HEADER IMMUNE SYSTEM 01-NOV-22 8EZL TITLE PFS25 IN COMPLEX WITH TRANSMISSION-REDUCING ANTIBODY AS01-50 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 25 KDA OOKINETE SURFACE ANTIGEN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PFS25; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: TRANSMISSION-REDUCING ANTIBODY AS01-50, SINGLE CHAIN FV; COMPND 8 CHAIN: H; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM NF54; SOURCE 3 ORGANISM_TAXID: 5833; SOURCE 4 STRAIN: ISOLATE NF54; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: EXPI293F; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PHLSEC; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM NF54; SOURCE 13 ORGANISM_TAXID: 5833; SOURCE 14 STRAIN: ISOLATE NF54; SOURCE 15 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 16 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 18 EXPRESSION_SYSTEM_CELL_LINE: EXPI293F; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PHLSEC KEYWDS PFS25, TRANSMISSION-BLOCKING VACCINE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR N.SHUKLA,W.K.TANG,N.H.TOLIA REVDAT 1 16-AUG-23 8EZL 0 JRNL AUTH N.SHUKLA,W.K.TANG,C.H.COELHO,C.A.LONG,S.A.HEALY,I.SAGARA, JRNL AUTH 2 K.MIURA,P.E.DUFFY,N.H.TOLIA JRNL TITL A HUMAN ANTIBODY EPITOPE MAP OF THE MALARIA VACCINE ANTIGEN JRNL TITL 2 PFS25. JRNL REF NPJ VACCINES V. 8 108 2023 JRNL REFN ESSN 2059-0105 JRNL PMID 37542029 JRNL DOI 10.1038/S41541-023-00712-Z REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14.3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.80 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 18025 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.220 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1802 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.8000 - 5.4100 0.99 1311 146 0.1919 0.2426 REMARK 3 2 5.4000 - 4.2900 0.99 1259 139 0.1562 0.1930 REMARK 3 3 4.2900 - 3.7500 0.97 1234 137 0.1749 0.2194 REMARK 3 4 3.7500 - 3.4100 0.99 1274 142 0.1955 0.2441 REMARK 3 5 3.4100 - 3.1600 0.99 1254 139 0.2448 0.2536 REMARK 3 6 3.1600 - 2.9800 0.98 1246 138 0.2471 0.3090 REMARK 3 7 2.9800 - 2.8300 0.99 1252 140 0.2814 0.2926 REMARK 3 8 2.8300 - 2.7000 0.98 1238 137 0.2861 0.3750 REMARK 3 9 2.7000 - 2.6000 0.98 1229 137 0.2864 0.3339 REMARK 3 10 2.6000 - 2.5100 0.99 1255 139 0.2735 0.2876 REMARK 3 11 2.5100 - 2.4300 0.99 1257 140 0.2825 0.3213 REMARK 3 12 2.4300 - 2.3600 0.99 1249 138 0.3024 0.3612 REMARK 3 13 2.3600 - 2.3000 0.94 1165 130 0.3607 0.3803 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.339 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.616 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 48.35 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 3326 REMARK 3 ANGLE : 0.515 4500 REMARK 3 CHIRALITY : 0.043 510 REMARK 3 PLANARITY : 0.003 577 REMARK 3 DIHEDRAL : 9.476 1224 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -1 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.3501 -30.7084 29.3670 REMARK 3 T TENSOR REMARK 3 T11: 0.3490 T22: 0.5376 REMARK 3 T33: 0.5151 T12: -0.0332 REMARK 3 T13: 0.0467 T23: -0.0241 REMARK 3 L TENSOR REMARK 3 L11: 7.5462 L22: 3.4328 REMARK 3 L33: 6.5631 L12: -2.8193 REMARK 3 L13: -0.3690 L23: 3.8859 REMARK 3 S TENSOR REMARK 3 S11: 0.1741 S12: -0.4245 S13: -0.1415 REMARK 3 S21: 0.2005 S22: -0.0740 S23: 0.2439 REMARK 3 S31: 0.3486 S32: -0.3546 S33: 0.2076 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.5635 -19.7703 40.4880 REMARK 3 T TENSOR REMARK 3 T11: 0.3883 T22: 0.4185 REMARK 3 T33: 0.5152 T12: 0.0046 REMARK 3 T13: 0.0232 T23: 0.0254 REMARK 3 L TENSOR REMARK 3 L11: 0.8114 L22: 1.2079 REMARK 3 L33: 7.4860 L12: -0.6244 REMARK 3 L13: 1.8096 L23: 2.2489 REMARK 3 S TENSOR REMARK 3 S11: -0.1763 S12: -0.1361 S13: 0.0523 REMARK 3 S21: -0.0168 S22: -0.0445 S23: 0.0815 REMARK 3 S31: -0.5060 S32: -0.3385 S33: 0.1848 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 73 THROUGH 88 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.1951 -23.4386 39.9572 REMARK 3 T TENSOR REMARK 3 T11: 0.5457 T22: 0.5491 REMARK 3 T33: 0.4276 T12: 0.0235 REMARK 3 T13: 0.0015 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 5.8321 L22: 4.2671 REMARK 3 L33: 7.7848 L12: -2.3377 REMARK 3 L13: 0.2402 L23: 4.9383 REMARK 3 S TENSOR REMARK 3 S11: 0.0622 S12: -0.1874 S13: -0.8701 REMARK 3 S21: 0.2418 S22: 0.1573 S23: -0.2711 REMARK 3 S31: 0.5564 S32: 0.7157 S33: -0.1837 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 89 THROUGH 163 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.3818 -28.0167 20.9418 REMARK 3 T TENSOR REMARK 3 T11: 0.3317 T22: 0.2575 REMARK 3 T33: 0.4723 T12: -0.0382 REMARK 3 T13: 0.0615 T23: -0.0331 REMARK 3 L TENSOR REMARK 3 L11: 7.4211 L22: 2.3231 REMARK 3 L33: 3.7036 L12: -1.2870 REMARK 3 L13: 2.4794 L23: -0.2487 REMARK 3 S TENSOR REMARK 3 S11: -0.1395 S12: 0.3359 S13: 0.0354 REMARK 3 S21: -0.1737 S22: 0.0250 S23: -0.1143 REMARK 3 S31: -0.1065 S32: 0.0348 S33: 0.0676 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 164 THROUGH 174 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.2156 -13.7366 12.6279 REMARK 3 T TENSOR REMARK 3 T11: 0.8620 T22: 0.7736 REMARK 3 T33: 0.7370 T12: 0.0164 REMARK 3 T13: -0.0914 T23: 0.0348 REMARK 3 L TENSOR REMARK 3 L11: 5.5383 L22: 7.0446 REMARK 3 L33: 8.8643 L12: -6.1459 REMARK 3 L13: 6.8945 L23: -7.8121 REMARK 3 S TENSOR REMARK 3 S11: -0.2075 S12: 1.2238 S13: -0.0049 REMARK 3 S21: -0.4562 S22: 0.1054 S23: -0.2654 REMARK 3 S31: -1.0004 S32: 0.0736 S33: 0.1639 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 1 THROUGH 84 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.6597 -21.6610 61.8081 REMARK 3 T TENSOR REMARK 3 T11: 0.2777 T22: 0.3446 REMARK 3 T33: 0.3184 T12: 0.0089 REMARK 3 T13: 0.0315 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 5.5446 L22: 4.3068 REMARK 3 L33: 3.0579 L12: -0.9355 REMARK 3 L13: 0.2570 L23: -0.9877 REMARK 3 S TENSOR REMARK 3 S11: 0.0693 S12: 0.2407 S13: -0.1033 REMARK 3 S21: -0.0745 S22: -0.0427 S23: -0.1038 REMARK 3 S31: 0.1306 S32: 0.1538 S33: 0.0404 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 85 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.7576 -25.8644 62.6864 REMARK 3 T TENSOR REMARK 3 T11: 0.3243 T22: 0.2786 REMARK 3 T33: 0.2971 T12: -0.0088 REMARK 3 T13: 0.0527 T23: -0.0168 REMARK 3 L TENSOR REMARK 3 L11: 6.4542 L22: 1.6767 REMARK 3 L33: 4.2607 L12: -1.2958 REMARK 3 L13: 3.3682 L23: -0.8172 REMARK 3 S TENSOR REMARK 3 S11: 0.0693 S12: -0.0476 S13: -0.2239 REMARK 3 S21: -0.1263 S22: -0.0202 S23: 0.0309 REMARK 3 S31: 0.1156 S32: -0.0258 S33: -0.0816 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 129 THROUGH 270 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.4047 -30.4882 72.6148 REMARK 3 T TENSOR REMARK 3 T11: 0.3048 T22: 0.4241 REMARK 3 T33: 0.3393 T12: 0.0273 REMARK 3 T13: 0.0193 T23: -0.0376 REMARK 3 L TENSOR REMARK 3 L11: 3.4959 L22: 2.3544 REMARK 3 L33: 2.9679 L12: 0.7365 REMARK 3 L13: 0.7549 L23: -1.4102 REMARK 3 S TENSOR REMARK 3 S11: 0.0344 S12: -0.2289 S13: -0.0584 REMARK 3 S21: -0.0137 S22: 0.0044 S23: 0.0235 REMARK 3 S31: 0.1552 S32: -0.2220 S33: -0.0867 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8EZL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-NOV-22. REMARK 100 THE DEPOSITION ID IS D_1000269364. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-DEC-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033132 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18026 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 46.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.1300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.250 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6PHB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M LITHIUM CHLORIDE, 0.1M HEPES PH REMARK 280 7.5, AND 25% PEG 6000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 44.30500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.87500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 44.30500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 27.87500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 175 REMARK 465 HIS A 176 REMARK 465 HIS A 177 REMARK 465 HIS A 178 REMARK 465 HIS A 179 REMARK 465 HIS A 180 REMARK 465 THR H -1 REMARK 465 GLY H 0 REMARK 465 GLY H 134 REMARK 465 GLY H 135 REMARK 465 GLY H 136 REMARK 465 SER H 137 REMARK 465 GLY H 138 REMARK 465 GLY H 139 REMARK 465 GLY H 140 REMARK 465 GLY H 141 REMARK 465 SER H 142 REMARK 465 GLY H 143 REMARK 465 GLY H 144 REMARK 465 GLY H 145 REMARK 465 GLY H 146 REMARK 465 SER H 147 REMARK 465 GLY H 148 REMARK 465 GLY H 149 REMARK 465 THR H 271 REMARK 465 LYS H 272 REMARK 465 HIS H 273 REMARK 465 HIS H 274 REMARK 465 HIS H 275 REMARK 465 HIS H 276 REMARK 465 HIS H 277 REMARK 465 HIS H 278 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O THR A 173 OG SER H 163 3454 1.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 26 -114.11 40.21 REMARK 500 ASN A 49 -9.09 74.29 REMARK 500 CYS A 127 59.57 -90.29 REMARK 500 THR H 15 -7.75 79.49 REMARK 500 VAL H 199 -63.65 -107.78 REMARK 500 REMARK 500 REMARK: NULL DBREF 8EZL A 1 171 UNP P13829 OS25_PLAFO 23 193 DBREF 8EZL H -1 278 PDB 8EZL 8EZL -1 278 SEQADV 8EZL THR A -1 UNP P13829 EXPRESSION TAG SEQADV 8EZL GLY A 0 UNP P13829 EXPRESSION TAG SEQADV 8EZL GLN A 90 UNP P13829 ASN 112 CONFLICT SEQADV 8EZL GLN A 143 UNP P13829 ASN 165 CONFLICT SEQADV 8EZL GLN A 165 UNP P13829 ASN 187 CONFLICT SEQADV 8EZL GLY A 172 UNP P13829 EXPRESSION TAG SEQADV 8EZL THR A 173 UNP P13829 EXPRESSION TAG SEQADV 8EZL LYS A 174 UNP P13829 EXPRESSION TAG SEQADV 8EZL HIS A 175 UNP P13829 EXPRESSION TAG SEQADV 8EZL HIS A 176 UNP P13829 EXPRESSION TAG SEQADV 8EZL HIS A 177 UNP P13829 EXPRESSION TAG SEQADV 8EZL HIS A 178 UNP P13829 EXPRESSION TAG SEQADV 8EZL HIS A 179 UNP P13829 EXPRESSION TAG SEQADV 8EZL HIS A 180 UNP P13829 EXPRESSION TAG SEQRES 1 A 182 THR GLY LYS VAL THR VAL ASP THR VAL CYS LYS ARG GLY SEQRES 2 A 182 PHE LEU ILE GLN MET SER GLY HIS LEU GLU CYS LYS CYS SEQRES 3 A 182 GLU ASN ASP LEU VAL LEU VAL ASN GLU GLU THR CYS GLU SEQRES 4 A 182 GLU LYS VAL LEU LYS CYS ASP GLU LYS THR VAL ASN LYS SEQRES 5 A 182 PRO CYS GLY ASP PHE SER LYS CYS ILE LYS ILE ASP GLY SEQRES 6 A 182 ASN PRO VAL SER TYR ALA CYS LYS CYS ASN LEU GLY TYR SEQRES 7 A 182 ASP MET VAL ASN ASN VAL CYS ILE PRO ASN GLU CYS LYS SEQRES 8 A 182 GLN VAL THR CYS GLY ASN GLY LYS CYS ILE LEU ASP THR SEQRES 9 A 182 SER ASN PRO VAL LYS THR GLY VAL CYS SER CYS ASN ILE SEQRES 10 A 182 GLY LYS VAL PRO ASN VAL GLN ASP GLN ASN LYS CYS SER SEQRES 11 A 182 LYS ASP GLY GLU THR LYS CYS SER LEU LYS CYS LEU LYS SEQRES 12 A 182 GLU GLN GLU THR CYS LYS ALA VAL ASP GLY ILE TYR LYS SEQRES 13 A 182 CYS ASP CYS LYS ASP GLY PHE ILE ILE ASP GLN GLU SER SEQRES 14 A 182 SER ILE CYS THR GLY THR LYS HIS HIS HIS HIS HIS HIS SEQRES 1 H 280 THR GLY GLN ILE THR LEU LYS GLU SER GLY PRO THR LEU SEQRES 2 H 280 VAL LYS PRO THR GLN THR LEU THR LEU THR CYS THR PHE SEQRES 3 H 280 SER GLY SER SER LEU SER THR SER GLY VAL GLY VAL GLY SEQRES 4 H 280 TRP ILE ARG GLN PRO PRO GLY LYS ALA LEU GLU TRP LEU SEQRES 5 H 280 ALA LEU ILE TYR TRP ASN ASP ASP LYS ARG TYR SER PRO SEQRES 6 H 280 SER LEU LYS ARG ARG LEU THR ILE THR LYS ASP THR SER SEQRES 7 H 280 LYS ASN GLN VAL VAL LEU THR MET THR ASN MET ASP PRO SEQRES 8 H 280 VAL ASP THR ALA THR TYR TYR CYS VAL HIS ARG GLY SER SEQRES 9 H 280 ALA PRO TYR TYR TYR ASP SER SER GLY TYR TYR SER THR SEQRES 10 H 280 PHE TYR TYR PHE ASP TYR TRP GLY GLN GLY THR LEU VAL SEQRES 11 H 280 THR VAL SER SER GLY GLY GLY GLY SER GLY GLY GLY GLY SEQRES 12 H 280 SER GLY GLY GLY GLY SER GLY GLY GLY GLY SER GLN PRO SEQRES 13 H 280 VAL LEU THR GLN PRO PRO SER ALA SER ALA SER LEU GLY SEQRES 14 H 280 ALA SER LEU SER LEU THR CYS THR LEU SER SER GLY TYR SEQRES 15 H 280 ASN ASN TYR LYS VAL ASP TRP TYR GLN GLN ARG PRO GLY SEQRES 16 H 280 LYS GLY PRO ARG PHE VAL MET ARG VAL GLY THR GLY GLY SEQRES 17 H 280 ILE VAL GLY SER LYS GLY ASP GLY ILE PRO ASP ARG PHE SEQRES 18 H 280 SER VAL LEU GLY SER GLY LEU ASN ARG ASN LEU THR ILE SEQRES 19 H 280 LYS ASN ILE GLN GLU ASP ASP GLU SER ASP TYR HIS CYS SEQRES 20 H 280 GLY ALA ASP HIS GLY SER GLY SER ASN LEU ASP TYR VAL SEQRES 21 H 280 VAL PHE GLY GLY GLY THR LYS LEU THR VAL LEU GLY THR SEQRES 22 H 280 LYS HIS HIS HIS HIS HIS HIS HET NAG H1000 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 NAG C8 H15 N O6 FORMUL 4 HOH *54(H2 O) HELIX 1 AA1 GLU A 87 LYS A 89 5 3 HELIX 2 AA2 ASN A 120 GLN A 124 5 5 HELIX 3 AA3 LEU H 65 ARG H 67 5 3 HELIX 4 AA4 THR H 75 LYS H 77 5 3 HELIX 5 AA5 ASP H 88 THR H 92 5 5 HELIX 6 AA6 GLN H 236 GLU H 240 5 5 SHEET 1 AA1 4 LEU A 20 CYS A 24 0 SHEET 2 AA1 4 GLY A 11 GLN A 15 -1 N PHE A 12 O LYS A 23 SHEET 3 AA1 4 ILE A 152 CYS A 157 -1 O TYR A 153 N GLN A 15 SHEET 4 AA1 4 GLU A 144 VAL A 149 -1 N VAL A 149 O ILE A 152 SHEET 1 AA2 2 VAL A 29 LEU A 30 0 SHEET 2 AA2 2 CYS A 36 GLU A 37 -1 O GLU A 37 N VAL A 29 SHEET 1 AA3 3 PRO A 51 GLY A 53 0 SHEET 2 AA3 3 SER A 56 ILE A 61 -1 O SER A 56 N CYS A 52 SHEET 3 AA3 3 SER A 67 CYS A 72 -1 O SER A 67 N ILE A 61 SHEET 1 AA4 4 PRO A 51 GLY A 53 0 SHEET 2 AA4 4 SER A 56 ILE A 61 -1 O SER A 56 N CYS A 52 SHEET 3 AA4 4 TYR H 113 THR H 115 1 O TYR H 113 N LYS A 60 SHEET 4 AA4 4 TYR H 106 TYR H 107 -1 N TYR H 106 O SER H 114 SHEET 1 AA5 2 TYR A 76 MET A 78 0 SHEET 2 AA5 2 CYS A 83 PRO A 85 -1 O ILE A 84 N ASP A 77 SHEET 1 AA6 2 GLY A 96 LEU A 100 0 SHEET 2 AA6 2 GLY A 109 CYS A 113 -1 O SER A 112 N LYS A 97 SHEET 1 AA7 2 LYS A 117 VAL A 118 0 SHEET 2 AA7 2 LYS A 129 ASP A 130 -1 O LYS A 129 N VAL A 118 SHEET 1 AA8 2 PHE A 161 ILE A 163 0 SHEET 2 AA8 2 CYS A 170 GLY A 172 -1 O THR A 171 N ILE A 162 SHEET 1 AA9 4 THR H 3 SER H 7 0 SHEET 2 AA9 4 LEU H 18 SER H 25 -1 O THR H 21 N SER H 7 SHEET 3 AA9 4 GLN H 79 MET H 84 -1 O MET H 84 N LEU H 18 SHEET 4 AA9 4 LEU H 69 ASP H 74 -1 N ASP H 74 O GLN H 79 SHEET 1 AB1 6 LEU H 11 VAL H 12 0 SHEET 2 AB1 6 THR H 126 VAL H 130 1 O THR H 129 N VAL H 12 SHEET 3 AB1 6 ALA H 93 SER H 102 -1 N TYR H 95 O THR H 126 SHEET 4 AB1 6 GLY H 35 GLN H 41 -1 N ILE H 39 O TYR H 96 SHEET 5 AB1 6 GLU H 48 TYR H 54 -1 O GLU H 48 N ARG H 40 SHEET 6 AB1 6 LYS H 59 TYR H 61 -1 O ARG H 60 N LEU H 52 SHEET 1 AB2 4 LEU H 11 VAL H 12 0 SHEET 2 AB2 4 THR H 126 VAL H 130 1 O THR H 129 N VAL H 12 SHEET 3 AB2 4 ALA H 93 SER H 102 -1 N TYR H 95 O THR H 126 SHEET 4 AB2 4 TYR H 117 TRP H 122 -1 O TYR H 121 N HIS H 99 SHEET 1 AB3 6 SER H 161 SER H 165 0 SHEET 2 AB3 6 THR H 264 LEU H 269 1 O LEU H 269 N ALA H 164 SHEET 3 AB3 6 SER H 241 HIS H 249 -1 N TYR H 243 O THR H 264 SHEET 4 AB3 6 VAL H 185 GLN H 190 -1 N TYR H 188 O HIS H 244 SHEET 5 AB3 6 ARG H 197 VAL H 202 -1 O VAL H 199 N TRP H 187 SHEET 6 AB3 6 ILE H 207 VAL H 208 -1 O VAL H 208 N ARG H 201 SHEET 1 AB4 4 SER H 161 SER H 165 0 SHEET 2 AB4 4 THR H 264 LEU H 269 1 O LEU H 269 N ALA H 164 SHEET 3 AB4 4 SER H 241 HIS H 249 -1 N TYR H 243 O THR H 264 SHEET 4 AB4 4 TYR H 257 PHE H 260 -1 O VAL H 259 N ALA H 247 SHEET 1 AB5 3 LEU H 170 THR H 175 0 SHEET 2 AB5 3 ASN H 227 ILE H 232 -1 O LEU H 230 N LEU H 172 SHEET 3 AB5 3 PHE H 219 SER H 224 -1 N SER H 220 O THR H 231 SSBOND 1 CYS A 8 CYS A 22 1555 1555 2.03 SSBOND 2 CYS A 24 CYS A 36 1555 1555 2.04 SSBOND 3 CYS A 43 CYS A 58 1555 1555 2.04 SSBOND 4 CYS A 52 CYS A 70 1555 1555 2.03 SSBOND 5 CYS A 72 CYS A 83 1555 1555 2.03 SSBOND 6 CYS A 88 CYS A 98 1555 1555 2.03 SSBOND 7 CYS A 93 CYS A 111 1555 1555 2.03 SSBOND 8 CYS A 113 CYS A 127 1555 1555 2.03 SSBOND 9 CYS A 135 CYS A 146 1555 1555 2.03 SSBOND 10 CYS A 139 CYS A 155 1555 1555 2.03 SSBOND 11 CYS A 157 CYS A 170 1555 1555 2.04 SSBOND 12 CYS H 22 CYS H 97 1555 1555 2.03 SSBOND 13 CYS H 174 CYS H 245 1555 1555 2.04 LINK ND2 ASN H 229 C1 NAG H1000 1555 1555 1.44 CISPEP 1 ASN A 64 PRO A 65 0 1.31 CRYST1 88.610 55.750 86.090 90.00 103.63 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011285 0.000000 0.002736 0.00000 SCALE2 0.000000 0.017937 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011952 0.00000