HEADER VIRAL PROTEIN 11-OCT-22 8ERH TITLE HTLV-1 CAPSID PROTEIN C-TERMINAL DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN P24; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HTLV-1 SUBTYPE C; SOURCE 3 ORGANISM_TAXID: 402044; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: ROSETTA2; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PET-30A(+) KEYWDS CAPSID, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.J.YU,N.LI,D.A.JACQUES REVDAT 3 04-MAR-26 8ERH 1 REMARK REVDAT 2 17-DEC-25 8ERH 1 JRNL REVDAT 1 18-OCT-23 8ERH 0 JRNL AUTH R.YU,P.PHALORA,N.LI,T.BOCKING,D.A.JACQUES JRNL TITL THE HUMAN T-CELL LEUKEMIA VIRUS CAPSID PROTEIN IS A JRNL TITL 2 POTENTIAL DRUG TARGET. JRNL REF NAT COMMUN V. 16 10892 2025 JRNL REFN ESSN 2041-1723 JRNL PMID 41345105 JRNL DOI 10.1038/S41467-025-65899-2 REMARK 2 REMARK 2 RESOLUTION. 1.47 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.47 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.72 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 88216 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 4387 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.7200 - 4.5600 1.00 3048 139 0.2059 0.2530 REMARK 3 2 4.5600 - 3.6200 1.00 2886 162 0.1464 0.1609 REMARK 3 3 3.6200 - 3.1600 1.00 2872 152 0.1480 0.1567 REMARK 3 4 3.1600 - 2.8700 1.00 2867 147 0.1611 0.1788 REMARK 3 5 2.8700 - 2.6700 1.00 2848 130 0.1633 0.1792 REMARK 3 6 2.6700 - 2.5100 1.00 2844 149 0.1640 0.1837 REMARK 3 7 2.5100 - 2.3800 1.00 2808 148 0.1543 0.2011 REMARK 3 8 2.3800 - 2.2800 1.00 2791 155 0.1489 0.1569 REMARK 3 9 2.2800 - 2.1900 1.00 2842 138 0.1473 0.1896 REMARK 3 10 2.1900 - 2.1200 1.00 2841 124 0.1551 0.1745 REMARK 3 11 2.1200 - 2.0500 1.00 2813 135 0.1562 0.1823 REMARK 3 12 2.0500 - 1.9900 1.00 2806 151 0.1649 0.1802 REMARK 3 13 1.9900 - 1.9400 1.00 2771 180 0.1683 0.2305 REMARK 3 14 1.9400 - 1.8900 1.00 2768 138 0.1661 0.1968 REMARK 3 15 1.8900 - 1.8500 1.00 2808 156 0.1673 0.2023 REMARK 3 16 1.8500 - 1.8100 1.00 2827 130 0.1723 0.2121 REMARK 3 17 1.8100 - 1.7700 1.00 2798 116 0.1745 0.1918 REMARK 3 18 1.7700 - 1.7400 1.00 2781 148 0.1770 0.2107 REMARK 3 19 1.7400 - 1.7100 1.00 2792 160 0.1837 0.1918 REMARK 3 20 1.7100 - 1.6800 1.00 2778 126 0.1763 0.2079 REMARK 3 21 1.6800 - 1.6500 1.00 2822 156 0.1723 0.2275 REMARK 3 22 1.6500 - 1.6300 1.00 2728 156 0.1815 0.2000 REMARK 3 23 1.6300 - 1.6000 1.00 2783 151 0.1888 0.2227 REMARK 3 24 1.6000 - 1.5800 1.00 2783 156 0.1959 0.2436 REMARK 3 25 1.5800 - 1.5600 1.00 2783 163 0.2047 0.2321 REMARK 3 26 1.5600 - 1.5400 1.00 2751 141 0.2091 0.2324 REMARK 3 27 1.5400 - 1.5200 1.00 2776 148 0.2156 0.2578 REMARK 3 28 1.5200 - 1.5000 1.00 2767 169 0.2317 0.2258 REMARK 3 29 1.5000 - 1.4800 1.00 2769 151 0.2439 0.2335 REMARK 3 30 1.4800 - 1.4700 0.82 2278 112 0.3134 0.3313 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.920 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.29 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'C' AND RESID 128 THROUGH 207) REMARK 3 ORIGIN FOR THE GROUP (A): 5.0478 -10.0893 17.3834 REMARK 3 T TENSOR REMARK 3 T11: 0.1075 T22: 0.1357 REMARK 3 T33: 0.1337 T12: 0.0270 REMARK 3 T13: 0.0351 T23: -0.0114 REMARK 3 L TENSOR REMARK 3 L11: 2.1651 L22: 2.7089 REMARK 3 L33: 3.2385 L12: -0.3557 REMARK 3 L13: 1.1375 L23: -0.9663 REMARK 3 S TENSOR REMARK 3 S11: -0.0533 S12: -0.1344 S13: 0.0763 REMARK 3 S21: 0.1275 S22: 0.0338 S23: 0.1698 REMARK 3 S31: -0.1380 S32: -0.1233 S33: 0.0300 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 128 THROUGH 207) REMARK 3 ORIGIN FOR THE GROUP (A): -9.7605 21.6866 7.3028 REMARK 3 T TENSOR REMARK 3 T11: 0.1618 T22: 0.1093 REMARK 3 T33: 0.1103 T12: -0.0090 REMARK 3 T13: -0.0063 T23: 0.0060 REMARK 3 L TENSOR REMARK 3 L11: 3.3074 L22: 4.5471 REMARK 3 L33: 2.4091 L12: 0.4186 REMARK 3 L13: -0.0886 L23: 0.2165 REMARK 3 S TENSOR REMARK 3 S11: -0.0240 S12: 0.0012 S13: 0.2341 REMARK 3 S21: -0.2892 S22: -0.0105 S23: -0.1810 REMARK 3 S31: -0.2511 S32: 0.0494 S33: 0.0198 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 128 THROUGH 207) REMARK 3 ORIGIN FOR THE GROUP (A): -4.1753 10.5346 18.4739 REMARK 3 T TENSOR REMARK 3 T11: 0.1158 T22: 0.1227 REMARK 3 T33: 0.1092 T12: 0.0015 REMARK 3 T13: -0.0245 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 2.5351 L22: 3.7390 REMARK 3 L33: 2.9498 L12: -0.0822 REMARK 3 L13: -0.9373 L23: 1.0853 REMARK 3 S TENSOR REMARK 3 S11: 0.0411 S12: -0.1405 S13: 0.0502 REMARK 3 S21: 0.0498 S22: -0.0273 S23: -0.2219 REMARK 3 S31: 0.0969 S32: 0.0092 S33: 0.0048 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN 'D' AND RESID 128 THROUGH 207) REMARK 3 ORIGIN FOR THE GROUP (A): 13.2211 -21.1722 7.8053 REMARK 3 T TENSOR REMARK 3 T11: 0.1107 T22: 0.1172 REMARK 3 T33: 0.1159 T12: 0.0151 REMARK 3 T13: 0.0294 T23: -0.0128 REMARK 3 L TENSOR REMARK 3 L11: 3.0439 L22: 3.6393 REMARK 3 L33: 2.4827 L12: 0.1199 REMARK 3 L13: 0.2975 L23: 0.0830 REMARK 3 S TENSOR REMARK 3 S11: -0.0539 S12: -0.0035 S13: -0.1757 REMARK 3 S21: 0.0041 S22: -0.0051 S23: 0.0529 REMARK 3 S31: 0.1778 S32: 0.0337 S33: 0.0426 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN 'E' AND RESID 128 THROUGH 207) REMARK 3 ORIGIN FOR THE GROUP (A): 36.1593 -5.4963 4.3223 REMARK 3 T TENSOR REMARK 3 T11: 0.0961 T22: 0.1051 REMARK 3 T33: 0.1022 T12: 0.0102 REMARK 3 T13: -0.0007 T23: 0.0011 REMARK 3 L TENSOR REMARK 3 L11: 2.3562 L22: 3.4999 REMARK 3 L33: 2.8306 L12: 0.5328 REMARK 3 L13: 0.3129 L23: 0.5533 REMARK 3 S TENSOR REMARK 3 S11: 0.0185 S12: -0.0001 S13: -0.0878 REMARK 3 S21: 0.0292 S22: -0.0469 S23: -0.0042 REMARK 3 S31: 0.1129 S32: -0.0156 S33: 0.0203 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN 'F' AND RESID 128 THROUGH 207) REMARK 3 ORIGIN FOR THE GROUP (A): 23.8424 4.8669 0.7551 REMARK 3 T TENSOR REMARK 3 T11: 0.0906 T22: 0.1132 REMARK 3 T33: 0.1247 T12: 0.0181 REMARK 3 T13: -0.0081 T23: 0.0179 REMARK 3 L TENSOR REMARK 3 L11: 3.9368 L22: 3.4282 REMARK 3 L33: 2.7364 L12: 0.9085 REMARK 3 L13: -0.3777 L23: -0.8449 REMARK 3 S TENSOR REMARK 3 S11: -0.0135 S12: -0.0081 S13: 0.1341 REMARK 3 S21: -0.0421 S22: -0.0281 S23: 0.0679 REMARK 3 S31: -0.0597 S32: 0.0367 S33: 0.0115 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8ERH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-OCT-22. REMARK 100 THE DEPOSITION ID IS D_1000268588. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 S 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 88526 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.470 REMARK 200 RESOLUTION RANGE LOW (A) : 49.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 13.30 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.47 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.1 REMARK 200 DATA REDUNDANCY IN SHELL : 12.10 REMARK 200 R MERGE FOR SHELL (I) : 1.33200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: ALPHAFOLD2 PREDICTION REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5 M (NH4)2SO4, 0.1 M NA2HPO4, PH REMARK 280 4.2, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.49100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.01000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.06050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.01000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.49100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.06050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 212 REMARK 465 VAL A 213 REMARK 465 LEU A 214 REMARK 465 LYS B 210 REMARK 465 THR B 211 REMARK 465 LYS B 212 REMARK 465 VAL B 213 REMARK 465 LEU B 214 REMARK 465 LYS C 210 REMARK 465 THR C 211 REMARK 465 LYS C 212 REMARK 465 VAL C 213 REMARK 465 LEU C 214 REMARK 465 LYS D 208 REMARK 465 ASP D 209 REMARK 465 LYS D 210 REMARK 465 THR D 211 REMARK 465 LYS D 212 REMARK 465 VAL D 213 REMARK 465 LEU D 214 REMARK 465 LYS E 208 REMARK 465 ASP E 209 REMARK 465 LYS E 210 REMARK 465 THR E 211 REMARK 465 LYS E 212 REMARK 465 VAL E 213 REMARK 465 LEU E 214 REMARK 465 LYS F 208 REMARK 465 ASP F 209 REMARK 465 LYS F 210 REMARK 465 THR F 211 REMARK 465 LYS F 212 REMARK 465 VAL F 213 REMARK 465 LEU F 214 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 210 CG CD CE NZ REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH D 391 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH D 392 DISTANCE = 6.02 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8ERE RELATED DB: PDB REMARK 900 8ERE IS THE TRICLINIC CRYSTAL FORM OF HTLV-1 CAPSID PROTEIN N- REMARK 900 TERMINAL DOMAIN. REMARK 900 RELATED ID: 8ERF RELATED DB: PDB REMARK 900 8ERF IS THE ORTHORHOMBIC CRYSTAL FORM OF HTLV-1 CAPSID PROTEIN N- REMARK 900 TERMINAL DOMAIN. REMARK 900 RELATED ID: 8ERG RELATED DB: PDB REMARK 900 8ERG IS THE HEXAGONAL CRYSTAL FORM OF HTLV-1 CAPSID PROTEIN N- REMARK 900 TERMINAL DOMAIN. REMARK 900 RELATED ID: 8ERI RELATED DB: PDB REMARK 900 8ERI IS THE FULL-LENGTH STRUCTURE OF HTLV-1 CAPSID PROTEIN. DBREF 8ERH A 128 214 UNP U3RC60 U3RC60_9DELA 258 344 DBREF 8ERH B 128 214 UNP U3RC60 U3RC60_9DELA 258 344 DBREF 8ERH C 128 214 UNP U3RC60 U3RC60_9DELA 258 344 DBREF 8ERH D 128 214 UNP U3RC60 U3RC60_9DELA 258 344 DBREF 8ERH E 128 214 UNP U3RC60 U3RC60_9DELA 258 344 DBREF 8ERH F 128 214 UNP U3RC60 U3RC60_9DELA 258 344 SEQRES 1 A 87 ALA LYS ASP PRO SER TRP ALA SER ILE LEU GLN GLY LEU SEQRES 2 A 87 GLU GLU PRO TYR HIS THR PHE VAL GLU ARG LEU ASN VAL SEQRES 3 A 87 ALA LEU ASP ASN GLY LEU PRO GLU GLY THR PRO LYS ASP SEQRES 4 A 87 PRO ILE LEU ARG SER LEU ALA TYR SER ASN ALA ASN LYS SEQRES 5 A 87 GLU CYS GLN LYS LEU LEU GLN ALA ARG GLY HIS THR ASN SEQRES 6 A 87 SER PRO LEU GLY ASP MET LEU ARG ALA CYS GLN ALA TRP SEQRES 7 A 87 THR PRO LYS ASP LYS THR LYS VAL LEU SEQRES 1 B 87 ALA LYS ASP PRO SER TRP ALA SER ILE LEU GLN GLY LEU SEQRES 2 B 87 GLU GLU PRO TYR HIS THR PHE VAL GLU ARG LEU ASN VAL SEQRES 3 B 87 ALA LEU ASP ASN GLY LEU PRO GLU GLY THR PRO LYS ASP SEQRES 4 B 87 PRO ILE LEU ARG SER LEU ALA TYR SER ASN ALA ASN LYS SEQRES 5 B 87 GLU CYS GLN LYS LEU LEU GLN ALA ARG GLY HIS THR ASN SEQRES 6 B 87 SER PRO LEU GLY ASP MET LEU ARG ALA CYS GLN ALA TRP SEQRES 7 B 87 THR PRO LYS ASP LYS THR LYS VAL LEU SEQRES 1 C 87 ALA LYS ASP PRO SER TRP ALA SER ILE LEU GLN GLY LEU SEQRES 2 C 87 GLU GLU PRO TYR HIS THR PHE VAL GLU ARG LEU ASN VAL SEQRES 3 C 87 ALA LEU ASP ASN GLY LEU PRO GLU GLY THR PRO LYS ASP SEQRES 4 C 87 PRO ILE LEU ARG SER LEU ALA TYR SER ASN ALA ASN LYS SEQRES 5 C 87 GLU CYS GLN LYS LEU LEU GLN ALA ARG GLY HIS THR ASN SEQRES 6 C 87 SER PRO LEU GLY ASP MET LEU ARG ALA CYS GLN ALA TRP SEQRES 7 C 87 THR PRO LYS ASP LYS THR LYS VAL LEU SEQRES 1 D 87 ALA LYS ASP PRO SER TRP ALA SER ILE LEU GLN GLY LEU SEQRES 2 D 87 GLU GLU PRO TYR HIS THR PHE VAL GLU ARG LEU ASN VAL SEQRES 3 D 87 ALA LEU ASP ASN GLY LEU PRO GLU GLY THR PRO LYS ASP SEQRES 4 D 87 PRO ILE LEU ARG SER LEU ALA TYR SER ASN ALA ASN LYS SEQRES 5 D 87 GLU CYS GLN LYS LEU LEU GLN ALA ARG GLY HIS THR ASN SEQRES 6 D 87 SER PRO LEU GLY ASP MET LEU ARG ALA CYS GLN ALA TRP SEQRES 7 D 87 THR PRO LYS ASP LYS THR LYS VAL LEU SEQRES 1 E 87 ALA LYS ASP PRO SER TRP ALA SER ILE LEU GLN GLY LEU SEQRES 2 E 87 GLU GLU PRO TYR HIS THR PHE VAL GLU ARG LEU ASN VAL SEQRES 3 E 87 ALA LEU ASP ASN GLY LEU PRO GLU GLY THR PRO LYS ASP SEQRES 4 E 87 PRO ILE LEU ARG SER LEU ALA TYR SER ASN ALA ASN LYS SEQRES 5 E 87 GLU CYS GLN LYS LEU LEU GLN ALA ARG GLY HIS THR ASN SEQRES 6 E 87 SER PRO LEU GLY ASP MET LEU ARG ALA CYS GLN ALA TRP SEQRES 7 E 87 THR PRO LYS ASP LYS THR LYS VAL LEU SEQRES 1 F 87 ALA LYS ASP PRO SER TRP ALA SER ILE LEU GLN GLY LEU SEQRES 2 F 87 GLU GLU PRO TYR HIS THR PHE VAL GLU ARG LEU ASN VAL SEQRES 3 F 87 ALA LEU ASP ASN GLY LEU PRO GLU GLY THR PRO LYS ASP SEQRES 4 F 87 PRO ILE LEU ARG SER LEU ALA TYR SER ASN ALA ASN LYS SEQRES 5 F 87 GLU CYS GLN LYS LEU LEU GLN ALA ARG GLY HIS THR ASN SEQRES 6 F 87 SER PRO LEU GLY ASP MET LEU ARG ALA CYS GLN ALA TRP SEQRES 7 F 87 THR PRO LYS ASP LYS THR LYS VAL LEU HET PO4 A 301 5 HET PO4 B 301 5 HET PO4 B 302 5 HET PO4 C 301 5 HET PO4 C 302 5 HET PO4 E 301 5 HET PO4 F 301 5 HETNAM PO4 PHOSPHATE ION FORMUL 7 PO4 7(O4 P 3-) FORMUL 14 HOH *524(H2 O) HELIX 1 AA1 PRO A 131 ILE A 136 5 6 HELIX 2 AA2 PRO A 143 LEU A 159 1 17 HELIX 3 AA3 PRO A 164 ASN A 176 1 13 HELIX 4 AA4 ASN A 178 ALA A 187 1 10 HELIX 5 AA5 SER A 193 CYS A 202 1 10 HELIX 6 AA6 PRO B 131 ILE B 136 5 6 HELIX 7 AA7 PRO B 143 LEU B 159 1 17 HELIX 8 AA8 PRO B 164 ASN B 176 1 13 HELIX 9 AA9 ASN B 178 ALA B 187 1 10 HELIX 10 AB1 SER B 193 CYS B 202 1 10 HELIX 11 AB2 PRO C 131 ILE C 136 1 6 HELIX 12 AB3 PRO C 143 LEU C 159 1 17 HELIX 13 AB4 PRO C 164 ASN C 176 1 13 HELIX 14 AB5 ASN C 178 ALA C 187 1 10 HELIX 15 AB6 SER C 193 CYS C 202 1 10 HELIX 16 AB7 PRO D 131 SER D 135 5 5 HELIX 17 AB8 PRO D 143 LEU D 159 1 17 HELIX 18 AB9 PRO D 164 ASN D 176 1 13 HELIX 19 AC1 ASN D 178 ALA D 187 1 10 HELIX 20 AC2 SER D 193 CYS D 202 1 10 HELIX 21 AC3 PRO E 131 ILE E 136 5 6 HELIX 22 AC4 PRO E 143 LEU E 159 1 17 HELIX 23 AC5 PRO E 164 ASN E 176 1 13 HELIX 24 AC6 ASN E 178 ALA E 187 1 10 HELIX 25 AC7 SER E 193 GLN E 203 1 11 HELIX 26 AC8 PRO F 131 ILE F 136 1 6 HELIX 27 AC9 PRO F 143 LEU F 159 1 17 HELIX 28 AD1 PRO F 164 ASN F 176 1 13 HELIX 29 AD2 ASN F 178 ALA F 187 1 10 HELIX 30 AD3 SER F 193 CYS F 202 1 10 HELIX 31 AD4 GLN F 203 TRP F 205 5 3 CRYST1 56.982 94.121 96.020 90.00 90.00 90.00 P 21 21 21 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017549 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010625 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010414 0.00000 CONECT 7674 7675 7676 7677 7678 CONECT 7675 7674 CONECT 7676 7674 CONECT 7677 7674 CONECT 7678 7674 CONECT 7679 7680 7681 7682 7683 CONECT 7680 7679 CONECT 7681 7679 CONECT 7682 7679 CONECT 7683 7679 CONECT 7684 7685 7686 7687 7688 CONECT 7685 7684 CONECT 7686 7684 CONECT 7687 7684 CONECT 7688 7684 CONECT 7689 7690 7691 7692 7693 CONECT 7690 7689 CONECT 7691 7689 CONECT 7692 7689 CONECT 7693 7689 CONECT 7694 7695 7696 7697 7698 CONECT 7695 7694 CONECT 7696 7694 CONECT 7697 7694 CONECT 7698 7694 CONECT 7699 7700 7701 7702 7703 CONECT 7700 7699 CONECT 7701 7699 CONECT 7702 7699 CONECT 7703 7699 CONECT 7704 7705 7706 7707 7708 CONECT 7705 7704 CONECT 7706 7704 CONECT 7707 7704 CONECT 7708 7704 MASTER 410 0 7 31 0 0 0 6 4348 6 35 42 END