HEADER RNA BINDING PROTEIN/RNA 26-OCT-22 8EY6 TITLE LAM DOMAIN OF HUMAN LARP1 IN COMPLEX WITH AAAAAG RNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOFORM 2 OF LA-RELATED PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 323-410; COMPND 5 SYNONYM: LA RIBONUCLEOPROTEIN DOMAIN FAMILY MEMBER 1; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: RNA (5'-R(*AP*AP*AP*AP*AP*G)-3'); COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: LARP1, KIAA0731, LARP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606 KEYWDS WINGED HELIX FOLD, RNA BINDING DOMAIN, RNA BINDING PROTEIN, RNA KEYWDS 2 BINDING PROTEIN-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR G.KOZLOV,K.GEHRING REVDAT 1 01-NOV-23 8EY6 0 JRNL AUTH G.KOZLOV,J.JIANG,K.GEHRING JRNL TITL STRUCTURAL INSIGHTS INTO POLY(A) TAIL STABILIZATION VIA JRNL TITL 2 3'-END GUANYLATION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.63 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19_4092 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.63 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.34 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 12601 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.440 REMARK 3 FREE R VALUE TEST SET COUNT : 685 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.3400 - 2.7900 0.91 2356 130 0.2004 0.2175 REMARK 3 2 2.7900 - 2.2100 0.98 2410 132 0.2219 0.2604 REMARK 3 3 2.2100 - 1.9300 0.99 2405 133 0.1959 0.2801 REMARK 3 4 1.9300 - 1.7600 1.00 2415 139 0.2160 0.2460 REMARK 3 5 1.7600 - 1.6300 0.98 2330 151 0.2653 0.3167 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.223 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.163 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.76 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 838 REMARK 3 ANGLE : 0.982 1159 REMARK 3 CHIRALITY : 0.062 134 REMARK 3 PLANARITY : 0.011 134 REMARK 3 DIHEDRAL : 9.983 144 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 322 THROUGH 337 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.1648 17.3954 32.9871 REMARK 3 T TENSOR REMARK 3 T11: 0.2307 T22: 0.3177 REMARK 3 T33: 0.2342 T12: -0.0473 REMARK 3 T13: -0.0057 T23: -0.0071 REMARK 3 L TENSOR REMARK 3 L11: 2.4101 L22: 5.3223 REMARK 3 L33: 4.9377 L12: -0.6858 REMARK 3 L13: 1.0910 L23: -2.4109 REMARK 3 S TENSOR REMARK 3 S11: 0.0997 S12: -0.0375 S13: -0.2369 REMARK 3 S21: 0.5930 S22: -0.0271 S23: 0.1911 REMARK 3 S31: -0.3706 S32: 0.1548 S33: 0.0210 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 338 THROUGH 343 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.0473 29.3930 23.5850 REMARK 3 T TENSOR REMARK 3 T11: 0.3522 T22: 0.2511 REMARK 3 T33: 0.3044 T12: -0.0575 REMARK 3 T13: -0.0758 T23: 0.0407 REMARK 3 L TENSOR REMARK 3 L11: 2.0663 L22: 1.9170 REMARK 3 L33: 1.9965 L12: 0.6560 REMARK 3 L13: -1.2880 L23: -1.4267 REMARK 3 S TENSOR REMARK 3 S11: 0.0728 S12: -0.0918 S13: 0.2771 REMARK 3 S21: 0.9669 S22: -0.4512 S23: -0.2775 REMARK 3 S31: -0.8235 S32: 0.2459 S33: 0.3288 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 344 THROUGH 366 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.4082 24.1847 17.3043 REMARK 3 T TENSOR REMARK 3 T11: 0.1941 T22: 0.2170 REMARK 3 T33: 0.2348 T12: -0.0165 REMARK 3 T13: -0.0015 T23: 0.0342 REMARK 3 L TENSOR REMARK 3 L11: 1.7522 L22: 2.8499 REMARK 3 L33: 2.2245 L12: 0.6311 REMARK 3 L13: -0.8102 L23: -0.7786 REMARK 3 S TENSOR REMARK 3 S11: 0.1366 S12: 0.1190 S13: 0.1812 REMARK 3 S21: -0.1044 S22: -0.0920 S23: 0.2776 REMARK 3 S31: -0.2051 S32: 0.0424 S33: -0.0144 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 367 THROUGH 376 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.9959 11.8567 24.6576 REMARK 3 T TENSOR REMARK 3 T11: 0.2361 T22: 0.3754 REMARK 3 T33: 0.2773 T12: 0.0082 REMARK 3 T13: -0.0043 T23: 0.0117 REMARK 3 L TENSOR REMARK 3 L11: 1.3953 L22: 2.0975 REMARK 3 L33: 1.8586 L12: 0.0120 REMARK 3 L13: -0.2717 L23: -1.8775 REMARK 3 S TENSOR REMARK 3 S11: 0.0282 S12: 0.1341 S13: -0.1418 REMARK 3 S21: -0.1265 S22: 0.0116 S23: 0.0829 REMARK 3 S31: 0.0801 S32: 0.1160 S33: 0.0003 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 377 THROUGH 385 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.6107 14.1789 30.6683 REMARK 3 T TENSOR REMARK 3 T11: 0.1844 T22: 0.2321 REMARK 3 T33: 0.2697 T12: -0.0190 REMARK 3 T13: -0.0063 T23: 0.0221 REMARK 3 L TENSOR REMARK 3 L11: 7.3384 L22: 5.2002 REMARK 3 L33: 7.3566 L12: -0.4490 REMARK 3 L13: 0.4640 L23: -0.0335 REMARK 3 S TENSOR REMARK 3 S11: 0.1565 S12: -0.3799 S13: -0.0250 REMARK 3 S21: 0.0291 S22: 0.1677 S23: 0.4162 REMARK 3 S31: 0.1610 S32: 0.2588 S33: -0.2840 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 386 THROUGH 393 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.5131 24.4609 30.3756 REMARK 3 T TENSOR REMARK 3 T11: 0.3811 T22: 0.3377 REMARK 3 T33: 0.3263 T12: -0.0316 REMARK 3 T13: 0.0848 T23: -0.0141 REMARK 3 L TENSOR REMARK 3 L11: 7.9152 L22: 3.9739 REMARK 3 L33: 5.1795 L12: 3.5940 REMARK 3 L13: 4.1819 L23: 1.9787 REMARK 3 S TENSOR REMARK 3 S11: 0.7350 S12: -1.2582 S13: 0.3815 REMARK 3 S21: 0.7443 S22: -0.3499 S23: 0.4160 REMARK 3 S31: -0.1958 S32: -0.6765 S33: -0.3231 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 394 THROUGH 399 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.7214 22.3455 23.7501 REMARK 3 T TENSOR REMARK 3 T11: 0.2271 T22: 0.2234 REMARK 3 T33: 0.3260 T12: 0.0037 REMARK 3 T13: 0.0304 T23: 0.0319 REMARK 3 L TENSOR REMARK 3 L11: 2.6596 L22: 3.9457 REMARK 3 L33: 2.5167 L12: 0.2395 REMARK 3 L13: -0.6712 L23: -0.6860 REMARK 3 S TENSOR REMARK 3 S11: 0.1286 S12: -0.2292 S13: 0.3762 REMARK 3 S21: 0.1213 S22: 0.0384 S23: 0.7330 REMARK 3 S31: -0.1365 S32: -0.3449 S33: -0.1961 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 400 THROUGH 405 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.5391 33.1468 24.9834 REMARK 3 T TENSOR REMARK 3 T11: 0.5328 T22: 0.2302 REMARK 3 T33: 0.3230 T12: 0.0379 REMARK 3 T13: 0.0801 T23: -0.0101 REMARK 3 L TENSOR REMARK 3 L11: 5.8257 L22: 6.2110 REMARK 3 L33: 1.4176 L12: -0.2141 REMARK 3 L13: -0.1658 L23: -2.7338 REMARK 3 S TENSOR REMARK 3 S11: 0.4846 S12: -0.2552 S13: 0.4581 REMARK 3 S21: 0.9954 S22: 0.2123 S23: -0.4144 REMARK 3 S31: -0.0192 S32: -0.1483 S33: -0.7262 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 406 THROUGH 410 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.0300 30.9609 13.2985 REMARK 3 T TENSOR REMARK 3 T11: 0.3368 T22: 0.1910 REMARK 3 T33: 0.2956 T12: 0.0188 REMARK 3 T13: -0.0236 T23: 0.0293 REMARK 3 L TENSOR REMARK 3 L11: 6.2773 L22: 4.3287 REMARK 3 L33: 4.9657 L12: -0.1374 REMARK 3 L13: -0.1691 L23: -1.9452 REMARK 3 S TENSOR REMARK 3 S11: 0.4314 S12: 0.1419 S13: -0.2404 REMARK 3 S21: -0.1284 S22: -0.0937 S23: 0.4644 REMARK 3 S31: 0.3393 S32: -0.1163 S33: -0.4618 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -4 THROUGH -1 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.0927 20.3112 18.1751 REMARK 3 T TENSOR REMARK 3 T11: 0.3560 T22: 0.6491 REMARK 3 T33: 0.4659 T12: -0.0207 REMARK 3 T13: 0.0366 T23: 0.1120 REMARK 3 L TENSOR REMARK 3 L11: 2.9896 L22: 3.1360 REMARK 3 L33: 2.9768 L12: -2.0408 REMARK 3 L13: 1.5594 L23: 0.1686 REMARK 3 S TENSOR REMARK 3 S11: -0.1939 S12: 0.7313 S13: -0.3129 REMARK 3 S21: -0.7550 S22: -0.3460 S23: -0.7472 REMARK 3 S31: -0.5909 S32: 1.9584 S33: 0.1632 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8EY6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-OCT-22. REMARK 100 THE DEPOSITION ID IS D_1000269594. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03321 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12601 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.630 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09100 REMARK 200 FOR THE DATA SET : 16.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.63 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.53700 REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 7SOO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 31.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS PH 6.5, 2 M AMMONIUM REMARK 280 SULFATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.26150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 29.44750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.09350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 29.44750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.26150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 23.09350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 312 REMARK 465 GLY A 313 REMARK 465 SER A 314 REMARK 465 SER A 315 REMARK 465 HIS A 316 REMARK 465 HIS A 317 REMARK 465 HIS A 318 REMARK 465 HIS A 319 REMARK 465 HIS A 320 REMARK 465 HIS A 321 REMARK 465 A B -6 REMARK 465 A B -5 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 322 OG REMARK 470 LYS A 331 CE NZ REMARK 470 ASP A 341 CG OD1 OD2 REMARK 470 ARG A 345 CD NE CZ NH1 NH2 REMARK 470 LYS A 385 CG CD CE NZ REMARK 470 ASP A 386 CG OD1 OD2 REMARK 470 LYS A 388 CG CD CE NZ REMARK 470 LYS A 396 CD CE NZ REMARK 470 GLU A 402 CG CD OE1 OE2 REMARK 470 GLU A 404 CG CD OE1 OE2 REMARK 470 LYS A 405 CD CE NZ REMARK 470 A B -4 P OP1 OP2 REMARK 470 A B -3 C8 N7 C5 C6 N6 N1 C2 REMARK 470 A B -3 N3 C4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN A 371 O HOH A 601 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 394 -116.22 53.88 REMARK 500 ASP A 394 -114.67 53.88 REMARK 500 GLU A 402 56.09 39.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7SOW RELATED DB: PDB DBREF1 8EY6 A 323 410 UNP LARP1-3_HUMAN DBREF2 8EY6 A Q6PKG0-3 323 410 DBREF 8EY6 B -6 -1 PDB 8EY6 8EY6 -6 -1 SEQADV 8EY6 MET A 312 UNP Q6PKG0-3 INITIATING METHIONINE SEQADV 8EY6 GLY A 313 UNP Q6PKG0-3 EXPRESSION TAG SEQADV 8EY6 SER A 314 UNP Q6PKG0-3 EXPRESSION TAG SEQADV 8EY6 SER A 315 UNP Q6PKG0-3 EXPRESSION TAG SEQADV 8EY6 HIS A 316 UNP Q6PKG0-3 EXPRESSION TAG SEQADV 8EY6 HIS A 317 UNP Q6PKG0-3 EXPRESSION TAG SEQADV 8EY6 HIS A 318 UNP Q6PKG0-3 EXPRESSION TAG SEQADV 8EY6 HIS A 319 UNP Q6PKG0-3 EXPRESSION TAG SEQADV 8EY6 HIS A 320 UNP Q6PKG0-3 EXPRESSION TAG SEQADV 8EY6 HIS A 321 UNP Q6PKG0-3 EXPRESSION TAG SEQADV 8EY6 SER A 322 UNP Q6PKG0-3 EXPRESSION TAG SEQRES 1 A 99 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN GLU SEQRES 2 A 99 LEU LEU LYS ASP TYR ILE LYS ARG GLN ILE GLU TYR TYR SEQRES 3 A 99 PHE SER VAL ASP ASN LEU GLU ARG ASP PHE PHE LEU ARG SEQRES 4 A 99 ARG LYS MET ASP ALA ASP GLY PHE LEU PRO ILE THR LEU SEQRES 5 A 99 ILE ALA SER PHE HIS ARG VAL GLN ALA LEU THR THR ASP SEQRES 6 A 99 ILE SER LEU ILE PHE ALA ALA LEU LYS ASP SER LYS VAL SEQRES 7 A 99 VAL GLU ILE VAL ASP GLU LYS VAL ARG ARG ARG GLU GLU SEQRES 8 A 99 PRO GLU LYS TRP PRO LEU PRO PRO SEQRES 1 B 6 A A A A A G HET SO4 A 501 5 HET SO4 A 502 5 HET SO4 B 101 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 3(O4 S 2-) FORMUL 6 HOH *33(H2 O) HELIX 1 AA1 SER A 322 PHE A 338 1 17 HELIX 2 AA2 SER A 339 GLU A 344 1 6 HELIX 3 AA3 ASP A 346 MET A 353 1 8 HELIX 4 AA4 ILE A 361 SER A 366 1 6 HELIX 5 AA5 PHE A 367 THR A 374 1 8 HELIX 6 AA6 ASP A 376 ASP A 386 1 11 HELIX 7 AA7 GLU A 402 TRP A 406 5 5 SHEET 1 AA1 3 LEU A 359 PRO A 360 0 SHEET 2 AA1 3 LYS A 396 ARG A 399 -1 O VAL A 397 N LEU A 359 SHEET 3 AA1 3 VAL A 390 VAL A 393 -1 N GLU A 391 O ARG A 398 CRYST1 36.523 46.187 58.895 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027380 0.000000 0.000000 0.00000 SCALE2 0.000000 0.021651 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016979 0.00000