HEADER IMMUNE SYSTEM 27-SEP-22 8EMK TITLE CRYSTAL STRUCTURE OF HLA-B*35:01-NP3 EPITOPE FROM 1957 H2N2 INFLUENZA TITLE 2 STRAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: MHC CLASS I ANTIGEN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 7 CHAIN: B; COMPND 8 FRAGMENT: UNP RESIDUES 21-119; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: NUCLEOPROTEIN NP3 EPITOPE; COMPND 12 CHAIN: C; COMPND 13 FRAGMENT: RESIDUES 418-426; COMPND 14 SYNONYM: NUCLEOCAPSID PROTEIN,PROTEIN N; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HLA-B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET30; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 GENE: B2M, CDABP0092, HDCMA22P; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 16 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PET30; SOURCE 19 MOL_ID: 3; SOURCE 20 SYNTHETIC: YES; SOURCE 21 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS (STRAIN A/SINGAPORE/1/1957 SOURCE 22 H2N2); SOURCE 23 ORGANISM_TAXID: 382781 KEYWDS HLA B*3501, NP418 EPITOPE, INFLUENZA, INFLUENZA A, T CELL IMMUNITY, KEYWDS 2 HOST-VIRUS INTERACTION, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR D.R.LITTLER,J.ROSSJOHN REVDAT 1 27-MAR-24 8EMK 0 JRNL AUTH S.M.QUINONES-PARRA,D.R.LITTLER,J.ROSSJOHN,K.KEDZIERSKA JRNL TITL MOLECULAR DETERMINANTS OF CROSS-STRAIN INFLUENZA A VIRUS JRNL TITL 2 RECOGNITION BY T-CELL RECEPTORS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.67 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.67 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.19 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.351 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 53746 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.951 REMARK 3 FREE R VALUE TEST SET COUNT : 2661 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.1000 - 4.4411 1.00 2918 133 0.1572 0.1706 REMARK 3 2 4.4411 - 3.5259 1.00 2741 161 0.1536 0.1510 REMARK 3 3 3.5259 - 3.0805 1.00 2760 127 0.1652 0.1914 REMARK 3 4 3.0805 - 2.7989 1.00 2698 135 0.1786 0.2141 REMARK 3 5 2.7989 - 2.5984 1.00 2698 164 0.1871 0.2175 REMARK 3 6 2.5984 - 2.4452 1.00 2679 166 0.1868 0.2486 REMARK 3 7 2.4452 - 2.3228 1.00 2682 136 0.1859 0.2246 REMARK 3 8 2.3228 - 2.2217 1.00 2698 142 0.1785 0.2152 REMARK 3 9 2.2217 - 2.1361 1.00 2638 144 0.1841 0.2275 REMARK 3 10 2.1361 - 2.0624 1.00 2684 143 0.1844 0.2262 REMARK 3 11 2.0624 - 1.9980 1.00 2696 126 0.1833 0.1941 REMARK 3 12 1.9980 - 1.9408 1.00 2638 141 0.1869 0.2214 REMARK 3 13 1.9408 - 1.8898 1.00 2667 135 0.1908 0.2274 REMARK 3 14 1.8898 - 1.8436 1.00 2665 138 0.2033 0.2514 REMARK 3 15 1.8436 - 1.8017 1.00 2680 140 0.2109 0.2579 REMARK 3 16 1.8017 - 1.7634 1.00 2660 134 0.2072 0.2330 REMARK 3 17 1.7634 - 1.7281 1.00 2655 138 0.2151 0.2458 REMARK 3 18 1.7281 - 1.6955 1.00 2629 144 0.2240 0.2739 REMARK 3 19 1.6955 - 1.6660 0.96 2599 114 0.2419 0.2605 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.164 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.374 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.39 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 3257 REMARK 3 ANGLE : 1.511 4429 REMARK 3 CHIRALITY : 0.079 452 REMARK 3 PLANARITY : 0.009 586 REMARK 3 DIHEDRAL : 17.455 1220 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.4509 -5.5171 30.2676 REMARK 3 T TENSOR REMARK 3 T11: 0.0631 T22: 0.0608 REMARK 3 T33: 0.0681 T12: -0.0130 REMARK 3 T13: 0.0233 T23: -0.0296 REMARK 3 L TENSOR REMARK 3 L11: 0.0728 L22: 0.0519 REMARK 3 L33: 0.0522 L12: -0.0558 REMARK 3 L13: 0.0108 L23: -0.0179 REMARK 3 S TENSOR REMARK 3 S11: 0.0635 S12: -0.0341 S13: 0.0792 REMARK 3 S21: 0.0819 S22: -0.0449 S23: 0.0512 REMARK 3 S31: 0.0092 S32: -0.0270 S33: -0.0025 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 57 THROUGH 174 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.9441 -15.8655 30.8710 REMARK 3 T TENSOR REMARK 3 T11: 0.0964 T22: 0.0030 REMARK 3 T33: 0.0636 T12: -0.0208 REMARK 3 T13: -0.0312 T23: 0.0207 REMARK 3 L TENSOR REMARK 3 L11: 0.3325 L22: 0.6396 REMARK 3 L33: 0.2141 L12: 0.2510 REMARK 3 L13: 0.1391 L23: 0.0609 REMARK 3 S TENSOR REMARK 3 S11: 0.0482 S12: -0.2736 S13: -0.2606 REMARK 3 S21: 0.2241 S22: -0.0645 S23: -0.3922 REMARK 3 S31: 0.0219 S32: -0.0509 S33: -0.0003 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 175 THROUGH 276 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.9197 -15.3575 3.7486 REMARK 3 T TENSOR REMARK 3 T11: 0.1116 T22: 0.1270 REMARK 3 T33: 0.0420 T12: -0.0405 REMARK 3 T13: -0.0748 T23: -0.0005 REMARK 3 L TENSOR REMARK 3 L11: 0.1749 L22: 0.0918 REMARK 3 L33: 0.1321 L12: 0.0230 REMARK 3 L13: 0.1562 L23: 0.0830 REMARK 3 S TENSOR REMARK 3 S11: -0.0401 S12: 0.0740 S13: 0.0872 REMARK 3 S21: -0.0529 S22: 0.0456 S23: 0.1922 REMARK 3 S31: 0.1818 S32: 0.0047 S33: -0.0093 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 11 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.4991 -3.5122 8.7767 REMARK 3 T TENSOR REMARK 3 T11: 0.1449 T22: 0.1427 REMARK 3 T33: 0.0608 T12: -0.0346 REMARK 3 T13: -0.0255 T23: 0.0335 REMARK 3 L TENSOR REMARK 3 L11: 0.0603 L22: 0.1607 REMARK 3 L33: 0.0209 L12: -0.0020 REMARK 3 L13: 0.0114 L23: 0.0522 REMARK 3 S TENSOR REMARK 3 S11: -0.0891 S12: 0.0057 S13: 0.0323 REMARK 3 S21: -0.1594 S22: -0.0105 S23: 0.1303 REMARK 3 S31: -0.0120 S32: 0.0489 S33: -0.0046 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 12 THROUGH 19 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.5535 2.4203 10.1369 REMARK 3 T TENSOR REMARK 3 T11: 0.0426 T22: 0.2186 REMARK 3 T33: 0.3116 T12: 0.0455 REMARK 3 T13: -0.1647 T23: 0.0225 REMARK 3 L TENSOR REMARK 3 L11: 0.0027 L22: 0.0001 REMARK 3 L33: 0.0054 L12: -0.0005 REMARK 3 L13: 0.0046 L23: -0.0025 REMARK 3 S TENSOR REMARK 3 S11: -0.0173 S12: 0.0127 S13: 0.0002 REMARK 3 S21: -0.0140 S22: -0.0111 S23: 0.0164 REMARK 3 S31: -0.0164 S32: -0.0262 S33: -0.0072 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 20 THROUGH 41 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.3987 2.5930 13.1288 REMARK 3 T TENSOR REMARK 3 T11: 0.1352 T22: 0.0956 REMARK 3 T33: 0.1688 T12: -0.0011 REMARK 3 T13: -0.0810 T23: 0.0165 REMARK 3 L TENSOR REMARK 3 L11: 0.0357 L22: 0.0064 REMARK 3 L33: 0.0743 L12: 0.0045 REMARK 3 L13: -0.0401 L23: 0.0034 REMARK 3 S TENSOR REMARK 3 S11: -0.1353 S12: 0.0476 S13: 0.1188 REMARK 3 S21: -0.1581 S22: 0.0107 S23: 0.1590 REMARK 3 S31: -0.1106 S32: 0.0130 S33: -0.0387 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 42 THROUGH 46 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.5928 15.3121 9.5363 REMARK 3 T TENSOR REMARK 3 T11: 0.2651 T22: 0.1217 REMARK 3 T33: 0.2783 T12: -0.0038 REMARK 3 T13: -0.1544 T23: 0.0341 REMARK 3 L TENSOR REMARK 3 L11: 0.0025 L22: 0.0047 REMARK 3 L33: 0.0192 L12: -0.0030 REMARK 3 L13: 0.0050 L23: -0.0079 REMARK 3 S TENSOR REMARK 3 S11: 0.0187 S12: -0.0147 S13: 0.0163 REMARK 3 S21: -0.0193 S22: 0.0008 S23: 0.0021 REMARK 3 S31: -0.0178 S32: 0.0162 S33: 0.0001 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 47 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.5094 9.4882 20.1504 REMARK 3 T TENSOR REMARK 3 T11: 0.1886 T22: 0.1114 REMARK 3 T33: 0.2623 T12: 0.0256 REMARK 3 T13: -0.1037 T23: -0.0375 REMARK 3 L TENSOR REMARK 3 L11: 0.0014 L22: 0.0052 REMARK 3 L33: 0.0007 L12: -0.0013 REMARK 3 L13: 0.0015 L23: 0.0002 REMARK 3 S TENSOR REMARK 3 S11: -0.0182 S12: -0.0015 S13: 0.0087 REMARK 3 S21: 0.0048 S22: -0.0215 S23: 0.0046 REMARK 3 S31: -0.0191 S32: -0.0059 S33: 0.0000 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 52 THROUGH 71 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.1244 -3.0793 17.6689 REMARK 3 T TENSOR REMARK 3 T11: 0.0793 T22: 0.0755 REMARK 3 T33: 0.0979 T12: 0.0010 REMARK 3 T13: -0.0431 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 0.0257 L22: 0.0081 REMARK 3 L33: 0.0493 L12: 0.0184 REMARK 3 L13: -0.0222 L23: -0.0079 REMARK 3 S TENSOR REMARK 3 S11: -0.0427 S12: 0.0144 S13: 0.0665 REMARK 3 S21: -0.0851 S22: 0.0216 S23: 0.1528 REMARK 3 S31: 0.0127 S32: -0.0520 S33: -0.0153 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 72 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.0908 7.7590 5.5034 REMARK 3 T TENSOR REMARK 3 T11: 0.2157 T22: 0.1507 REMARK 3 T33: 0.2047 T12: -0.0429 REMARK 3 T13: -0.0800 T23: 0.0857 REMARK 3 L TENSOR REMARK 3 L11: 0.0001 L22: 0.0143 REMARK 3 L33: 0.0497 L12: 0.0012 REMARK 3 L13: 0.0041 L23: 0.0165 REMARK 3 S TENSOR REMARK 3 S11: -0.0472 S12: 0.0670 S13: 0.0418 REMARK 3 S21: -0.1804 S22: 0.0058 S23: 0.0875 REMARK 3 S31: -0.1261 S32: 0.0047 S33: -0.0099 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 91 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.1855 2.3792 2.1864 REMARK 3 T TENSOR REMARK 3 T11: 0.3600 T22: 0.2572 REMARK 3 T33: 0.1483 T12: -0.0492 REMARK 3 T13: -0.2086 T23: 0.1299 REMARK 3 L TENSOR REMARK 3 L11: 0.0019 L22: 0.0002 REMARK 3 L33: 0.0035 L12: -0.0011 REMARK 3 L13: -0.0011 L23: -0.0011 REMARK 3 S TENSOR REMARK 3 S11: 0.0079 S12: 0.0133 S13: -0.0025 REMARK 3 S21: -0.0245 S22: -0.0157 S23: 0.0066 REMARK 3 S31: -0.0259 S32: 0.0099 S33: -0.0071 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 9 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.2054 -14.1640 36.7670 REMARK 3 T TENSOR REMARK 3 T11: 0.1648 T22: 0.1721 REMARK 3 T33: 0.1186 T12: -0.0200 REMARK 3 T13: -0.0437 T23: 0.0316 REMARK 3 L TENSOR REMARK 3 L11: 0.0003 L22: 0.0004 REMARK 3 L33: 0.0012 L12: -0.0012 REMARK 3 L13: -0.0005 L23: -0.0007 REMARK 3 S TENSOR REMARK 3 S11: -0.0048 S12: -0.0321 S13: -0.0072 REMARK 3 S21: 0.0659 S22: -0.0042 S23: -0.0691 REMARK 3 S31: 0.0033 S32: -0.0204 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8EMK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-SEP-22. REMARK 100 THE DEPOSITION ID IS D_1000268802. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95370 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56575 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.660 REMARK 200 RESOLUTION RANGE LOW (A) : 43.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.67 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3LKS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG, NA ACETATE, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.41050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.57000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.76150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.57000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.41050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.76150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -40.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 14 69.19 -153.32 REMARK 500 ASP A 29 -126.17 54.60 REMARK 500 ASP A 114 103.41 -160.67 REMARK 500 TYR A 123 -60.92 -120.28 REMARK 500 GLN A 224 44.10 -105.26 REMARK 500 ARG A 239 -27.93 93.14 REMARK 500 TRP B 60 -3.74 75.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 695 DISTANCE = 6.26 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 301 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 38 OG REMARK 620 2 ASP A 39 OD1 111.5 REMARK 620 3 ASP A 196 OD2 76.6 48.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 101 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 83 OD1 REMARK 620 2 HIS B 84 O 80.3 REMARK 620 3 LEU B 87 O 94.4 86.4 REMARK 620 4 HOH B 280 O 84.3 164.0 90.8 REMARK 620 5 HOH B 281 O 175.5 97.2 89.1 98.4 REMARK 620 6 HOH B 292 O 92.4 86.6 169.2 98.2 83.7 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8EMF RELATED DB: PDB REMARK 900 RELATED ID: 8EMG RELATED DB: PDB REMARK 900 RELATED ID: 8EMI RELATED DB: PDB REMARK 900 RELATED ID: 8EMJ RELATED DB: PDB DBREF 8EMK A 1 276 UNP F4NBT2 F4NBT2_HUMAN 25 300 DBREF 8EMK B 1 99 UNP P61769 B2MG_HUMAN 21 119 DBREF 8EMK C 1 9 UNP P26072 NCAP_I57A5 418 426 SEQADV 8EMK MET B 0 UNP P61769 INITIATING METHIONINE SEQADV 8EMK PRO C 6 UNP P26072 THR 423 CONFLICT SEQRES 1 A 276 GLY SER HIS SER MET ARG TYR PHE TYR THR ALA MET SER SEQRES 2 A 276 ARG PRO GLY ARG GLY GLU PRO ARG PHE ILE ALA VAL GLY SEQRES 3 A 276 TYR VAL ASP ASP THR GLN PHE VAL ARG PHE ASP SER ASP SEQRES 4 A 276 ALA ALA SER PRO ARG THR GLU PRO ARG ALA PRO TRP ILE SEQRES 5 A 276 GLU GLN GLU GLY PRO GLU TYR TRP ASP ARG ASN THR GLN SEQRES 6 A 276 ILE PHE LYS THR ASN THR GLN THR TYR ARG GLU SER LEU SEQRES 7 A 276 ARG ASN LEU ARG GLY TYR TYR ASN GLN SER GLU ALA GLY SEQRES 8 A 276 SER HIS ILE ILE GLN ARG MET TYR GLY CYS ASP LEU GLY SEQRES 9 A 276 PRO ASP GLY ARG LEU LEU ARG GLY HIS ASP GLN SER ALA SEQRES 10 A 276 TYR ASP GLY LYS ASP TYR ILE ALA LEU ASN GLU ASP LEU SEQRES 11 A 276 SER SER TRP THR ALA ALA ASP THR ALA ALA GLN ILE THR SEQRES 12 A 276 GLN ARG LYS TRP GLU ALA ALA ARG VAL ALA GLU GLN LEU SEQRES 13 A 276 ARG ALA TYR LEU GLU GLY LEU CYS VAL GLU TRP LEU ARG SEQRES 14 A 276 ARG TYR LEU GLU ASN GLY LYS GLU THR LEU GLN ARG ALA SEQRES 15 A 276 ASP PRO PRO LYS THR HIS VAL THR HIS HIS PRO VAL SER SEQRES 16 A 276 ASP HIS GLU ALA THR LEU ARG CYS TRP ALA LEU GLY PHE SEQRES 17 A 276 TYR PRO ALA GLU ILE THR LEU THR TRP GLN ARG ASP GLY SEQRES 18 A 276 GLU ASP GLN THR GLN ASP THR GLU LEU VAL GLU THR ARG SEQRES 19 A 276 PRO ALA GLY ASP ARG THR PHE GLN LYS TRP ALA ALA VAL SEQRES 20 A 276 VAL VAL PRO SER GLY GLU GLU GLN ARG TYR THR CYS HIS SEQRES 21 A 276 VAL GLN HIS GLU GLY LEU PRO LYS PRO LEU THR LEU ARG SEQRES 22 A 276 TRP GLU PRO SEQRES 1 B 100 MET ILE GLN ARG THR PRO LYS ILE GLN VAL TYR SER ARG SEQRES 2 B 100 HIS PRO ALA GLU ASN GLY LYS SER ASN PHE LEU ASN CYS SEQRES 3 B 100 TYR VAL SER GLY PHE HIS PRO SER ASP ILE GLU VAL ASP SEQRES 4 B 100 LEU LEU LYS ASN GLY GLU ARG ILE GLU LYS VAL GLU HIS SEQRES 5 B 100 SER ASP LEU SER PHE SER LYS ASP TRP SER PHE TYR LEU SEQRES 6 B 100 LEU TYR TYR THR GLU PHE THR PRO THR GLU LYS ASP GLU SEQRES 7 B 100 TYR ALA CYS ARG VAL ASN HIS VAL THR LEU SER GLN PRO SEQRES 8 B 100 LYS ILE VAL LYS TRP ASP ARG ASP MET SEQRES 1 C 9 LEU PRO PHE ASP LYS PRO THR ILE MET HET NA A 301 1 HET NA B 101 1 HETNAM NA SODIUM ION FORMUL 4 NA 2(NA 1+) FORMUL 6 HOH *416(H2 O) HELIX 1 AA1 ALA A 49 GLU A 53 5 5 HELIX 2 AA2 GLY A 56 TYR A 85 1 30 HELIX 3 AA3 ASP A 137 ALA A 150 1 14 HELIX 4 AA4 ARG A 151 GLY A 162 1 12 HELIX 5 AA5 GLY A 162 GLY A 175 1 14 HELIX 6 AA6 GLY A 175 GLN A 180 1 6 HELIX 7 AA7 THR A 225 THR A 228 5 4 HELIX 8 AA8 GLU A 253 GLN A 255 5 3 SHEET 1 AA1 8 GLU A 46 PRO A 47 0 SHEET 2 AA1 8 THR A 31 ASP A 37 -1 N ARG A 35 O GLU A 46 SHEET 3 AA1 8 ARG A 21 VAL A 28 -1 N GLY A 26 O PHE A 33 SHEET 4 AA1 8 HIS A 3 MET A 12 -1 N ARG A 6 O TYR A 27 SHEET 5 AA1 8 ILE A 94 LEU A 103 -1 O LEU A 103 N HIS A 3 SHEET 6 AA1 8 LEU A 109 TYR A 118 -1 O LEU A 110 N ASP A 102 SHEET 7 AA1 8 LYS A 121 LEU A 126 -1 O LEU A 126 N ASP A 114 SHEET 8 AA1 8 TRP A 133 ALA A 135 -1 O THR A 134 N ALA A 125 SHEET 1 AA2 4 LYS A 186 PRO A 193 0 SHEET 2 AA2 4 GLU A 198 PHE A 208 -1 O TRP A 204 N HIS A 188 SHEET 3 AA2 4 PHE A 241 PRO A 250 -1 O ALA A 245 N CYS A 203 SHEET 4 AA2 4 GLU A 229 LEU A 230 -1 N GLU A 229 O ALA A 246 SHEET 1 AA3 4 LYS A 186 PRO A 193 0 SHEET 2 AA3 4 GLU A 198 PHE A 208 -1 O TRP A 204 N HIS A 188 SHEET 3 AA3 4 PHE A 241 PRO A 250 -1 O ALA A 245 N CYS A 203 SHEET 4 AA3 4 ARG A 234 PRO A 235 -1 N ARG A 234 O GLN A 242 SHEET 1 AA4 4 GLU A 222 ASP A 223 0 SHEET 2 AA4 4 THR A 214 ARG A 219 -1 N ARG A 219 O GLU A 222 SHEET 3 AA4 4 TYR A 257 GLN A 262 -1 O HIS A 260 N THR A 216 SHEET 4 AA4 4 LEU A 270 LEU A 272 -1 O LEU A 272 N CYS A 259 SHEET 1 AA5 4 LYS B 6 SER B 11 0 SHEET 2 AA5 4 ASN B 21 PHE B 30 -1 O SER B 28 N LYS B 6 SHEET 3 AA5 4 PHE B 62 PHE B 70 -1 O PHE B 70 N ASN B 21 SHEET 4 AA5 4 GLU B 50 HIS B 51 -1 N GLU B 50 O TYR B 67 SHEET 1 AA6 4 LYS B 6 SER B 11 0 SHEET 2 AA6 4 ASN B 21 PHE B 30 -1 O SER B 28 N LYS B 6 SHEET 3 AA6 4 PHE B 62 PHE B 70 -1 O PHE B 70 N ASN B 21 SHEET 4 AA6 4 SER B 55 PHE B 56 -1 N SER B 55 O TYR B 63 SHEET 1 AA7 4 GLU B 44 ARG B 45 0 SHEET 2 AA7 4 GLU B 36 LYS B 41 -1 N LYS B 41 O GLU B 44 SHEET 3 AA7 4 TYR B 78 ASN B 83 -1 O ARG B 81 N ASP B 38 SHEET 4 AA7 4 LYS B 91 LYS B 94 -1 O LYS B 91 N VAL B 82 SSBOND 1 CYS A 101 CYS A 164 1555 1555 2.10 SSBOND 2 CYS A 203 CYS A 259 1555 1555 2.03 SSBOND 3 CYS B 25 CYS B 80 1555 1555 2.04 LINK OG SER A 38 NA NA A 301 1555 1555 2.61 LINK OD1 ASP A 39 NA NA A 301 1555 1555 2.68 LINK OD2 ASP A 196 NA NA A 301 1555 2454 2.40 LINK OD1 ASN B 83 NA NA B 101 1555 1555 2.54 LINK O HIS B 84 NA NA B 101 1555 1555 2.49 LINK O LEU B 87 NA NA B 101 1555 1555 2.24 LINK NA NA B 101 O HOH B 280 1555 1555 2.52 LINK NA NA B 101 O HOH B 281 1555 1555 2.48 LINK NA NA B 101 O HOH B 292 1555 1555 2.38 CISPEP 1 TYR A 209 PRO A 210 0 -0.38 CISPEP 2 HIS B 31 PRO B 32 0 7.37 CRYST1 50.821 81.523 109.140 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019677 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012266 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009163 0.00000