HEADER TRANSFERASE 26-OCT-22 8EXZ TITLE STRUCTURE OF GDAP1 CONTAINING CMT MUTANT T157P COMPND MOL_ID: 1; COMPND 2 MOLECULE: GANGLIOSIDE-INDUCED DIFFERENTIATION-ASSOCIATED PROTEIN 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GDAP1; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: GDAP1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MITOCHONDRIA, MEMBRANE, GLUTATHIONE S-TRANSFERASE, OXIDATIVE STRESS, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.R.GOOGINS,A.P.VANDEMARK REVDAT 1 08-NOV-23 8EXZ 0 JRNL AUTH M.R.GOOGINS,A.P.VANDEMARK JRNL TITL STRUCTURE OF GDAP1 CONTAINING CMT MUTANT T157P JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.82 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.82 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 55.86 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 12490 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.257 REMARK 3 R VALUE (WORKING SET) : 0.255 REMARK 3 FREE R VALUE : 0.279 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.880 REMARK 3 FREE R VALUE TEST SET COUNT : 984 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 55.8600 - 5.3900 0.98 1729 151 0.2437 0.2692 REMARK 3 2 5.3900 - 4.2800 0.99 1667 142 0.2160 0.2342 REMARK 3 3 4.2800 - 3.7400 0.99 1646 139 0.2258 0.2619 REMARK 3 4 3.7400 - 3.4000 0.99 1653 136 0.2518 0.2511 REMARK 3 5 3.4000 - 3.1500 0.97 1588 141 0.2904 0.3416 REMARK 3 6 3.1500 - 2.9700 0.98 1608 136 0.3318 0.4012 REMARK 3 7 2.9700 - 2.8200 0.98 1615 139 0.3649 0.3518 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.030 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 62.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8EXZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-OCT-22. REMARK 100 THE DEPOSITION ID IS D_1000269588. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-APR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12544 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.820 REMARK 200 RESOLUTION RANGE LOW (A) : 58.540 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.12600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.82 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.87 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : 0.70800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6IUH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM SULFATE, 0.1M BIS-TRIS, REMARK 280 25% W/V PEG 3350, PH 5.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.79300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.90500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.03200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 42.90500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.79300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.03200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ARG A 3 REMARK 465 ARG A 4 REMARK 465 GLN A 5 REMARK 465 ASP A 6 REMARK 465 GLU A 7 REMARK 465 ALA A 8 REMARK 465 ARG A 9 REMARK 465 ALA A 10 REMARK 465 GLY A 11 REMARK 465 VAL A 12 REMARK 465 PRO A 13 REMARK 465 LEU A 14 REMARK 465 ARG A 15 REMARK 465 VAL A 16 REMARK 465 GLU A 17 REMARK 465 GLY A 18 REMARK 465 PRO A 19 REMARK 465 PRO A 20 REMARK 465 ASP A 21 REMARK 465 LYS A 22 REMARK 465 GLU A 23 REMARK 465 VAL A 24 REMARK 465 LEU A 60 REMARK 465 SER A 61 REMARK 465 GLU A 62 REMARK 465 HIS A 63 REMARK 465 ALA A 154 REMARK 465 TYR A 155 REMARK 465 ALA A 156 REMARK 465 PRO A 157 REMARK 465 THR A 158 REMARK 465 ARG A 159 REMARK 465 ILE A 160 REMARK 465 ARG A 161 REMARK 465 SER A 162 REMARK 465 GLN A 163 REMARK 465 ILE A 164 REMARK 465 GLY A 165 REMARK 465 ASN A 166 REMARK 465 THR A 167 REMARK 465 GLU A 168 REMARK 465 SER A 169 REMARK 465 GLU A 170 REMARK 465 LEU A 171 REMARK 465 LYS A 172 REMARK 465 LYS A 173 REMARK 465 LEU A 174 REMARK 465 ALA A 175 REMARK 465 GLU A 176 REMARK 465 GLU A 177 REMARK 465 ASN A 178 REMARK 465 PRO A 179 REMARK 465 ASP A 180 REMARK 465 LEU A 181 REMARK 465 GLN A 182 REMARK 465 GLU A 183 REMARK 465 ALA A 184 REMARK 465 TYR A 185 REMARK 465 ILE A 186 REMARK 465 ALA A 187 REMARK 465 LYS A 188 REMARK 465 GLN A 189 REMARK 465 LYS A 190 REMARK 465 ARG A 191 REMARK 465 LEU A 192 REMARK 465 LYS A 193 REMARK 465 SER A 194 REMARK 465 LYS A 195 REMARK 465 LEU A 196 REMARK 465 LEU A 197 REMARK 465 GLY A 294 REMARK 465 HIS A 295 REMARK 465 VAL A 296 REMARK 465 ASN A 297 REMARK 465 ASN A 298 REMARK 465 ILE A 299 REMARK 465 LEU A 300 REMARK 465 ILE A 301 REMARK 465 SER A 302 REMARK 465 ALA A 303 REMARK 465 VAL A 304 REMARK 465 LEU A 305 REMARK 465 PRO A 306 REMARK 465 THR A 307 REMARK 465 ALA A 308 REMARK 465 PHE A 309 REMARK 465 ARG A 310 REMARK 465 VAL A 311 REMARK 465 ALA A 312 REMARK 465 LYS A 313 REMARK 465 LYS A 314 REMARK 465 ARG A 315 REMARK 465 ALA A 316 REMARK 465 PRO A 317 REMARK 465 LYS A 318 REMARK 465 VAL A 319 REMARK 465 LEU A 320 REMARK 465 GLY A 321 REMARK 465 SER A 322 REMARK 465 THR A 323 REMARK 465 LEU A 324 REMARK 465 VAL A 325 REMARK 465 VAL A 326 REMARK 465 GLY A 327 REMARK 465 LEU A 328 REMARK 465 LEU A 329 REMARK 465 VAL A 330 REMARK 465 GLY A 331 REMARK 465 MET A 332 REMARK 465 GLY A 333 REMARK 465 TYR A 334 REMARK 465 PHE A 335 REMARK 465 ALA A 336 REMARK 465 PHE A 337 REMARK 465 MET A 338 REMARK 465 LEU A 339 REMARK 465 PHE A 340 REMARK 465 ARG A 341 REMARK 465 ARG A 342 REMARK 465 ARG A 343 REMARK 465 LEU A 344 REMARK 465 GLY A 345 REMARK 465 SER A 346 REMARK 465 MET A 347 REMARK 465 ILE A 348 REMARK 465 LEU A 349 REMARK 465 ALA A 350 REMARK 465 LEU A 351 REMARK 465 ARG A 352 REMARK 465 PRO A 353 REMARK 465 ARG A 354 REMARK 465 PRO A 355 REMARK 465 ASN A 356 REMARK 465 TYR A 357 REMARK 465 PHE A 358 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 ARG B 3 REMARK 465 ARG B 4 REMARK 465 GLN B 5 REMARK 465 ASP B 6 REMARK 465 GLU B 7 REMARK 465 ALA B 8 REMARK 465 ARG B 9 REMARK 465 ALA B 10 REMARK 465 GLY B 11 REMARK 465 VAL B 12 REMARK 465 PRO B 13 REMARK 465 LEU B 14 REMARK 465 ARG B 15 REMARK 465 VAL B 16 REMARK 465 GLU B 17 REMARK 465 GLY B 18 REMARK 465 PRO B 19 REMARK 465 PRO B 20 REMARK 465 ASP B 21 REMARK 465 LYS B 22 REMARK 465 GLU B 23 REMARK 465 VAL B 24 REMARK 465 TYR B 155 REMARK 465 ALA B 156 REMARK 465 PRO B 157 REMARK 465 THR B 158 REMARK 465 ARG B 159 REMARK 465 ILE B 160 REMARK 465 ARG B 161 REMARK 465 SER B 162 REMARK 465 GLN B 163 REMARK 465 ILE B 164 REMARK 465 GLY B 165 REMARK 465 ASN B 166 REMARK 465 THR B 167 REMARK 465 GLU B 168 REMARK 465 SER B 169 REMARK 465 GLU B 170 REMARK 465 LEU B 171 REMARK 465 LYS B 172 REMARK 465 LYS B 173 REMARK 465 LEU B 174 REMARK 465 ALA B 175 REMARK 465 GLU B 176 REMARK 465 GLU B 177 REMARK 465 ASN B 178 REMARK 465 PRO B 179 REMARK 465 ASP B 180 REMARK 465 LEU B 181 REMARK 465 GLN B 182 REMARK 465 GLU B 183 REMARK 465 ALA B 184 REMARK 465 TYR B 185 REMARK 465 ILE B 186 REMARK 465 ALA B 187 REMARK 465 LYS B 188 REMARK 465 GLN B 189 REMARK 465 LYS B 190 REMARK 465 ARG B 191 REMARK 465 LEU B 192 REMARK 465 LYS B 193 REMARK 465 SER B 194 REMARK 465 LYS B 195 REMARK 465 LEU B 196 REMARK 465 LEU B 197 REMARK 465 ASP B 198 REMARK 465 GLU B 232 REMARK 465 GLU B 233 REMARK 465 GLY B 234 REMARK 465 ILE B 299 REMARK 465 LEU B 300 REMARK 465 ILE B 301 REMARK 465 SER B 302 REMARK 465 ALA B 303 REMARK 465 VAL B 304 REMARK 465 LEU B 305 REMARK 465 PRO B 306 REMARK 465 THR B 307 REMARK 465 ALA B 308 REMARK 465 PHE B 309 REMARK 465 ARG B 310 REMARK 465 VAL B 311 REMARK 465 ALA B 312 REMARK 465 LYS B 313 REMARK 465 LYS B 314 REMARK 465 ARG B 315 REMARK 465 ALA B 316 REMARK 465 PRO B 317 REMARK 465 LYS B 318 REMARK 465 VAL B 319 REMARK 465 LEU B 320 REMARK 465 GLY B 321 REMARK 465 SER B 322 REMARK 465 THR B 323 REMARK 465 LEU B 324 REMARK 465 VAL B 325 REMARK 465 VAL B 326 REMARK 465 GLY B 327 REMARK 465 LEU B 328 REMARK 465 LEU B 329 REMARK 465 VAL B 330 REMARK 465 GLY B 331 REMARK 465 MET B 332 REMARK 465 GLY B 333 REMARK 465 TYR B 334 REMARK 465 PHE B 335 REMARK 465 ALA B 336 REMARK 465 PHE B 337 REMARK 465 MET B 338 REMARK 465 LEU B 339 REMARK 465 PHE B 340 REMARK 465 ARG B 341 REMARK 465 ARG B 342 REMARK 465 ARG B 343 REMARK 465 LEU B 344 REMARK 465 GLY B 345 REMARK 465 SER B 346 REMARK 465 MET B 347 REMARK 465 ILE B 348 REMARK 465 LEU B 349 REMARK 465 ALA B 350 REMARK 465 LEU B 351 REMARK 465 ARG B 352 REMARK 465 PRO B 353 REMARK 465 ARG B 354 REMARK 465 PRO B 355 REMARK 465 ASN B 356 REMARK 465 TYR B 357 REMARK 465 PHE B 358 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN B 298 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 66 171.57 -51.19 REMARK 500 ASN A 72 83.63 -154.08 REMARK 500 GLU A 89 140.54 74.38 REMARK 500 GLU B 89 139.94 77.37 REMARK 500 REMARK 500 REMARK: NULL DBREF 8EXZ A 1 358 UNP O88741 GDAP1_MOUSE 1 358 DBREF 8EXZ B 1 358 UNP O88741 GDAP1_MOUSE 1 358 SEQADV 8EXZ PRO A 157 UNP O88741 THR 157 ENGINEERED MUTATION SEQADV 8EXZ PRO B 157 UNP O88741 THR 157 ENGINEERED MUTATION SEQRES 1 A 358 MET ALA ARG ARG GLN ASP GLU ALA ARG ALA GLY VAL PRO SEQRES 2 A 358 LEU ARG VAL GLU GLY PRO PRO ASP LYS GLU VAL HIS LEU SEQRES 3 A 358 ILE LEU TYR HIS TRP THR HIS SER PHE SER SER GLN LYS SEQRES 4 A 358 VAL ARG LEU VAL ILE ALA GLU LYS ALA LEU LYS CYS GLU SEQRES 5 A 358 GLU HIS ASP VAL SER LEU PRO LEU SER GLU HIS ASN GLU SEQRES 6 A 358 PRO TRP PHE MET ARG LEU ASN SER ALA GLY GLU VAL PRO SEQRES 7 A 358 VAL LEU VAL HIS GLY GLU ASN ILE ILE CYS GLU ALA THR SEQRES 8 A 358 GLN ILE ILE ASP TYR LEU GLU GLN THR PHE LEU ASP GLU SEQRES 9 A 358 ARG THR PRO ARG LEU MET PRO ASP GLU GLY SER MET TYR SEQRES 10 A 358 TYR PRO ARG VAL GLN HIS TYR ARG GLU LEU LEU ASP SER SEQRES 11 A 358 LEU PRO MET ASP ALA TYR THR HIS GLY CYS ILE LEU HIS SEQRES 12 A 358 PRO GLU LEU THR VAL ASP SER MET ILE PRO ALA TYR ALA SEQRES 13 A 358 PRO THR ARG ILE ARG SER GLN ILE GLY ASN THR GLU SER SEQRES 14 A 358 GLU LEU LYS LYS LEU ALA GLU GLU ASN PRO ASP LEU GLN SEQRES 15 A 358 GLU ALA TYR ILE ALA LYS GLN LYS ARG LEU LYS SER LYS SEQRES 16 A 358 LEU LEU ASP HIS ASP ASN VAL LYS TYR LEU LYS LYS ILE SEQRES 17 A 358 LEU ASP GLU LEU GLU LYS VAL LEU ASP GLN VAL GLU THR SEQRES 18 A 358 GLU LEU GLN ARG ARG ASN GLU GLU THR PRO GLU GLU GLY SEQRES 19 A 358 ASN GLN PRO TRP LEU CYS GLY GLU SER PHE THR LEU ALA SEQRES 20 A 358 ASP VAL SER LEU ALA VAL THR LEU HIS ARG LEU LYS PHE SEQRES 21 A 358 LEU GLY PHE ALA ARG ARG ASN TRP GLY HIS GLY LYS ARG SEQRES 22 A 358 PRO ASN LEU GLU THR TYR TYR GLU ARG VAL LEU LYS ARG SEQRES 23 A 358 LYS THR PHE ASN LYS VAL LEU GLY HIS VAL ASN ASN ILE SEQRES 24 A 358 LEU ILE SER ALA VAL LEU PRO THR ALA PHE ARG VAL ALA SEQRES 25 A 358 LYS LYS ARG ALA PRO LYS VAL LEU GLY SER THR LEU VAL SEQRES 26 A 358 VAL GLY LEU LEU VAL GLY MET GLY TYR PHE ALA PHE MET SEQRES 27 A 358 LEU PHE ARG ARG ARG LEU GLY SER MET ILE LEU ALA LEU SEQRES 28 A 358 ARG PRO ARG PRO ASN TYR PHE SEQRES 1 B 358 MET ALA ARG ARG GLN ASP GLU ALA ARG ALA GLY VAL PRO SEQRES 2 B 358 LEU ARG VAL GLU GLY PRO PRO ASP LYS GLU VAL HIS LEU SEQRES 3 B 358 ILE LEU TYR HIS TRP THR HIS SER PHE SER SER GLN LYS SEQRES 4 B 358 VAL ARG LEU VAL ILE ALA GLU LYS ALA LEU LYS CYS GLU SEQRES 5 B 358 GLU HIS ASP VAL SER LEU PRO LEU SER GLU HIS ASN GLU SEQRES 6 B 358 PRO TRP PHE MET ARG LEU ASN SER ALA GLY GLU VAL PRO SEQRES 7 B 358 VAL LEU VAL HIS GLY GLU ASN ILE ILE CYS GLU ALA THR SEQRES 8 B 358 GLN ILE ILE ASP TYR LEU GLU GLN THR PHE LEU ASP GLU SEQRES 9 B 358 ARG THR PRO ARG LEU MET PRO ASP GLU GLY SER MET TYR SEQRES 10 B 358 TYR PRO ARG VAL GLN HIS TYR ARG GLU LEU LEU ASP SER SEQRES 11 B 358 LEU PRO MET ASP ALA TYR THR HIS GLY CYS ILE LEU HIS SEQRES 12 B 358 PRO GLU LEU THR VAL ASP SER MET ILE PRO ALA TYR ALA SEQRES 13 B 358 PRO THR ARG ILE ARG SER GLN ILE GLY ASN THR GLU SER SEQRES 14 B 358 GLU LEU LYS LYS LEU ALA GLU GLU ASN PRO ASP LEU GLN SEQRES 15 B 358 GLU ALA TYR ILE ALA LYS GLN LYS ARG LEU LYS SER LYS SEQRES 16 B 358 LEU LEU ASP HIS ASP ASN VAL LYS TYR LEU LYS LYS ILE SEQRES 17 B 358 LEU ASP GLU LEU GLU LYS VAL LEU ASP GLN VAL GLU THR SEQRES 18 B 358 GLU LEU GLN ARG ARG ASN GLU GLU THR PRO GLU GLU GLY SEQRES 19 B 358 ASN GLN PRO TRP LEU CYS GLY GLU SER PHE THR LEU ALA SEQRES 20 B 358 ASP VAL SER LEU ALA VAL THR LEU HIS ARG LEU LYS PHE SEQRES 21 B 358 LEU GLY PHE ALA ARG ARG ASN TRP GLY HIS GLY LYS ARG SEQRES 22 B 358 PRO ASN LEU GLU THR TYR TYR GLU ARG VAL LEU LYS ARG SEQRES 23 B 358 LYS THR PHE ASN LYS VAL LEU GLY HIS VAL ASN ASN ILE SEQRES 24 B 358 LEU ILE SER ALA VAL LEU PRO THR ALA PHE ARG VAL ALA SEQRES 25 B 358 LYS LYS ARG ALA PRO LYS VAL LEU GLY SER THR LEU VAL SEQRES 26 B 358 VAL GLY LEU LEU VAL GLY MET GLY TYR PHE ALA PHE MET SEQRES 27 B 358 LEU PHE ARG ARG ARG LEU GLY SER MET ILE LEU ALA LEU SEQRES 28 B 358 ARG PRO ARG PRO ASN TYR PHE HELIX 1 AA1 SER A 34 LYS A 47 1 14 HELIX 2 AA2 GLU A 89 PHE A 101 1 13 HELIX 3 AA3 MET A 116 SER A 130 1 15 HELIX 4 AA4 PRO A 132 HIS A 143 1 12 HELIX 5 AA5 PRO A 144 THR A 147 5 4 HELIX 6 AA6 ASN A 201 THR A 230 1 30 HELIX 7 AA7 THR A 245 GLY A 262 1 18 HELIX 8 AA8 PHE A 263 TRP A 268 1 6 HELIX 9 AA9 ARG A 273 LYS A 285 1 13 HELIX 10 AB1 ARG A 286 LEU A 293 1 8 HELIX 11 AB2 SER B 34 LYS B 47 1 14 HELIX 12 AB3 PRO B 59 HIS B 63 5 5 HELIX 13 AB4 PRO B 66 LEU B 71 1 6 HELIX 14 AB5 GLU B 89 PHE B 101 1 13 HELIX 15 AB6 TYR B 117 LEU B 131 1 15 HELIX 16 AB7 PRO B 132 HIS B 143 1 12 HELIX 17 AB8 PRO B 144 THR B 147 5 4 HELIX 18 AB9 ASN B 201 THR B 230 1 30 HELIX 19 AC1 THR B 245 GLY B 262 1 18 HELIX 20 AC2 PHE B 263 TRP B 268 1 6 HELIX 21 AC3 ARG B 273 ARG B 286 1 14 HELIX 22 AC4 ARG B 286 LEU B 293 1 8 SHEET 1 AA1 4 CYS A 51 ASP A 55 0 SHEET 2 AA1 4 LEU A 26 HIS A 30 1 N LEU A 28 O GLU A 52 SHEET 3 AA1 4 VAL A 79 HIS A 82 -1 O VAL A 81 N ILE A 27 SHEET 4 AA1 4 ASN A 85 CYS A 88 -1 O ILE A 87 N LEU A 80 SHEET 1 AA2 4 CYS B 51 ASP B 55 0 SHEET 2 AA2 4 LEU B 26 HIS B 30 1 N LEU B 28 O HIS B 54 SHEET 3 AA2 4 VAL B 79 HIS B 82 -1 O VAL B 81 N ILE B 27 SHEET 4 AA2 4 ASN B 85 CYS B 88 -1 O ILE B 87 N LEU B 80 SSBOND 1 CYS A 88 CYS B 88 1555 1555 2.05 CRYST1 73.586 80.064 85.810 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013590 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012490 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011654 0.00000