HEADER SIGNALING PROTEIN/DE NOVO PROTEIN 03-NOV-22 8F0M TITLE MONOBODY 12D5 BOUND TO KRAS(G12D) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOFORM 2B OF GTPASE KRAS; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: K-RAS 2,KI-RAS,C-K-RAS,C-KI-RAS; COMPND 5 EC: 3.6.5.2; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: MONOBODY 12D5; COMPND 10 CHAIN: B, D; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KRAS, KRAS2, RASK2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SIGNALING PROTEIN-DE NOVO PROTEIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR T.HATTORI,E.GLASSER,P.AKKAPEDDI,G.KETAVARAPU,K.W.TENG,A.KOIDE,S.KOIDE REVDAT 2 25-OCT-23 8F0M 1 REMARK REVDAT 1 19-JUL-23 8F0M 0 JRNL AUTH P.AKKAPEDDI,T.HATTORI,I.KHAN,E.GLASSER,A.KOIDE,G.KETAVARAPU, JRNL AUTH 2 M.WHABY,M.ZUBERI,K.W.TENG,J.LEFLER,L.MASO,I.BANG, JRNL AUTH 3 M.C.OSTROWSKI,J.P.O'BRYAN,S.KOIDE JRNL TITL EXPLORING SWITCH II POCKET CONFORMATION OF KRAS(G12D) WITH JRNL TITL 2 MUTANT-SELECTIVE MONOBODY INHIBITORS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 120 85120 2023 JRNL REFN ESSN 1091-6490 JRNL PMID 37399416 JRNL DOI 10.1073/PNAS.2302485120 REMARK 2 REMARK 2 RESOLUTION. 2.44 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.19.2_4158: 000) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.44 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.90 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 23331 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1189 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.9000 - 4.8000 0.97 2953 171 0.1901 0.2164 REMARK 3 2 4.8000 - 3.8100 0.98 2841 144 0.1648 0.2152 REMARK 3 3 3.8100 - 3.3300 0.99 2839 164 0.1975 0.2402 REMARK 3 4 3.3300 - 3.0300 0.99 2813 125 0.2063 0.2777 REMARK 3 5 3.0300 - 2.8100 0.99 2796 148 0.2440 0.2708 REMARK 3 6 2.8100 - 2.6400 0.98 2792 145 0.2358 0.2864 REMARK 3 7 2.6400 - 2.5100 0.98 2748 157 0.2357 0.2880 REMARK 3 8 2.5100 - 2.4400 0.84 2360 135 0.2585 0.3134 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 4184 REMARK 3 ANGLE : 0.660 5699 REMARK 3 CHIRALITY : 0.047 659 REMARK 3 PLANARITY : 0.007 715 REMARK 3 DIHEDRAL : 9.949 601 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 22.1947 29.3203 36.6075 REMARK 3 T TENSOR REMARK 3 T11: 0.2175 T22: 0.1162 REMARK 3 T33: 0.2407 T12: -0.0022 REMARK 3 T13: -0.0004 T23: -0.0349 REMARK 3 L TENSOR REMARK 3 L11: 1.4052 L22: 0.0917 REMARK 3 L33: 1.3038 L12: -0.1697 REMARK 3 L13: 0.4590 L23: 0.0822 REMARK 3 S TENSOR REMARK 3 S11: -0.0655 S12: -0.0289 S13: 0.1927 REMARK 3 S21: -0.0288 S22: 0.0479 S23: -0.0323 REMARK 3 S31: -0.0525 S32: -0.0937 S33: 0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8F0M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-NOV-22. REMARK 100 THE DEPOSITION ID IS D_1000269732. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-SEP-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23370 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.440 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.44 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.30800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRIES 7L0G & 5VPZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM SULFATE DECAHYDRATE, 20% REMARK 280 W/V PEG3350, 0.05% W/V BENZAMIDINE HYDROCHLORIDE, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,-Y,-Z+1/2 REMARK 290 4555 -X+1/2,-Y,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 75.69300 REMARK 290 SMTRY2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.08100 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 75.69300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 44.08100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 30 REMARK 465 GLU A 31 REMARK 465 TYR A 32 REMARK 465 ASP A 33 REMARK 465 PRO A 34 REMARK 465 THR A 35 REMARK 465 ILE A 36 REMARK 465 LYS A 169 REMARK 465 GLY B 0 REMARK 465 SER B 1 REMARK 465 SER B 2 REMARK 465 ILE B 94 REMARK 465 ASP B 95 REMARK 465 LYS B 96 REMARK 465 GLY C -1 REMARK 465 SER C 0 REMARK 465 PHE C 28 REMARK 465 VAL C 29 REMARK 465 LYS C 169 REMARK 465 GLY D 0 REMARK 465 ILE D 94 REMARK 465 ASP D 95 REMARK 465 LYS D 96 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 28 -77.27 -104.40 REMARK 500 GLN C 25 -138.04 62.13 REMARK 500 ASN C 26 45.00 -101.88 REMARK 500 TYR C 32 39.15 -89.64 REMARK 500 ASP C 38 104.96 -38.62 REMARK 500 HIS C 166 -14.82 74.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A -1 O REMARK 620 2 SER C 17 OG 36.9 REMARK 620 3 GSP C 202 O3G 32.4 4.9 REMARK 620 4 GSP C 202 O1B 35.4 2.1 3.0 REMARK 620 5 HOH C 312 O 33.6 3.8 3.9 3.6 REMARK 620 6 HOH C 313 O 35.7 4.1 3.7 2.5 6.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 17 OG REMARK 620 2 GDP A 202 O2B 86.2 REMARK 620 3 HOH A 305 O 82.2 91.8 REMARK 620 4 HOH A 312 O 73.1 84.0 155.1 REMARK 620 5 HOH A 313 O 166.4 101.6 108.4 96.4 REMARK 620 6 HOH A 315 O 75.1 158.6 95.8 80.8 95.0 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8EZG RELATED DB: PDB REMARK 900 VARIANT OF MONOBODY 12D5 COMPLEXED WITH KRAS(G12D) DBREF 8F0M A 1 169 UNP P01116-2 RASK_HUMAN 1 169 DBREF 8F0M B 0 96 PDB 8F0M 8F0M 0 96 DBREF 8F0M C 1 169 UNP P01116-2 RASK_HUMAN 1 169 DBREF 8F0M D 0 96 PDB 8F0M 8F0M 0 96 SEQADV 8F0M GLY A -1 UNP P01116-2 EXPRESSION TAG SEQADV 8F0M SER A 0 UNP P01116-2 EXPRESSION TAG SEQADV 8F0M ASP A 12 UNP P01116-2 GLY 12 ENGINEERED MUTATION SEQADV 8F0M SER A 51 UNP P01116-2 CYS 51 ENGINEERED MUTATION SEQADV 8F0M LEU A 80 UNP P01116-2 CYS 80 ENGINEERED MUTATION SEQADV 8F0M SER A 118 UNP P01116-2 CYS 118 ENGINEERED MUTATION SEQADV 8F0M GLY C -1 UNP P01116-2 EXPRESSION TAG SEQADV 8F0M SER C 0 UNP P01116-2 EXPRESSION TAG SEQADV 8F0M ASP C 12 UNP P01116-2 GLY 12 ENGINEERED MUTATION SEQADV 8F0M SER C 51 UNP P01116-2 CYS 51 ENGINEERED MUTATION SEQADV 8F0M LEU C 80 UNP P01116-2 CYS 80 ENGINEERED MUTATION SEQADV 8F0M SER C 118 UNP P01116-2 CYS 118 ENGINEERED MUTATION SEQRES 1 A 171 GLY SER MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA SEQRES 2 A 171 ASP GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE SEQRES 3 A 171 GLN ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU SEQRES 4 A 171 ASP SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR SEQRES 5 A 171 SER LEU LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU SEQRES 6 A 171 TYR SER ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU SEQRES 7 A 171 GLY PHE LEU LEU VAL PHE ALA ILE ASN ASN THR LYS SER SEQRES 8 A 171 PHE GLU ASP ILE HIS HIS TYR ARG GLU GLN ILE LYS ARG SEQRES 9 A 171 VAL LYS ASP SER GLU ASP VAL PRO MET VAL LEU VAL GLY SEQRES 10 A 171 ASN LYS SER ASP LEU PRO SER ARG THR VAL ASP THR LYS SEQRES 11 A 171 GLN ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO PHE SEQRES 12 A 171 ILE GLU THR SER ALA LYS THR ARG GLN GLY VAL ASP ASP SEQRES 13 A 171 ALA PHE TYR THR LEU VAL ARG GLU ILE ARG LYS HIS LYS SEQRES 14 A 171 GLU LYS SEQRES 1 B 97 GLY SER SER SER VAL PRO THR LYS LEU GLU VAL VAL ALA SEQRES 2 B 97 ALA THR PRO THR SER LEU LEU VAL SER TRP ASP ALA PRO SEQRES 3 B 97 ALA VAL THR VAL VAL PHE TYR ASP ILE THR TYR GLY GLU SEQRES 4 B 97 THR GLY GLY ASN SER PRO VAL GLN GLU PHE THR VAL PRO SEQRES 5 B 97 GLY SER LYS SER THR ALA THR ILE SER GLY LEU SER PRO SEQRES 6 B 97 GLY VAL ASP TYR THR ILE THR VAL TYR ALA LYS TYR LEU SEQRES 7 B 97 PHE TRP SER GLY TYR SER SER PRO ILE SER ILE ASN TYR SEQRES 8 B 97 ARG THR GLU ILE ASP LYS SEQRES 1 C 171 GLY SER MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA SEQRES 2 C 171 ASP GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE SEQRES 3 C 171 GLN ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU SEQRES 4 C 171 ASP SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR SEQRES 5 C 171 SER LEU LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU SEQRES 6 C 171 TYR SER ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU SEQRES 7 C 171 GLY PHE LEU LEU VAL PHE ALA ILE ASN ASN THR LYS SER SEQRES 8 C 171 PHE GLU ASP ILE HIS HIS TYR ARG GLU GLN ILE LYS ARG SEQRES 9 C 171 VAL LYS ASP SER GLU ASP VAL PRO MET VAL LEU VAL GLY SEQRES 10 C 171 ASN LYS SER ASP LEU PRO SER ARG THR VAL ASP THR LYS SEQRES 11 C 171 GLN ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO PHE SEQRES 12 C 171 ILE GLU THR SER ALA LYS THR ARG GLN GLY VAL ASP ASP SEQRES 13 C 171 ALA PHE TYR THR LEU VAL ARG GLU ILE ARG LYS HIS LYS SEQRES 14 C 171 GLU LYS SEQRES 1 D 97 GLY SER SER SER VAL PRO THR LYS LEU GLU VAL VAL ALA SEQRES 2 D 97 ALA THR PRO THR SER LEU LEU VAL SER TRP ASP ALA PRO SEQRES 3 D 97 ALA VAL THR VAL VAL PHE TYR ASP ILE THR TYR GLY GLU SEQRES 4 D 97 THR GLY GLY ASN SER PRO VAL GLN GLU PHE THR VAL PRO SEQRES 5 D 97 GLY SER LYS SER THR ALA THR ILE SER GLY LEU SER PRO SEQRES 6 D 97 GLY VAL ASP TYR THR ILE THR VAL TYR ALA LYS TYR LEU SEQRES 7 D 97 PHE TRP SER GLY TYR SER SER PRO ILE SER ILE ASN TYR SEQRES 8 D 97 ARG THR GLU ILE ASP LYS HET MG A 201 1 HET GDP A 202 28 HET GLC A 203 12 HET GLC B 201 12 HET MG C 201 1 HET GSP C 202 32 HETNAM MG MAGNESIUM ION HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM GSP 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 5 MG 2(MG 2+) FORMUL 6 GDP C10 H15 N5 O11 P2 FORMUL 7 GLC 2(C6 H12 O6) FORMUL 10 GSP C10 H16 N5 O13 P3 S FORMUL 11 HOH *102(H2 O) HELIX 1 AA1 GLY A 15 ASN A 26 1 12 HELIX 2 AA2 GLY A 60 TYR A 64 5 5 HELIX 3 AA3 SER A 65 ARG A 73 1 9 HELIX 4 AA4 ASN A 86 ASP A 92 1 7 HELIX 5 AA5 ASP A 92 ASP A 105 1 14 HELIX 6 AA6 ASP A 126 GLY A 138 1 13 HELIX 7 AA7 GLY A 151 GLU A 168 1 18 HELIX 8 AA8 GLY C 15 GLN C 25 1 11 HELIX 9 AA9 GLY C 60 TYR C 64 5 5 HELIX 10 AB1 SER C 65 MET C 72 1 8 HELIX 11 AB2 ARG C 73 GLY C 75 5 3 HELIX 12 AB3 ASN C 86 ASP C 92 1 7 HELIX 13 AB4 ASP C 92 ASP C 105 1 14 HELIX 14 AB5 ASP C 126 GLY C 138 1 13 HELIX 15 AB6 GLY C 151 LYS C 165 1 15 SHEET 1 AA1 6 SER A 39 ILE A 46 0 SHEET 2 AA1 6 GLU A 49 LEU A 56 -1 O LEU A 53 N LYS A 42 SHEET 3 AA1 6 THR A 2 GLY A 10 1 N TYR A 4 O ASP A 54 SHEET 4 AA1 6 GLY A 77 ALA A 83 1 O VAL A 81 N VAL A 9 SHEET 5 AA1 6 MET A 111 ASN A 116 1 O VAL A 114 N LEU A 80 SHEET 6 AA1 6 PHE A 141 GLU A 143 1 O ILE A 142 N GLY A 115 SHEET 1 AA2 3 THR B 6 THR B 14 0 SHEET 2 AA2 3 SER B 17 ASP B 23 -1 O ASP B 23 N THR B 6 SHEET 3 AA2 3 THR B 56 ILE B 59 -1 O ALA B 57 N VAL B 20 SHEET 1 AA3 4 GLN B 46 PRO B 51 0 SHEET 2 AA3 4 VAL B 29 GLU B 38 -1 N ILE B 34 O PHE B 48 SHEET 3 AA3 4 ASP B 67 TYR B 76 -1 O LYS B 75 N PHE B 31 SHEET 4 AA3 4 ILE B 86 ARG B 91 -1 O TYR B 90 N TYR B 68 SHEET 1 AA4 6 TYR C 40 ILE C 46 0 SHEET 2 AA4 6 GLU C 49 LEU C 56 -1 O ILE C 55 N TYR C 40 SHEET 3 AA4 6 THR C 2 GLY C 10 1 N TYR C 4 O ASP C 54 SHEET 4 AA4 6 GLY C 77 ALA C 83 1 O VAL C 81 N VAL C 9 SHEET 5 AA4 6 MET C 111 ASN C 116 1 O ASN C 116 N PHE C 82 SHEET 6 AA4 6 PHE C 141 GLU C 143 1 O ILE C 142 N LEU C 113 SHEET 1 AA5 3 THR D 6 THR D 14 0 SHEET 2 AA5 3 SER D 17 ASP D 23 -1 O ASP D 23 N THR D 6 SHEET 3 AA5 3 THR D 56 ILE D 59 -1 O ILE D 59 N LEU D 18 SHEET 1 AA6 4 GLN D 46 PRO D 51 0 SHEET 2 AA6 4 VAL D 29 GLU D 38 -1 N ILE D 34 O PHE D 48 SHEET 3 AA6 4 ASP D 67 TYR D 76 -1 O THR D 69 N GLY D 37 SHEET 4 AA6 4 ILE D 86 ARG D 91 -1 O ILE D 88 N ILE D 70 LINK O GLY A -1 MG MG C 201 1555 2556 1.97 LINK OG SER A 17 MG MG A 201 1555 1555 2.20 LINK MG MG A 201 O2B GDP A 202 1555 1555 2.06 LINK MG MG A 201 O HOH A 305 1555 1555 2.40 LINK MG MG A 201 O HOH A 312 1555 1555 2.10 LINK MG MG A 201 O HOH A 313 1555 1555 2.12 LINK MG MG A 201 O HOH A 315 1555 1555 2.02 LINK OG SER C 17 MG MG C 201 1555 1555 2.02 LINK MG MG C 201 O3G GSP C 202 1555 1555 1.96 LINK MG MG C 201 O1B GSP C 202 1555 1555 1.94 LINK MG MG C 201 O HOH C 312 1555 1555 2.38 LINK MG MG C 201 O HOH C 313 1555 1555 2.28 CRYST1 151.386 44.733 88.162 90.00 90.00 90.00 P 21 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006606 0.000000 0.000000 0.00000 SCALE2 0.000000 0.022355 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011343 0.00000