data_8EO4 # _entry.id 8EO4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8EO4 pdb_00008eo4 10.2210/pdb8eo4/pdb WWPDB D_1000269097 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 8E3K unspecified PDB . 8E3R unspecified PDB . 8E4H unspecified PDB . 8E5Y unspecified PDB . 8EBH unspecified PDB . 8EE9 unspecified PDB . 8EJ6 unspecified PDB . 8EMD unspecified PDB . 8EJ8 unspecified PDB . 8EK3 unspecified PDB . 8EKJ unspecified PDB . 8EKU unspecified PDB . 8ENG unspecified PDB . 8EO1 unspecified PDB . 8EKV unspecified PDB . 8EK8 unspecified PDB . 8EKZ unspecified PDB . 8EM9 unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8EO4 _pdbx_database_status.recvd_initial_deposition_date 2022-10-02 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Terrell, J.R.' 1 0000-0001-5394-5663 'Poon, G.M.K.' 2 0000-0001-5107-9458 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Cell Rep' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2211-1247 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 42 _citation.language ? _citation.page_first 112671 _citation.page_last 112671 _citation.title 'DNA selection by the master transcription factor PU.1.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.celrep.2023.112671 _citation.pdbx_database_id_PubMed 37352101 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Terrell, J.R.' 1 ? primary 'Taylor, S.J.' 2 ? primary 'Schneider, A.L.' 3 ? primary 'Lu, Y.' 4 ? primary 'Vernon, T.N.' 5 ? primary 'Xhani, S.' 6 ? primary 'Gumpper, R.H.' 7 ? primary 'Luo, M.' 8 ? primary 'Wilson, W.D.' 9 ? primary 'Steidl, U.' 10 ? primary 'Poon, G.M.K.' 11 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 116.814 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8EO4 _cell.details ? _cell.formula_units_Z ? _cell.length_a 42.905 _cell.length_a_esd ? _cell.length_b 60.675 _cell.length_b_esd ? _cell.length_c 44.538 _cell.length_c_esd ? _cell.volume 103477.223 _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8EO4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*AP*AP*TP*AP*AP*GP*CP*GP*GP*AP*AP*GP*TP*GP*GP*G)-3') ; 5050.318 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*TP*CP*CP*CP*AP*CP*TP*TP*CP*CP*GP*CP*TP*TP*AP*T)-3') ; 4774.119 1 ? ? ? ? 3 polymer man 'Transcription factor PU.1' 12436.583 1 ? ? 'ETS-Domain UNP residues 165-270' ? 4 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 5 water nat water 18.015 302 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name '31 kDa-transforming protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DA)(DA)(DT)(DA)(DA)(DG)(5CM)(DG)(DG)(DA)(DA)(DG)(DT)(DG)(DG)(DG)' AATAAGCGGAAGTGGG C ? 2 polydeoxyribonucleotide no yes '(DT)(DC)(DC)(DC)(DA)(DC)(DT)(DT)(DC)(5CM)(DG)(DC)(DT)(DT)(DA)(DT)' TCCCACTTCCGCTTAT D ? 3 'polypeptide(L)' no no ;GSKKKIRLYQFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYQKMARALRNYGKTGEVKKV KKKLTYQFSGEVLGRGGLAERRHPPH ; ;GSKKKIRLYQFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYQKMARALRNYGKTGEVKKV KKKLTYQFSGEVLGRGGLAERRHPPH ; F ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DA n 1 3 DT n 1 4 DA n 1 5 DA n 1 6 DG n 1 7 5CM n 1 8 DG n 1 9 DG n 1 10 DA n 1 11 DA n 1 12 DG n 1 13 DT n 1 14 DG n 1 15 DG n 1 16 DG n 2 1 DT n 2 2 DC n 2 3 DC n 2 4 DC n 2 5 DA n 2 6 DC n 2 7 DT n 2 8 DT n 2 9 DC n 2 10 5CM n 2 11 DG n 2 12 DC n 2 13 DT n 2 14 DT n 2 15 DA n 2 16 DT n 3 1 GLY n 3 2 SER n 3 3 LYS n 3 4 LYS n 3 5 LYS n 3 6 ILE n 3 7 ARG n 3 8 LEU n 3 9 TYR n 3 10 GLN n 3 11 PHE n 3 12 LEU n 3 13 LEU n 3 14 ASP n 3 15 LEU n 3 16 LEU n 3 17 ARG n 3 18 SER n 3 19 GLY n 3 20 ASP n 3 21 MET n 3 22 LYS n 3 23 ASP n 3 24 SER n 3 25 ILE n 3 26 TRP n 3 27 TRP n 3 28 VAL n 3 29 ASP n 3 30 LYS n 3 31 ASP n 3 32 LYS n 3 33 GLY n 3 34 THR n 3 35 PHE n 3 36 GLN n 3 37 PHE n 3 38 SER n 3 39 SER n 3 40 LYS n 3 41 HIS n 3 42 LYS n 3 43 GLU n 3 44 ALA n 3 45 LEU n 3 46 ALA n 3 47 HIS n 3 48 ARG n 3 49 TRP n 3 50 GLY n 3 51 ILE n 3 52 GLN n 3 53 LYS n 3 54 GLY n 3 55 ASN n 3 56 ARG n 3 57 LYS n 3 58 LYS n 3 59 MET n 3 60 THR n 3 61 TYR n 3 62 GLN n 3 63 LYS n 3 64 MET n 3 65 ALA n 3 66 ARG n 3 67 ALA n 3 68 LEU n 3 69 ARG n 3 70 ASN n 3 71 TYR n 3 72 GLY n 3 73 LYS n 3 74 THR n 3 75 GLY n 3 76 GLU n 3 77 VAL n 3 78 LYS n 3 79 LYS n 3 80 VAL n 3 81 LYS n 3 82 LYS n 3 83 LYS n 3 84 LEU n 3 85 THR n 3 86 TYR n 3 87 GLN n 3 88 PHE n 3 89 SER n 3 90 GLY n 3 91 GLU n 3 92 VAL n 3 93 LEU n 3 94 GLY n 3 95 ARG n 3 96 GLY n 3 97 GLY n 3 98 LEU n 3 99 ALA n 3 100 GLU n 3 101 ARG n 3 102 ARG n 3 103 HIS n 3 104 PRO n 3 105 PRO n 3 106 HIS n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 106 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene SPI1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 16 'synthetic construct' ? 32630 ? 2 1 sample 1 16 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 8EO4 8EO4 ? 1 ? 1 2 PDB 8EO4 8EO4 ? 2 ? 1 3 UNP SPI1_HUMAN P17947 ? 3 ;GSKKKIRLYQFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYQKMARALRNYGKTGEVKKV KKKLTYQFSGEVLGRGGLAERRHPPH ; 165 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8EO4 C 1 ? 16 ? 8EO4 1 ? 16 ? 1 16 2 2 8EO4 D 1 ? 16 ? 8EO4 17 ? 32 ? 17 32 3 3 8EO4 F 1 ? 106 ? P17947 165 ? 270 ? 165 270 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5CM 'DNA linking' n "5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O7 P' 321.224 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8EO4 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.47 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 50.21 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100 mM Sodium Acetate, pH=4.6, 2% PEG3350' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-03-16 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Double crystal - liquid nitrogen cooled' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0000000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 16.06 _reflns.entry_id 8EO4 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.24 _reflns.d_resolution_low 33.25 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 56794 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.38 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.7 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 17.99 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.04911 _reflns.pdbx_Rpim_I_all 0.02559 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.995 _reflns.pdbx_CC_star 0.999 _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.04157 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.24 _reflns_shell.d_res_low 1.284 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.67 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 5672 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.6 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.4179 _reflns_shell.pdbx_Rpim_I_all 0.2135 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.939 _reflns_shell.pdbx_CC_star 0.984 _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 99.04 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.3564 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 24.16 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8EO4 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.24 _refine.ls_d_res_low 33.25 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 56745 _refine.ls_number_reflns_R_free 1987 _refine.ls_number_reflns_R_work 54758 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.38 _refine.ls_percent_reflns_R_free 3.50 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1384 _refine.ls_R_factor_R_free 0.1651 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1374 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 8E3K _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 16.0717 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1102 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.24 _refine_hist.d_res_low 33.25 _refine_hist.number_atoms_solvent 302 _refine_hist.number_atoms_total 1724 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 769 _refine_hist.pdbx_number_atoms_nucleic_acid 652 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0099 ? 1540 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.2793 ? 2195 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0752 ? 235 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0151 ? 167 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 23.8187 ? 637 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.24 1.27 . . 153 3877 98.75 . . . . 0.1703 . . . . . . . . . . . 0.2107 'X-RAY DIFFRACTION' 1.27 1.31 . . 150 3941 99.61 . . . . 0.1565 . . . . . . . . . . . 0.1974 'X-RAY DIFFRACTION' 1.31 1.34 . . 144 3948 99.61 . . . . 0.1445 . . . . . . . . . . . 0.1889 'X-RAY DIFFRACTION' 1.34 1.39 . . 134 3948 99.46 . . . . 0.1430 . . . . . . . . . . . 0.2066 'X-RAY DIFFRACTION' 1.39 1.44 . . 144 3929 98.74 . . . . 0.1331 . . . . . . . . . . . 0.1733 'X-RAY DIFFRACTION' 1.44 1.49 . . 125 3679 93.63 . . . . 0.1223 . . . . . . . . . . . 0.1775 'X-RAY DIFFRACTION' 1.49 1.56 . . 153 3947 99.73 . . . . 0.1042 . . . . . . . . . . . 0.1266 'X-RAY DIFFRACTION' 1.56 1.64 . . 138 3967 99.52 . . . . 0.1040 . . . . . . . . . . . 0.1368 'X-RAY DIFFRACTION' 1.64 1.75 . . 133 3943 99.17 . . . . 0.1074 . . . . . . . . . . . 0.1517 'X-RAY DIFFRACTION' 1.75 1.88 . . 138 3942 99.13 . . . . 0.1105 . . . . . . . . . . . 0.1249 'X-RAY DIFFRACTION' 1.88 2.07 . . 146 3785 94.91 . . . . 0.1217 . . . . . . . . . . . 0.1469 'X-RAY DIFFRACTION' 2.07 2.37 . . 144 3960 99.81 . . . . 0.1324 . . . . . . . . . . . 0.1777 'X-RAY DIFFRACTION' 2.37 2.99 . . 147 3962 98.82 . . . . 0.1508 . . . . . . . . . . . 0.1493 'X-RAY DIFFRACTION' 2.99 33.25 . . 138 3930 96.60 . . . . 0.1530 . . . . . . . . . . . 0.1839 # _struct.entry_id 8EO4 _struct.title 'Human PU.1 ETS-Domain (165-270) Bound to d(AATAAGCGGAAGTGGG) with Di-methylated CpG sites' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8EO4 _struct_keywords.text 'transcription factor, protein-DNA complex, ETS family, ETS, PU.1, TRANSCRIPTION-DNA complex' _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ARG C 7 ? GLY C 19 ? ARG F 171 GLY F 183 1 ? 13 HELX_P HELX_P2 AA2 HIS C 41 ? GLY C 54 ? HIS F 205 GLY F 218 1 ? 14 HELX_P HELX_P3 AA3 THR C 60 ? ASN C 70 ? THR F 224 ASN F 234 1 ? 11 HELX_P HELX_P4 AA4 ASN C 70 ? GLY C 75 ? ASN F 234 GLY F 239 1 ? 6 HELX_P HELX_P5 AA5 SER C 89 ? ALA C 99 ? SER F 253 ALA F 263 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DG 6 "O3'" ? ? ? 1_555 A 5CM 7 P ? ? C DG 6 C 5CM 7 1_555 ? ? ? ? ? ? ? 1.556 ? ? covale2 covale both ? A 5CM 7 "O3'" ? ? ? 1_555 A DG 8 P ? ? C 5CM 7 C DG 8 1_555 ? ? ? ? ? ? ? 1.560 ? ? covale3 covale both ? B DC 9 "O3'" ? ? ? 1_555 B 5CM 10 P ? ? D DC 25 D 5CM 26 1_555 ? ? ? ? ? ? ? 1.553 ? ? covale4 covale both ? B 5CM 10 "O3'" ? ? ? 1_555 B DG 11 P ? ? D 5CM 26 D DG 27 1_555 ? ? ? ? ? ? ? 1.556 ? ? metalc1 metalc ? ? B DT 16 OP1 ? ? ? 1_555 D NA . NA ? ? D DT 32 D NA 101 1_555 ? ? ? ? ? ? ? 2.233 ? ? metalc2 metalc ? ? D NA . NA ? ? ? 1_555 F HOH . O ? ? D NA 101 D HOH 248 1_555 ? ? ? ? ? ? ? 2.543 ? ? hydrog1 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 15 N1 ? ? C DT 3 D DA 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 15 N6 ? ? C DT 3 D DA 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 14 N3 ? ? C DA 4 D DT 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 14 O4 ? ? C DA 4 D DT 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DT 13 N3 ? ? C DA 5 D DT 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 13 O4 ? ? C DA 5 D DT 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 12 N3 ? ? C DG 6 D DC 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 12 O2 ? ? C DG 6 D DC 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 12 N4 ? ? C DG 6 D DC 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A 5CM 7 N3 ? ? ? 1_555 B DG 11 N1 ? ? C 5CM 7 D DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A 5CM 7 N4 ? ? ? 1_555 B DG 11 O6 ? ? C 5CM 7 D DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A 5CM 7 O2 ? ? ? 1_555 B DG 11 N2 ? ? C 5CM 7 D DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 8 N1 ? ? ? 1_555 B 5CM 10 N3 ? ? C DG 8 D 5CM 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 8 N2 ? ? ? 1_555 B 5CM 10 O2 ? ? C DG 8 D 5CM 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 8 O6 ? ? ? 1_555 B 5CM 10 N4 ? ? C DG 8 D 5CM 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 9 N3 ? ? C DG 9 D DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 9 O2 ? ? C DG 9 D DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 9 N4 ? ? C DG 9 D DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DA 10 N1 ? ? ? 1_555 B DT 8 N3 ? ? C DA 10 D DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DA 10 N6 ? ? ? 1_555 B DT 8 O4 ? ? C DA 10 D DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DA 11 N1 ? ? ? 1_555 B DT 7 N3 ? ? C DA 11 D DT 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DA 11 N6 ? ? ? 1_555 B DT 7 O4 ? ? C DA 11 D DT 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 12 N1 ? ? ? 1_555 B DC 6 N3 ? ? C DG 12 D DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 12 N2 ? ? ? 1_555 B DC 6 O2 ? ? C DG 12 D DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 12 O6 ? ? ? 1_555 B DC 6 N4 ? ? C DG 12 D DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DT 13 N3 ? ? ? 1_555 B DA 5 N1 ? ? C DT 13 D DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DT 13 O4 ? ? ? 1_555 B DA 5 N6 ? ? C DT 13 D DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 14 O6 ? ? ? 1_555 B DC 4 N4 ? ? C DG 14 D DC 20 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog29 hydrog ? ? A DG 15 N1 ? ? ? 1_555 B DC 3 N3 ? ? C DG 15 D DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DG 15 N2 ? ? ? 1_555 B DC 3 O2 ? ? C DG 15 D DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DG 15 O6 ? ? ? 1_555 B DC 3 N4 ? ? C DG 15 D DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DG 16 N1 ? ? ? 1_555 B DC 2 N3 ? ? C DG 16 D DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DG 16 N2 ? ? ? 1_555 B DC 2 O2 ? ? C DG 16 D DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DG 16 O6 ? ? ? 1_555 B DC 2 N4 ? ? C DG 16 D DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE C 25 ? ASP C 29 ? ILE F 189 ASP F 193 AA1 2 THR C 34 ? PHE C 37 ? THR F 198 PHE F 201 AA1 3 THR C 85 ? PHE C 88 ? THR F 249 PHE F 252 AA1 4 VAL C 77 ? LYS C 79 ? VAL F 241 LYS F 243 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL C 28 ? N VAL F 192 O THR C 34 ? O THR F 198 AA1 2 3 N PHE C 35 ? N PHE F 199 O TYR C 86 ? O TYR F 250 AA1 3 4 O GLN C 87 ? O GLN F 251 N LYS C 78 ? N LYS F 242 # _atom_sites.entry_id 8EO4 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.023307 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.011781 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016481 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025158 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? H ? ? 0.51345 0.48472 ? ? 24.73122 6.32584 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? NA ? ? 9.38062 1.54875 ? ? 3.38349 72.32734 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 1 1 DA DA C . n A 1 2 DA 2 2 2 DA DA C . n A 1 3 DT 3 3 3 DT DT C . n A 1 4 DA 4 4 4 DA DA C . n A 1 5 DA 5 5 5 DA DA C . n A 1 6 DG 6 6 6 DG DG C . n A 1 7 5CM 7 7 7 5CM 5CM C . n A 1 8 DG 8 8 8 DG DG C . n A 1 9 DG 9 9 9 DG DG C . n A 1 10 DA 10 10 10 DA DA C . n A 1 11 DA 11 11 11 DA DA C . n A 1 12 DG 12 12 12 DG DG C . n A 1 13 DT 13 13 13 DT DT C . n A 1 14 DG 14 14 14 DG DG C . n A 1 15 DG 15 15 15 DG DG C . n A 1 16 DG 16 16 16 DG DG C . n B 2 1 DT 1 17 17 DT DT D . n B 2 2 DC 2 18 18 DC DC D . n B 2 3 DC 3 19 19 DC DC D . n B 2 4 DC 4 20 20 DC DC D . n B 2 5 DA 5 21 21 DA DA D . n B 2 6 DC 6 22 22 DC DC D . n B 2 7 DT 7 23 23 DT DT D . n B 2 8 DT 8 24 24 DT DT D . n B 2 9 DC 9 25 25 DC DC D . n B 2 10 5CM 10 26 26 5CM 5CM D . n B 2 11 DG 11 27 27 DG DG D . n B 2 12 DC 12 28 28 DC DC D . n B 2 13 DT 13 29 29 DT DT D . n B 2 14 DT 14 30 30 DT DT D . n B 2 15 DA 15 31 31 DA DA D . n B 2 16 DT 16 32 32 DT DT D . n C 3 1 GLY 1 165 ? ? ? F . n C 3 2 SER 2 166 ? ? ? F . n C 3 3 LYS 3 167 ? ? ? F . n C 3 4 LYS 4 168 ? ? ? F . n C 3 5 LYS 5 169 169 LYS LYS F . n C 3 6 ILE 6 170 170 ILE ILE F . n C 3 7 ARG 7 171 171 ARG ARG F . n C 3 8 LEU 8 172 172 LEU LEU F . n C 3 9 TYR 9 173 173 TYR TYR F . n C 3 10 GLN 10 174 174 GLN GLN F . n C 3 11 PHE 11 175 175 PHE PHE F . n C 3 12 LEU 12 176 176 LEU LEU F . n C 3 13 LEU 13 177 177 LEU LEU F . n C 3 14 ASP 14 178 178 ASP ASP F . n C 3 15 LEU 15 179 179 LEU LEU F . n C 3 16 LEU 16 180 180 LEU LEU F . n C 3 17 ARG 17 181 181 ARG ARG F . n C 3 18 SER 18 182 182 SER SER F . n C 3 19 GLY 19 183 183 GLY GLY F . n C 3 20 ASP 20 184 184 ASP ASP F . n C 3 21 MET 21 185 185 MET MET F . n C 3 22 LYS 22 186 186 LYS LYS F . n C 3 23 ASP 23 187 187 ASP ASP F . n C 3 24 SER 24 188 188 SER SER F . n C 3 25 ILE 25 189 189 ILE ILE F . n C 3 26 TRP 26 190 190 TRP TRP F . n C 3 27 TRP 27 191 191 TRP TRP F . n C 3 28 VAL 28 192 192 VAL VAL F . n C 3 29 ASP 29 193 193 ASP ASP F . n C 3 30 LYS 30 194 194 LYS LYS F . n C 3 31 ASP 31 195 195 ASP ASP F . n C 3 32 LYS 32 196 196 LYS LYS F . n C 3 33 GLY 33 197 197 GLY GLY F . n C 3 34 THR 34 198 198 THR THR F . n C 3 35 PHE 35 199 199 PHE PHE F . n C 3 36 GLN 36 200 200 GLN GLN F . n C 3 37 PHE 37 201 201 PHE PHE F . n C 3 38 SER 38 202 202 SER SER F . n C 3 39 SER 39 203 203 SER SER F . n C 3 40 LYS 40 204 204 LYS LYS F . n C 3 41 HIS 41 205 205 HIS HIS F . n C 3 42 LYS 42 206 206 LYS LYS F . n C 3 43 GLU 43 207 207 GLU GLU F . n C 3 44 ALA 44 208 208 ALA ALA F . n C 3 45 LEU 45 209 209 LEU LEU F . n C 3 46 ALA 46 210 210 ALA ALA F . n C 3 47 HIS 47 211 211 HIS HIS F . n C 3 48 ARG 48 212 212 ARG ARG F . n C 3 49 TRP 49 213 213 TRP TRP F . n C 3 50 GLY 50 214 214 GLY GLY F . n C 3 51 ILE 51 215 215 ILE ILE F . n C 3 52 GLN 52 216 216 GLN GLN F . n C 3 53 LYS 53 217 217 LYS LYS F . n C 3 54 GLY 54 218 218 GLY GLY F . n C 3 55 ASN 55 219 219 ASN ASN F . n C 3 56 ARG 56 220 220 ARG ARG F . n C 3 57 LYS 57 221 221 LYS LYS F . n C 3 58 LYS 58 222 222 LYS LYS F . n C 3 59 MET 59 223 223 MET MET F . n C 3 60 THR 60 224 224 THR THR F . n C 3 61 TYR 61 225 225 TYR TYR F . n C 3 62 GLN 62 226 226 GLN GLN F . n C 3 63 LYS 63 227 227 LYS LYS F . n C 3 64 MET 64 228 228 MET MET F . n C 3 65 ALA 65 229 229 ALA ALA F . n C 3 66 ARG 66 230 230 ARG ARG F . n C 3 67 ALA 67 231 231 ALA ALA F . n C 3 68 LEU 68 232 232 LEU LEU F . n C 3 69 ARG 69 233 233 ARG ARG F . n C 3 70 ASN 70 234 234 ASN ASN F . n C 3 71 TYR 71 235 235 TYR TYR F . n C 3 72 GLY 72 236 236 GLY GLY F . n C 3 73 LYS 73 237 237 LYS LYS F . n C 3 74 THR 74 238 238 THR THR F . n C 3 75 GLY 75 239 239 GLY GLY F . n C 3 76 GLU 76 240 240 GLU GLU F . n C 3 77 VAL 77 241 241 VAL VAL F . n C 3 78 LYS 78 242 242 LYS LYS F . n C 3 79 LYS 79 243 243 LYS LYS F . n C 3 80 VAL 80 244 244 VAL VAL F . n C 3 81 LYS 81 245 245 LYS LYS F . n C 3 82 LYS 82 246 246 LYS LYS F . n C 3 83 LYS 83 247 247 LYS LYS F . n C 3 84 LEU 84 248 248 LEU LEU F . n C 3 85 THR 85 249 249 THR THR F . n C 3 86 TYR 86 250 250 TYR TYR F . n C 3 87 GLN 87 251 251 GLN GLN F . n C 3 88 PHE 88 252 252 PHE PHE F . n C 3 89 SER 89 253 253 SER SER F . n C 3 90 GLY 90 254 254 GLY GLY F . n C 3 91 GLU 91 255 255 GLU GLU F . n C 3 92 VAL 92 256 256 VAL VAL F . n C 3 93 LEU 93 257 257 LEU LEU F . n C 3 94 GLY 94 258 258 GLY GLY F . n C 3 95 ARG 95 259 259 ARG ARG F . n C 3 96 GLY 96 260 260 GLY GLY F . n C 3 97 GLY 97 261 261 GLY GLY F . n C 3 98 LEU 98 262 262 LEU LEU F . n C 3 99 ALA 99 263 263 ALA ALA F . n C 3 100 GLU 100 264 ? ? ? F . n C 3 101 ARG 101 265 ? ? ? F . n C 3 102 ARG 102 266 ? ? ? F . n C 3 103 HIS 103 267 ? ? ? F . n C 3 104 PRO 104 268 ? ? ? F . n C 3 105 PRO 105 269 ? ? ? F . n C 3 106 HIS 106 270 ? ? ? F . n # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 3 gpoon@gsu.edu Gregory Poon MK 'principal investigator/group leader' 0000-0001-5107-9458 4 wdw@gsu.edu W Wilson D 'principal investigator/group leader' 0000-0001-5225-5089 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NA 1 101 1 NA NA D . E 5 HOH 1 101 113 HOH HOH C . E 5 HOH 2 102 306 HOH HOH C . E 5 HOH 3 103 119 HOH HOH C . E 5 HOH 4 104 152 HOH HOH C . E 5 HOH 5 105 199 HOH HOH C . E 5 HOH 6 106 118 HOH HOH C . E 5 HOH 7 107 63 HOH HOH C . E 5 HOH 8 108 6 HOH HOH C . E 5 HOH 9 109 203 HOH HOH C . E 5 HOH 10 110 36 HOH HOH C . E 5 HOH 11 111 108 HOH HOH C . E 5 HOH 12 112 81 HOH HOH C . E 5 HOH 13 113 61 HOH HOH C . E 5 HOH 14 114 29 HOH HOH C . E 5 HOH 15 115 50 HOH HOH C . E 5 HOH 16 116 122 HOH HOH C . E 5 HOH 17 117 149 HOH HOH C . E 5 HOH 18 118 82 HOH HOH C . E 5 HOH 19 119 91 HOH HOH C . E 5 HOH 20 120 161 HOH HOH C . E 5 HOH 21 121 286 HOH HOH C . E 5 HOH 22 122 215 HOH HOH C . E 5 HOH 23 123 48 HOH HOH C . E 5 HOH 24 124 126 HOH HOH C . E 5 HOH 25 125 19 HOH HOH C . E 5 HOH 26 126 133 HOH HOH C . E 5 HOH 27 127 16 HOH HOH C . E 5 HOH 28 128 181 HOH HOH C . E 5 HOH 29 129 25 HOH HOH C . E 5 HOH 30 130 100 HOH HOH C . E 5 HOH 31 131 300 HOH HOH C . E 5 HOH 32 132 272 HOH HOH C . E 5 HOH 33 133 66 HOH HOH C . E 5 HOH 34 134 44 HOH HOH C . E 5 HOH 35 135 58 HOH HOH C . E 5 HOH 36 136 89 HOH HOH C . E 5 HOH 37 137 343 HOH HOH C . E 5 HOH 38 138 96 HOH HOH C . E 5 HOH 39 139 135 HOH HOH C . E 5 HOH 40 140 182 HOH HOH C . E 5 HOH 41 141 95 HOH HOH C . E 5 HOH 42 142 246 HOH HOH C . E 5 HOH 43 143 137 HOH HOH C . E 5 HOH 44 144 153 HOH HOH C . E 5 HOH 45 145 139 HOH HOH C . E 5 HOH 46 146 171 HOH HOH C . E 5 HOH 47 147 56 HOH HOH C . E 5 HOH 48 148 253 HOH HOH C . E 5 HOH 49 149 131 HOH HOH C . E 5 HOH 50 150 296 HOH HOH C . E 5 HOH 51 151 172 HOH HOH C . E 5 HOH 52 152 94 HOH HOH C . E 5 HOH 53 153 51 HOH HOH C . E 5 HOH 54 154 336 HOH HOH C . E 5 HOH 55 155 193 HOH HOH C . E 5 HOH 56 156 313 HOH HOH C . E 5 HOH 57 157 197 HOH HOH C . E 5 HOH 58 158 302 HOH HOH C . E 5 HOH 59 159 138 HOH HOH C . E 5 HOH 60 160 159 HOH HOH C . E 5 HOH 61 161 59 HOH HOH C . E 5 HOH 62 162 98 HOH HOH C . E 5 HOH 63 163 276 HOH HOH C . E 5 HOH 64 164 252 HOH HOH C . E 5 HOH 65 165 75 HOH HOH C . E 5 HOH 66 166 328 HOH HOH C . E 5 HOH 67 167 258 HOH HOH C . E 5 HOH 68 168 283 HOH HOH C . E 5 HOH 69 169 194 HOH HOH C . E 5 HOH 70 170 202 HOH HOH C . E 5 HOH 71 171 239 HOH HOH C . E 5 HOH 72 172 13 HOH HOH C . E 5 HOH 73 173 292 HOH HOH C . E 5 HOH 74 174 297 HOH HOH C . E 5 HOH 75 175 211 HOH HOH C . E 5 HOH 76 176 165 HOH HOH C . E 5 HOH 77 177 207 HOH HOH C . E 5 HOH 78 178 201 HOH HOH C . E 5 HOH 79 179 340 HOH HOH C . E 5 HOH 80 180 256 HOH HOH C . E 5 HOH 81 181 290 HOH HOH C . E 5 HOH 82 182 301 HOH HOH C . F 5 HOH 1 201 3 HOH HOH D . F 5 HOH 2 202 169 HOH HOH D . F 5 HOH 3 203 229 HOH HOH D . F 5 HOH 4 204 209 HOH HOH D . F 5 HOH 5 205 24 HOH HOH D . F 5 HOH 6 206 9 HOH HOH D . F 5 HOH 7 207 179 HOH HOH D . F 5 HOH 8 208 27 HOH HOH D . F 5 HOH 9 209 4 HOH HOH D . F 5 HOH 10 210 20 HOH HOH D . F 5 HOH 11 211 15 HOH HOH D . F 5 HOH 12 212 273 HOH HOH D . F 5 HOH 13 213 232 HOH HOH D . F 5 HOH 14 214 7 HOH HOH D . F 5 HOH 15 215 62 HOH HOH D . F 5 HOH 16 216 189 HOH HOH D . F 5 HOH 17 217 111 HOH HOH D . F 5 HOH 18 218 158 HOH HOH D . F 5 HOH 19 219 60 HOH HOH D . F 5 HOH 20 220 115 HOH HOH D . F 5 HOH 21 221 11 HOH HOH D . F 5 HOH 22 222 205 HOH HOH D . F 5 HOH 23 223 120 HOH HOH D . F 5 HOH 24 224 145 HOH HOH D . F 5 HOH 25 225 116 HOH HOH D . F 5 HOH 26 226 55 HOH HOH D . F 5 HOH 27 227 90 HOH HOH D . F 5 HOH 28 228 1 HOH HOH D . F 5 HOH 29 229 65 HOH HOH D . F 5 HOH 30 230 110 HOH HOH D . F 5 HOH 31 231 140 HOH HOH D . F 5 HOH 32 232 41 HOH HOH D . F 5 HOH 33 233 21 HOH HOH D . F 5 HOH 34 234 180 HOH HOH D . F 5 HOH 35 235 262 HOH HOH D . F 5 HOH 36 236 71 HOH HOH D . F 5 HOH 37 237 250 HOH HOH D . F 5 HOH 38 238 184 HOH HOH D . F 5 HOH 39 239 107 HOH HOH D . F 5 HOH 40 240 49 HOH HOH D . F 5 HOH 41 241 208 HOH HOH D . F 5 HOH 42 242 99 HOH HOH D . F 5 HOH 43 243 146 HOH HOH D . F 5 HOH 44 244 341 HOH HOH D . F 5 HOH 45 245 2 HOH HOH D . F 5 HOH 46 246 78 HOH HOH D . F 5 HOH 47 247 222 HOH HOH D . F 5 HOH 48 248 228 HOH HOH D . F 5 HOH 49 249 42 HOH HOH D . F 5 HOH 50 250 156 HOH HOH D . F 5 HOH 51 251 271 HOH HOH D . F 5 HOH 52 252 318 HOH HOH D . F 5 HOH 53 253 320 HOH HOH D . F 5 HOH 54 254 97 HOH HOH D . F 5 HOH 55 255 125 HOH HOH D . F 5 HOH 56 256 230 HOH HOH D . F 5 HOH 57 257 87 HOH HOH D . F 5 HOH 58 258 196 HOH HOH D . F 5 HOH 59 259 342 HOH HOH D . F 5 HOH 60 260 32 HOH HOH D . F 5 HOH 61 261 327 HOH HOH D . F 5 HOH 62 262 163 HOH HOH D . F 5 HOH 63 263 240 HOH HOH D . F 5 HOH 64 264 143 HOH HOH D . F 5 HOH 65 265 219 HOH HOH D . F 5 HOH 66 266 195 HOH HOH D . F 5 HOH 67 267 221 HOH HOH D . F 5 HOH 68 268 216 HOH HOH D . F 5 HOH 69 269 127 HOH HOH D . F 5 HOH 70 270 316 HOH HOH D . F 5 HOH 71 271 247 HOH HOH D . F 5 HOH 72 272 277 HOH HOH D . G 5 HOH 1 301 192 HOH HOH F . G 5 HOH 2 302 142 HOH HOH F . G 5 HOH 3 303 53 HOH HOH F . G 5 HOH 4 304 141 HOH HOH F . G 5 HOH 5 305 231 HOH HOH F . G 5 HOH 6 306 339 HOH HOH F . G 5 HOH 7 307 212 HOH HOH F . G 5 HOH 8 308 200 HOH HOH F . G 5 HOH 9 309 134 HOH HOH F . G 5 HOH 10 310 186 HOH HOH F . G 5 HOH 11 311 244 HOH HOH F . G 5 HOH 12 312 213 HOH HOH F . G 5 HOH 13 313 28 HOH HOH F . G 5 HOH 14 314 155 HOH HOH F . G 5 HOH 15 315 5 HOH HOH F . G 5 HOH 16 316 105 HOH HOH F . G 5 HOH 17 317 73 HOH HOH F . G 5 HOH 18 318 74 HOH HOH F . G 5 HOH 19 319 8 HOH HOH F . G 5 HOH 20 320 76 HOH HOH F . G 5 HOH 21 321 92 HOH HOH F . G 5 HOH 22 322 18 HOH HOH F . G 5 HOH 23 323 168 HOH HOH F . G 5 HOH 24 324 294 HOH HOH F . G 5 HOH 25 325 72 HOH HOH F . G 5 HOH 26 326 123 HOH HOH F . G 5 HOH 27 327 30 HOH HOH F . G 5 HOH 28 328 185 HOH HOH F . G 5 HOH 29 329 40 HOH HOH F . G 5 HOH 30 330 67 HOH HOH F . G 5 HOH 31 331 47 HOH HOH F . G 5 HOH 32 332 26 HOH HOH F . G 5 HOH 33 333 243 HOH HOH F . G 5 HOH 34 334 88 HOH HOH F . G 5 HOH 35 335 33 HOH HOH F . G 5 HOH 36 336 17 HOH HOH F . G 5 HOH 37 337 68 HOH HOH F . G 5 HOH 38 338 31 HOH HOH F . G 5 HOH 39 339 298 HOH HOH F . G 5 HOH 40 340 57 HOH HOH F . G 5 HOH 41 341 23 HOH HOH F . G 5 HOH 42 342 346 HOH HOH F . G 5 HOH 43 343 175 HOH HOH F . G 5 HOH 44 344 46 HOH HOH F . G 5 HOH 45 345 104 HOH HOH F . G 5 HOH 46 346 10 HOH HOH F . G 5 HOH 47 347 130 HOH HOH F . G 5 HOH 48 348 345 HOH HOH F . G 5 HOH 49 349 77 HOH HOH F . G 5 HOH 50 350 70 HOH HOH F . G 5 HOH 51 351 106 HOH HOH F . G 5 HOH 52 352 225 HOH HOH F . G 5 HOH 53 353 117 HOH HOH F . G 5 HOH 54 354 79 HOH HOH F . G 5 HOH 55 355 245 HOH HOH F . G 5 HOH 56 356 251 HOH HOH F . G 5 HOH 57 357 210 HOH HOH F . G 5 HOH 58 358 39 HOH HOH F . G 5 HOH 59 359 45 HOH HOH F . G 5 HOH 60 360 22 HOH HOH F . G 5 HOH 61 361 37 HOH HOH F . G 5 HOH 62 362 101 HOH HOH F . G 5 HOH 63 363 52 HOH HOH F . G 5 HOH 64 364 132 HOH HOH F . G 5 HOH 65 365 114 HOH HOH F . G 5 HOH 66 366 43 HOH HOH F . G 5 HOH 67 367 14 HOH HOH F . G 5 HOH 68 368 64 HOH HOH F . G 5 HOH 69 369 85 HOH HOH F . G 5 HOH 70 370 176 HOH HOH F . G 5 HOH 71 371 154 HOH HOH F . G 5 HOH 72 372 34 HOH HOH F . G 5 HOH 73 373 263 HOH HOH F . G 5 HOH 74 374 331 HOH HOH F . G 5 HOH 75 375 12 HOH HOH F . G 5 HOH 76 376 344 HOH HOH F . G 5 HOH 77 377 35 HOH HOH F . G 5 HOH 78 378 83 HOH HOH F . G 5 HOH 79 379 281 HOH HOH F . G 5 HOH 80 380 121 HOH HOH F . G 5 HOH 81 381 218 HOH HOH F . G 5 HOH 82 382 38 HOH HOH F . G 5 HOH 83 383 93 HOH HOH F . G 5 HOH 84 384 178 HOH HOH F . G 5 HOH 85 385 144 HOH HOH F . G 5 HOH 86 386 259 HOH HOH F . G 5 HOH 87 387 84 HOH HOH F . G 5 HOH 88 388 164 HOH HOH F . G 5 HOH 89 389 187 HOH HOH F . G 5 HOH 90 390 177 HOH HOH F . G 5 HOH 91 391 257 HOH HOH F . G 5 HOH 92 392 136 HOH HOH F . G 5 HOH 93 393 86 HOH HOH F . G 5 HOH 94 394 248 HOH HOH F . G 5 HOH 95 395 237 HOH HOH F . G 5 HOH 96 396 291 HOH HOH F . G 5 HOH 97 397 148 HOH HOH F . G 5 HOH 98 398 204 HOH HOH F . G 5 HOH 99 399 295 HOH HOH F . G 5 HOH 100 400 102 HOH HOH F . G 5 HOH 101 401 323 HOH HOH F . G 5 HOH 102 402 255 HOH HOH F . G 5 HOH 103 403 335 HOH HOH F . G 5 HOH 104 404 338 HOH HOH F . G 5 HOH 105 405 282 HOH HOH F . G 5 HOH 106 406 314 HOH HOH F . G 5 HOH 107 407 310 HOH HOH F . G 5 HOH 108 408 308 HOH HOH F . G 5 HOH 109 409 242 HOH HOH F . G 5 HOH 110 410 160 HOH HOH F . G 5 HOH 111 411 206 HOH HOH F . G 5 HOH 112 412 109 HOH HOH F . G 5 HOH 113 413 278 HOH HOH F . G 5 HOH 114 414 238 HOH HOH F . G 5 HOH 115 415 329 HOH HOH F . G 5 HOH 116 416 223 HOH HOH F . G 5 HOH 117 417 293 HOH HOH F . G 5 HOH 118 418 80 HOH HOH F . G 5 HOH 119 419 124 HOH HOH F . G 5 HOH 120 420 150 HOH HOH F . G 5 HOH 121 421 214 HOH HOH F . G 5 HOH 122 422 274 HOH HOH F . G 5 HOH 123 423 315 HOH HOH F . G 5 HOH 124 424 129 HOH HOH F . G 5 HOH 125 425 266 HOH HOH F . G 5 HOH 126 426 173 HOH HOH F . G 5 HOH 127 427 288 HOH HOH F . G 5 HOH 128 428 233 HOH HOH F . G 5 HOH 129 429 334 HOH HOH F . G 5 HOH 130 430 217 HOH HOH F . G 5 HOH 131 431 54 HOH HOH F . G 5 HOH 132 432 241 HOH HOH F . G 5 HOH 133 433 191 HOH HOH F . G 5 HOH 134 434 147 HOH HOH F . G 5 HOH 135 435 151 HOH HOH F . G 5 HOH 136 436 103 HOH HOH F . G 5 HOH 137 437 69 HOH HOH F . G 5 HOH 138 438 234 HOH HOH F . G 5 HOH 139 439 321 HOH HOH F . G 5 HOH 140 440 167 HOH HOH F . G 5 HOH 141 441 166 HOH HOH F . G 5 HOH 142 442 236 HOH HOH F . G 5 HOH 143 443 198 HOH HOH F . G 5 HOH 144 444 190 HOH HOH F . G 5 HOH 145 445 220 HOH HOH F . G 5 HOH 146 446 311 HOH HOH F . G 5 HOH 147 447 289 HOH HOH F . G 5 HOH 148 448 265 HOH HOH F . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id OP1 _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id B _pdbx_struct_conn_angle.ptnr1_label_comp_id DT _pdbx_struct_conn_angle.ptnr1_label_seq_id 16 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id D _pdbx_struct_conn_angle.ptnr1_auth_comp_id DT _pdbx_struct_conn_angle.ptnr1_auth_seq_id 32 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id NA _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id D _pdbx_struct_conn_angle.ptnr2_label_comp_id NA _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id D _pdbx_struct_conn_angle.ptnr2_auth_comp_id NA _pdbx_struct_conn_angle.ptnr2_auth_seq_id 101 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id O _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id F _pdbx_struct_conn_angle.ptnr3_label_comp_id HOH _pdbx_struct_conn_angle.ptnr3_label_seq_id . _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id D _pdbx_struct_conn_angle.ptnr3_auth_comp_id HOH _pdbx_struct_conn_angle.ptnr3_auth_seq_id 248 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 121.6 _pdbx_struct_conn_angle.value_esd ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-07-05 2 'Structure model' 1 1 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' pdbx_initial_refinement_model # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -x,y+1/2,-z # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.19.2_4158 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_entry_details.entry_id 8EO4 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O F HOH 413 ? ? O F HOH 425 ? ? 2.10 2 1 OE2 F GLU 207 ? B O F HOH 301 ? ? 2.11 3 1 OE2 F GLU 207 ? A O F HOH 302 ? ? 2.13 4 1 NZ F LYS 243 ? A O F LYS 246 ? ? 2.18 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" D DC 25 ? ? "C3'" D DC 25 ? ? 1.368 1.419 -0.051 0.006 N 2 1 "O3'" D DA 31 ? ? "C3'" D DA 31 ? ? 1.370 1.419 -0.049 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" C DG 8 ? ? "C1'" C DG 8 ? ? N9 C DG 8 ? ? 114.48 108.30 6.18 0.30 N 2 1 "O4'" D DT 17 ? ? "C1'" D DT 17 ? ? N1 D DT 17 ? ? 103.64 108.00 -4.36 0.70 N 3 1 "O4'" D DC 18 ? ? "C1'" D DC 18 ? ? N1 D DC 18 ? ? 111.21 108.30 2.91 0.30 N 4 1 "C3'" D DC 25 ? ? "O3'" D DC 25 ? ? P D 5CM 26 ? ? 129.84 119.70 10.14 1.20 Y 5 1 "C3'" D DA 31 ? ? "C2'" D DA 31 ? ? "C1'" D DA 31 ? ? 97.48 102.40 -4.92 0.80 N # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id DT _pdbx_validate_planes.auth_asym_id D _pdbx_validate_planes.auth_seq_id 23 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.073 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? C HOH 180 ? 6.25 . 2 1 O ? C HOH 181 ? 7.77 . 3 1 O ? C HOH 182 ? 10.40 . 4 1 O ? D HOH 272 ? 5.95 . 5 1 O ? F HOH 444 ? 6.18 . 6 1 O ? F HOH 445 ? 6.33 . 7 1 O ? F HOH 446 ? 6.55 . 8 1 O ? F HOH 447 ? 6.68 . 9 1 O ? F HOH 448 ? 6.81 . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 F LYS 169 ? CG ? C LYS 5 CG 2 1 Y 1 F LYS 169 ? CD ? C LYS 5 CD 3 1 Y 1 F LYS 169 ? CE ? C LYS 5 CE 4 1 Y 1 F LYS 169 ? NZ ? C LYS 5 NZ 5 1 Y 0 F LYS 204 ? CD ? C LYS 40 CD 6 1 Y 0 F ARG 220 ? CZ ? C ARG 56 CZ 7 1 Y 0 F ARG 220 ? NH1 ? C ARG 56 NH1 8 1 Y 0 F LYS 237 ? CD ? C LYS 73 CD 9 1 Y 0 F LYS 247 ? CG ? C LYS 83 CG 10 1 Y 1 F ARG 259 ? CG ? C ARG 95 CG 11 1 Y 1 F ARG 259 ? CD ? C ARG 95 CD 12 1 Y 1 F ARG 259 ? NE ? C ARG 95 NE 13 1 Y 1 F ARG 259 ? CZ ? C ARG 95 CZ 14 1 Y 1 F ARG 259 ? NH1 ? C ARG 95 NH1 15 1 Y 1 F ARG 259 ? NH2 ? C ARG 95 NH2 16 1 Y 1 F LEU 262 ? CG ? C LEU 98 CG 17 1 Y 1 F LEU 262 ? CD1 ? C LEU 98 CD1 18 1 Y 1 F LEU 262 ? CD2 ? C LEU 98 CD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 F GLY 165 ? C GLY 1 2 1 Y 1 F SER 166 ? C SER 2 3 1 Y 1 F LYS 167 ? C LYS 3 4 1 Y 1 F LYS 168 ? C LYS 4 5 1 Y 1 F GLU 264 ? C GLU 100 6 1 Y 1 F ARG 265 ? C ARG 101 7 1 Y 1 F ARG 266 ? C ARG 102 8 1 Y 1 F HIS 267 ? C HIS 103 9 1 Y 1 F PRO 268 ? C PRO 104 10 1 Y 1 F PRO 269 ? C PRO 105 11 1 Y 1 F HIS 270 ? C HIS 106 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5CM N1 N N N 1 5CM C2 C N N 2 5CM N3 N N N 3 5CM C4 C N N 4 5CM C5 C N N 5 5CM C5A C N N 6 5CM C6 C N N 7 5CM O2 O N N 8 5CM N4 N N N 9 5CM "C1'" C N R 10 5CM "C2'" C N N 11 5CM "C3'" C N S 12 5CM "C4'" C N R 13 5CM "O4'" O N N 14 5CM "O3'" O N N 15 5CM "C5'" C N N 16 5CM "O5'" O N N 17 5CM P P N N 18 5CM OP1 O N N 19 5CM OP2 O N N 20 5CM OP3 O N N 21 5CM H5A1 H N N 22 5CM H5A2 H N N 23 5CM H5A3 H N N 24 5CM H6 H N N 25 5CM HN41 H N N 26 5CM HN42 H N N 27 5CM "H1'" H N N 28 5CM "H2'" H N N 29 5CM "H2''" H N N 30 5CM "H3'" H N N 31 5CM "H4'" H N N 32 5CM "HO3'" H N N 33 5CM "H5'" H N N 34 5CM "H5''" H N N 35 5CM HOP2 H N N 36 5CM HOP3 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 DA OP3 O N N 111 DA P P N N 112 DA OP1 O N N 113 DA OP2 O N N 114 DA "O5'" O N N 115 DA "C5'" C N N 116 DA "C4'" C N R 117 DA "O4'" O N N 118 DA "C3'" C N S 119 DA "O3'" O N N 120 DA "C2'" C N N 121 DA "C1'" C N R 122 DA N9 N Y N 123 DA C8 C Y N 124 DA N7 N Y N 125 DA C5 C Y N 126 DA C6 C Y N 127 DA N6 N N N 128 DA N1 N Y N 129 DA C2 C Y N 130 DA N3 N Y N 131 DA C4 C Y N 132 DA HOP3 H N N 133 DA HOP2 H N N 134 DA "H5'" H N N 135 DA "H5''" H N N 136 DA "H4'" H N N 137 DA "H3'" H N N 138 DA "HO3'" H N N 139 DA "H2'" H N N 140 DA "H2''" H N N 141 DA "H1'" H N N 142 DA H8 H N N 143 DA H61 H N N 144 DA H62 H N N 145 DA H2 H N N 146 DC OP3 O N N 147 DC P P N N 148 DC OP1 O N N 149 DC OP2 O N N 150 DC "O5'" O N N 151 DC "C5'" C N N 152 DC "C4'" C N R 153 DC "O4'" O N N 154 DC "C3'" C N S 155 DC "O3'" O N N 156 DC "C2'" C N N 157 DC "C1'" C N R 158 DC N1 N N N 159 DC C2 C N N 160 DC O2 O N N 161 DC N3 N N N 162 DC C4 C N N 163 DC N4 N N N 164 DC C5 C N N 165 DC C6 C N N 166 DC HOP3 H N N 167 DC HOP2 H N N 168 DC "H5'" H N N 169 DC "H5''" H N N 170 DC "H4'" H N N 171 DC "H3'" H N N 172 DC "HO3'" H N N 173 DC "H2'" H N N 174 DC "H2''" H N N 175 DC "H1'" H N N 176 DC H41 H N N 177 DC H42 H N N 178 DC H5 H N N 179 DC H6 H N N 180 DG OP3 O N N 181 DG P P N N 182 DG OP1 O N N 183 DG OP2 O N N 184 DG "O5'" O N N 185 DG "C5'" C N N 186 DG "C4'" C N R 187 DG "O4'" O N N 188 DG "C3'" C N S 189 DG "O3'" O N N 190 DG "C2'" C N N 191 DG "C1'" C N R 192 DG N9 N Y N 193 DG C8 C Y N 194 DG N7 N Y N 195 DG C5 C Y N 196 DG C6 C N N 197 DG O6 O N N 198 DG N1 N N N 199 DG C2 C N N 200 DG N2 N N N 201 DG N3 N N N 202 DG C4 C Y N 203 DG HOP3 H N N 204 DG HOP2 H N N 205 DG "H5'" H N N 206 DG "H5''" H N N 207 DG "H4'" H N N 208 DG "H3'" H N N 209 DG "HO3'" H N N 210 DG "H2'" H N N 211 DG "H2''" H N N 212 DG "H1'" H N N 213 DG H8 H N N 214 DG H1 H N N 215 DG H21 H N N 216 DG H22 H N N 217 DT OP3 O N N 218 DT P P N N 219 DT OP1 O N N 220 DT OP2 O N N 221 DT "O5'" O N N 222 DT "C5'" C N N 223 DT "C4'" C N R 224 DT "O4'" O N N 225 DT "C3'" C N S 226 DT "O3'" O N N 227 DT "C2'" C N N 228 DT "C1'" C N R 229 DT N1 N N N 230 DT C2 C N N 231 DT O2 O N N 232 DT N3 N N N 233 DT C4 C N N 234 DT O4 O N N 235 DT C5 C N N 236 DT C7 C N N 237 DT C6 C N N 238 DT HOP3 H N N 239 DT HOP2 H N N 240 DT "H5'" H N N 241 DT "H5''" H N N 242 DT "H4'" H N N 243 DT "H3'" H N N 244 DT "HO3'" H N N 245 DT "H2'" H N N 246 DT "H2''" H N N 247 DT "H1'" H N N 248 DT H3 H N N 249 DT H71 H N N 250 DT H72 H N N 251 DT H73 H N N 252 DT H6 H N N 253 GLN N N N N 254 GLN CA C N S 255 GLN C C N N 256 GLN O O N N 257 GLN CB C N N 258 GLN CG C N N 259 GLN CD C N N 260 GLN OE1 O N N 261 GLN NE2 N N N 262 GLN OXT O N N 263 GLN H H N N 264 GLN H2 H N N 265 GLN HA H N N 266 GLN HB2 H N N 267 GLN HB3 H N N 268 GLN HG2 H N N 269 GLN HG3 H N N 270 GLN HE21 H N N 271 GLN HE22 H N N 272 GLN HXT H N N 273 GLU N N N N 274 GLU CA C N S 275 GLU C C N N 276 GLU O O N N 277 GLU CB C N N 278 GLU CG C N N 279 GLU CD C N N 280 GLU OE1 O N N 281 GLU OE2 O N N 282 GLU OXT O N N 283 GLU H H N N 284 GLU H2 H N N 285 GLU HA H N N 286 GLU HB2 H N N 287 GLU HB3 H N N 288 GLU HG2 H N N 289 GLU HG3 H N N 290 GLU HE2 H N N 291 GLU HXT H N N 292 GLY N N N N 293 GLY CA C N N 294 GLY C C N N 295 GLY O O N N 296 GLY OXT O N N 297 GLY H H N N 298 GLY H2 H N N 299 GLY HA2 H N N 300 GLY HA3 H N N 301 GLY HXT H N N 302 HIS N N N N 303 HIS CA C N S 304 HIS C C N N 305 HIS O O N N 306 HIS CB C N N 307 HIS CG C Y N 308 HIS ND1 N Y N 309 HIS CD2 C Y N 310 HIS CE1 C Y N 311 HIS NE2 N Y N 312 HIS OXT O N N 313 HIS H H N N 314 HIS H2 H N N 315 HIS HA H N N 316 HIS HB2 H N N 317 HIS HB3 H N N 318 HIS HD1 H N N 319 HIS HD2 H N N 320 HIS HE1 H N N 321 HIS HE2 H N N 322 HIS HXT H N N 323 HOH O O N N 324 HOH H1 H N N 325 HOH H2 H N N 326 ILE N N N N 327 ILE CA C N S 328 ILE C C N N 329 ILE O O N N 330 ILE CB C N S 331 ILE CG1 C N N 332 ILE CG2 C N N 333 ILE CD1 C N N 334 ILE OXT O N N 335 ILE H H N N 336 ILE H2 H N N 337 ILE HA H N N 338 ILE HB H N N 339 ILE HG12 H N N 340 ILE HG13 H N N 341 ILE HG21 H N N 342 ILE HG22 H N N 343 ILE HG23 H N N 344 ILE HD11 H N N 345 ILE HD12 H N N 346 ILE HD13 H N N 347 ILE HXT H N N 348 LEU N N N N 349 LEU CA C N S 350 LEU C C N N 351 LEU O O N N 352 LEU CB C N N 353 LEU CG C N N 354 LEU CD1 C N N 355 LEU CD2 C N N 356 LEU OXT O N N 357 LEU H H N N 358 LEU H2 H N N 359 LEU HA H N N 360 LEU HB2 H N N 361 LEU HB3 H N N 362 LEU HG H N N 363 LEU HD11 H N N 364 LEU HD12 H N N 365 LEU HD13 H N N 366 LEU HD21 H N N 367 LEU HD22 H N N 368 LEU HD23 H N N 369 LEU HXT H N N 370 LYS N N N N 371 LYS CA C N S 372 LYS C C N N 373 LYS O O N N 374 LYS CB C N N 375 LYS CG C N N 376 LYS CD C N N 377 LYS CE C N N 378 LYS NZ N N N 379 LYS OXT O N N 380 LYS H H N N 381 LYS H2 H N N 382 LYS HA H N N 383 LYS HB2 H N N 384 LYS HB3 H N N 385 LYS HG2 H N N 386 LYS HG3 H N N 387 LYS HD2 H N N 388 LYS HD3 H N N 389 LYS HE2 H N N 390 LYS HE3 H N N 391 LYS HZ1 H N N 392 LYS HZ2 H N N 393 LYS HZ3 H N N 394 LYS HXT H N N 395 MET N N N N 396 MET CA C N S 397 MET C C N N 398 MET O O N N 399 MET CB C N N 400 MET CG C N N 401 MET SD S N N 402 MET CE C N N 403 MET OXT O N N 404 MET H H N N 405 MET H2 H N N 406 MET HA H N N 407 MET HB2 H N N 408 MET HB3 H N N 409 MET HG2 H N N 410 MET HG3 H N N 411 MET HE1 H N N 412 MET HE2 H N N 413 MET HE3 H N N 414 MET HXT H N N 415 NA NA NA N N 416 PHE N N N N 417 PHE CA C N S 418 PHE C C N N 419 PHE O O N N 420 PHE CB C N N 421 PHE CG C Y N 422 PHE CD1 C Y N 423 PHE CD2 C Y N 424 PHE CE1 C Y N 425 PHE CE2 C Y N 426 PHE CZ C Y N 427 PHE OXT O N N 428 PHE H H N N 429 PHE H2 H N N 430 PHE HA H N N 431 PHE HB2 H N N 432 PHE HB3 H N N 433 PHE HD1 H N N 434 PHE HD2 H N N 435 PHE HE1 H N N 436 PHE HE2 H N N 437 PHE HZ H N N 438 PHE HXT H N N 439 PRO N N N N 440 PRO CA C N S 441 PRO C C N N 442 PRO O O N N 443 PRO CB C N N 444 PRO CG C N N 445 PRO CD C N N 446 PRO OXT O N N 447 PRO H H N N 448 PRO HA H N N 449 PRO HB2 H N N 450 PRO HB3 H N N 451 PRO HG2 H N N 452 PRO HG3 H N N 453 PRO HD2 H N N 454 PRO HD3 H N N 455 PRO HXT H N N 456 SER N N N N 457 SER CA C N S 458 SER C C N N 459 SER O O N N 460 SER CB C N N 461 SER OG O N N 462 SER OXT O N N 463 SER H H N N 464 SER H2 H N N 465 SER HA H N N 466 SER HB2 H N N 467 SER HB3 H N N 468 SER HG H N N 469 SER HXT H N N 470 THR N N N N 471 THR CA C N S 472 THR C C N N 473 THR O O N N 474 THR CB C N R 475 THR OG1 O N N 476 THR CG2 C N N 477 THR OXT O N N 478 THR H H N N 479 THR H2 H N N 480 THR HA H N N 481 THR HB H N N 482 THR HG1 H N N 483 THR HG21 H N N 484 THR HG22 H N N 485 THR HG23 H N N 486 THR HXT H N N 487 TRP N N N N 488 TRP CA C N S 489 TRP C C N N 490 TRP O O N N 491 TRP CB C N N 492 TRP CG C Y N 493 TRP CD1 C Y N 494 TRP CD2 C Y N 495 TRP NE1 N Y N 496 TRP CE2 C Y N 497 TRP CE3 C Y N 498 TRP CZ2 C Y N 499 TRP CZ3 C Y N 500 TRP CH2 C Y N 501 TRP OXT O N N 502 TRP H H N N 503 TRP H2 H N N 504 TRP HA H N N 505 TRP HB2 H N N 506 TRP HB3 H N N 507 TRP HD1 H N N 508 TRP HE1 H N N 509 TRP HE3 H N N 510 TRP HZ2 H N N 511 TRP HZ3 H N N 512 TRP HH2 H N N 513 TRP HXT H N N 514 TYR N N N N 515 TYR CA C N S 516 TYR C C N N 517 TYR O O N N 518 TYR CB C N N 519 TYR CG C Y N 520 TYR CD1 C Y N 521 TYR CD2 C Y N 522 TYR CE1 C Y N 523 TYR CE2 C Y N 524 TYR CZ C Y N 525 TYR OH O N N 526 TYR OXT O N N 527 TYR H H N N 528 TYR H2 H N N 529 TYR HA H N N 530 TYR HB2 H N N 531 TYR HB3 H N N 532 TYR HD1 H N N 533 TYR HD2 H N N 534 TYR HE1 H N N 535 TYR HE2 H N N 536 TYR HH H N N 537 TYR HXT H N N 538 VAL N N N N 539 VAL CA C N S 540 VAL C C N N 541 VAL O O N N 542 VAL CB C N N 543 VAL CG1 C N N 544 VAL CG2 C N N 545 VAL OXT O N N 546 VAL H H N N 547 VAL H2 H N N 548 VAL HA H N N 549 VAL HB H N N 550 VAL HG11 H N N 551 VAL HG12 H N N 552 VAL HG13 H N N 553 VAL HG21 H N N 554 VAL HG22 H N N 555 VAL HG23 H N N 556 VAL HXT H N N 557 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5CM N1 C2 sing N N 1 5CM N1 C6 sing N N 2 5CM N1 "C1'" sing N N 3 5CM C2 N3 sing N N 4 5CM C2 O2 doub N N 5 5CM N3 C4 doub N N 6 5CM C4 C5 sing N N 7 5CM C4 N4 sing N N 8 5CM C5 C5A sing N N 9 5CM C5 C6 doub N N 10 5CM C5A H5A1 sing N N 11 5CM C5A H5A2 sing N N 12 5CM C5A H5A3 sing N N 13 5CM C6 H6 sing N N 14 5CM N4 HN41 sing N N 15 5CM N4 HN42 sing N N 16 5CM "C1'" "C2'" sing N N 17 5CM "C1'" "O4'" sing N N 18 5CM "C1'" "H1'" sing N N 19 5CM "C2'" "C3'" sing N N 20 5CM "C2'" "H2'" sing N N 21 5CM "C2'" "H2''" sing N N 22 5CM "C3'" "C4'" sing N N 23 5CM "C3'" "O3'" sing N N 24 5CM "C3'" "H3'" sing N N 25 5CM "C4'" "O4'" sing N N 26 5CM "C4'" "C5'" sing N N 27 5CM "C4'" "H4'" sing N N 28 5CM "O3'" "HO3'" sing N N 29 5CM "C5'" "O5'" sing N N 30 5CM "C5'" "H5'" sing N N 31 5CM "C5'" "H5''" sing N N 32 5CM "O5'" P sing N N 33 5CM P OP1 doub N N 34 5CM P OP2 sing N N 35 5CM P OP3 sing N N 36 5CM OP2 HOP2 sing N N 37 5CM OP3 HOP3 sing N N 38 ALA N CA sing N N 39 ALA N H sing N N 40 ALA N H2 sing N N 41 ALA CA C sing N N 42 ALA CA CB sing N N 43 ALA CA HA sing N N 44 ALA C O doub N N 45 ALA C OXT sing N N 46 ALA CB HB1 sing N N 47 ALA CB HB2 sing N N 48 ALA CB HB3 sing N N 49 ALA OXT HXT sing N N 50 ARG N CA sing N N 51 ARG N H sing N N 52 ARG N H2 sing N N 53 ARG CA C sing N N 54 ARG CA CB sing N N 55 ARG CA HA sing N N 56 ARG C O doub N N 57 ARG C OXT sing N N 58 ARG CB CG sing N N 59 ARG CB HB2 sing N N 60 ARG CB HB3 sing N N 61 ARG CG CD sing N N 62 ARG CG HG2 sing N N 63 ARG CG HG3 sing N N 64 ARG CD NE sing N N 65 ARG CD HD2 sing N N 66 ARG CD HD3 sing N N 67 ARG NE CZ sing N N 68 ARG NE HE sing N N 69 ARG CZ NH1 sing N N 70 ARG CZ NH2 doub N N 71 ARG NH1 HH11 sing N N 72 ARG NH1 HH12 sing N N 73 ARG NH2 HH21 sing N N 74 ARG NH2 HH22 sing N N 75 ARG OXT HXT sing N N 76 ASN N CA sing N N 77 ASN N H sing N N 78 ASN N H2 sing N N 79 ASN CA C sing N N 80 ASN CA CB sing N N 81 ASN CA HA sing N N 82 ASN C O doub N N 83 ASN C OXT sing N N 84 ASN CB CG sing N N 85 ASN CB HB2 sing N N 86 ASN CB HB3 sing N N 87 ASN CG OD1 doub N N 88 ASN CG ND2 sing N N 89 ASN ND2 HD21 sing N N 90 ASN ND2 HD22 sing N N 91 ASN OXT HXT sing N N 92 ASP N CA sing N N 93 ASP N H sing N N 94 ASP N H2 sing N N 95 ASP CA C sing N N 96 ASP CA CB sing N N 97 ASP CA HA sing N N 98 ASP C O doub N N 99 ASP C OXT sing N N 100 ASP CB CG sing N N 101 ASP CB HB2 sing N N 102 ASP CB HB3 sing N N 103 ASP CG OD1 doub N N 104 ASP CG OD2 sing N N 105 ASP OD2 HD2 sing N N 106 ASP OXT HXT sing N N 107 DA OP3 P sing N N 108 DA OP3 HOP3 sing N N 109 DA P OP1 doub N N 110 DA P OP2 sing N N 111 DA P "O5'" sing N N 112 DA OP2 HOP2 sing N N 113 DA "O5'" "C5'" sing N N 114 DA "C5'" "C4'" sing N N 115 DA "C5'" "H5'" sing N N 116 DA "C5'" "H5''" sing N N 117 DA "C4'" "O4'" sing N N 118 DA "C4'" "C3'" sing N N 119 DA "C4'" "H4'" sing N N 120 DA "O4'" "C1'" sing N N 121 DA "C3'" "O3'" sing N N 122 DA "C3'" "C2'" sing N N 123 DA "C3'" "H3'" sing N N 124 DA "O3'" "HO3'" sing N N 125 DA "C2'" "C1'" sing N N 126 DA "C2'" "H2'" sing N N 127 DA "C2'" "H2''" sing N N 128 DA "C1'" N9 sing N N 129 DA "C1'" "H1'" sing N N 130 DA N9 C8 sing Y N 131 DA N9 C4 sing Y N 132 DA C8 N7 doub Y N 133 DA C8 H8 sing N N 134 DA N7 C5 sing Y N 135 DA C5 C6 sing Y N 136 DA C5 C4 doub Y N 137 DA C6 N6 sing N N 138 DA C6 N1 doub Y N 139 DA N6 H61 sing N N 140 DA N6 H62 sing N N 141 DA N1 C2 sing Y N 142 DA C2 N3 doub Y N 143 DA C2 H2 sing N N 144 DA N3 C4 sing Y N 145 DC OP3 P sing N N 146 DC OP3 HOP3 sing N N 147 DC P OP1 doub N N 148 DC P OP2 sing N N 149 DC P "O5'" sing N N 150 DC OP2 HOP2 sing N N 151 DC "O5'" "C5'" sing N N 152 DC "C5'" "C4'" sing N N 153 DC "C5'" "H5'" sing N N 154 DC "C5'" "H5''" sing N N 155 DC "C4'" "O4'" sing N N 156 DC "C4'" "C3'" sing N N 157 DC "C4'" "H4'" sing N N 158 DC "O4'" "C1'" sing N N 159 DC "C3'" "O3'" sing N N 160 DC "C3'" "C2'" sing N N 161 DC "C3'" "H3'" sing N N 162 DC "O3'" "HO3'" sing N N 163 DC "C2'" "C1'" sing N N 164 DC "C2'" "H2'" sing N N 165 DC "C2'" "H2''" sing N N 166 DC "C1'" N1 sing N N 167 DC "C1'" "H1'" sing N N 168 DC N1 C2 sing N N 169 DC N1 C6 sing N N 170 DC C2 O2 doub N N 171 DC C2 N3 sing N N 172 DC N3 C4 doub N N 173 DC C4 N4 sing N N 174 DC C4 C5 sing N N 175 DC N4 H41 sing N N 176 DC N4 H42 sing N N 177 DC C5 C6 doub N N 178 DC C5 H5 sing N N 179 DC C6 H6 sing N N 180 DG OP3 P sing N N 181 DG OP3 HOP3 sing N N 182 DG P OP1 doub N N 183 DG P OP2 sing N N 184 DG P "O5'" sing N N 185 DG OP2 HOP2 sing N N 186 DG "O5'" "C5'" sing N N 187 DG "C5'" "C4'" sing N N 188 DG "C5'" "H5'" sing N N 189 DG "C5'" "H5''" sing N N 190 DG "C4'" "O4'" sing N N 191 DG "C4'" "C3'" sing N N 192 DG "C4'" "H4'" sing N N 193 DG "O4'" "C1'" sing N N 194 DG "C3'" "O3'" sing N N 195 DG "C3'" "C2'" sing N N 196 DG "C3'" "H3'" sing N N 197 DG "O3'" "HO3'" sing N N 198 DG "C2'" "C1'" sing N N 199 DG "C2'" "H2'" sing N N 200 DG "C2'" "H2''" sing N N 201 DG "C1'" N9 sing N N 202 DG "C1'" "H1'" sing N N 203 DG N9 C8 sing Y N 204 DG N9 C4 sing Y N 205 DG C8 N7 doub Y N 206 DG C8 H8 sing N N 207 DG N7 C5 sing Y N 208 DG C5 C6 sing N N 209 DG C5 C4 doub Y N 210 DG C6 O6 doub N N 211 DG C6 N1 sing N N 212 DG N1 C2 sing N N 213 DG N1 H1 sing N N 214 DG C2 N2 sing N N 215 DG C2 N3 doub N N 216 DG N2 H21 sing N N 217 DG N2 H22 sing N N 218 DG N3 C4 sing N N 219 DT OP3 P sing N N 220 DT OP3 HOP3 sing N N 221 DT P OP1 doub N N 222 DT P OP2 sing N N 223 DT P "O5'" sing N N 224 DT OP2 HOP2 sing N N 225 DT "O5'" "C5'" sing N N 226 DT "C5'" "C4'" sing N N 227 DT "C5'" "H5'" sing N N 228 DT "C5'" "H5''" sing N N 229 DT "C4'" "O4'" sing N N 230 DT "C4'" "C3'" sing N N 231 DT "C4'" "H4'" sing N N 232 DT "O4'" "C1'" sing N N 233 DT "C3'" "O3'" sing N N 234 DT "C3'" "C2'" sing N N 235 DT "C3'" "H3'" sing N N 236 DT "O3'" "HO3'" sing N N 237 DT "C2'" "C1'" sing N N 238 DT "C2'" "H2'" sing N N 239 DT "C2'" "H2''" sing N N 240 DT "C1'" N1 sing N N 241 DT "C1'" "H1'" sing N N 242 DT N1 C2 sing N N 243 DT N1 C6 sing N N 244 DT C2 O2 doub N N 245 DT C2 N3 sing N N 246 DT N3 C4 sing N N 247 DT N3 H3 sing N N 248 DT C4 O4 doub N N 249 DT C4 C5 sing N N 250 DT C5 C7 sing N N 251 DT C5 C6 doub N N 252 DT C7 H71 sing N N 253 DT C7 H72 sing N N 254 DT C7 H73 sing N N 255 DT C6 H6 sing N N 256 GLN N CA sing N N 257 GLN N H sing N N 258 GLN N H2 sing N N 259 GLN CA C sing N N 260 GLN CA CB sing N N 261 GLN CA HA sing N N 262 GLN C O doub N N 263 GLN C OXT sing N N 264 GLN CB CG sing N N 265 GLN CB HB2 sing N N 266 GLN CB HB3 sing N N 267 GLN CG CD sing N N 268 GLN CG HG2 sing N N 269 GLN CG HG3 sing N N 270 GLN CD OE1 doub N N 271 GLN CD NE2 sing N N 272 GLN NE2 HE21 sing N N 273 GLN NE2 HE22 sing N N 274 GLN OXT HXT sing N N 275 GLU N CA sing N N 276 GLU N H sing N N 277 GLU N H2 sing N N 278 GLU CA C sing N N 279 GLU CA CB sing N N 280 GLU CA HA sing N N 281 GLU C O doub N N 282 GLU C OXT sing N N 283 GLU CB CG sing N N 284 GLU CB HB2 sing N N 285 GLU CB HB3 sing N N 286 GLU CG CD sing N N 287 GLU CG HG2 sing N N 288 GLU CG HG3 sing N N 289 GLU CD OE1 doub N N 290 GLU CD OE2 sing N N 291 GLU OE2 HE2 sing N N 292 GLU OXT HXT sing N N 293 GLY N CA sing N N 294 GLY N H sing N N 295 GLY N H2 sing N N 296 GLY CA C sing N N 297 GLY CA HA2 sing N N 298 GLY CA HA3 sing N N 299 GLY C O doub N N 300 GLY C OXT sing N N 301 GLY OXT HXT sing N N 302 HIS N CA sing N N 303 HIS N H sing N N 304 HIS N H2 sing N N 305 HIS CA C sing N N 306 HIS CA CB sing N N 307 HIS CA HA sing N N 308 HIS C O doub N N 309 HIS C OXT sing N N 310 HIS CB CG sing N N 311 HIS CB HB2 sing N N 312 HIS CB HB3 sing N N 313 HIS CG ND1 sing Y N 314 HIS CG CD2 doub Y N 315 HIS ND1 CE1 doub Y N 316 HIS ND1 HD1 sing N N 317 HIS CD2 NE2 sing Y N 318 HIS CD2 HD2 sing N N 319 HIS CE1 NE2 sing Y N 320 HIS CE1 HE1 sing N N 321 HIS NE2 HE2 sing N N 322 HIS OXT HXT sing N N 323 HOH O H1 sing N N 324 HOH O H2 sing N N 325 ILE N CA sing N N 326 ILE N H sing N N 327 ILE N H2 sing N N 328 ILE CA C sing N N 329 ILE CA CB sing N N 330 ILE CA HA sing N N 331 ILE C O doub N N 332 ILE C OXT sing N N 333 ILE CB CG1 sing N N 334 ILE CB CG2 sing N N 335 ILE CB HB sing N N 336 ILE CG1 CD1 sing N N 337 ILE CG1 HG12 sing N N 338 ILE CG1 HG13 sing N N 339 ILE CG2 HG21 sing N N 340 ILE CG2 HG22 sing N N 341 ILE CG2 HG23 sing N N 342 ILE CD1 HD11 sing N N 343 ILE CD1 HD12 sing N N 344 ILE CD1 HD13 sing N N 345 ILE OXT HXT sing N N 346 LEU N CA sing N N 347 LEU N H sing N N 348 LEU N H2 sing N N 349 LEU CA C sing N N 350 LEU CA CB sing N N 351 LEU CA HA sing N N 352 LEU C O doub N N 353 LEU C OXT sing N N 354 LEU CB CG sing N N 355 LEU CB HB2 sing N N 356 LEU CB HB3 sing N N 357 LEU CG CD1 sing N N 358 LEU CG CD2 sing N N 359 LEU CG HG sing N N 360 LEU CD1 HD11 sing N N 361 LEU CD1 HD12 sing N N 362 LEU CD1 HD13 sing N N 363 LEU CD2 HD21 sing N N 364 LEU CD2 HD22 sing N N 365 LEU CD2 HD23 sing N N 366 LEU OXT HXT sing N N 367 LYS N CA sing N N 368 LYS N H sing N N 369 LYS N H2 sing N N 370 LYS CA C sing N N 371 LYS CA CB sing N N 372 LYS CA HA sing N N 373 LYS C O doub N N 374 LYS C OXT sing N N 375 LYS CB CG sing N N 376 LYS CB HB2 sing N N 377 LYS CB HB3 sing N N 378 LYS CG CD sing N N 379 LYS CG HG2 sing N N 380 LYS CG HG3 sing N N 381 LYS CD CE sing N N 382 LYS CD HD2 sing N N 383 LYS CD HD3 sing N N 384 LYS CE NZ sing N N 385 LYS CE HE2 sing N N 386 LYS CE HE3 sing N N 387 LYS NZ HZ1 sing N N 388 LYS NZ HZ2 sing N N 389 LYS NZ HZ3 sing N N 390 LYS OXT HXT sing N N 391 MET N CA sing N N 392 MET N H sing N N 393 MET N H2 sing N N 394 MET CA C sing N N 395 MET CA CB sing N N 396 MET CA HA sing N N 397 MET C O doub N N 398 MET C OXT sing N N 399 MET CB CG sing N N 400 MET CB HB2 sing N N 401 MET CB HB3 sing N N 402 MET CG SD sing N N 403 MET CG HG2 sing N N 404 MET CG HG3 sing N N 405 MET SD CE sing N N 406 MET CE HE1 sing N N 407 MET CE HE2 sing N N 408 MET CE HE3 sing N N 409 MET OXT HXT sing N N 410 PHE N CA sing N N 411 PHE N H sing N N 412 PHE N H2 sing N N 413 PHE CA C sing N N 414 PHE CA CB sing N N 415 PHE CA HA sing N N 416 PHE C O doub N N 417 PHE C OXT sing N N 418 PHE CB CG sing N N 419 PHE CB HB2 sing N N 420 PHE CB HB3 sing N N 421 PHE CG CD1 doub Y N 422 PHE CG CD2 sing Y N 423 PHE CD1 CE1 sing Y N 424 PHE CD1 HD1 sing N N 425 PHE CD2 CE2 doub Y N 426 PHE CD2 HD2 sing N N 427 PHE CE1 CZ doub Y N 428 PHE CE1 HE1 sing N N 429 PHE CE2 CZ sing Y N 430 PHE CE2 HE2 sing N N 431 PHE CZ HZ sing N N 432 PHE OXT HXT sing N N 433 PRO N CA sing N N 434 PRO N CD sing N N 435 PRO N H sing N N 436 PRO CA C sing N N 437 PRO CA CB sing N N 438 PRO CA HA sing N N 439 PRO C O doub N N 440 PRO C OXT sing N N 441 PRO CB CG sing N N 442 PRO CB HB2 sing N N 443 PRO CB HB3 sing N N 444 PRO CG CD sing N N 445 PRO CG HG2 sing N N 446 PRO CG HG3 sing N N 447 PRO CD HD2 sing N N 448 PRO CD HD3 sing N N 449 PRO OXT HXT sing N N 450 SER N CA sing N N 451 SER N H sing N N 452 SER N H2 sing N N 453 SER CA C sing N N 454 SER CA CB sing N N 455 SER CA HA sing N N 456 SER C O doub N N 457 SER C OXT sing N N 458 SER CB OG sing N N 459 SER CB HB2 sing N N 460 SER CB HB3 sing N N 461 SER OG HG sing N N 462 SER OXT HXT sing N N 463 THR N CA sing N N 464 THR N H sing N N 465 THR N H2 sing N N 466 THR CA C sing N N 467 THR CA CB sing N N 468 THR CA HA sing N N 469 THR C O doub N N 470 THR C OXT sing N N 471 THR CB OG1 sing N N 472 THR CB CG2 sing N N 473 THR CB HB sing N N 474 THR OG1 HG1 sing N N 475 THR CG2 HG21 sing N N 476 THR CG2 HG22 sing N N 477 THR CG2 HG23 sing N N 478 THR OXT HXT sing N N 479 TRP N CA sing N N 480 TRP N H sing N N 481 TRP N H2 sing N N 482 TRP CA C sing N N 483 TRP CA CB sing N N 484 TRP CA HA sing N N 485 TRP C O doub N N 486 TRP C OXT sing N N 487 TRP CB CG sing N N 488 TRP CB HB2 sing N N 489 TRP CB HB3 sing N N 490 TRP CG CD1 doub Y N 491 TRP CG CD2 sing Y N 492 TRP CD1 NE1 sing Y N 493 TRP CD1 HD1 sing N N 494 TRP CD2 CE2 doub Y N 495 TRP CD2 CE3 sing Y N 496 TRP NE1 CE2 sing Y N 497 TRP NE1 HE1 sing N N 498 TRP CE2 CZ2 sing Y N 499 TRP CE3 CZ3 doub Y N 500 TRP CE3 HE3 sing N N 501 TRP CZ2 CH2 doub Y N 502 TRP CZ2 HZ2 sing N N 503 TRP CZ3 CH2 sing Y N 504 TRP CZ3 HZ3 sing N N 505 TRP CH2 HH2 sing N N 506 TRP OXT HXT sing N N 507 TYR N CA sing N N 508 TYR N H sing N N 509 TYR N H2 sing N N 510 TYR CA C sing N N 511 TYR CA CB sing N N 512 TYR CA HA sing N N 513 TYR C O doub N N 514 TYR C OXT sing N N 515 TYR CB CG sing N N 516 TYR CB HB2 sing N N 517 TYR CB HB3 sing N N 518 TYR CG CD1 doub Y N 519 TYR CG CD2 sing Y N 520 TYR CD1 CE1 sing Y N 521 TYR CD1 HD1 sing N N 522 TYR CD2 CE2 doub Y N 523 TYR CD2 HD2 sing N N 524 TYR CE1 CZ doub Y N 525 TYR CE1 HE1 sing N N 526 TYR CE2 CZ sing Y N 527 TYR CE2 HE2 sing N N 528 TYR CZ OH sing N N 529 TYR OH HH sing N N 530 TYR OXT HXT sing N N 531 VAL N CA sing N N 532 VAL N H sing N N 533 VAL N H2 sing N N 534 VAL CA C sing N N 535 VAL CA CB sing N N 536 VAL CA HA sing N N 537 VAL C O doub N N 538 VAL C OXT sing N N 539 VAL CB CG1 sing N N 540 VAL CB CG2 sing N N 541 VAL CB HB sing N N 542 VAL CG1 HG11 sing N N 543 VAL CG1 HG12 sing N N 544 VAL CG1 HG13 sing N N 545 VAL CG2 HG21 sing N N 546 VAL CG2 HG22 sing N N 547 VAL CG2 HG23 sing N N 548 VAL OXT HXT sing N N 549 # _ndb_struct_conf_na.entry_id 8EO4 _ndb_struct_conf_na.feature 'double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DT 3 1_555 B DA 15 1_555 -0.058 -0.127 -0.042 5.903 -12.478 3.000 1 C_DT3:DA31_D C 3 ? D 31 ? 20 1 1 A DA 4 1_555 B DT 14 1_555 -0.119 -0.116 0.027 2.924 -9.993 5.449 2 C_DA4:DT30_D C 4 ? D 30 ? 20 1 1 A DA 5 1_555 B DT 13 1_555 0.072 -0.200 0.175 8.584 -10.803 6.504 3 C_DA5:DT29_D C 5 ? D 29 ? 20 1 1 A DG 6 1_555 B DC 12 1_555 -0.360 -0.175 -0.240 -5.733 -12.568 2.179 4 C_DG6:DC28_D C 6 ? D 28 ? 19 1 1 A 5CM 7 1_555 B DG 11 1_555 0.221 -0.132 -0.016 -9.618 -3.014 -0.296 5 C_5CM7:DG27_D C 7 ? D 27 ? 19 1 1 A DG 8 1_555 B 5CM 10 1_555 -0.199 -0.087 0.152 5.637 -2.181 0.516 6 C_DG8:5CM26_D C 8 ? D 26 ? 19 1 1 A DG 9 1_555 B DC 9 1_555 -0.238 -0.136 0.035 7.996 -11.054 -0.429 7 C_DG9:DC25_D C 9 ? D 25 ? 19 1 1 A DA 10 1_555 B DT 8 1_555 0.134 -0.178 -0.013 8.917 -15.443 2.122 8 C_DA10:DT24_D C 10 ? D 24 ? 20 1 1 A DA 11 1_555 B DT 7 1_555 0.083 -0.153 0.033 1.965 -17.409 5.186 9 C_DA11:DT23_D C 11 ? D 23 ? 20 1 1 A DG 12 1_555 B DC 6 1_555 -0.215 -0.109 0.088 -7.373 -16.831 -0.437 10 C_DG12:DC22_D C 12 ? D 22 ? 19 1 1 A DT 13 1_555 B DA 5 1_555 -0.044 -0.097 0.117 -7.692 -10.585 4.102 11 C_DT13:DA21_D C 13 ? D 21 ? 20 1 1 A DG 14 1_555 B DC 4 1_555 0.544 -3.426 -0.540 10.835 6.038 70.293 12 C_DG14:DC20_D C 14 ? D 20 ? ? 3 1 A DG 15 1_555 B DC 3 1_555 -0.188 -0.154 -0.144 -4.784 -11.905 -0.861 13 C_DG15:DC19_D C 15 ? D 19 ? 19 1 1 A DG 16 1_555 B DC 2 1_555 -0.298 -0.132 -0.210 -13.392 -9.492 -0.737 14 C_DG16:DC18_D C 16 ? D 18 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DT 3 1_555 B DA 15 1_555 A DA 4 1_555 B DT 14 1_555 0.514 -0.849 3.286 0.326 8.202 28.869 -3.283 -0.928 2.944 16.047 -0.638 29.989 1 CC_DT3DA4:DT30DA31_DD C 3 ? D 31 ? C 4 ? D 30 ? 1 A DA 4 1_555 B DT 14 1_555 A DA 5 1_555 B DT 13 1_555 0.411 -0.658 3.170 -1.158 -1.792 33.091 -0.861 -0.909 3.185 -3.143 2.031 33.158 2 CC_DA4DA5:DT29DT30_DD C 4 ? D 30 ? C 5 ? D 29 ? 1 A DA 5 1_555 B DT 13 1_555 A DG 6 1_555 B DC 12 1_555 -0.205 -1.190 3.641 -0.756 4.674 32.635 -2.961 0.221 3.445 8.263 1.337 32.968 3 CC_DA5DG6:DC28DT29_DD C 5 ? D 29 ? C 6 ? D 28 ? 1 A DG 6 1_555 B DC 12 1_555 A 5CM 7 1_555 B DG 11 1_555 -0.432 -1.133 3.443 -0.564 3.846 33.880 -2.563 0.643 3.305 6.572 0.964 34.096 4 CC_DG65CM7:DG27DC28_DD C 6 ? D 28 ? C 7 ? D 27 ? 1 A 5CM 7 1_555 B DG 11 1_555 A DG 8 1_555 B 5CM 10 1_555 0.894 -0.380 2.978 -1.043 6.708 19.871 -3.557 -2.846 2.657 18.746 2.913 20.988 5 CC_5CM7DG8:5CM26DG27_DD C 7 ? D 27 ? C 8 ? D 26 ? 1 A DG 8 1_555 B 5CM 10 1_555 A DG 9 1_555 B DC 9 1_555 -1.172 -0.181 3.259 -2.369 2.732 36.145 -0.674 1.547 3.304 4.390 3.807 36.320 6 CC_DG8DG9:DC255CM26_DD C 8 ? D 26 ? C 9 ? D 25 ? 1 A DG 9 1_555 B DC 9 1_555 A DA 10 1_555 B DT 8 1_555 0.215 -0.418 3.245 0.664 2.731 31.610 -1.260 -0.272 3.202 5.001 -1.216 31.731 7 CC_DG9DA10:DT24DC25_DD C 9 ? D 25 ? C 10 ? D 24 ? 1 A DA 10 1_555 B DT 8 1_555 A DA 11 1_555 B DT 7 1_555 -0.109 -0.080 3.319 -0.110 2.531 35.319 -0.509 0.162 3.306 4.165 0.182 35.407 8 CC_DA10DA11:DT23DT24_DD C 10 ? D 24 ? C 11 ? D 23 ? 1 A DA 11 1_555 B DT 7 1_555 A DG 12 1_555 B DC 6 1_555 -0.106 -0.873 3.448 -4.076 5.298 39.133 -1.929 -0.338 3.301 7.841 6.031 39.677 9 CC_DA11DG12:DC22DT23_DD C 11 ? D 23 ? C 12 ? D 22 ? 1 A DG 12 1_555 B DC 6 1_555 A DT 13 1_555 B DA 5 1_555 -0.906 -1.022 3.330 -0.533 1.443 25.948 -2.675 1.867 3.287 3.209 1.185 25.993 10 CC_DG12DT13:DA21DC22_DD C 12 ? D 22 ? C 13 ? D 21 ? 1 A DT 13 1_555 B DA 5 1_555 A DG 14 1_555 B DC 4 1_555 -2.071 3.405 -1.040 174.314 -13.529 -114.073 -1.711 -1.131 0.393 6.797 87.571 -177.192 11 CC_DT13DG14:DC20DA21_DD C 13 ? D 21 ? C 14 ? D 20 ? 1 A DG 14 1_555 B DC 4 1_555 A DG 15 1_555 B DC 3 1_555 0.220 3.980 -0.871 -135.859 105.812 -172.929 -1.972 0.133 -1.009 -52.911 -67.935 -179.520 12 CC_DG14DG15:DC19DC20_DD C 14 ? D 20 ? C 15 ? D 19 ? 1 A DG 15 1_555 B DC 3 1_555 A DG 16 1_555 B DC 2 1_555 0.891 -0.356 3.536 1.725 2.445 30.956 -1.172 -1.305 3.541 4.567 -3.222 31.096 13 CC_DG15DG16:DC18DC19_DD C 15 ? D 19 ? C 16 ? D 18 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Heart, Lung, and Blood Institute (NIH/NHLBI)' 'United States' HL155178 1 'National Science Foundation (NSF, United States)' 'United States' MCB2028902 2 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM137160 3 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM111749 4 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id 5CM _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id 5CM _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'SODIUM ION' NA 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 8E3K _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'mass spectrometry' _pdbx_struct_assembly_auth_evidence.details ? # _space_group.name_H-M_alt 'P 1 21 1' _space_group.name_Hall 'P 2yb' _space_group.IT_number 4 _space_group.crystal_system monoclinic _space_group.id 1 #