data_8EP6 # _entry.id 8EP6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8EP6 pdb_00008ep6 10.2210/pdb8ep6/pdb WWPDB D_1000268399 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'The same protein without a ligand bound' 7K3M unspecified TargetTrack . IDP97247 unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8EP6 _pdbx_database_status.recvd_initial_deposition_date 2022-10-05 _pdbx_database_status.SG_entry Y _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Maltseva, N.' 1 ? 'Kim, Y.' 2 ? 'Endres, M.' 3 ? 'Joachimiak, A.' 4 ? 'Center for Structural Genomics of Infectious Diseases (CSGID)' 5 ? 'Center for Structural Biology of Infectious Diseases (CSBID)' 6 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Crystal Structure of the Beta-lactamase Class D from Chitinophaga pinensis in the complex with Avibactam.' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Maltseva, N.' 1 ? primary 'Kim, Y.' 2 ? primary 'Endres, M.' 3 ? primary 'Joachimiak, A.' 4 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8EP6 _cell.details ? _cell.formula_units_Z ? _cell.length_a 48.816 _cell.length_a_esd ? _cell.length_b 67.864 _cell.length_b_esd ? _cell.length_c 68.698 _cell.length_c_esd ? _cell.volume 227586.102 _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8EP6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Beta-lactamase Class D Cpin_0907' 29607.988 1 ? ? ? ? 2 non-polymer syn '(2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide' 267.260 1 ? ? ? ? 3 non-polymer syn 'ACETIC ACID' 60.052 1 ? ? ? ? 4 water nat water 18.015 95 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;NNVENEKSWEKYFAEYKVEGCF(MSE)LFNNSQGTFKVYNLERSQQRFLPASTF(KCX)IFNSLVGLETGVIKDTSFVIP WDGVTRD(MSE)PEWNHDLS(MSE)QQAFRVSAVPYFQEVARRITKPV(MSE)QHWLDTVKFGN(MSE)KISKIDTFWLD NSLQISPDEELGFVKKLYFDQLPFHKVT(MSE)QNVRQV(MSE)L(MSE)EKKPEYELSYKTG(MSE)GFSGPKTIGWIT GWIEENGHPSFFVLNIETENKSLD(MSE)RTVR(MSE)NILRNLLTDAGYFKG(MSE)K ; _entity_poly.pdbx_seq_one_letter_code_can ;NNVENEKSWEKYFAEYKVEGCFMLFNNSQGTFKVYNLERSQQRFLPASTFKIFNSLVGLETGVIKDTSFVIPWDGVTRDM PEWNHDLSMQQAFRVSAVPYFQEVARRITKPVMQHWLDTVKFGNMKISKIDTFWLDNSLQISPDEELGFVKKLYFDQLPF HKVTMQNVRQVMLMEKKPEYELSYKTGMGFSGPKTIGWITGWIEENGHPSFFVLNIETENKSLDMRTVRMNILRNLLTDA GYFKGMK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier IDP97247 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 ASN n 1 3 VAL n 1 4 GLU n 1 5 ASN n 1 6 GLU n 1 7 LYS n 1 8 SER n 1 9 TRP n 1 10 GLU n 1 11 LYS n 1 12 TYR n 1 13 PHE n 1 14 ALA n 1 15 GLU n 1 16 TYR n 1 17 LYS n 1 18 VAL n 1 19 GLU n 1 20 GLY n 1 21 CYS n 1 22 PHE n 1 23 MSE n 1 24 LEU n 1 25 PHE n 1 26 ASN n 1 27 ASN n 1 28 SER n 1 29 GLN n 1 30 GLY n 1 31 THR n 1 32 PHE n 1 33 LYS n 1 34 VAL n 1 35 TYR n 1 36 ASN n 1 37 LEU n 1 38 GLU n 1 39 ARG n 1 40 SER n 1 41 GLN n 1 42 GLN n 1 43 ARG n 1 44 PHE n 1 45 LEU n 1 46 PRO n 1 47 ALA n 1 48 SER n 1 49 THR n 1 50 PHE n 1 51 KCX n 1 52 ILE n 1 53 PHE n 1 54 ASN n 1 55 SER n 1 56 LEU n 1 57 VAL n 1 58 GLY n 1 59 LEU n 1 60 GLU n 1 61 THR n 1 62 GLY n 1 63 VAL n 1 64 ILE n 1 65 LYS n 1 66 ASP n 1 67 THR n 1 68 SER n 1 69 PHE n 1 70 VAL n 1 71 ILE n 1 72 PRO n 1 73 TRP n 1 74 ASP n 1 75 GLY n 1 76 VAL n 1 77 THR n 1 78 ARG n 1 79 ASP n 1 80 MSE n 1 81 PRO n 1 82 GLU n 1 83 TRP n 1 84 ASN n 1 85 HIS n 1 86 ASP n 1 87 LEU n 1 88 SER n 1 89 MSE n 1 90 GLN n 1 91 GLN n 1 92 ALA n 1 93 PHE n 1 94 ARG n 1 95 VAL n 1 96 SER n 1 97 ALA n 1 98 VAL n 1 99 PRO n 1 100 TYR n 1 101 PHE n 1 102 GLN n 1 103 GLU n 1 104 VAL n 1 105 ALA n 1 106 ARG n 1 107 ARG n 1 108 ILE n 1 109 THR n 1 110 LYS n 1 111 PRO n 1 112 VAL n 1 113 MSE n 1 114 GLN n 1 115 HIS n 1 116 TRP n 1 117 LEU n 1 118 ASP n 1 119 THR n 1 120 VAL n 1 121 LYS n 1 122 PHE n 1 123 GLY n 1 124 ASN n 1 125 MSE n 1 126 LYS n 1 127 ILE n 1 128 SER n 1 129 LYS n 1 130 ILE n 1 131 ASP n 1 132 THR n 1 133 PHE n 1 134 TRP n 1 135 LEU n 1 136 ASP n 1 137 ASN n 1 138 SER n 1 139 LEU n 1 140 GLN n 1 141 ILE n 1 142 SER n 1 143 PRO n 1 144 ASP n 1 145 GLU n 1 146 GLU n 1 147 LEU n 1 148 GLY n 1 149 PHE n 1 150 VAL n 1 151 LYS n 1 152 LYS n 1 153 LEU n 1 154 TYR n 1 155 PHE n 1 156 ASP n 1 157 GLN n 1 158 LEU n 1 159 PRO n 1 160 PHE n 1 161 HIS n 1 162 LYS n 1 163 VAL n 1 164 THR n 1 165 MSE n 1 166 GLN n 1 167 ASN n 1 168 VAL n 1 169 ARG n 1 170 GLN n 1 171 VAL n 1 172 MSE n 1 173 LEU n 1 174 MSE n 1 175 GLU n 1 176 LYS n 1 177 LYS n 1 178 PRO n 1 179 GLU n 1 180 TYR n 1 181 GLU n 1 182 LEU n 1 183 SER n 1 184 TYR n 1 185 LYS n 1 186 THR n 1 187 GLY n 1 188 MSE n 1 189 GLY n 1 190 PHE n 1 191 SER n 1 192 GLY n 1 193 PRO n 1 194 LYS n 1 195 THR n 1 196 ILE n 1 197 GLY n 1 198 TRP n 1 199 ILE n 1 200 THR n 1 201 GLY n 1 202 TRP n 1 203 ILE n 1 204 GLU n 1 205 GLU n 1 206 ASN n 1 207 GLY n 1 208 HIS n 1 209 PRO n 1 210 SER n 1 211 PHE n 1 212 PHE n 1 213 VAL n 1 214 LEU n 1 215 ASN n 1 216 ILE n 1 217 GLU n 1 218 THR n 1 219 GLU n 1 220 ASN n 1 221 LYS n 1 222 SER n 1 223 LEU n 1 224 ASP n 1 225 MSE n 1 226 ARG n 1 227 THR n 1 228 VAL n 1 229 ARG n 1 230 MSE n 1 231 ASN n 1 232 ILE n 1 233 LEU n 1 234 ARG n 1 235 ASN n 1 236 LEU n 1 237 LEU n 1 238 THR n 1 239 ASP n 1 240 ALA n 1 241 GLY n 1 242 TYR n 1 243 PHE n 1 244 LYS n 1 245 GLY n 1 246 MSE n 1 247 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 247 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'blaOXA, FEF09_01595' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'DSM 2588' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Chitinophaga pinensis DSM 2588' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 485918 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant gold _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG53 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8EP6 _struct_ref.pdbx_db_accession 8EP6 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8EP6 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 247 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 8EP6 _struct_ref_seq.db_align_beg 21 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 267 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 21 _struct_ref_seq.pdbx_auth_seq_align_end 267 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACY non-polymer . 'ACETIC ACID' ? 'C2 H4 O2' 60.052 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 KCX 'L-peptide linking' n 'LYSINE NZ-CARBOXYLIC ACID' ? 'C7 H14 N2 O4' 190.197 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NXL non-polymer . '(2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide' 'avibactam, bound form; NXL104, bound form' 'C7 H13 N3 O6 S' 267.260 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8EP6 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.96 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 37.21 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M imidazole, pH 6.5, 0.2 M sodium acetate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 X 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-12-16 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97926 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97926 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 16.55 _reflns.entry_id 8EP6 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.50 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 37009 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.5 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.2 _reflns.pdbx_Rmerge_I_obs 0.131 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 16.0 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.056 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.985 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? _reflns.pdbx_CC_split_method ? # _reflns_shell.d_res_high 1.50 _reflns_shell.d_res_low 1.53 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.2 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1838 _reflns_shell.percent_possible_all 99.1 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.845 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 5.8 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.375 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.769 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 22.61 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8EP6 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.50 _refine.ls_d_res_low 34.35 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 36913 _refine.ls_number_reflns_R_free 1865 _refine.ls_number_reflns_R_work 35048 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.16 _refine.ls_percent_reflns_R_free 5.05 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1470 _refine.ls_R_factor_R_free 0.1867 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1449 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.38 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 16.9991 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1413 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.50 _refine_hist.d_res_low 34.35 _refine_hist.number_atoms_solvent 95 _refine_hist.number_atoms_total 2144 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 2028 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 21 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0125 ? 2177 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.2487 ? 2947 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0743 ? 305 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0108 ? 380 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 13.3607 ? 823 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.50 1.54 . . 145 2544 95.69 . . . 0.2428 . 0.1668 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.54 1.59 . . 159 2648 99.12 . . . 0.2228 . 0.1534 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.59 1.64 . . 150 2670 99.44 . . . 0.2159 . 0.1356 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.64 1.70 . . 121 2678 99.50 . . . 0.2097 . 0.1354 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.70 1.76 . . 143 2653 99.40 . . . 0.2029 . 0.1301 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.76 1.84 . . 140 2688 99.89 . . . 0.1783 . 0.1202 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.84 1.94 . . 129 2717 99.68 . . . 0.1819 . 0.1123 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.94 2.06 . . 118 2701 99.47 . . . 0.1511 . 0.1182 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.06 2.22 . . 156 2712 99.69 . . . 0.1711 . 0.1284 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.22 2.45 . . 137 2723 99.79 . . . 0.1748 . 0.1380 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.45 2.80 . . 167 2693 99.48 . . . 0.2028 . 0.1573 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.80 3.53 . . 138 2753 98.80 . . . 0.2008 . 0.1639 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.53 34.35 . . 162 2868 99.08 . . . 0.1753 . 0.1539 . . . . . . . . . . . # _struct.entry_id 8EP6 _struct.title 'Crystal Structure of the Beta-lactamase Class D from Chitinophaga pinensis in complex with Avibactam' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8EP6 _struct_keywords.text ;beta lactamase class D, avibactam, antibiotic resistance, transpeptidase, Center for Structural Biology of Infectious Diseases, CSBID, Structural Genomics, Center for Structural Genomics of Infectious Diseases, CSGID, HYDROLASE-INHIBITOR complex ; _struct_keywords.pdbx_keywords HYDROLASE/INHIBITOR # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 TRP A 9 ? GLU A 15 ? TRP A 29 GLU A 35 1 ? 7 HELX_P HELX_P2 AA2 ASN A 36 ? GLN A 41 ? ASN A 56 GLN A 61 1 ? 6 HELX_P HELX_P3 AA3 PRO A 46 ? THR A 49 ? PRO A 66 THR A 69 5 ? 4 HELX_P HELX_P4 AA4 PHE A 50 ? THR A 61 ? PHE A 70 THR A 81 1 ? 12 HELX_P HELX_P5 AA5 MSE A 80 ? ASN A 84 ? MSE A 100 ASN A 104 5 ? 5 HELX_P HELX_P6 AA6 MSE A 89 ? SER A 96 ? MSE A 109 SER A 116 1 ? 8 HELX_P HELX_P7 AA7 ALA A 97 ? THR A 109 ? ALA A 117 THR A 129 1 ? 13 HELX_P HELX_P8 AA8 THR A 109 ? LYS A 121 ? THR A 129 LYS A 141 1 ? 13 HELX_P HELX_P9 AA9 SER A 142 ? PHE A 155 ? SER A 162 PHE A 175 1 ? 14 HELX_P HELX_P10 AB1 HIS A 161 ? MSE A 172 ? HIS A 181 MSE A 192 1 ? 12 HELX_P HELX_P11 AB2 ASP A 224 ? ALA A 240 ? ASP A 244 ALA A 260 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A PHE 22 C ? ? ? 1_555 A MSE 23 N ? ? A PHE 42 A MSE 43 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale2 covale both ? A MSE 23 C ? ? ? 1_555 A LEU 24 N ? ? A MSE 43 A LEU 44 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale3 covale none ? A SER 48 OG ? ? ? 1_555 B NXL . CAN ? ? A SER 68 A NXL 301 1_555 ? ? ? ? ? ? ? 1.375 ? ? covale4 covale both ? A PHE 50 C ? ? ? 1_555 A KCX 51 N ? ? A PHE 70 A KCX 71 1_555 ? ? ? ? ? ? ? 1.348 ? ? covale5 covale both ? A KCX 51 C ? ? ? 1_555 A ILE 52 N ? ? A KCX 71 A ILE 72 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale6 covale both ? A ASP 79 C ? ? ? 1_555 A MSE 80 N ? ? A ASP 99 A MSE 100 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale7 covale both ? A MSE 80 C ? ? ? 1_555 A PRO 81 N ? ? A MSE 100 A PRO 101 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale8 covale both ? A SER 88 C ? ? ? 1_555 A MSE 89 N A ? A SER 108 A MSE 109 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale9 covale both ? A SER 88 C ? ? ? 1_555 A MSE 89 N B ? A SER 108 A MSE 109 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale10 covale both ? A MSE 89 C A ? ? 1_555 A GLN 90 N ? ? A MSE 109 A GLN 110 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale11 covale both ? A MSE 89 C B ? ? 1_555 A GLN 90 N ? ? A MSE 109 A GLN 110 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale12 covale both ? A VAL 112 C ? ? ? 1_555 A MSE 113 N ? ? A VAL 132 A MSE 133 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale13 covale both ? A MSE 113 C ? ? ? 1_555 A GLN 114 N ? ? A MSE 133 A GLN 134 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale14 covale both ? A ASN 124 C ? ? ? 1_555 A MSE 125 N ? ? A ASN 144 A MSE 145 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale15 covale both ? A MSE 125 C ? ? ? 1_555 A LYS 126 N A ? A MSE 145 A LYS 146 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale16 covale both ? A MSE 125 C ? ? ? 1_555 A LYS 126 N B ? A MSE 145 A LYS 146 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale17 covale both ? A THR 164 C ? ? ? 1_555 A MSE 165 N ? ? A THR 184 A MSE 185 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale18 covale both ? A MSE 165 C ? ? ? 1_555 A GLN 166 N ? ? A MSE 185 A GLN 186 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale19 covale both ? A VAL 171 C ? ? ? 1_555 A MSE 172 N ? ? A VAL 191 A MSE 192 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale20 covale both ? A MSE 172 C ? ? ? 1_555 A LEU 173 N ? ? A MSE 192 A LEU 193 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale21 covale both ? A LEU 173 C ? ? ? 1_555 A MSE 174 N ? ? A LEU 193 A MSE 194 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale22 covale both ? A MSE 174 C ? ? ? 1_555 A GLU 175 N ? ? A MSE 194 A GLU 195 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale23 covale both ? A GLY 187 C ? ? ? 1_555 A MSE 188 N ? ? A GLY 207 A MSE 208 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale24 covale both ? A MSE 188 C ? ? ? 1_555 A GLY 189 N ? ? A MSE 208 A GLY 209 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale25 covale both ? A ASP 224 C ? ? ? 1_555 A MSE 225 N ? ? A ASP 244 A MSE 245 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale26 covale both ? A MSE 225 C ? ? ? 1_555 A ARG 226 N ? ? A MSE 245 A ARG 246 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale27 covale both ? A ARG 229 C ? ? ? 1_555 A MSE 230 N ? ? A ARG 249 A MSE 250 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale28 covale both ? A MSE 230 C ? ? ? 1_555 A ASN 231 N ? ? A MSE 250 A ASN 251 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale29 covale both ? A GLY 245 C ? ? ? 1_555 A MSE 246 N ? ? A GLY 265 A MSE 266 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale30 covale both ? A MSE 246 C ? ? ? 1_555 A LYS 247 N ? ? A MSE 266 A LYS 267 1_555 ? ? ? ? ? ? ? 1.326 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 7 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLU A 4 ? ASN A 5 ? GLU A 24 ASN A 25 AA1 2 THR A 31 ? TYR A 35 ? THR A 51 TYR A 55 AA1 3 GLU A 19 ? ASN A 26 ? GLU A 39 ASN A 46 AA1 4 HIS A 208 ? THR A 218 ? HIS A 228 THR A 238 AA1 5 LYS A 194 ? GLU A 205 ? LYS A 214 GLU A 225 AA1 6 TYR A 180 ? SER A 191 ? TYR A 200 SER A 211 AA1 7 LEU A 173 ? LYS A 177 ? LEU A 193 LYS A 197 AA2 1 VAL A 70 ? ILE A 71 ? VAL A 90 ILE A 91 AA2 2 LEU A 87 ? SER A 88 ? LEU A 107 SER A 108 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLU A 4 ? N GLU A 24 O PHE A 32 ? O PHE A 52 AA1 2 3 O THR A 31 ? O THR A 51 N ASN A 26 ? N ASN A 46 AA1 3 4 N PHE A 25 ? N PHE A 45 O PHE A 211 ? O PHE A 231 AA1 4 5 O ILE A 216 ? O ILE A 236 N GLY A 197 ? N GLY A 217 AA1 5 6 O ILE A 196 ? O ILE A 216 N GLY A 189 ? N GLY A 209 AA1 6 7 O LEU A 182 ? O LEU A 202 N GLU A 175 ? N GLU A 195 AA2 1 2 N ILE A 71 ? N ILE A 91 O LEU A 87 ? O LEU A 107 # _atom_sites.entry_id 8EP6 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.020485 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014735 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014556 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? SE ? ? 26.02326 7.89457 ? ? 1.54240 29.12501 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 21 ? ? ? A . n A 1 2 ASN 2 22 ? ? ? A . n A 1 3 VAL 3 23 23 VAL VAL A . n A 1 4 GLU 4 24 24 GLU GLU A . n A 1 5 ASN 5 25 25 ASN ASN A . n A 1 6 GLU 6 26 26 GLU GLU A . n A 1 7 LYS 7 27 27 LYS LYS A . n A 1 8 SER 8 28 28 SER SER A . n A 1 9 TRP 9 29 29 TRP TRP A . n A 1 10 GLU 10 30 30 GLU GLU A . n A 1 11 LYS 11 31 31 LYS LYS A . n A 1 12 TYR 12 32 32 TYR TYR A . n A 1 13 PHE 13 33 33 PHE PHE A . n A 1 14 ALA 14 34 34 ALA ALA A . n A 1 15 GLU 15 35 35 GLU GLU A . n A 1 16 TYR 16 36 36 TYR TYR A . n A 1 17 LYS 17 37 37 LYS LYS A . n A 1 18 VAL 18 38 38 VAL VAL A . n A 1 19 GLU 19 39 39 GLU GLU A . n A 1 20 GLY 20 40 40 GLY GLY A . n A 1 21 CYS 21 41 41 CYS CYS A . n A 1 22 PHE 22 42 42 PHE PHE A . n A 1 23 MSE 23 43 43 MSE MSE A . n A 1 24 LEU 24 44 44 LEU LEU A . n A 1 25 PHE 25 45 45 PHE PHE A . n A 1 26 ASN 26 46 46 ASN ASN A . n A 1 27 ASN 27 47 47 ASN ASN A . n A 1 28 SER 28 48 48 SER SER A . n A 1 29 GLN 29 49 49 GLN GLN A . n A 1 30 GLY 30 50 50 GLY GLY A . n A 1 31 THR 31 51 51 THR THR A . n A 1 32 PHE 32 52 52 PHE PHE A . n A 1 33 LYS 33 53 53 LYS LYS A . n A 1 34 VAL 34 54 54 VAL VAL A . n A 1 35 TYR 35 55 55 TYR TYR A . n A 1 36 ASN 36 56 56 ASN ASN A . n A 1 37 LEU 37 57 57 LEU LEU A . n A 1 38 GLU 38 58 58 GLU GLU A . n A 1 39 ARG 39 59 59 ARG ARG A . n A 1 40 SER 40 60 60 SER SER A . n A 1 41 GLN 41 61 61 GLN GLN A . n A 1 42 GLN 42 62 62 GLN GLN A . n A 1 43 ARG 43 63 63 ARG ARG A . n A 1 44 PHE 44 64 64 PHE PHE A . n A 1 45 LEU 45 65 65 LEU LEU A . n A 1 46 PRO 46 66 66 PRO PRO A . n A 1 47 ALA 47 67 67 ALA ALA A . n A 1 48 SER 48 68 68 SER SER A . n A 1 49 THR 49 69 69 THR THR A . n A 1 50 PHE 50 70 70 PHE PHE A . n A 1 51 KCX 51 71 71 KCX KCX A . n A 1 52 ILE 52 72 72 ILE ILE A . n A 1 53 PHE 53 73 73 PHE PHE A . n A 1 54 ASN 54 74 74 ASN ASN A . n A 1 55 SER 55 75 75 SER SER A . n A 1 56 LEU 56 76 76 LEU LEU A . n A 1 57 VAL 57 77 77 VAL VAL A . n A 1 58 GLY 58 78 78 GLY GLY A . n A 1 59 LEU 59 79 79 LEU LEU A . n A 1 60 GLU 60 80 80 GLU GLU A . n A 1 61 THR 61 81 81 THR THR A . n A 1 62 GLY 62 82 82 GLY GLY A . n A 1 63 VAL 63 83 83 VAL VAL A . n A 1 64 ILE 64 84 84 ILE ILE A . n A 1 65 LYS 65 85 85 LYS LYS A . n A 1 66 ASP 66 86 86 ASP ASP A . n A 1 67 THR 67 87 87 THR THR A . n A 1 68 SER 68 88 88 SER SER A . n A 1 69 PHE 69 89 89 PHE PHE A . n A 1 70 VAL 70 90 90 VAL VAL A . n A 1 71 ILE 71 91 91 ILE ILE A . n A 1 72 PRO 72 92 92 PRO PRO A . n A 1 73 TRP 73 93 93 TRP TRP A . n A 1 74 ASP 74 94 94 ASP ASP A . n A 1 75 GLY 75 95 95 GLY GLY A . n A 1 76 VAL 76 96 96 VAL VAL A . n A 1 77 THR 77 97 97 THR THR A . n A 1 78 ARG 78 98 98 ARG ARG A . n A 1 79 ASP 79 99 99 ASP ASP A . n A 1 80 MSE 80 100 100 MSE MSE A . n A 1 81 PRO 81 101 101 PRO PRO A . n A 1 82 GLU 82 102 102 GLU GLU A . n A 1 83 TRP 83 103 103 TRP TRP A . n A 1 84 ASN 84 104 104 ASN ASN A . n A 1 85 HIS 85 105 105 HIS HIS A . n A 1 86 ASP 86 106 106 ASP ASP A . n A 1 87 LEU 87 107 107 LEU LEU A . n A 1 88 SER 88 108 108 SER SER A . n A 1 89 MSE 89 109 109 MSE MSE A . n A 1 90 GLN 90 110 110 GLN GLN A . n A 1 91 GLN 91 111 111 GLN GLN A . n A 1 92 ALA 92 112 112 ALA ALA A . n A 1 93 PHE 93 113 113 PHE PHE A . n A 1 94 ARG 94 114 114 ARG ARG A . n A 1 95 VAL 95 115 115 VAL VAL A . n A 1 96 SER 96 116 116 SER SER A . n A 1 97 ALA 97 117 117 ALA ALA A . n A 1 98 VAL 98 118 118 VAL VAL A . n A 1 99 PRO 99 119 119 PRO PRO A . n A 1 100 TYR 100 120 120 TYR TYR A . n A 1 101 PHE 101 121 121 PHE PHE A . n A 1 102 GLN 102 122 122 GLN GLN A . n A 1 103 GLU 103 123 123 GLU GLU A . n A 1 104 VAL 104 124 124 VAL VAL A . n A 1 105 ALA 105 125 125 ALA ALA A . n A 1 106 ARG 106 126 126 ARG ARG A . n A 1 107 ARG 107 127 127 ARG ARG A . n A 1 108 ILE 108 128 128 ILE ILE A . n A 1 109 THR 109 129 129 THR THR A . n A 1 110 LYS 110 130 130 LYS LYS A . n A 1 111 PRO 111 131 131 PRO PRO A . n A 1 112 VAL 112 132 132 VAL VAL A . n A 1 113 MSE 113 133 133 MSE MSE A . n A 1 114 GLN 114 134 134 GLN GLN A . n A 1 115 HIS 115 135 135 HIS HIS A . n A 1 116 TRP 116 136 136 TRP TRP A . n A 1 117 LEU 117 137 137 LEU LEU A . n A 1 118 ASP 118 138 138 ASP ASP A . n A 1 119 THR 119 139 139 THR THR A . n A 1 120 VAL 120 140 140 VAL VAL A . n A 1 121 LYS 121 141 141 LYS LYS A . n A 1 122 PHE 122 142 142 PHE PHE A . n A 1 123 GLY 123 143 143 GLY GLY A . n A 1 124 ASN 124 144 144 ASN ASN A . n A 1 125 MSE 125 145 145 MSE MSE A . n A 1 126 LYS 126 146 146 LYS LYS A . n A 1 127 ILE 127 147 147 ILE ILE A . n A 1 128 SER 128 148 148 SER SER A . n A 1 129 LYS 129 149 149 LYS LYS A . n A 1 130 ILE 130 150 150 ILE ILE A . n A 1 131 ASP 131 151 151 ASP ASP A . n A 1 132 THR 132 152 152 THR THR A . n A 1 133 PHE 133 153 153 PHE PHE A . n A 1 134 TRP 134 154 154 TRP TRP A . n A 1 135 LEU 135 155 155 LEU LEU A . n A 1 136 ASP 136 156 156 ASP ASP A . n A 1 137 ASN 137 157 157 ASN ASN A . n A 1 138 SER 138 158 158 SER SER A . n A 1 139 LEU 139 159 159 LEU LEU A . n A 1 140 GLN 140 160 160 GLN GLN A . n A 1 141 ILE 141 161 161 ILE ILE A . n A 1 142 SER 142 162 162 SER SER A . n A 1 143 PRO 143 163 163 PRO PRO A . n A 1 144 ASP 144 164 164 ASP ASP A . n A 1 145 GLU 145 165 165 GLU GLU A . n A 1 146 GLU 146 166 166 GLU GLU A . n A 1 147 LEU 147 167 167 LEU LEU A . n A 1 148 GLY 148 168 168 GLY GLY A . n A 1 149 PHE 149 169 169 PHE PHE A . n A 1 150 VAL 150 170 170 VAL VAL A . n A 1 151 LYS 151 171 171 LYS LYS A . n A 1 152 LYS 152 172 172 LYS LYS A . n A 1 153 LEU 153 173 173 LEU LEU A . n A 1 154 TYR 154 174 174 TYR TYR A . n A 1 155 PHE 155 175 175 PHE PHE A . n A 1 156 ASP 156 176 176 ASP ASP A . n A 1 157 GLN 157 177 177 GLN GLN A . n A 1 158 LEU 158 178 178 LEU LEU A . n A 1 159 PRO 159 179 179 PRO PRO A . n A 1 160 PHE 160 180 180 PHE PHE A . n A 1 161 HIS 161 181 181 HIS HIS A . n A 1 162 LYS 162 182 182 LYS LYS A . n A 1 163 VAL 163 183 183 VAL VAL A . n A 1 164 THR 164 184 184 THR THR A . n A 1 165 MSE 165 185 185 MSE MSE A . n A 1 166 GLN 166 186 186 GLN GLN A . n A 1 167 ASN 167 187 187 ASN ASN A . n A 1 168 VAL 168 188 188 VAL VAL A . n A 1 169 ARG 169 189 189 ARG ARG A . n A 1 170 GLN 170 190 190 GLN GLN A . n A 1 171 VAL 171 191 191 VAL VAL A . n A 1 172 MSE 172 192 192 MSE MSE A . n A 1 173 LEU 173 193 193 LEU LEU A . n A 1 174 MSE 174 194 194 MSE MSE A . n A 1 175 GLU 175 195 195 GLU GLU A . n A 1 176 LYS 176 196 196 LYS LYS A . n A 1 177 LYS 177 197 197 LYS LYS A . n A 1 178 PRO 178 198 198 PRO PRO A . n A 1 179 GLU 179 199 199 GLU GLU A . n A 1 180 TYR 180 200 200 TYR TYR A . n A 1 181 GLU 181 201 201 GLU GLU A . n A 1 182 LEU 182 202 202 LEU LEU A . n A 1 183 SER 183 203 203 SER SER A . n A 1 184 TYR 184 204 204 TYR TYR A . n A 1 185 LYS 185 205 205 LYS LYS A . n A 1 186 THR 186 206 206 THR THR A . n A 1 187 GLY 187 207 207 GLY GLY A . n A 1 188 MSE 188 208 208 MSE MSE A . n A 1 189 GLY 189 209 209 GLY GLY A . n A 1 190 PHE 190 210 210 PHE PHE A . n A 1 191 SER 191 211 211 SER SER A . n A 1 192 GLY 192 212 212 GLY GLY A . n A 1 193 PRO 193 213 213 PRO PRO A . n A 1 194 LYS 194 214 214 LYS LYS A . n A 1 195 THR 195 215 215 THR THR A . n A 1 196 ILE 196 216 216 ILE ILE A . n A 1 197 GLY 197 217 217 GLY GLY A . n A 1 198 TRP 198 218 218 TRP TRP A . n A 1 199 ILE 199 219 219 ILE ILE A . n A 1 200 THR 200 220 220 THR THR A . n A 1 201 GLY 201 221 221 GLY GLY A . n A 1 202 TRP 202 222 222 TRP TRP A . n A 1 203 ILE 203 223 223 ILE ILE A . n A 1 204 GLU 204 224 224 GLU GLU A . n A 1 205 GLU 205 225 225 GLU GLU A . n A 1 206 ASN 206 226 226 ASN ASN A . n A 1 207 GLY 207 227 227 GLY GLY A . n A 1 208 HIS 208 228 228 HIS HIS A . n A 1 209 PRO 209 229 229 PRO PRO A . n A 1 210 SER 210 230 230 SER SER A . n A 1 211 PHE 211 231 231 PHE PHE A . n A 1 212 PHE 212 232 232 PHE PHE A . n A 1 213 VAL 213 233 233 VAL VAL A . n A 1 214 LEU 214 234 234 LEU LEU A . n A 1 215 ASN 215 235 235 ASN ASN A . n A 1 216 ILE 216 236 236 ILE ILE A . n A 1 217 GLU 217 237 237 GLU GLU A . n A 1 218 THR 218 238 238 THR THR A . n A 1 219 GLU 219 239 239 GLU GLU A . n A 1 220 ASN 220 240 240 ASN ASN A . n A 1 221 LYS 221 241 241 LYS LYS A . n A 1 222 SER 222 242 242 SER SER A . n A 1 223 LEU 223 243 243 LEU LEU A . n A 1 224 ASP 224 244 244 ASP ASP A . n A 1 225 MSE 225 245 245 MSE MSE A . n A 1 226 ARG 226 246 246 ARG ARG A . n A 1 227 THR 227 247 247 THR THR A . n A 1 228 VAL 228 248 248 VAL VAL A . n A 1 229 ARG 229 249 249 ARG ARG A . n A 1 230 MSE 230 250 250 MSE MSE A . n A 1 231 ASN 231 251 251 ASN ASN A . n A 1 232 ILE 232 252 252 ILE ILE A . n A 1 233 LEU 233 253 253 LEU LEU A . n A 1 234 ARG 234 254 254 ARG ARG A . n A 1 235 ASN 235 255 255 ASN ASN A . n A 1 236 LEU 236 256 256 LEU LEU A . n A 1 237 LEU 237 257 257 LEU LEU A . n A 1 238 THR 238 258 258 THR THR A . n A 1 239 ASP 239 259 259 ASP ASP A . n A 1 240 ALA 240 260 260 ALA ALA A . n A 1 241 GLY 241 261 261 GLY GLY A . n A 1 242 TYR 242 262 262 TYR TYR A . n A 1 243 PHE 243 263 263 PHE PHE A . n A 1 244 LYS 244 264 264 LYS LYS A . n A 1 245 GLY 245 265 265 GLY GLY A . n A 1 246 MSE 246 266 266 MSE MSE A . n A 1 247 LYS 247 267 267 LYS LYS A . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email andrzejj@anl.gov _pdbx_contact_author.name_first Andrzej _pdbx_contact_author.name_last Joachimiak _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-2535-6209 # loop_ _pdbx_SG_project.id _pdbx_SG_project.project_name _pdbx_SG_project.full_name_of_center _pdbx_SG_project.initial_of_center 1 'NIAID, National Institute of Allergy and Infectious Diseases' 'Center for Structural Genomics of Infectious Diseases' CSGID 2 'NIAID, National Institute of Allergy and Infectious Diseases' 'Center for Structural Biology of Infectious Diseases' CSBID # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NXL 1 301 271 NXL NXL A . C 3 ACY 1 302 272 ACY ACY A . D 4 HOH 1 401 98 HOH HOH A . D 4 HOH 2 402 17 HOH HOH A . D 4 HOH 3 403 9 HOH HOH A . D 4 HOH 4 404 87 HOH HOH A . D 4 HOH 5 405 40 HOH HOH A . D 4 HOH 6 406 12 HOH HOH A . D 4 HOH 7 407 46 HOH HOH A . D 4 HOH 8 408 56 HOH HOH A . D 4 HOH 9 409 90 HOH HOH A . D 4 HOH 10 410 24 HOH HOH A . D 4 HOH 11 411 3 HOH HOH A . D 4 HOH 12 412 44 HOH HOH A . D 4 HOH 13 413 59 HOH HOH A . D 4 HOH 14 414 91 HOH HOH A . D 4 HOH 15 415 49 HOH HOH A . D 4 HOH 16 416 4 HOH HOH A . D 4 HOH 17 417 53 HOH HOH A . D 4 HOH 18 418 13 HOH HOH A . D 4 HOH 19 419 60 HOH HOH A . D 4 HOH 20 420 79 HOH HOH A . D 4 HOH 21 421 6 HOH HOH A . D 4 HOH 22 422 85 HOH HOH A . D 4 HOH 23 423 22 HOH HOH A . D 4 HOH 24 424 43 HOH HOH A . D 4 HOH 25 425 29 HOH HOH A . D 4 HOH 26 426 37 HOH HOH A . D 4 HOH 27 427 38 HOH HOH A . D 4 HOH 28 428 80 HOH HOH A . D 4 HOH 29 429 97 HOH HOH A . D 4 HOH 30 430 2 HOH HOH A . D 4 HOH 31 431 27 HOH HOH A . D 4 HOH 32 432 31 HOH HOH A . D 4 HOH 33 433 26 HOH HOH A . D 4 HOH 34 434 45 HOH HOH A . D 4 HOH 35 435 48 HOH HOH A . D 4 HOH 36 436 15 HOH HOH A . D 4 HOH 37 437 18 HOH HOH A . D 4 HOH 38 438 96 HOH HOH A . D 4 HOH 39 439 89 HOH HOH A . D 4 HOH 40 440 64 HOH HOH A . D 4 HOH 41 441 51 HOH HOH A . D 4 HOH 42 442 68 HOH HOH A . D 4 HOH 43 443 50 HOH HOH A . D 4 HOH 44 444 94 HOH HOH A . D 4 HOH 45 445 76 HOH HOH A . D 4 HOH 46 446 47 HOH HOH A . D 4 HOH 47 447 42 HOH HOH A . D 4 HOH 48 448 69 HOH HOH A . D 4 HOH 49 449 20 HOH HOH A . D 4 HOH 50 450 21 HOH HOH A . D 4 HOH 51 451 54 HOH HOH A . D 4 HOH 52 452 86 HOH HOH A . D 4 HOH 53 453 65 HOH HOH A . D 4 HOH 54 454 63 HOH HOH A . D 4 HOH 55 455 34 HOH HOH A . D 4 HOH 56 456 41 HOH HOH A . D 4 HOH 57 457 32 HOH HOH A . D 4 HOH 58 458 8 HOH HOH A . D 4 HOH 59 459 52 HOH HOH A . D 4 HOH 60 460 14 HOH HOH A . D 4 HOH 61 461 5 HOH HOH A . D 4 HOH 62 462 84 HOH HOH A . D 4 HOH 63 463 78 HOH HOH A . D 4 HOH 64 464 71 HOH HOH A . D 4 HOH 65 465 36 HOH HOH A . D 4 HOH 66 466 83 HOH HOH A . D 4 HOH 67 467 10 HOH HOH A . D 4 HOH 68 468 33 HOH HOH A . D 4 HOH 69 469 67 HOH HOH A . D 4 HOH 70 470 23 HOH HOH A . D 4 HOH 71 471 28 HOH HOH A . D 4 HOH 72 472 95 HOH HOH A . D 4 HOH 73 473 72 HOH HOH A . D 4 HOH 74 474 39 HOH HOH A . D 4 HOH 75 475 30 HOH HOH A . D 4 HOH 76 476 62 HOH HOH A . D 4 HOH 77 477 77 HOH HOH A . D 4 HOH 78 478 57 HOH HOH A . D 4 HOH 79 479 73 HOH HOH A . D 4 HOH 80 480 92 HOH HOH A . D 4 HOH 81 481 35 HOH HOH A . D 4 HOH 82 482 1 HOH HOH A . D 4 HOH 83 483 93 HOH HOH A . D 4 HOH 84 484 75 HOH HOH A . D 4 HOH 85 485 55 HOH HOH A . D 4 HOH 86 486 61 HOH HOH A . D 4 HOH 87 487 66 HOH HOH A . D 4 HOH 88 488 70 HOH HOH A . D 4 HOH 89 489 88 HOH HOH A . D 4 HOH 90 490 25 HOH HOH A . D 4 HOH 91 491 81 HOH HOH A . D 4 HOH 92 492 74 HOH HOH A . D 4 HOH 93 493 11 HOH HOH A . D 4 HOH 94 494 82 HOH HOH A . D 4 HOH 95 495 58 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 23 A MSE 43 ? MET 'modified residue' 2 A KCX 51 A KCX 71 ? LYS 'modified residue' 3 A MSE 80 A MSE 100 ? MET 'modified residue' 4 A MSE 89 A MSE 109 ? MET 'modified residue' 5 A MSE 113 A MSE 133 ? MET 'modified residue' 6 A MSE 125 A MSE 145 ? MET 'modified residue' 7 A MSE 165 A MSE 185 ? MET 'modified residue' 8 A MSE 172 A MSE 192 ? MET 'modified residue' 9 A MSE 174 A MSE 194 ? MET 'modified residue' 10 A MSE 188 A MSE 208 ? MET 'modified residue' 11 A MSE 225 A MSE 245 ? MET 'modified residue' 12 A MSE 230 A MSE 250 ? MET 'modified residue' 13 A MSE 246 A MSE 266 ? MET 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 10910 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-10-19 2 'Structure model' 1 1 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Other 2 2 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' audit_author 2 2 'Structure model' pdbx_SG_project # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 x+1/2,-y+1/2,-z 3 -x,y+1/2,-z+1/2 4 -x+1/2,-y,z+1/2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? MLPHARE ? ? ? . 5 # _pdbx_entry_details.entry_id 8EP6 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 56 ? ? 72.55 69.70 2 1 ALA A 67 ? ? 46.19 -136.61 3 1 ASN A 104 ? ? -90.70 54.72 4 1 THR A 129 ? ? 86.66 153.03 5 1 SER A 148 ? ? -85.32 -81.42 6 1 SER A 158 ? B -70.14 -76.72 7 1 PHE A 263 ? ? 85.06 5.31 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASN 21 ? A ASN 1 2 1 Y 1 A ASN 22 ? A ASN 2 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id NXL _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id NXL _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '(2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide' NXL 3 'ACETIC ACID' ACY 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _space_group.name_H-M_alt 'P 21 21 21' _space_group.name_Hall 'P 2ac 2ab' _space_group.IT_number 19 _space_group.crystal_system orthorhombic _space_group.id 1 #