HEADER METAL TRANSPORT 22-AUG-22 8E6L TITLE X-RAY STRUCTURE OF THE DEINOCOCCUS RADIODURANS NRAMP/MNTH DIVALENT TITLE 2 TRANSITION METAL TRANSPORTER D296A MUTANT IN AN INWARD-OPEN, TITLE 3 MANGANESE-BOUND STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIVALENT METAL CATION TRANSPORTER MNTH; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DEINOCOCCUS RADIODURANS; SOURCE 3 ORGANISM_TAXID: 1299; SOURCE 4 GENE: MNTH, DR_1709; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MEMBRANE PROTEIN, DIVALENT TRANSITION METAL IMPORTER, LEUT FOLD, KEYWDS 2 NRAMP FAMILY, METAL TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR S.RAY,R.GAUDET REVDAT 2 25-OCT-23 8E6L 1 REMARK REVDAT 1 03-MAY-23 8E6L 0 JRNL AUTH S.RAY,S.P.BERRY,E.A.WILSON,C.H.ZHANG,M.SHEKHAR,A.SINGHAROY, JRNL AUTH 2 R.GAUDET JRNL TITL HIGH-RESOLUTION STRUCTURES WITH BOUND MN 2+ AND CD 2+ MAP JRNL TITL 2 THE METAL IMPORT PATHWAY IN AN NRAMP TRANSPORTER. JRNL REF ELIFE V. 12 2023 JRNL REFN ESSN 2050-084X JRNL PMID 37039477 JRNL DOI 10.7554/ELIFE.84006 REMARK 2 REMARK 2 RESOLUTION. 3.12 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.12 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.32 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.5 REMARK 3 NUMBER OF REFLECTIONS : 6997 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 13.010 REMARK 3 FREE R VALUE TEST SET COUNT : 910 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.3200 - 5.9700 0.85 886 133 0.1783 0.2361 REMARK 3 2 5.9600 - 4.7400 0.90 885 132 0.2159 0.2301 REMARK 3 3 4.7400 - 4.1400 0.89 856 128 0.1999 0.2455 REMARK 3 4 4.1400 - 3.7600 0.91 868 130 0.2281 0.3009 REMARK 3 5 3.7600 - 3.4900 0.91 874 131 0.2504 0.3186 REMARK 3 6 3.4900 - 3.2800 0.91 855 127 0.2601 0.3252 REMARK 3 7 3.2800 - 3.1200 0.91 863 129 0.2887 0.3426 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.430 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.580 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 63.48 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 68.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 45 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.1280 -24.4647 29.4070 REMARK 3 T TENSOR REMARK 3 T11: 0.2145 T22: 0.2602 REMARK 3 T33: 0.6341 T12: 0.0778 REMARK 3 T13: 0.1169 T23: -0.1425 REMARK 3 L TENSOR REMARK 3 L11: 2.6687 L22: 2.6184 REMARK 3 L33: 0.8783 L12: -0.5014 REMARK 3 L13: 0.5251 L23: -1.4997 REMARK 3 S TENSOR REMARK 3 S11: 0.3866 S12: 0.0505 S13: -0.0978 REMARK 3 S21: -0.0870 S22: -0.3060 S23: 0.6959 REMARK 3 S31: 0.0977 S32: -0.0260 S33: 0.2051 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 71 THROUGH 146 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.5788 -14.2713 17.4525 REMARK 3 T TENSOR REMARK 3 T11: 0.2214 T22: 0.3147 REMARK 3 T33: 0.7052 T12: -0.0268 REMARK 3 T13: -0.0097 T23: -0.1115 REMARK 3 L TENSOR REMARK 3 L11: 0.3164 L22: 2.4080 REMARK 3 L33: 2.1814 L12: -0.4891 REMARK 3 L13: 0.4498 L23: -2.2747 REMARK 3 S TENSOR REMARK 3 S11: 0.5000 S12: 0.2317 S13: -0.2069 REMARK 3 S21: -0.4967 S22: -0.1692 S23: 0.9090 REMARK 3 S31: 0.3925 S32: 0.2698 S33: -0.1532 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 147 THROUGH 171 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.6576 -19.1490 23.0967 REMARK 3 T TENSOR REMARK 3 T11: 0.2749 T22: 1.0497 REMARK 3 T33: 0.5923 T12: -0.1002 REMARK 3 T13: 0.1429 T23: 0.1983 REMARK 3 L TENSOR REMARK 3 L11: 5.3278 L22: 2.4770 REMARK 3 L33: 1.7686 L12: 0.2934 REMARK 3 L13: -0.3237 L23: -1.0388 REMARK 3 S TENSOR REMARK 3 S11: 0.2030 S12: 0.4266 S13: -0.0015 REMARK 3 S21: -0.1562 S22: -0.3856 S23: -0.2985 REMARK 3 S31: -0.0113 S32: 0.5648 S33: 0.2453 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 172 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.6044 -30.8569 33.4067 REMARK 3 T TENSOR REMARK 3 T11: 0.4197 T22: 0.2152 REMARK 3 T33: 0.5717 T12: 0.0270 REMARK 3 T13: 0.1054 T23: -0.1557 REMARK 3 L TENSOR REMARK 3 L11: 1.2312 L22: 3.4289 REMARK 3 L33: 2.2132 L12: -1.3783 REMARK 3 L13: 0.8824 L23: -1.7084 REMARK 3 S TENSOR REMARK 3 S11: 0.2744 S12: 0.1179 S13: -0.0069 REMARK 3 S21: 0.2457 S22: 0.2431 S23: 0.8584 REMARK 3 S31: 0.0403 S32: -0.1188 S33: -0.3644 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 215 THROUGH 249 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.3899 -16.0093 22.6265 REMARK 3 T TENSOR REMARK 3 T11: 0.3634 T22: 0.2555 REMARK 3 T33: 0.6494 T12: 0.0043 REMARK 3 T13: -0.0246 T23: -0.0401 REMARK 3 L TENSOR REMARK 3 L11: 2.9012 L22: 3.1504 REMARK 3 L33: 2.1255 L12: 0.4074 REMARK 3 L13: 1.0982 L23: -2.0235 REMARK 3 S TENSOR REMARK 3 S11: 0.2832 S12: 0.2832 S13: -0.1314 REMARK 3 S21: 0.2736 S22: 0.2308 S23: 0.6760 REMARK 3 S31: -0.1008 S32: 0.5717 S33: -0.4381 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 250 THROUGH 299 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.7047 -27.4262 26.7698 REMARK 3 T TENSOR REMARK 3 T11: 0.4530 T22: 0.4824 REMARK 3 T33: 0.6120 T12: -0.0188 REMARK 3 T13: -0.0970 T23: -0.1164 REMARK 3 L TENSOR REMARK 3 L11: 1.3422 L22: 2.1979 REMARK 3 L33: 2.4784 L12: -0.3532 REMARK 3 L13: -0.1938 L23: -2.2027 REMARK 3 S TENSOR REMARK 3 S11: 0.2854 S12: 0.1214 S13: 0.0456 REMARK 3 S21: -0.4778 S22: 0.1415 S23: 0.9356 REMARK 3 S31: 0.1276 S32: -0.0834 S33: -0.4977 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 300 THROUGH 397 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.4249 -15.5011 23.5061 REMARK 3 T TENSOR REMARK 3 T11: 0.1933 T22: 0.4565 REMARK 3 T33: 0.4316 T12: -0.0199 REMARK 3 T13: 0.0242 T23: -0.0748 REMARK 3 L TENSOR REMARK 3 L11: 0.3369 L22: 1.4603 REMARK 3 L33: 2.7492 L12: -0.0827 REMARK 3 L13: 0.0604 L23: -1.8383 REMARK 3 S TENSOR REMARK 3 S11: 0.3748 S12: -0.0628 S13: 0.0241 REMARK 3 S21: -0.0719 S22: -0.2588 S23: 0.3292 REMARK 3 S31: -0.3148 S32: 0.9385 S33: 0.0298 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 398 THROUGH 436 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.6995 -11.8070 17.8955 REMARK 3 T TENSOR REMARK 3 T11: 0.4649 T22: 0.5449 REMARK 3 T33: 0.9725 T12: 0.1122 REMARK 3 T13: -0.1728 T23: 0.5083 REMARK 3 L TENSOR REMARK 3 L11: 0.8563 L22: 1.2165 REMARK 3 L33: 1.5187 L12: -0.4386 REMARK 3 L13: 0.3783 L23: -1.2644 REMARK 3 S TENSOR REMARK 3 S11: 0.1289 S12: -0.2852 S13: -0.4466 REMARK 3 S21: 0.1024 S22: 0.6340 S23: 0.9104 REMARK 3 S31: 0.0799 S32: -0.9508 S33: 0.4347 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8E6L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1000267912. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-SEP-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7042 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.110 REMARK 200 RESOLUTION RANGE LOW (A) : 45.320 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.7 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.34200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.11 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 1.81700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 8E5S REMARK 200 REMARK 200 REMARK: 30 MICRON IN SIZE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28% PEG400, 0.1 M HEPES, PH 6.8, 0.1 M REMARK 280 SODIUM CHLORIDE, 10 MM MANGANESE CHLORIDE, LIPIDIC CUBIC PHASE, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.82000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.44750 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.82000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 49.44750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 23 REMARK 465 HIS A 24 REMARK 465 HIS A 25 REMARK 465 HIS A 26 REMARK 465 HIS A 27 REMARK 465 HIS A 28 REMARK 465 HIS A 29 REMARK 465 HIS A 30 REMARK 465 HIS A 31 REMARK 465 ALA A 32 REMARK 465 GLY A 33 REMARK 465 PRO A 34 REMARK 465 ARG A 35 REMARK 465 GLY A 36 REMARK 465 VAL A 37 REMARK 465 ARG A 38 REMARK 465 ARG A 39 REMARK 465 ILE A 40 REMARK 465 LEU A 41 REMARK 465 PRO A 42 REMARK 465 LEU A 240 REMARK 465 THR A 241 REMARK 465 GLN A 242 REMARK 465 GLY A 243 REMARK 465 ARG A 244 REMARK 465 ILE A 245 REMARK 465 GLN A 246 REMARK 465 THR A 247 REMARK 465 ASP A 248 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 43 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU A 44 CG CD1 CD2 REMARK 470 GLN A 168 CG CD OE1 NE2 REMARK 470 LYS A 169 CG CD CE NZ REMARK 470 ARG A 170 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 173 CG CD NE CZ NH1 NH2 REMARK 470 THR A 249 OG1 CG2 REMARK 470 GLU A 251 CG CD OE1 OE2 REMARK 470 ARG A 255 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 210 80.21 -66.44 REMARK 500 MET A 230 84.52 56.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 621 DISTANCE = 5.96 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 OLC A 504 REMARK 610 OLC A 506 REMARK 610 OLC A 509 REMARK 610 OLC A 510 REMARK 610 OLC A 511 REMARK 610 OLC A 512 REMARK 610 OLC A 513 REMARK 610 OLC A 514 REMARK 610 OLC A 515 REMARK 610 OLC A 516 REMARK 610 OLC A 517 REMARK 610 OLC A 518 REMARK 610 OLC A 519 REMARK 610 OLC A 520 REMARK 610 OLC A 521 REMARK 610 OLC A 522 REMARK 610 OLC A 523 REMARK 610 OLC A 524 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 501 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 56 OD1 REMARK 620 2 ASN A 59 OD1 58.4 REMARK 620 3 ALA A 227 O 134.4 83.2 REMARK 620 4 MET A 230 SD 124.0 159.1 83.6 REMARK 620 5 HOH A 608 O 60.9 72.8 86.5 90.3 REMARK 620 N 1 2 3 4 DBREF 8E6L A 32 436 UNP Q9RTP8 MNTH_DEIRA 32 436 SEQADV 8E6L MET A 23 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E6L HIS A 24 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E6L HIS A 25 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E6L HIS A 26 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E6L HIS A 27 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E6L HIS A 28 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E6L HIS A 29 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E6L HIS A 30 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E6L HIS A 31 UNP Q9RTP8 EXPRESSION TAG SEQADV 8E6L ALA A 296 UNP Q9RTP8 ASP 296 ENGINEERED MUTATION SEQRES 1 A 414 MET HIS HIS HIS HIS HIS HIS HIS HIS ALA GLY PRO ARG SEQRES 2 A 414 GLY VAL ARG ARG ILE LEU PRO PHE LEU GLY PRO ALA VAL SEQRES 3 A 414 ILE ALA SER ILE ALA TYR MET ASP PRO GLY ASN PHE ALA SEQRES 4 A 414 THR ASN ILE GLU GLY GLY ALA ARG TYR GLY TYR SER LEU SEQRES 5 A 414 LEU TRP VAL ILE LEU ALA ALA ASN LEU MET ALA MET VAL SEQRES 6 A 414 ILE GLN ASN LEU SER ALA ASN LEU GLY ILE ALA SER GLY SEQRES 7 A 414 ARG ASN LEU PRO GLU LEU ILE ARG GLU ARG TRP PRO ARG SEQRES 8 A 414 PRO LEU VAL TRP PHE TYR TRP ILE GLN ALA GLU LEU VAL SEQRES 9 A 414 ALA MET ALA THR ASP LEU ALA GLU PHE LEU GLY ALA ALA SEQRES 10 A 414 LEU ALA ILE GLN LEU LEU THR GLY LEU PRO MET PHE TRP SEQRES 11 A 414 GLY ALA VAL VAL THR GLY VAL VAL THR PHE TRP LEU LEU SEQRES 12 A 414 ASN LEU GLN LYS ARG GLY THR ARG PRO LEU GLU LEU ALA SEQRES 13 A 414 VAL GLY ALA PHE VAL LEU MET ILE GLY VAL ALA TYR LEU SEQRES 14 A 414 VAL GLN VAL VAL LEU ALA ARG PRO ASP LEU ALA ALA VAL SEQRES 15 A 414 GLY ALA GLY PHE VAL PRO ARG LEU GLN GLY PRO GLY SER SEQRES 16 A 414 ALA TYR LEU ALA VAL GLY ILE ILE GLY ALA THR VAL MET SEQRES 17 A 414 PRO HIS VAL ILE TYR LEU HIS SER ALA LEU THR GLN GLY SEQRES 18 A 414 ARG ILE GLN THR ASP THR THR GLU GLU LYS ARG ARG LEU SEQRES 19 A 414 VAL ARG LEU ASN ARG VAL ASP VAL ILE ALA ALA MET GLY SEQRES 20 A 414 LEU ALA GLY LEU ILE ASN MET SER MET LEU ALA VAL ALA SEQRES 21 A 414 ALA ALA THR PHE HIS GLY LYS ASN VAL GLU ASN ALA GLY SEQRES 22 A 414 ALA LEU THR THR ALA TYR GLN THR LEU THR PRO LEU LEU SEQRES 23 A 414 GLY PRO ALA ALA SER VAL LEU PHE ALA VAL ALA LEU LEU SEQRES 24 A 414 ALA SER GLY LEU SER SER SER ALA VAL GLY THR MET ALA SEQRES 25 A 414 GLY ASP VAL ILE MET GLN GLY PHE MET GLY PHE HIS ILE SEQRES 26 A 414 PRO LEU TRP LEU ARG ARG LEU ILE THR MET LEU PRO ALA SEQRES 27 A 414 PHE ILE VAL ILE LEU LEU GLY MET ASP PRO SER SER VAL SEQRES 28 A 414 LEU ILE LEU SER GLN VAL ILE LEU CYS PHE GLY VAL PRO SEQRES 29 A 414 PHE ALA LEU VAL PRO LEU LEU LEU PHE THR ALA ARG ARG SEQRES 30 A 414 ASP VAL MET GLY ALA LEU VAL THR ARG ARG SER PHE THR SEQRES 31 A 414 VAL ILE GLY TRP VAL ILE ALA VAL ILE ILE ILE ALA LEU SEQRES 32 A 414 ASN GLY TYR LEU LEU TRP GLU LEU LEU GLY GLY HET MN A 501 1 HET CL A 502 1 HET CL A 503 1 HET OLC A 504 20 HET OLC A 505 25 HET OLC A 506 14 HET OLC A 507 25 HET OLC A 508 25 HET OLC A 509 15 HET OLC A 510 9 HET OLC A 511 14 HET OLC A 512 15 HET OLC A 513 16 HET OLC A 514 14 HET OLC A 515 15 HET OLC A 516 15 HET OLC A 517 12 HET OLC A 518 9 HET OLC A 519 13 HET OLC A 520 16 HET OLC A 521 12 HET OLC A 522 9 HET OLC A 523 16 HET OLC A 524 5 HET GOL A 525 6 HETNAM MN MANGANESE (II) ION HETNAM CL CHLORIDE ION HETNAM OLC (2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE HETNAM GOL GLYCEROL HETSYN OLC 1-OLEOYL-R-GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 MN MN 2+ FORMUL 3 CL 2(CL 1-) FORMUL 5 OLC 21(C21 H40 O4) FORMUL 26 GOL C3 H8 O3 FORMUL 27 HOH *21(H2 O) HELIX 1 AA1 GLY A 45 MET A 55 1 11 HELIX 2 AA2 ASP A 56 ARG A 69 1 14 HELIX 3 AA3 TYR A 70 SER A 73 5 4 HELIX 4 AA4 LEU A 74 GLY A 100 1 27 HELIX 5 AA5 ASN A 102 TRP A 111 1 10 HELIX 6 AA6 PRO A 112 THR A 146 1 35 HELIX 7 AA7 PRO A 149 ASN A 166 1 18 HELIX 8 AA8 THR A 172 ALA A 197 1 26 HELIX 9 AA9 ASP A 200 ALA A 206 1 7 HELIX 10 AB1 GLY A 207 VAL A 209 5 3 HELIX 11 AB2 GLY A 214 MET A 230 1 17 HELIX 12 AB3 MET A 230 TYR A 235 1 6 HELIX 13 AB4 THR A 250 PHE A 286 1 37 HELIX 14 AB5 THR A 299 THR A 303 5 5 HELIX 15 AB6 LEU A 304 GLY A 309 1 6 HELIX 16 AB7 ALA A 311 GLY A 344 1 34 HELIX 17 AB8 PRO A 348 GLY A 367 1 20 HELIX 18 AB9 ASP A 369 THR A 396 1 28 HELIX 19 AC1 ARG A 398 GLY A 403 1 6 HELIX 20 AC2 ARG A 408 GLY A 436 1 29 LINK OD1 ASP A 56 MN MN A 501 1555 1555 2.72 LINK OD1 ASN A 59 MN MN A 501 1555 1555 2.45 LINK O ALA A 227 MN MN A 501 1555 1555 2.24 LINK SD MET A 230 MN MN A 501 1555 1555 2.71 LINK MN MN A 501 O HOH A 608 1555 1555 2.32 CRYST1 58.514 71.640 98.895 90.00 90.00 90.00 P 2 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017090 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013959 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010112 0.00000