HEADER HYDROLASE 08-AUG-22 8E07 TITLE CRYSTAL STRUCTURE OF HPSE P6 IN COMPLEX WITH TRIOSE PENTOSAN INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEPARANASE 50 KDA SUBUNIT; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: HEPARANASE 8 KDA SUBUNIT; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HPSE, HEP, HPA, HPA1, HPR1, HPSE1, HSE1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: HPSE, HEP, HPA, HPA1, HPR1, HPSE1, HSE1; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 83333 KEYWDS HEPARANASE, HEPARAN SULFATE, HYDROLASE, PENTOSAN POLYSULFATE SODIUM EXPDTA X-RAY DIFFRACTION AUTHOR C.WHITEFIELD,C.J.JACKSON REVDAT 5 20-NOV-24 8E07 1 REMARK REVDAT 4 15-NOV-23 8E07 1 REMARK REVDAT 3 25-OCT-23 8E07 1 REMARK REVDAT 2 02-AUG-23 8E07 1 JRNL REMARK REVDAT 1 12-JUL-23 8E07 0 JRNL AUTH C.WHITEFIELD,Y.VO,B.D.SCHWARTZ,C.HEPBURN,F.H.AHMED,H.ONAGI, JRNL AUTH 2 M.G.BANWELL,K.NELMS,L.R.MALINS,C.J.JACKSON JRNL TITL COMPLEX INHIBITORY MECHANISM OF GLYCOMIMETICS WITH JRNL TITL 2 HEPARANASE. JRNL REF BIOCHEMISTRY V. 62 2202 2023 JRNL REFN ISSN 0006-2960 JRNL PMID 37368361 JRNL DOI 10.1021/ACS.BIOCHEM.3C00038 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.91 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 53145 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2713 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.9100 - 4.8000 1.00 2861 156 0.1671 0.1672 REMARK 3 2 4.8000 - 3.8100 1.00 2756 140 0.1341 0.1641 REMARK 3 3 3.8100 - 3.3300 1.00 2684 157 0.1503 0.1925 REMARK 3 4 3.3300 - 3.0300 1.00 2683 162 0.1753 0.2266 REMARK 3 5 3.0300 - 2.8100 1.00 2670 159 0.1793 0.2153 REMARK 3 6 2.8100 - 2.6400 1.00 2688 133 0.1812 0.2148 REMARK 3 7 2.6400 - 2.5100 1.00 2651 143 0.1780 0.2066 REMARK 3 8 2.5100 - 2.4000 1.00 2658 129 0.1899 0.2330 REMARK 3 9 2.4000 - 2.3100 1.00 2648 137 0.1806 0.2340 REMARK 3 10 2.3100 - 2.2300 0.99 2636 138 0.2029 0.2478 REMARK 3 11 2.2300 - 2.1600 1.00 2645 135 0.1828 0.2085 REMARK 3 12 2.1600 - 2.1000 0.99 2605 138 0.1847 0.1986 REMARK 3 13 2.1000 - 2.0400 0.99 2638 132 0.1857 0.2168 REMARK 3 14 2.0400 - 1.9900 1.00 2641 136 0.1868 0.1997 REMARK 3 15 1.9900 - 1.9500 0.99 2600 158 0.1979 0.2264 REMARK 3 16 1.9500 - 1.9100 0.98 2541 151 0.2271 0.2741 REMARK 3 17 1.9100 - 1.8700 1.00 2640 133 0.2123 0.2390 REMARK 3 18 1.8700 - 1.8300 0.98 2606 129 0.1983 0.2196 REMARK 3 19 1.8300 - 1.8000 0.99 2581 147 0.2111 0.2742 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3912 REMARK 3 ANGLE : 0.846 5336 REMARK 3 CHIRALITY : 0.057 586 REMARK 3 PLANARITY : 0.006 658 REMARK 3 DIHEDRAL : 13.174 1424 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8E07 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1000265933. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53337 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 46.910 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 10.50 REMARK 200 R MERGE (I) : 0.09200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 10.80 REMARK 200 R MERGE FOR SHELL (I) : 0.94400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7RG8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM SULFATE, SODIUM ACETATE REMARK 280 PH 5.5, 20% PEG 4000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.76800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.48250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.09750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.48250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.76800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.09750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -206.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 157 REMARK 465 LYS A 158 REMARK 465 MET B 18 REMARK 465 GLY B 19 REMARK 465 SER B 20 REMARK 465 SER B 21 REMARK 465 HIS B 22 REMARK 465 HIS B 23 REMARK 465 HIS B 24 REMARK 465 HIS B 25 REMARK 465 HIS B 26 REMARK 465 HIS B 27 REMARK 465 SER B 28 REMARK 465 GLN B 29 REMARK 465 ASP B 30 REMARK 465 PRO B 31 REMARK 465 ASN B 32 REMARK 465 SER B 33 REMARK 465 SER B 34 REMARK 465 SER B 35 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU A 511 O HOH A 701 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 272 -143.95 68.41 REMARK 500 GLU A 343 115.36 -171.99 REMARK 500 SER A 345 -164.92 -166.66 REMARK 500 LEU A 355 -55.36 -137.44 REMARK 500 LEU A 419 -160.75 -106.33 REMARK 500 LEU A 419 -156.94 -106.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1003 DISTANCE = 7.34 ANGSTROMS REMARK 525 HOH B 265 DISTANCE = 7.23 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8E08 RELATED DB: PDB REMARK 900 8E08 CONTAINS THE SAME PROTEIN WITH A DIFFERENT PENTOSAN DBREF 8E07 A 158 543 UNP Q9Y251 HPSE_HUMAN 158 543 DBREF 8E07 B 36 109 UNP Q9Y251 HPSE_HUMAN 36 109 SEQADV 8E07 MET A 157 UNP Q9Y251 INITIATING METHIONINE SEQADV 8E07 LYS A 178 UNP Q9Y251 ASN 178 ENGINEERED MUTATION SEQADV 8E07 SER A 195 UNP Q9Y251 ALA 195 ENGINEERED MUTATION SEQADV 8E07 GLY A 197 UNP Q9Y251 LEU 197 ENGINEERED MUTATION SEQADV 8E07 ALA A 212 UNP Q9Y251 SER 212 ENGINEERED MUTATION SEQADV 8E07 ASP A 219 UNP Q9Y251 SER 219 ENGINEERED MUTATION SEQADV 8E07 ARG A 230 UNP Q9Y251 LEU 230 ENGINEERED MUTATION SEQADV 8E07 GLY A 234 UNP Q9Y251 ASP 234 ENGINEERED MUTATION SEQADV 8E07 LYS A 244 UNP Q9Y251 GLU 244 ENGINEERED MUTATION SEQADV 8E07 HIS A 248 UNP Q9Y251 GLN 248 ENGINEERED MUTATION SEQADV 8E07 GLY A 273 UNP Q9Y251 ARG 273 ENGINEERED MUTATION SEQADV 8E07 ALA A 292 UNP Q9Y251 SER 292 ENGINEERED MUTATION SEQADV 8E07 LEU A 307 UNP Q9Y251 LYS 307 ENGINEERED MUTATION SEQADV 8E07 THR A 318 UNP Q9Y251 ILE 318 ENGINEERED MUTATION SEQADV 8E07 GLN A 322 UNP Q9Y251 SER 322 ENGINEERED MUTATION SEQADV 8E07 LEU A 327 UNP Q9Y251 PHE 327 ENGINEERED MUTATION SEQADV 8E07 GLY A 354 UNP Q9Y251 LEU 354 ENGINEERED MUTATION SEQADV 8E07 GLN A 426 UNP Q9Y251 SER 426 ENGINEERED MUTATION SEQADV 8E07 ASP A 427 UNP Q9Y251 LYS 427 ENGINEERED MUTATION SEQADV 8E07 GLN A 477 UNP Q9Y251 LYS 477 ENGINEERED MUTATION SEQADV 8E07 HIS A 483 UNP Q9Y251 LEU 483 ENGINEERED MUTATION SEQADV 8E07 ASP A 486 UNP Q9Y251 HIS 486 ENGINEERED MUTATION SEQADV 8E07 GLN A 498 UNP Q9Y251 LEU 498 ENGINEERED MUTATION SEQADV 8E07 LYS A 512 UNP Q9Y251 MET 512 ENGINEERED MUTATION SEQADV 8E07 PRO A 513 UNP Q9Y251 GLU 513 ENGINEERED MUTATION SEQADV 8E07 ALA A 530 UNP Q9Y251 SER 530 ENGINEERED MUTATION SEQADV 8E07 PRO A 540 UNP Q9Y251 ALA 540 ENGINEERED MUTATION SEQADV 8E07 MET B 18 UNP Q9Y251 INITIATING METHIONINE SEQADV 8E07 GLY B 19 UNP Q9Y251 EXPRESSION TAG SEQADV 8E07 SER B 20 UNP Q9Y251 EXPRESSION TAG SEQADV 8E07 SER B 21 UNP Q9Y251 EXPRESSION TAG SEQADV 8E07 HIS B 22 UNP Q9Y251 EXPRESSION TAG SEQADV 8E07 HIS B 23 UNP Q9Y251 EXPRESSION TAG SEQADV 8E07 HIS B 24 UNP Q9Y251 EXPRESSION TAG SEQADV 8E07 HIS B 25 UNP Q9Y251 EXPRESSION TAG SEQADV 8E07 HIS B 26 UNP Q9Y251 EXPRESSION TAG SEQADV 8E07 HIS B 27 UNP Q9Y251 EXPRESSION TAG SEQADV 8E07 SER B 28 UNP Q9Y251 EXPRESSION TAG SEQADV 8E07 GLN B 29 UNP Q9Y251 EXPRESSION TAG SEQADV 8E07 ASP B 30 UNP Q9Y251 EXPRESSION TAG SEQADV 8E07 PRO B 31 UNP Q9Y251 EXPRESSION TAG SEQADV 8E07 ASN B 32 UNP Q9Y251 EXPRESSION TAG SEQADV 8E07 SER B 33 UNP Q9Y251 EXPRESSION TAG SEQADV 8E07 SER B 34 UNP Q9Y251 EXPRESSION TAG SEQADV 8E07 SER B 35 UNP Q9Y251 EXPRESSION TAG SEQRES 1 A 387 MET LYS LYS PHE LYS ASN SER THR TYR SER ARG SER SER SEQRES 2 A 387 VAL ASP VAL LEU TYR THR PHE ALA LYS CYS SER GLY LEU SEQRES 3 A 387 ASP LEU ILE PHE GLY LEU ASN ALA LEU LEU ARG THR SER SEQRES 4 A 387 ASP GLY GLN TRP ASN SER SER ASN ALA GLN LEU LEU LEU SEQRES 5 A 387 ASP TYR CYS ALA SER LYS GLY TYR ASN ILE ASP TRP GLU SEQRES 6 A 387 LEU GLY ASN GLU PRO ASN SER PHE ARG LYS LYS ALA GLY SEQRES 7 A 387 ILE PHE ILE ASN GLY SER GLN LEU GLY LYS ASP PHE ILE SEQRES 8 A 387 HIS LEU HIS LYS LEU LEU ARG LYS SER THR PHE LYS ASN SEQRES 9 A 387 ALA LYS LEU TYR GLY PRO ASP VAL GLY GLN PRO ARG GLY SEQRES 10 A 387 LYS THR ALA LYS MET LEU LYS SER PHE LEU LYS ALA GLY SEQRES 11 A 387 GLY GLU VAL ILE ASP ALA VAL THR TRP HIS HIS TYR TYR SEQRES 12 A 387 LEU ASN GLY ARG THR ALA THR LEU GLU ASP PHE LEU ASN SEQRES 13 A 387 PRO ASP VAL LEU ASP THR PHE ILE SER GLN VAL GLN LYS SEQRES 14 A 387 VAL LEU GLN VAL VAL GLU SER THR ARG PRO GLY LYS LYS SEQRES 15 A 387 VAL TRP LEU GLY GLU THR SER SER ALA TYR GLY GLY GLY SEQRES 16 A 387 ALA PRO GLY LEU SER ASP THR PHE ALA ALA GLY PHE MET SEQRES 17 A 387 TRP LEU ASP LYS LEU GLY LEU SER ALA ARG MET GLY ILE SEQRES 18 A 387 GLU VAL VAL MET ARG GLN VAL PHE PHE GLY ALA GLY ASN SEQRES 19 A 387 TYR HIS LEU VAL ASP GLU ASN PHE ASP PRO LEU PRO ASP SEQRES 20 A 387 TYR TRP LEU SER LEU LEU PHE LYS LYS LEU VAL GLY THR SEQRES 21 A 387 LYS VAL LEU MET ALA SER VAL GLN GLY GLN ASP ARG ARG SEQRES 22 A 387 LYS LEU ARG VAL TYR LEU HIS CYS THR ASN THR ASP ASN SEQRES 23 A 387 PRO ARG TYR LYS GLU GLY ASP LEU THR LEU TYR ALA ILE SEQRES 24 A 387 ASN LEU HIS ASN VAL THR LYS TYR LEU ARG LEU PRO TYR SEQRES 25 A 387 PRO PHE SER ASN LYS GLN VAL ASP GLN TYR LEU LEU ARG SEQRES 26 A 387 PRO HIS GLY PRO ASP GLY LEU LEU SER LYS SER VAL GLN SEQRES 27 A 387 LEU ASN GLY GLN THR LEU LYS MET VAL ASP ASP GLN THR SEQRES 28 A 387 LEU PRO PRO LEU LYS PRO LYS PRO LEU ARG PRO GLY SER SEQRES 29 A 387 SER LEU GLY LEU PRO ALA PHE SER TYR ALA PHE PHE VAL SEQRES 30 A 387 ILE ARG ASN ALA LYS VAL PRO ALA CYS ILE SEQRES 1 B 92 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ASP SEQRES 2 B 92 PRO ASN SER SER SER GLN ASP VAL VAL ASP LEU ASP PHE SEQRES 3 B 92 PHE THR GLN GLU PRO LEU HIS LEU VAL SER PRO SER PHE SEQRES 4 B 92 LEU SER VAL THR ILE ASP ALA ASN LEU ALA THR ASP PRO SEQRES 5 B 92 ARG PHE LEU ILE LEU LEU GLY SER PRO LYS LEU ARG THR SEQRES 6 B 92 LEU ALA ARG GLY LEU SER PRO ALA TYR LEU ARG PHE GLY SEQRES 7 B 92 GLY THR LYS THR ASP PHE LEU ILE PHE ASP PRO LYS LYS SEQRES 8 B 92 GLU HET XY6 C 1 18 HET XY6 C 2 17 HET XY9 C 3 21 HET XY6 F 1 18 HET XY6 F 2 17 HET XY9 F 3 21 HET ACT A 601 7 HET SO4 A 602 5 HET SO4 A 603 5 HET NH4 A 604 1 HET SO4 A 605 5 HET SO4 A 606 5 HET SO4 A 607 5 HETNAM XY6 2,3-DI-O-SULFO-BETA-D-XYLOPYRANOSE HETNAM XY9 2,3,4-TRI-O-SULFO-BETA-D-XYLOPYRANOSE HETNAM ACT ACETATE ION HETNAM SO4 SULFATE ION HETNAM NH4 AMMONIUM ION FORMUL 3 XY6 4(C5 H10 O11 S2) FORMUL 3 XY9 2(C5 H10 O14 S3) FORMUL 5 ACT C2 H3 O2 1- FORMUL 6 SO4 5(O4 S 2-) FORMUL 8 NH4 H4 N 1+ FORMUL 12 HOH *368(H2 O) HELIX 1 AA1 SER A 166 SER A 180 1 15 HELIX 2 AA2 SER A 201 LYS A 214 1 14 HELIX 3 AA3 GLU A 225 ASN A 227 5 3 HELIX 4 AA4 SER A 228 GLY A 234 1 7 HELIX 5 AA5 ASN A 238 SER A 256 1 19 HELIX 6 AA6 ALA A 276 GLY A 287 1 12 HELIX 7 AA7 GLU A 288 ILE A 290 5 3 HELIX 8 AA8 THR A 306 LEU A 311 1 6 HELIX 9 AA9 ASN A 312 ARG A 334 1 23 HELIX 10 AB1 THR A 358 ALA A 360 5 3 HELIX 11 AB2 ALA A 361 GLY A 376 1 16 HELIX 12 AB3 LEU A 401 LEU A 413 1 13 HELIX 13 AB4 ASP A 486 SER A 490 5 5 HELIX 14 AB5 ASN B 64 ASP B 68 5 5 HELIX 15 AB6 ARG B 70 GLY B 76 1 7 HELIX 16 AB7 SER B 77 LEU B 87 1 11 HELIX 17 AB8 GLY B 96 ASP B 100 5 5 SHEET 1 AA1 2 SER A 163 TYR A 165 0 SHEET 2 AA1 2 LEU B 102 PHE B 104 1 O ILE B 103 N SER A 163 SHEET 1 AA2 9 LEU A 182 LEU A 188 0 SHEET 2 AA2 9 ASP A 219 LEU A 222 1 O GLU A 221 N LEU A 188 SHEET 3 AA2 9 LEU A 263 VAL A 268 1 O TYR A 264 N TRP A 220 SHEET 4 AA2 9 ALA A 292 ASN A 301 1 O HIS A 296 N VAL A 268 SHEET 5 AA2 9 VAL A 339 TYR A 348 1 O TRP A 340 N VAL A 293 SHEET 6 AA2 9 VAL A 379 ARG A 382 1 O MET A 381 N LEU A 341 SHEET 7 AA2 9 LEU B 57 ASP B 62 1 O SER B 58 N VAL A 380 SHEET 8 AA2 9 ALA B 90 GLY B 95 1 O ARG B 93 N ILE B 61 SHEET 9 AA2 9 LEU A 182 LEU A 188 1 N ILE A 185 O PHE B 94 SHEET 1 AA3 4 GLN A 498 THR A 499 0 SHEET 2 AA3 4 VAL A 493 LEU A 495 -1 N LEU A 495 O GLN A 498 SHEET 3 AA3 4 VAL A 475 PRO A 482 -1 N ARG A 481 O GLN A 494 SHEET 4 AA3 4 LYS A 514 LEU A 516 -1 O LEU A 516 N VAL A 475 SHEET 1 AA4 8 GLN A 498 THR A 499 0 SHEET 2 AA4 8 VAL A 493 LEU A 495 -1 N LEU A 495 O GLN A 498 SHEET 3 AA4 8 VAL A 475 PRO A 482 -1 N ARG A 481 O GLN A 494 SHEET 4 AA4 8 SER A 528 ILE A 534 -1 O PHE A 531 N TYR A 478 SHEET 5 AA4 8 LEU A 450 ASN A 456 -1 N LEU A 452 O PHE A 532 SHEET 6 AA4 8 LEU A 431 THR A 438 -1 N HIS A 436 O THR A 451 SHEET 7 AA4 8 VAL A 414 VAL A 418 -1 N GLY A 415 O CYS A 437 SHEET 8 AA4 8 HIS B 50 LEU B 51 -1 O HIS B 50 N VAL A 418 SHEET 1 AA5 4 MET A 420 VAL A 423 0 SHEET 2 AA5 4 VAL B 38 PHE B 44 -1 O PHE B 44 N MET A 420 SHEET 3 AA5 4 LYS A 462 ARG A 465 1 N TYR A 463 O VAL B 39 SHEET 4 AA5 4 LEU A 522 LEU A 524 -1 O LEU A 522 N LEU A 464 SSBOND 1 CYS A 437 CYS A 542 1555 1555 2.04 LINK O4 XY6 C 1 C1 XY6 C 2 1555 1555 1.43 LINK O4 XY6 C 2 C1 XY9 C 3 1555 1555 1.40 LINK O4 XY6 F 1 C1 XY6 F 2 1555 1555 1.43 LINK O4 XY6 F 2 C1 XY9 F 3 1555 1555 1.41 CISPEP 1 GLY A 265 PRO A 266 0 3.24 CISPEP 2 GLN A 383 VAL A 384 0 -8.30 CISPEP 3 TYR A 468 PRO A 469 0 2.67 CISPEP 4 SER B 88 PRO B 89 0 -2.27 CRYST1 59.536 76.195 124.965 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016796 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013124 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008002 0.00000