K, 2.5 MM POTASSIUM FERRICYANIDE., PH 5.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 337 O HOH C 338 2.01 REMARK 500 O HOH A 363 O HOH A 367 2.05 REMARK 500 O HOH C 342 O HOH C 358 2.08 REMARK 500 O HOH B 391 O HOH C 364 2.08 REMARK 500 O HOH D 346 O HOH D 358 2.11 REMARK 500 O HOH C 350 O HOH D 327 2.12 REMARK 500 O HOH A 355 O HOH D 356 2.13 REMARK 500 OE2 GLU A 21 O HOH A 301 2.15 REMARK 500 O HOH B 361 O HOH B 385 2.15 REMARK 500 O HOH B 316 O HOH B 381 2.17 REMARK 500 OE1 GLU B 21 O HOH B 301 2.17 REMARK 500 O HOH D 338 O HOH D 360 2.17 REMARK 500 O HOH A 377 O HOH A 383 2.18 REMARK 500 O HOH B 376 O HOH B 377 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 354 O HOH D 322 1465 2.04 REMARK 500 O HOH B 330 O HOH D 341 1465 2.14 REMARK 500 O HOH A 345 O HOH B 308 1655 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 62 CG GLU B 62 CD 0.092 REMARK 500 GLU B 62 CD GLU B 62 OE1 0.087 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 14 -34.50 -136.20 REMARK 500 LYS A 27 -135.40 -126.79 REMARK 500 ASN A 70 84.45 -159.96 REMARK 500 LYS B 27 -132.64 -129.63 REMARK 500 ASN B 70 83.60 -163.69 REMARK 500 CYS C 14 -31.92 -131.51 REMARK 500 LYS C 27 -136.56 -134.02 REMARK 500 ASN C 70 84.50 -164.88 REMARK 500 CYS D 14 -32.64 -133.78 REMARK 500 LYS D 27 -138.73 -122.11 REMARK 500 ASN D 70 85.28 -163.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 386 DISTANCE = 5.87 ANGSTROMS REMARK 525 HOH A 387 DISTANCE = 5.89 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 18 NE2 REMARK 620 2 HEC A 201 NA 90.5 REMARK 620 3 HEC A 201 NB 86.5 94.7 REMARK 620 4 HEC A 201 NC 86.4 176.2 87.3 REMARK 620 5 HEC A 201 ND 91.6 86.1 177.9 91.7 REMARK 620 6 MET A 80 SD 176.2 85.9 95.2 97.1 86.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC B 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 18 NE2 REMARK 620 2 HEC B 201 NA 91.0 REMARK 620 3 HEC B 201 NB 87.6 89.4 REMARK 620 4 HEC B 201 NC 85.5 176.4 91.1 REMARK 620 5 HEC B 201 ND 90.7 90.1 178.2 89.3 REMARK 620 6 MET B 80 SD 176.9 86.1 93.3 97.4 88.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC C 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 18 NE2 REMARK 620 2 HEC C 201 NA 88.7 REMARK 620 3 HEC C 201 NB 90.7 88.0 REMARK 620 4 HEC C 201 NC 87.6 176.3 91.5 REMARK 620 5 HEC C 201 ND 86.3 90.4 176.6 89.9 REMARK 620 6 MET C 80 SD 173.6 86.3 93.1 97.5 89.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC D 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 18 NE2 REMARK 620 2 HEC D 201 NA 91.4 REMARK 620 3 HEC D 201 NB 87.7 92.4 REMARK 620 4 HEC D 201 NC 84.9 176.3 87.4 REMARK 620 5 HEC D 201 ND 91.0 86.9 178.6 93.1 REMARK 620 6 MET D 80 SD 176.7 85.7 94.0 98.0 87.2 REMARK 620 N 1 2 3 4 5 DBREF 8DVX A 1 104 UNP P62895 CYC_PIG 2 105 DBREF 8DVX B 1 104 UNP P62895 CYC_PIG 2 105 DBREF 8DVX C 1 104 UNP P62895 CYC_PIG 2 105 DBREF 8DVX D 1 104 UNP P62895 CYC_PIG 2 105 SEQRES 1 A 104 GLY ASP VAL GLU LYS GLY LYS LYS ILE PHE VAL GLN LYS SEQRES 2 A 104 CYS ALA GLN CYS HIS THR VAL GLU LYS GLY GLY LYS HIS SEQRES 3 A 104 LYS THR GLY PRO ASN LEU HIS GLY LEU PHE GLY ARG ALY SEQRES 4 A 104 THR GLY GLN ALA PRO GLY PHE SER TYR THR ASP ALA ASN SEQRES 5 A 104 LYS ASN LYS GLY ILE THR TRP GLY GLU GLU THR LEU MET SEQRES 6 A 104 GLU TYR LEU GLU ASN PRO LYS LYS TYR ILE PRO GLY THR SEQRES 7 A 104 LYS MET ILE PHE ALA GLY ILE LYS LYS LYS GLY GLU ARG SEQRES 8 A 104 GLU ASP LEU ILE ALA TYR LEU LYS LYS ALA THR ASN GLU SEQRES 1 B 104 GLY ASP VAL GLU LYS GLY LYS LYS ILE PHE VAL GLN LYS SEQRES 2 B 104 CYS ALA GLN CYS HIS THR VAL GLU LYS GLY GLY LYS HIS SEQRES 3 B 104 LYS THR GLY PRO ASN LEU HIS GLY LEU PHE GLY ARG ALY SEQRES 4 B 104 THR GLY GLN ALA PRO GLY PHE SER TYR THR ASP ALA ASN SEQRES 5 B 104 LYS ASN LYS GLY ILE THR TRP GLY GLU GLU THR LEU MET SEQRES 6 B 104 GLU TYR LEU GLU ASN PRO LYS LYS TYR ILE PRO GLY THR SEQRES 7 B 104 LYS MET ILE PHE ALA GLY ILE LYS LYS LYS GLY GLU ARG SEQRES 8 B 104 GLU ASP LEU ILE ALA TYR LEU LYS LYS ALA THR ASN GLU SEQRES 1 C 104 GLY ASP VAL GLU LYS GLY LYS LYS ILE PHE VAL GLN LYS SEQRES 2 C 104 CYS ALA GLN CYS HIS THR VAL GLU LYS GLY GLY LYS HIS SEQRES 3 C 104 LYS THR GLY PRO ASN LEU HIS GLY LEU PHE GLY ARG ALY SEQRES 4 C 104 THR GLY GLN ALA PRO GLY PHE SER TYR THR ASP ALA ASN SEQRES 5 C 104 LYS ASN LYS GLY ILE THR TRP GLY GLU GLU THR LEU MET SEQRES 6 C 104 GLU TYR LEU GLU ASN PRO LYS LYS TYR ILE PRO GLY THR SEQRES 7 C 104 LYS MET ILE PHE ALA GLY ILE LYS LYS LYS GLY GLU ARG SEQRES 8 C 104 GLU ASP LEU ILE ALA TYR LEU LYS LYS ALA THR ASN GLU SEQRES 1 D 104 GLY ASP VAL GLU LYS GLY LYS LYS ILE PHE VAL GLN LYS SEQRES 2 D 104 CYS ALA GLN CYS HIS THR VAL GLU LYS GLY GLY LYS HIS SEQRES 3 D 104 LYS THR GLY PRO ASN LEU HIS GLY LEU PHE GLY ARG ALY SEQRES 4 D 104 THR GLY GLN ALA PRO GLY PHE SER TYR THR ASP ALA ASN SEQRES 5 D 104 LYS ASN LYS GLY ILE THR TRP GLY GLU GLU THR LEU MET SEQRES 6 D 104 GLU TYR LEU GLU ASN PRO LYS LYS TYR ILE PRO GLY THR SEQRES 7 D 104 LYS MET ILE PHE ALA GLY ILE LYS LYS LYS GLY GLU ARG SEQRES 8 D 104 GLU ASP LEU ILE ALA TYR LEU LYS LYS ALA THR ASN GLU MODRES 8DVX ALY A 39 LYS MODIFIED RESIDUE MODRES 8DVX ALY B 39 LYS MODIFIED RESIDUE MODRES 8DVX ALY C 39 LYS MODIFIED RESIDUE MODRES 8DVX ALY D 39 LYS MODIFIED RESIDUE HET ALY A 39 12 HET ALY B 39 12 HET ALY C 39 12 HET ALY D 39 12 HET HEC A 201 43 HET FC6 A 202 13 HET FC6 A 203 13 HET HEC B 201 43 HET FC6 B 202 13 HET FC6 B 203 13 HET FC6 B 204 13 HET FC6 B 205 13 HET HEC C 201 43 HET FC6 C 202 13 HET HEC D 201 43 HETNAM ALY N(6)-ACETYLLYSINE HETNAM HEC HEME C HETNAM FC6 HEXACYANOFERRATE(3-) HETSYN FC6 FERRI(III)HEXACYANIDE FORMUL 1 ALY 4(C8 H16 N2 O3) FORMUL 5 HEC 4(C34 H34 FE N4 O4) FORMUL 6 FC6 7(C6 FE N6) FORMUL 16 HOH *305(H2 O) HELIX 1 AA1 ASP A 2 CYS A 14 1 13 HELIX 2 AA2 THR A 49 LYS A 55 1 7 HELIX 3 AA3 GLY A 60 ASN A 70 1 11 HELIX 4 AA4 ASN A 70 ILE A 75 1 6 HELIX 5 AA5 LYS A 87 THR A 102 1 16 HELIX 6 AA6 ASP B 2 CYS B 14 1 13 HELIX 7 AA7 THR B 49 LYS B 55 1 7 HELIX 8 AA8 GLY B 60 ASN B 70 1 11 HELIX 9 AA9 ASN B 70 ILE B 75 1 6 HELIX 10 AB1 LYS B 87 THR B 102 1 16 HELIX 11 AB2 ASP C 2 CYS C 14 1 13 HELIX 12 AB3 THR C 49 LYS C 55 1 7 HELIX 13 AB4 GLY C 60 ASN C 70 1 11 HELIX 14 AB5 ASN C 70 ILE C 75 1 6 HELIX 15 AB6 LYS C 87 THR C 102 1 16 HELIX 16 AB7 ASP D 2 CYS D 14 1 13 HELIX 17 AB8 THR D 49 LYS D 55 1 7 HELIX 18 AB9 GLY D 60 ASN D 70 1 11 HELIX 19 AC1 ASN D 70 ILE D 75 1 6 HELIX 20 AC2 LYS D 87 THR D 102 1 16 LINK SG CYS A 14 CAB HEC A 201 1555 1555 1.77 LINK SG CYS A 17 CAC HEC A 201 1555 1555 1.82 LINK C ARG A 38 N ALY A 39 1555 1555 1.33 LINK C ALY A 39 N THR A 40 1555 1555 1.33 LINK SG CYS B 14 CAB HEC B 201 1555 1555 1.78 LINK SG CYS B 17 CAC HEC B 201 1555 1555 1.82 LINK C ARG B 38 N ALY B 39 1555 1555 1.34 LINK C ALY B 39 N THR B 40 1555 1555 1.32 LINK SG CYS C 14 CAB HEC C 201 1555 1555 1.77 LINK SG CYS C 17 CAC HEC C 201 1555 1555 1.82 LINK C ARG C 38 N ALY C 39 1555 1555 1.34 LINK C ALY C 39 N THR C 40 1555 1555 1.34 LINK SG CYS D 14 CAB HEC D 201 1555 1555 1.76 LINK SG CYS D 17 CAC HEC D 201 1555 1555 1.82 LINK C ARG D 38 N ALY D 39 1555 1555 1.34 LINK C ALY D 39 N THR D 40 1555 1555 1.33 LINK NE2 HIS A 18 FE HEC A 201 1555 1555 1.99 LINK SD MET A 80 FE HEC A 201 1555 1555 2.26 LINK NE2 HIS B 18 FE HEC B 201 1555 1555 2.00 LINK SD MET B 80 FE HEC B 201 1555 1555 2.32 LINK NE2 HIS C 18 FE HEC C 201 1555 1555 2.05 LINK SD MET C 80 FE HEC C 201 1555 1555 2.28 LINK NE2 HIS D 18 FE HEC D 201 1555 1555 2.02 LINK SD MET D 80 FE HEC D 201 1555 1555 2.35 CRYST1 34.662 54.559 61.782 65.97 87.40 84.07 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028850 -0.002997 -0.000105 0.00000 SCALE2 0.000000 0.018427 -0.008165 0.00000 SCALE3 0.000000 0.000000 0.017722 0.00000