HEADER TRANSFERASE 26-AUG-22 8E9C TITLE CRYSTAL STRUCTURE OF E. COLI ASPARTATE AMINOTRANSFERASE MUTANT AIFS IN TITLE 2 THE LIGAND-FREE FORM AT 100 K COMPND MOL_ID: 1; COMPND 2 MOLECULE: ASPARTATE AMINOTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ASPAT,TRANSAMINASE A; COMPND 5 EC: 2.6.1.1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 OTHER_DETAILS: PLP COFACTOR FORMS COVALENT IMINE BOND WITH CATALYTIC COMPND 9 LYSINE (K248) EPSILON AMINO GROUP SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: ASPC, B0928, JW0911; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ENZYME, DESIGNED PROTEIN, MUTANT PROTEIN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.A.CHICA,A.D.ST-JACQUES,J.M.RODRIGUEZ,M.C.THOMPSON REVDAT 3 18-OCT-23 8E9C 1 REMARK REVDAT 2 11-OCT-23 8E9C 1 JRNL REVDAT 1 02-NOV-22 8E9C 0 JRNL AUTH A.D.ST-JACQUES,J.M.RODRIGUEZ,M.G.EASON,S.M.FOSTER,S.T.KHAN, JRNL AUTH 2 A.M.DAMRY,N.K.GOTO,M.C.THOMPSON,R.A.CHICA JRNL TITL COMPUTATIONAL REMODELING OF AN ENZYME CONFORMATIONAL JRNL TITL 2 LANDSCAPE FOR ALTERED SUBSTRATE SELECTIVITY. JRNL REF NAT COMMUN V. 14 6058 2023 JRNL REFN ESSN 2041-1723 JRNL PMID 37770431 JRNL DOI 10.1038/S41467-023-41762-0 REMARK 2 REMARK 2 RESOLUTION. 2.18 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.18 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 67.54 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 48281 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.100 REMARK 3 FREE R VALUE TEST SET COUNT : 4875 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 10.0000 - 6.7700 1.00 1520 154 0.1714 0.1714 REMARK 3 2 6.7700 - 5.3800 1.00 1465 176 0.1826 0.2222 REMARK 3 3 5.3700 - 4.7000 1.00 1477 159 0.1585 0.1759 REMARK 3 4 4.7000 - 4.2700 1.00 1452 167 0.1479 0.1773 REMARK 3 5 4.2700 - 3.9600 1.00 1474 146 0.1541 0.1759 REMARK 3 6 3.9600 - 3.7300 1.00 1422 183 0.1605 0.2065 REMARK 3 7 3.7300 - 3.5400 1.00 1464 145 0.1714 0.1978 REMARK 3 8 3.5400 - 3.3900 1.00 1467 158 0.1813 0.2073 REMARK 3 9 3.3900 - 3.2600 1.00 1453 159 0.1825 0.2229 REMARK 3 10 3.2600 - 3.1400 1.00 1450 163 0.1881 0.2062 REMARK 3 11 3.1400 - 3.0500 1.00 1442 173 0.1993 0.2516 REMARK 3 12 3.0500 - 2.9600 1.00 1425 169 0.2021 0.2704 REMARK 3 13 2.9600 - 2.8800 1.00 1420 190 0.1998 0.2400 REMARK 3 14 2.8800 - 2.8100 1.00 1448 155 0.2122 0.2799 REMARK 3 15 2.8100 - 2.7500 1.00 1460 170 0.2171 0.2828 REMARK 3 16 2.7500 - 2.6900 1.00 1424 162 0.2096 0.2598 REMARK 3 17 2.6900 - 2.6300 1.00 1433 159 0.2073 0.2411 REMARK 3 18 2.6300 - 2.5800 1.00 1421 168 0.2105 0.2474 REMARK 3 19 2.5800 - 2.5400 1.00 1461 152 0.2091 0.2601 REMARK 3 20 2.5400 - 2.5000 1.00 1459 162 0.2139 0.2685 REMARK 3 21 2.5000 - 2.4600 1.00 1440 160 0.2163 0.2649 REMARK 3 22 2.4600 - 2.4200 1.00 1419 169 0.2417 0.2976 REMARK 3 23 2.4200 - 2.3800 1.00 1468 150 0.2340 0.2747 REMARK 3 24 2.3800 - 2.3500 1.00 1449 156 0.2402 0.3335 REMARK 3 25 2.3500 - 2.3200 1.00 1438 145 0.2478 0.2869 REMARK 3 26 2.3200 - 2.2900 1.00 1460 131 0.2395 0.2498 REMARK 3 27 2.2900 - 2.2600 1.00 1453 164 0.2580 0.2947 REMARK 3 28 2.2600 - 2.2300 1.00 1404 170 0.2715 0.3480 REMARK 3 29 2.2300 - 2.2000 1.00 1430 182 0.2768 0.3273 REMARK 3 30 2.2000 - 2.1800 1.00 1408 178 0.3184 0.3546 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.302 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.183 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 6168 REMARK 3 ANGLE : 0.535 8388 REMARK 3 CHIRALITY : 0.039 924 REMARK 3 PLANARITY : 0.003 1111 REMARK 3 DIHEDRAL : 20.440 2198 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -2 THROUGH 46 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.2757 -6.3965 5.3829 REMARK 3 T TENSOR REMARK 3 T11: 0.6098 T22: 0.5107 REMARK 3 T33: 0.3705 T12: -0.1414 REMARK 3 T13: 0.2258 T23: 0.0537 REMARK 3 L TENSOR REMARK 3 L11: 2.6780 L22: 2.8045 REMARK 3 L33: 1.4227 L12: -0.4493 REMARK 3 L13: 1.7393 L23: 0.6496 REMARK 3 S TENSOR REMARK 3 S11: 0.1425 S12: -0.4056 S13: -0.4559 REMARK 3 S21: 0.0271 S22: -0.2105 S23: 0.4213 REMARK 3 S31: 0.4239 S32: -0.2950 S33: -0.0275 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 47 THROUGH 300 ) REMARK 3 ORIGIN FOR THE GROUP (A): 58.9324 19.2208 -3.2280 REMARK 3 T TENSOR REMARK 3 T11: 0.3004 T22: 0.2306 REMARK 3 T33: 0.3374 T12: -0.0115 REMARK 3 T13: -0.0263 T23: -0.0165 REMARK 3 L TENSOR REMARK 3 L11: 1.4592 L22: 1.6516 REMARK 3 L33: 2.3872 L12: -0.6589 REMARK 3 L13: -0.2558 L23: 0.5464 REMARK 3 S TENSOR REMARK 3 S11: -0.0328 S12: 0.0117 S13: 0.1697 REMARK 3 S21: 0.0517 S22: 0.0400 S23: -0.1541 REMARK 3 S31: -0.1153 S32: 0.1493 S33: -0.0068 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 301 THROUGH 331 ) REMARK 3 ORIGIN FOR THE GROUP (A): 77.1119 9.8261 8.8645 REMARK 3 T TENSOR REMARK 3 T11: 0.3807 T22: 0.4385 REMARK 3 T33: 0.3742 T12: -0.0117 REMARK 3 T13: -0.0821 T23: 0.0026 REMARK 3 L TENSOR REMARK 3 L11: 4.3774 L22: 9.7293 REMARK 3 L33: 4.8148 L12: -4.7313 REMARK 3 L13: -2.2450 L23: 4.8259 REMARK 3 S TENSOR REMARK 3 S11: -0.3416 S12: -0.2766 S13: 0.5334 REMARK 3 S21: 0.2608 S22: 0.3369 S23: -0.2548 REMARK 3 S31: 0.1268 S32: 0.5302 S33: -0.0204 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 332 THROUGH 396 ) REMARK 3 ORIGIN FOR THE GROUP (A): 73.5314 -6.4789 0.4861 REMARK 3 T TENSOR REMARK 3 T11: 0.4628 T22: 0.4961 REMARK 3 T33: 0.3274 T12: -0.0146 REMARK 3 T13: -0.0872 T23: 0.0292 REMARK 3 L TENSOR REMARK 3 L11: 4.1513 L22: 4.4081 REMARK 3 L33: 7.4537 L12: 0.0466 REMARK 3 L13: 1.7562 L23: -1.4528 REMARK 3 S TENSOR REMARK 3 S11: 0.2768 S12: 0.0600 S13: -0.0921 REMARK 3 S21: -0.4859 S22: 0.1956 S23: 0.4486 REMARK 3 S31: 1.0160 S32: -0.8370 S33: -0.3734 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -2 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.9346 31.4521 -3.3187 REMARK 3 T TENSOR REMARK 3 T11: 0.4825 T22: 0.2865 REMARK 3 T33: 0.4037 T12: 0.1119 REMARK 3 T13: -0.0063 T23: 0.0767 REMARK 3 L TENSOR REMARK 3 L11: 5.1614 L22: 6.5418 REMARK 3 L33: 4.0827 L12: -2.5506 REMARK 3 L13: -1.7904 L23: 5.1645 REMARK 3 S TENSOR REMARK 3 S11: 0.2178 S12: 0.5495 S13: -0.3977 REMARK 3 S21: -0.1534 S22: -0.3372 S23: 0.5981 REMARK 3 S31: -0.2854 S32: -0.4637 S33: 0.0719 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 23 THROUGH 46 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.2348 33.6798 20.9983 REMARK 3 T TENSOR REMARK 3 T11: 0.6766 T22: 0.5236 REMARK 3 T33: 0.4491 T12: 0.0624 REMARK 3 T13: 0.1737 T23: -0.0230 REMARK 3 L TENSOR REMARK 3 L11: 3.3793 L22: 5.1522 REMARK 3 L33: 0.2796 L12: -3.2669 REMARK 3 L13: 0.2891 L23: 0.4323 REMARK 3 S TENSOR REMARK 3 S11: -0.3803 S12: -0.0556 S13: -0.1507 REMARK 3 S21: 0.2995 S22: 0.7164 S23: -0.0262 REMARK 3 S31: 0.2049 S32: 0.4449 S33: -0.3188 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 47 THROUGH 300 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.7286 7.8277 11.1250 REMARK 3 T TENSOR REMARK 3 T11: 0.4981 T22: 0.2470 REMARK 3 T33: 0.5010 T12: -0.0594 REMARK 3 T13: 0.1515 T23: -0.0570 REMARK 3 L TENSOR REMARK 3 L11: 1.1878 L22: 1.4989 REMARK 3 L33: 1.4117 L12: -0.8685 REMARK 3 L13: -0.6304 L23: 0.6672 REMARK 3 S TENSOR REMARK 3 S11: -0.3256 S12: 0.0381 S13: -0.4069 REMARK 3 S21: 0.3716 S22: -0.0293 S23: 0.4404 REMARK 3 S31: 0.4245 S32: -0.1698 S33: 0.1875 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 301 THROUGH 396 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.2658 30.2841 21.4561 REMARK 3 T TENSOR REMARK 3 T11: 0.4074 T22: 0.3228 REMARK 3 T33: 0.3556 T12: -0.0198 REMARK 3 T13: 0.1431 T23: -0.0601 REMARK 3 L TENSOR REMARK 3 L11: 2.5004 L22: 4.5861 REMARK 3 L33: 1.1073 L12: -2.5825 REMARK 3 L13: -0.1425 L23: 0.5487 REMARK 3 S TENSOR REMARK 3 S11: -0.2567 S12: 0.0753 S13: -0.1700 REMARK 3 S21: 0.0189 S22: -0.0087 S23: 0.2626 REMARK 3 S31: 0.1860 S32: -0.0405 S33: 0.1988 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8E9C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1000268039. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUN-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1158 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : DIALS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48326 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.180 REMARK 200 RESOLUTION RANGE LOW (A) : 67.540 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 20.00 REMARK 200 R MERGE (I) : 0.12600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.18 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.22 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 38.60 REMARK 200 R MERGE FOR SHELL (I) : 3.55300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1X28 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, HEPES, PEG-400, REMARK 280 MALEATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 40.46000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 40.46000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 40.46000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -63.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -9 REMARK 465 ALA A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 PRO A 12 REMARK 465 ILE A 13 REMARK 465 LEU A 14 REMARK 465 GLY A 15 REMARK 465 LEU A 16 REMARK 465 ALA A 17 REMARK 465 ASP A 18 REMARK 465 LEU A 19 REMARK 465 LEU A 31 REMARK 465 GLY A 32 REMARK 465 ILE A 33 REMARK 465 GLY A 34 REMARK 465 ALA A 35 REMARK 465 TYR A 36 REMARK 465 ILE A 37 REMARK 465 ASP A 38 REMARK 465 GLU A 39 REMARK 465 THR A 40 REMARK 465 GLY A 41 REMARK 465 LYS A 42 REMARK 465 PHE A 43 REMARK 465 MET B -9 REMARK 465 ALA B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 21 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 24 CG CD OE1 OE2 REMARK 470 LYS A 85 CG CD CE NZ REMARK 470 LYS A 121 CG CD CE NZ REMARK 470 GLU A 192 CG CD OE1 OE2 REMARK 470 LYS A 355 CG CD CE NZ REMARK 470 GLU A 356 CG CD OE1 OE2 REMARK 470 ARG A 362 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 16 CG CD1 CD2 REMARK 470 ARG B 21 CG CD NE CZ NH1 NH2 REMARK 470 THR B 40 OG1 CG2 REMARK 470 LYS B 42 CG CD CE NZ REMARK 470 LYS B 85 CG CD CE NZ REMARK 470 LYS B 121 CG CD CE NZ REMARK 470 GLU B 153 CG CD OE1 OE2 REMARK 470 GLU B 192 CG CD OE1 OE2 REMARK 470 LYS B 236 CG CD CE NZ REMARK 470 GLU B 331 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH12 ARG B 322 OG SER B 349 1.57 REMARK 500 O HOH A 504 O HOH B 571 1.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 21 -22.95 90.78 REMARK 500 GLU A 24 69.85 -104.69 REMARK 500 TYR A 149 -46.63 -152.90 REMARK 500 ALA A 218 -72.01 -86.10 REMARK 500 ARG A 254 72.28 64.40 REMARK 500 ASN A 282 -73.06 -104.50 REMARK 500 SER A 284 -63.05 80.25 REMARK 500 TYR B 149 -59.09 -158.75 REMARK 500 ARG B 219 -32.93 -134.63 REMARK 500 LEU B 250 43.31 -107.56 REMARK 500 ARG B 254 75.49 58.63 REMARK 500 ASN B 282 -72.64 -116.25 REMARK 500 SER B 284 -61.50 78.45 REMARK 500 REMARK 500 REMARK: NULL DBREF 8E9C A 2 396 UNP P00509 AAT_ECOLI 2 396 DBREF 8E9C B 2 396 UNP P00509 AAT_ECOLI 2 396 SEQADV 8E9C MET A -9 UNP P00509 INITIATING METHIONINE SEQADV 8E9C ALA A -8 UNP P00509 EXPRESSION TAG SEQADV 8E9C HIS A -7 UNP P00509 EXPRESSION TAG SEQADV 8E9C HIS A -6 UNP P00509 EXPRESSION TAG SEQADV 8E9C HIS A -5 UNP P00509 EXPRESSION TAG SEQADV 8E9C HIS A -4 UNP P00509 EXPRESSION TAG SEQADV 8E9C HIS A -3 UNP P00509 EXPRESSION TAG SEQADV 8E9C HIS A -2 UNP P00509 EXPRESSION TAG SEQADV 8E9C VAL A -1 UNP P00509 EXPRESSION TAG SEQADV 8E9C GLY A 0 UNP P00509 EXPRESSION TAG SEQADV 8E9C THR A 1 UNP P00509 EXPRESSION TAG SEQADV 8E9C ALA A 35 UNP P00509 VAL 35 ENGINEERED MUTATION SEQADV 8E9C ILE A 37 UNP P00509 LYS 37 ENGINEERED MUTATION SEQADV 8E9C PHE A 43 UNP P00509 THR 43 ENGINEERED MUTATION SEQADV 8E9C SER A 64 UNP P00509 ASN 64 ENGINEERED MUTATION SEQADV 8E9C MET B -9 UNP P00509 INITIATING METHIONINE SEQADV 8E9C ALA B -8 UNP P00509 EXPRESSION TAG SEQADV 8E9C HIS B -7 UNP P00509 EXPRESSION TAG SEQADV 8E9C HIS B -6 UNP P00509 EXPRESSION TAG SEQADV 8E9C HIS B -5 UNP P00509 EXPRESSION TAG SEQADV 8E9C HIS B -4 UNP P00509 EXPRESSION TAG SEQADV 8E9C HIS B -3 UNP P00509 EXPRESSION TAG SEQADV 8E9C HIS B -2 UNP P00509 EXPRESSION TAG SEQADV 8E9C VAL B -1 UNP P00509 EXPRESSION TAG SEQADV 8E9C GLY B 0 UNP P00509 EXPRESSION TAG SEQADV 8E9C THR B 1 UNP P00509 EXPRESSION TAG SEQADV 8E9C ALA B 35 UNP P00509 VAL 35 ENGINEERED MUTATION SEQADV 8E9C ILE B 37 UNP P00509 LYS 37 ENGINEERED MUTATION SEQADV 8E9C PHE B 43 UNP P00509 THR 43 ENGINEERED MUTATION SEQADV 8E9C SER B 64 UNP P00509 ASN 64 ENGINEERED MUTATION SEQRES 1 A 406 MET ALA HIS HIS HIS HIS HIS HIS VAL GLY THR PHE GLU SEQRES 2 A 406 ASN ILE THR ALA ALA PRO ALA ASP PRO ILE LEU GLY LEU SEQRES 3 A 406 ALA ASP LEU PHE ARG ALA ASP GLU ARG PRO GLY LYS ILE SEQRES 4 A 406 ASN LEU GLY ILE GLY ALA TYR ILE ASP GLU THR GLY LYS SEQRES 5 A 406 PHE PRO VAL LEU THR SER VAL LYS LYS ALA GLU GLN TYR SEQRES 6 A 406 LEU LEU GLU ASN GLU THR THR LYS SER TYR LEU GLY ILE SEQRES 7 A 406 ASP GLY ILE PRO GLU PHE GLY ARG CYS THR GLN GLU LEU SEQRES 8 A 406 LEU PHE GLY LYS GLY SER ALA LEU ILE ASN ASP LYS ARG SEQRES 9 A 406 ALA ARG THR ALA GLN THR PRO GLY GLY THR GLY ALA LEU SEQRES 10 A 406 ARG VAL ALA ALA ASP PHE LEU ALA LYS ASN THR SER VAL SEQRES 11 A 406 LYS ARG VAL TRP VAL SER ASN PRO SER TRP PRO ASN HIS SEQRES 12 A 406 LYS SER VAL PHE ASN SER ALA GLY LEU GLU VAL ARG GLU SEQRES 13 A 406 TYR ALA TYR TYR ASP ALA GLU ASN HIS THR LEU ASP PHE SEQRES 14 A 406 ASP ALA LEU ILE ASN SER LEU ASN GLU ALA GLN ALA GLY SEQRES 15 A 406 ASP VAL VAL LEU PHE HIS GLY CYS CYS HIS ASN PRO THR SEQRES 16 A 406 GLY ILE ASP PRO THR LEU GLU GLN TRP GLN THR LEU ALA SEQRES 17 A 406 GLN LEU SER VAL GLU LYS GLY TRP LEU PRO LEU PHE ASP SEQRES 18 A 406 PHE ALA TYR GLN GLY PHE ALA ARG GLY LEU GLU GLU ASP SEQRES 19 A 406 ALA GLU GLY LEU ARG ALA PHE ALA ALA MET HIS LYS GLU SEQRES 20 A 406 LEU ILE VAL ALA SER SER TYR SER LYS ASN PHE GLY LEU SEQRES 21 A 406 TYR ASN GLU ARG VAL GLY ALA CYS THR LEU VAL ALA ALA SEQRES 22 A 406 ASP SER GLU THR VAL ASP ARG ALA PHE SER GLN MET LYS SEQRES 23 A 406 ALA ALA ILE ARG ALA ASN TYR SER ASN PRO PRO ALA HIS SEQRES 24 A 406 GLY ALA SER VAL VAL ALA THR ILE LEU SER ASN ASP ALA SEQRES 25 A 406 LEU ARG ALA ILE TRP GLU GLN GLU LEU THR ASP MET ARG SEQRES 26 A 406 GLN ARG ILE GLN ARG MET ARG GLN LEU PHE VAL ASN THR SEQRES 27 A 406 LEU GLN GLU LYS GLY ALA ASN ARG ASP PHE SER PHE ILE SEQRES 28 A 406 ILE LYS GLN ASN GLY MET PHE SER PHE SER GLY LEU THR SEQRES 29 A 406 LYS GLU GLN VAL LEU ARG LEU ARG GLU GLU PHE GLY VAL SEQRES 30 A 406 TYR ALA VAL ALA SER GLY ARG VAL ASN VAL ALA GLY MET SEQRES 31 A 406 THR PRO ASP ASN MET ALA PRO LEU CYS GLU ALA ILE VAL SEQRES 32 A 406 ALA VAL LEU SEQRES 1 B 406 MET ALA HIS HIS HIS HIS HIS HIS VAL GLY THR PHE GLU SEQRES 2 B 406 ASN ILE THR ALA ALA PRO ALA ASP PRO ILE LEU GLY LEU SEQRES 3 B 406 ALA ASP LEU PHE ARG ALA ASP GLU ARG PRO GLY LYS ILE SEQRES 4 B 406 ASN LEU GLY ILE GLY ALA TYR ILE ASP GLU THR GLY LYS SEQRES 5 B 406 PHE PRO VAL LEU THR SER VAL LYS LYS ALA GLU GLN TYR SEQRES 6 B 406 LEU LEU GLU ASN GLU THR THR LYS SER TYR LEU GLY ILE SEQRES 7 B 406 ASP GLY ILE PRO GLU PHE GLY ARG CYS THR GLN GLU LEU SEQRES 8 B 406 LEU PHE GLY LYS GLY SER ALA LEU ILE ASN ASP LYS ARG SEQRES 9 B 406 ALA ARG THR ALA GLN THR PRO GLY GLY THR GLY ALA LEU SEQRES 10 B 406 ARG VAL ALA ALA ASP PHE LEU ALA LYS ASN THR SER VAL SEQRES 11 B 406 LYS ARG VAL TRP VAL SER ASN PRO SER TRP PRO ASN HIS SEQRES 12 B 406 LYS SER VAL PHE ASN SER ALA GLY LEU GLU VAL ARG GLU SEQRES 13 B 406 TYR ALA TYR TYR ASP ALA GLU ASN HIS THR LEU ASP PHE SEQRES 14 B 406 ASP ALA LEU ILE ASN SER LEU ASN GLU ALA GLN ALA GLY SEQRES 15 B 406 ASP VAL VAL LEU PHE HIS GLY CYS CYS HIS ASN PRO THR SEQRES 16 B 406 GLY ILE ASP PRO THR LEU GLU GLN TRP GLN THR LEU ALA SEQRES 17 B 406 GLN LEU SER VAL GLU LYS GLY TRP LEU PRO LEU PHE ASP SEQRES 18 B 406 PHE ALA TYR GLN GLY PHE ALA ARG GLY LEU GLU GLU ASP SEQRES 19 B 406 ALA GLU GLY LEU ARG ALA PHE ALA ALA MET HIS LYS GLU SEQRES 20 B 406 LEU ILE VAL ALA SER SER TYR SER LYS ASN PHE GLY LEU SEQRES 21 B 406 TYR ASN GLU ARG VAL GLY ALA CYS THR LEU VAL ALA ALA SEQRES 22 B 406 ASP SER GLU THR VAL ASP ARG ALA PHE SER GLN MET LYS SEQRES 23 B 406 ALA ALA ILE ARG ALA ASN TYR SER ASN PRO PRO ALA HIS SEQRES 24 B 406 GLY ALA SER VAL VAL ALA THR ILE LEU SER ASN ASP ALA SEQRES 25 B 406 LEU ARG ALA ILE TRP GLU GLN GLU LEU THR ASP MET ARG SEQRES 26 B 406 GLN ARG ILE GLN ARG MET ARG GLN LEU PHE VAL ASN THR SEQRES 27 B 406 LEU GLN GLU LYS GLY ALA ASN ARG ASP PHE SER PHE ILE SEQRES 28 B 406 ILE LYS GLN ASN GLY MET PHE SER PHE SER GLY LEU THR SEQRES 29 B 406 LYS GLU GLN VAL LEU ARG LEU ARG GLU GLU PHE GLY VAL SEQRES 30 B 406 TYR ALA VAL ALA SER GLY ARG VAL ASN VAL ALA GLY MET SEQRES 31 B 406 THR PRO ASP ASN MET ALA PRO LEU CYS GLU ALA ILE VAL SEQRES 32 B 406 ALA VAL LEU HET PLP A 401 22 HET SO4 A 402 5 HET SO4 B 401 5 HET PLP B 402 22 HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETNAM SO4 SULFATE ION HETSYN PLP VITAMIN B6 PHOSPHATE FORMUL 3 PLP 2(C8 H10 N O6 P) FORMUL 4 SO4 2(O4 S 2-) FORMUL 7 HOH *172(H2 O) HELIX 1 AA1 LEU A 46 GLU A 60 1 15 HELIX 2 AA2 ILE A 71 GLY A 84 1 14 HELIX 3 AA3 SER A 87 ASP A 92 1 6 HELIX 4 AA4 PRO A 101 THR A 118 1 18 HELIX 5 AA5 PRO A 131 SER A 139 1 9 HELIX 6 AA6 ASP A 158 LEU A 166 1 9 HELIX 7 AA7 THR A 190 GLY A 205 1 16 HELIX 8 AA8 GLY A 220 ALA A 225 1 6 HELIX 9 AA9 ALA A 225 HIS A 235 1 11 HELIX 10 AB1 LEU A 250 ARG A 254 5 5 HELIX 11 AB2 ASP A 264 ALA A 281 1 18 HELIX 12 AB3 PRO A 287 SER A 299 1 13 HELIX 13 AB4 ASN A 300 LYS A 332 1 33 HELIX 14 AB5 SER A 339 GLN A 344 1 6 HELIX 15 AB6 THR A 354 GLY A 366 1 13 HELIX 16 AB7 ALA A 378 MET A 380 5 3 HELIX 17 AB8 ASN A 384 VAL A 395 1 12 HELIX 18 AB9 ILE B 13 ASP B 23 1 11 HELIX 19 AC1 LEU B 46 GLU B 60 1 15 HELIX 20 AC2 ILE B 71 GLY B 84 1 14 HELIX 21 AC3 SER B 87 ASP B 92 1 6 HELIX 22 AC4 PRO B 101 THR B 118 1 18 HELIX 23 AC5 PRO B 131 ALA B 140 1 10 HELIX 24 AC6 ASP B 158 LEU B 166 1 9 HELIX 25 AC7 ASN B 167 ALA B 169 5 3 HELIX 26 AC8 THR B 190 GLY B 205 1 16 HELIX 27 AC9 GLY B 220 ALA B 225 1 6 HELIX 28 AD1 ALA B 225 HIS B 235 1 11 HELIX 29 AD2 LEU B 250 ARG B 254 5 5 HELIX 30 AD3 ASP B 264 ALA B 281 1 18 HELIX 31 AD4 PRO B 287 ASN B 300 1 14 HELIX 32 AD5 ASN B 300 LYS B 332 1 33 HELIX 33 AD6 SER B 339 GLN B 344 1 6 HELIX 34 AD7 THR B 354 GLY B 366 1 13 HELIX 35 AD8 ALA B 378 MET B 380 5 3 HELIX 36 AD9 ASN B 384 LEU B 396 1 13 SHEET 1 AA1 7 ALA A 95 THR A 100 0 SHEET 2 AA1 7 GLY A 256 VAL A 261 -1 O LEU A 260 N ARG A 96 SHEET 3 AA1 7 LEU A 238 SER A 243 -1 N SER A 242 O ALA A 257 SHEET 4 AA1 7 LEU A 207 PHE A 212 1 N PHE A 210 O ALA A 241 SHEET 5 AA1 7 VAL A 174 HIS A 178 1 N PHE A 177 O ASP A 211 SHEET 6 AA1 7 ARG A 122 ASN A 127 1 N TRP A 124 O LEU A 176 SHEET 7 AA1 7 GLU A 143 ALA A 148 1 O ARG A 145 N VAL A 125 SHEET 1 AA2 2 TYR A 150 ASP A 151 0 SHEET 2 AA2 2 THR A 156 LEU A 157 -1 O THR A 156 N ASP A 151 SHEET 1 AA3 2 PHE A 348 PHE A 350 0 SHEET 2 AA3 2 ARG A 374 ASN A 376 -1 O VAL A 375 N SER A 349 SHEET 1 AA4 2 ILE B 29 ASN B 30 0 SHEET 2 AA4 2 VAL B 367 TYR B 368 1 O TYR B 368 N ILE B 29 SHEET 1 AA5 7 ALA B 95 THR B 100 0 SHEET 2 AA5 7 GLY B 256 VAL B 261 -1 O LEU B 260 N ARG B 96 SHEET 3 AA5 7 LEU B 238 SER B 243 -1 N VAL B 240 O THR B 259 SHEET 4 AA5 7 LEU B 207 PHE B 212 1 N PHE B 210 O ALA B 241 SHEET 5 AA5 7 VAL B 174 HIS B 178 1 N PHE B 177 O LEU B 209 SHEET 6 AA5 7 ARG B 122 SER B 126 1 N TRP B 124 O LEU B 176 SHEET 7 AA5 7 GLU B 143 TYR B 147 1 O ARG B 145 N VAL B 125 SHEET 1 AA6 2 TYR B 150 ASP B 151 0 SHEET 2 AA6 2 THR B 156 LEU B 157 -1 O THR B 156 N ASP B 151 SHEET 1 AA7 2 PHE B 348 PHE B 350 0 SHEET 2 AA7 2 ARG B 374 ASN B 376 -1 O VAL B 375 N SER B 349 LINK NZ LYS A 246 C4A PLP A 401 1555 1555 1.60 LINK NZ LYS B 246 C4A PLP B 402 1555 1555 1.64 CISPEP 1 ASN A 127 PRO A 128 0 1.54 CISPEP 2 ASN A 183 PRO A 184 0 9.23 CISPEP 3 ASN B 127 PRO B 128 0 -0.63 CISPEP 4 ASN B 183 PRO B 184 0 7.49 CRYST1 141.630 141.630 80.920 90.00 90.00 120.00 P 63 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007061 0.004076 0.000000 0.00000 SCALE2 0.000000 0.008153 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012358 0.00000