HEADER ANTIVIRAL PROTEIN 08-NOV-22 8F2X TITLE CRYSTAL STRUCTURE OF ANTIBODY WRAIR-2123 IN COMPLEX WITH SARS-COV-2 TITLE 2 RECEPTOR BINDING DOMAIN CAVEAT 8F2X NAG B 1 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPIKE PROTEIN S1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RECEPTOR BINDING DOMAIN (RBD); COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: SARS-COV-2 RBD; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: WRAIR-2123 FAB HEAVY CHAIN; COMPND 9 CHAIN: H; COMPND 10 ENGINEERED: YES; COMPND 11 OTHER_DETAILS: ANTIBODY HEAVY CHAIN - FAB FRAGMENT; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: WRAIR-2123 FAB LIGHT CHAIN; COMPND 14 CHAIN: L; COMPND 15 ENGINEERED: YES; COMPND 16 OTHER_DETAILS: ANTIBODY LIGHT CHAIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_COMMON: SARS-COV-2, 2019-NCOV, COVID-19 VIRUS; SOURCE 5 ORGANISM_TAXID: 2697049; SOURCE 6 GENE: S, 2; SOURCE 7 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 14 MOL_ID: 3; SOURCE 15 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 16 ORGANISM_TAXID: 9606; SOURCE 17 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS WRAIR-2123, SARS-COV-2, RBD, ANTIBODY, ANTIVIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.S.SANKHALA,G.M.JOYCE REVDAT 1 17-APR-24 8F2X 0 JRNL AUTH R.S.SANKHALA,J.JENSEN,K.MODJARRAD,M.NELSON,M.G.JOYCE JRNL TITL ANTIBODY TARGETING OF CONSERVED SITES OF VULNERABILITY ON JRNL TITL 2 THE SARS-COV-2 SPIKE RECEPTOR-BINDING DOMAIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1-2575-000 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.41 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 54.1 REMARK 3 NUMBER OF REFLECTIONS : 5452 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.248 REMARK 3 R VALUE (WORKING SET) : 0.245 REMARK 3 FREE R VALUE : 0.324 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.510 REMARK 3 FREE R VALUE TEST SET COUNT : 246 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 10.0000 - 4.4106 0.77 3766 177 0.2505 0.2959 REMARK 3 2 4.4106 - 3.5013 0.31 1440 69 0.2283 0.4122 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.500 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.330 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 4986 REMARK 3 ANGLE : 0.552 6790 REMARK 3 CHIRALITY : 0.049 757 REMARK 3 PLANARITY : 0.004 873 REMARK 3 DIHEDRAL : 13.333 2966 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 33 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 333 THROUGH 375 ) REMARK 3 ORIGIN FOR THE GROUP (A): 86.7593 173.7029-165.0833 REMARK 3 T TENSOR REMARK 3 T11: 0.4807 T22: 0.2490 REMARK 3 T33: 0.4219 T12: 0.1943 REMARK 3 T13: -0.0808 T23: 0.0462 REMARK 3 L TENSOR REMARK 3 L11: 1.6195 L22: 1.3833 REMARK 3 L33: 0.8031 L12: -0.4781 REMARK 3 L13: 0.2221 L23: 0.4436 REMARK 3 S TENSOR REMARK 3 S11: -0.3260 S12: -0.3482 S13: 0.5651 REMARK 3 S21: 0.3734 S22: 0.0215 S23: 0.1627 REMARK 3 S31: -0.3527 S32: -0.3115 S33: 0.1327 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 376 THROUGH 393 ) REMARK 3 ORIGIN FOR THE GROUP (A): 84.3163 168.4653-152.0909 REMARK 3 T TENSOR REMARK 3 T11: 0.5193 T22: 0.6260 REMARK 3 T33: 0.6229 T12: 0.4825 REMARK 3 T13: 0.2273 T23: 0.0480 REMARK 3 L TENSOR REMARK 3 L11: 1.0018 L22: 5.0381 REMARK 3 L33: 3.2763 L12: 0.5836 REMARK 3 L13: 0.3246 L23: 2.8132 REMARK 3 S TENSOR REMARK 3 S11: -0.4917 S12: -0.5462 S13: 0.4927 REMARK 3 S21: 0.6347 S22: -0.3713 S23: 0.9532 REMARK 3 S31: -0.1496 S32: -0.7010 S33: 0.1439 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 394 THROUGH 451 ) REMARK 3 ORIGIN FOR THE GROUP (A): 89.4273 160.2530-168.8569 REMARK 3 T TENSOR REMARK 3 T11: 0.2380 T22: 0.6357 REMARK 3 T33: 0.2765 T12: 0.0908 REMARK 3 T13: 0.0113 T23: 0.0017 REMARK 3 L TENSOR REMARK 3 L11: 0.4750 L22: 1.9872 REMARK 3 L33: 2.3108 L12: 0.1488 REMARK 3 L13: -0.1509 L23: 1.4385 REMARK 3 S TENSOR REMARK 3 S11: -0.0781 S12: -0.1598 S13: 0.1687 REMARK 3 S21: 0.2039 S22: -0.2269 S23: 0.1482 REMARK 3 S31: 0.1555 S32: -0.0114 S33: 0.1791 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 452 THROUGH 469 ) REMARK 3 ORIGIN FOR THE GROUP (A): 101.9488 157.1860-170.4631 REMARK 3 T TENSOR REMARK 3 T11: 0.2308 T22: 0.2913 REMARK 3 T33: 0.1040 T12: 0.0808 REMARK 3 T13: -0.2295 T23: -0.4464 REMARK 3 L TENSOR REMARK 3 L11: 0.5407 L22: 0.8567 REMARK 3 L33: 1.5480 L12: 0.4019 REMARK 3 L13: 0.1243 L23: -0.8229 REMARK 3 S TENSOR REMARK 3 S11: 0.2437 S12: -0.1297 S13: -0.0030 REMARK 3 S21: 0.1908 S22: -0.0047 S23: 0.0580 REMARK 3 S31: -0.0855 S32: 0.2961 S33: 0.7041 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 470 THROUGH 529 ) REMARK 3 ORIGIN FOR THE GROUP (A): 95.4132 159.0726-172.3211 REMARK 3 T TENSOR REMARK 3 T11: 0.4136 T22: 0.7454 REMARK 3 T33: 0.2975 T12: 0.2027 REMARK 3 T13: -0.0008 T23: 0.1869 REMARK 3 L TENSOR REMARK 3 L11: 1.2752 L22: 1.5317 REMARK 3 L33: 0.7889 L12: 0.1137 REMARK 3 L13: -0.3307 L23: 0.7901 REMARK 3 S TENSOR REMARK 3 S11: 0.2956 S12: -0.3744 S13: -0.0574 REMARK 3 S21: 0.2695 S22: -0.3920 S23: -0.3658 REMARK 3 S31: 0.3551 S32: -0.0873 S33: -0.1667 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 1 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): 76.9589 134.2491-191.8493 REMARK 3 T TENSOR REMARK 3 T11: 0.1312 T22: 0.6576 REMARK 3 T33: 0.8394 T12: -0.0328 REMARK 3 T13: 0.1681 T23: 0.0136 REMARK 3 L TENSOR REMARK 3 L11: 1.7672 L22: 3.4330 REMARK 3 L33: 0.4356 L12: -0.3322 REMARK 3 L13: 0.5726 L23: 0.0301 REMARK 3 S TENSOR REMARK 3 S11: -0.1326 S12: -0.4515 S13: 0.4085 REMARK 3 S21: 0.2502 S22: 0.0654 S23: 0.1992 REMARK 3 S31: -0.1131 S32: -0.0294 S33: -0.2513 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 11 THROUGH 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): 88.4141 124.6246-199.7345 REMARK 3 T TENSOR REMARK 3 T11: 0.4429 T22: 0.6492 REMARK 3 T33: 0.2264 T12: 0.1494 REMARK 3 T13: 0.1247 T23: 0.1330 REMARK 3 L TENSOR REMARK 3 L11: 0.7435 L22: 0.7683 REMARK 3 L33: 1.2565 L12: -0.1751 REMARK 3 L13: -0.0915 L23: -0.3973 REMARK 3 S TENSOR REMARK 3 S11: 0.2099 S12: -0.1744 S13: -0.0818 REMARK 3 S21: -0.1544 S22: -0.0468 S23: 0.0295 REMARK 3 S31: 0.0315 S32: 0.0987 S33: 0.2115 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 24 THROUGH 39 ) REMARK 3 ORIGIN FOR THE GROUP (A): 84.4923 140.0345-189.5174 REMARK 3 T TENSOR REMARK 3 T11: 0.1246 T22: 0.2716 REMARK 3 T33: 0.2566 T12: -0.1315 REMARK 3 T13: -0.0416 T23: -0.0957 REMARK 3 L TENSOR REMARK 3 L11: 2.0759 L22: 0.6668 REMARK 3 L33: 1.9534 L12: 1.1780 REMARK 3 L13: 0.1862 L23: 0.1046 REMARK 3 S TENSOR REMARK 3 S11: -0.0225 S12: 0.0221 S13: 0.1519 REMARK 3 S21: -0.2760 S22: 0.2174 S23: 0.5044 REMARK 3 S31: -0.1660 S32: -0.2104 S33: 0.2625 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 40 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): 93.5342 135.7633-188.4087 REMARK 3 T TENSOR REMARK 3 T11: 0.2854 T22: 0.4919 REMARK 3 T33: 0.2082 T12: 0.2059 REMARK 3 T13: 0.0797 T23: -0.0694 REMARK 3 L TENSOR REMARK 3 L11: 1.8201 L22: 1.7110 REMARK 3 L33: 0.8051 L12: -0.2114 REMARK 3 L13: -0.0080 L23: -0.1830 REMARK 3 S TENSOR REMARK 3 S11: 0.1246 S12: -0.1140 S13: 0.6530 REMARK 3 S21: -0.0648 S22: -0.4071 S23: 0.0395 REMARK 3 S31: 0.0689 S32: 0.0273 S33: -0.2005 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 62 THROUGH 73 ) REMARK 3 ORIGIN FOR THE GROUP (A): 95.5775 133.5780-194.9637 REMARK 3 T TENSOR REMARK 3 T11: 0.4339 T22: 0.9876 REMARK 3 T33: 0.5596 T12: 0.1560 REMARK 3 T13: -0.0599 T23: -0.0515 REMARK 3 L TENSOR REMARK 3 L11: 0.2690 L22: 3.1362 REMARK 3 L33: 1.1002 L12: 0.8928 REMARK 3 L13: -0.0168 L23: 0.3841 REMARK 3 S TENSOR REMARK 3 S11: 0.2500 S12: 0.2291 S13: 0.2515 REMARK 3 S21: -0.3833 S22: -0.0132 S23: -0.2518 REMARK 3 S31: 0.3303 S32: 0.7429 S33: 0.0521 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 74 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): 85.7706 138.0217-198.9122 REMARK 3 T TENSOR REMARK 3 T11: 0.3116 T22: 0.2349 REMARK 3 T33: 0.3949 T12: 0.0324 REMARK 3 T13: 0.0934 T23: -0.0871 REMARK 3 L TENSOR REMARK 3 L11: 1.5383 L22: 0.0300 REMARK 3 L33: 0.1744 L12: -0.0424 REMARK 3 L13: 0.3448 L23: 0.0476 REMARK 3 S TENSOR REMARK 3 S11: 0.1794 S12: -0.0623 S13: 0.7946 REMARK 3 S21: -0.2820 S22: -0.1871 S23: -0.1246 REMARK 3 S31: -0.1372 S32: -0.4736 S33: -0.0376 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 84 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): 89.8680 127.1938-190.3109 REMARK 3 T TENSOR REMARK 3 T11: 0.2508 T22: 0.3746 REMARK 3 T33: 0.6500 T12: -0.0788 REMARK 3 T13: -0.0230 T23: -0.4446 REMARK 3 L TENSOR REMARK 3 L11: 0.2418 L22: 0.7280 REMARK 3 L33: 0.6208 L12: 0.0358 REMARK 3 L13: 0.1057 L23: -0.0028 REMARK 3 S TENSOR REMARK 3 S11: -0.2292 S12: 0.1863 S13: -0.1726 REMARK 3 S21: -0.0630 S22: 0.0585 S23: -0.2073 REMARK 3 S31: -0.1466 S32: 0.0440 S33: -0.2504 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 100 THROUGH 109 ) REMARK 3 ORIGIN FOR THE GROUP (A): 92.4969 149.3186-185.1774 REMARK 3 T TENSOR REMARK 3 T11: 0.3122 T22: 0.7577 REMARK 3 T33: 0.6744 T12: -0.1083 REMARK 3 T13: -0.0725 T23: 0.4925 REMARK 3 L TENSOR REMARK 3 L11: 1.5477 L22: 2.1583 REMARK 3 L33: 1.8799 L12: -1.3238 REMARK 3 L13: 1.7046 L23: -1.4297 REMARK 3 S TENSOR REMARK 3 S11: 0.1578 S12: 0.1820 S13: 0.0584 REMARK 3 S21: 0.0094 S22: -0.1568 S23: -0.2653 REMARK 3 S31: 0.1764 S32: 0.2055 S33: 0.3635 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 110 THROUGH 125 ) REMARK 3 ORIGIN FOR THE GROUP (A): 83.4311 132.6799-186.3370 REMARK 3 T TENSOR REMARK 3 T11: 0.1676 T22: 0.3636 REMARK 3 T33: 0.6878 T12: -0.2961 REMARK 3 T13: -0.1553 T23: 0.3514 REMARK 3 L TENSOR REMARK 3 L11: 0.7222 L22: 1.8352 REMARK 3 L33: 0.7916 L12: 0.7486 REMARK 3 L13: -0.3749 L23: 0.2783 REMARK 3 S TENSOR REMARK 3 S11: 0.2407 S12: -0.1783 S13: 0.1198 REMARK 3 S21: 0.1755 S22: -0.0459 S23: 0.4062 REMARK 3 S31: -0.1469 S32: 0.0117 S33: 0.1628 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 126 THROUGH 138 ) REMARK 3 ORIGIN FOR THE GROUP (A): 76.9995 104.9713-193.2790 REMARK 3 T TENSOR REMARK 3 T11: 0.1089 T22: 0.4494 REMARK 3 T33: 0.4972 T12: 0.2135 REMARK 3 T13: -0.0334 T23: 0.1877 REMARK 3 L TENSOR REMARK 3 L11: 2.1314 L22: 0.3828 REMARK 3 L33: 0.5774 L12: -0.1394 REMARK 3 L13: -0.3083 L23: 0.1414 REMARK 3 S TENSOR REMARK 3 S11: 0.1393 S12: 0.3080 S13: 0.2552 REMARK 3 S21: -0.1730 S22: -0.1041 S23: -0.3293 REMARK 3 S31: 0.0036 S32: 0.1866 S33: 0.2902 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 139 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): 61.0236 96.6742-175.1760 REMARK 3 T TENSOR REMARK 3 T11: 0.7172 T22: 0.3828 REMARK 3 T33: 0.8681 T12: 0.3490 REMARK 3 T13: -0.0988 T23: 0.1801 REMARK 3 L TENSOR REMARK 3 L11: 0.1574 L22: 2.1032 REMARK 3 L33: 0.2069 L12: -0.0923 REMARK 3 L13: 0.0253 L23: -0.1870 REMARK 3 S TENSOR REMARK 3 S11: 0.0450 S12: 0.0385 S13: -0.0584 REMARK 3 S21: -0.4244 S22: -0.1543 S23: -0.0330 REMARK 3 S31: -0.0070 S32: 0.0431 S33: 0.1500 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 150 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): 71.7935 108.1226-187.0083 REMARK 3 T TENSOR REMARK 3 T11: 0.3325 T22: 0.9238 REMARK 3 T33: 0.4866 T12: 0.4024 REMARK 3 T13: 0.2905 T23: 0.3563 REMARK 3 L TENSOR REMARK 3 L11: 1.1986 L22: 0.6197 REMARK 3 L33: 1.1565 L12: -0.1952 REMARK 3 L13: -0.6209 L23: 0.0057 REMARK 3 S TENSOR REMARK 3 S11: 0.2995 S12: 0.1315 S13: 0.1736 REMARK 3 S21: -0.0286 S22: 0.0353 S23: -0.0608 REMARK 3 S31: -0.2840 S32: -0.1302 S33: 0.5846 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 169 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): 61.3325 113.1104-180.5476 REMARK 3 T TENSOR REMARK 3 T11: 0.0373 T22: 0.5856 REMARK 3 T33: 0.8148 T12: 0.1761 REMARK 3 T13: -0.1043 T23: 0.5262 REMARK 3 L TENSOR REMARK 3 L11: 1.2403 L22: 0.8994 REMARK 3 L33: 0.5528 L12: -0.5440 REMARK 3 L13: -0.8269 L23: 0.4206 REMARK 3 S TENSOR REMARK 3 S11: 0.0200 S12: -0.0110 S13: -0.0380 REMARK 3 S21: -0.0578 S22: 0.1117 S23: 0.3972 REMARK 3 S31: -0.0615 S32: -0.2805 S33: 0.1665 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 180 THROUGH 189 ) REMARK 3 ORIGIN FOR THE GROUP (A): 81.6695 106.6388-184.8970 REMARK 3 T TENSOR REMARK 3 T11: 0.8943 T22: 1.0753 REMARK 3 T33: 0.1774 T12: -0.1909 REMARK 3 T13: -0.0028 T23: -0.3075 REMARK 3 L TENSOR REMARK 3 L11: 0.3337 L22: 0.2943 REMARK 3 L33: 1.3826 L12: -0.3142 REMARK 3 L13: -0.6353 L23: 0.5880 REMARK 3 S TENSOR REMARK 3 S11: 0.0258 S12: -0.0262 S13: -0.0327 REMARK 3 S21: 0.0735 S22: -0.1035 S23: 0.0252 REMARK 3 S31: 0.1722 S32: -0.0205 S33: -0.0936 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 190 THROUGH 198 ) REMARK 3 ORIGIN FOR THE GROUP (A): 70.0945 107.2788-181.2246 REMARK 3 T TENSOR REMARK 3 T11: 0.4167 T22: 0.5978 REMARK 3 T33: 0.3999 T12: 0.2769 REMARK 3 T13: 0.3824 T23: 0.1298 REMARK 3 L TENSOR REMARK 3 L11: 0.2386 L22: 0.5437 REMARK 3 L33: 0.3029 L12: 0.0705 REMARK 3 L13: 0.0019 L23: 0.0666 REMARK 3 S TENSOR REMARK 3 S11: -0.0727 S12: 0.0064 S13: -0.0923 REMARK 3 S21: 0.0977 S22: 0.3896 S23: 0.0834 REMARK 3 S31: -0.0943 S32: -0.0064 S33: 0.0701 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 199 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): 58.3301 105.6968-183.9710 REMARK 3 T TENSOR REMARK 3 T11: 0.5958 T22: 0.8593 REMARK 3 T33: 0.8218 T12: -0.2956 REMARK 3 T13: -0.0078 T23: -0.0041 REMARK 3 L TENSOR REMARK 3 L11: 3.0721 L22: 0.5546 REMARK 3 L33: 0.5991 L12: 0.3713 REMARK 3 L13: -1.1718 L23: 0.1464 REMARK 3 S TENSOR REMARK 3 S11: -0.2833 S12: -0.1175 S13: 0.1657 REMARK 3 S21: 0.2911 S22: -0.2597 S23: 0.5501 REMARK 3 S31: 0.0074 S32: -0.2382 S33: 0.2451 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 215 THROUGH 228 ) REMARK 3 ORIGIN FOR THE GROUP (A): 65.4315 105.1266-192.1328 REMARK 3 T TENSOR REMARK 3 T11: 0.2302 T22: 0.3902 REMARK 3 T33: 0.4173 T12: -0.0824 REMARK 3 T13: 0.1662 T23: 0.3522 REMARK 3 L TENSOR REMARK 3 L11: 0.6767 L22: 3.4215 REMARK 3 L33: 2.7748 L12: 1.3153 REMARK 3 L13: -0.9217 L23: -2.0503 REMARK 3 S TENSOR REMARK 3 S11: -0.1012 S12: 0.0286 S13: -0.1235 REMARK 3 S21: -0.2788 S22: 0.2062 S23: 0.3453 REMARK 3 S31: -0.1542 S32: -0.3388 S33: -0.2378 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 2 THROUGH 21 ) REMARK 3 ORIGIN FOR THE GROUP (A): 86.5174 128.2101-164.1386 REMARK 3 T TENSOR REMARK 3 T11: 0.4868 T22: 0.0539 REMARK 3 T33: 0.8917 T12: 0.1283 REMARK 3 T13: 0.1001 T23: -0.0011 REMARK 3 L TENSOR REMARK 3 L11: 0.0342 L22: 0.9252 REMARK 3 L33: 0.4718 L12: 0.1222 REMARK 3 L13: 0.0131 L23: -0.3398 REMARK 3 S TENSOR REMARK 3 S11: -0.0607 S12: -0.0167 S13: -0.0027 REMARK 3 S21: 0.1459 S22: -0.1917 S23: -0.0260 REMARK 3 S31: 0.0963 S32: 0.0602 S33: 0.0225 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 22 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): 97.6232 137.6825-168.7239 REMARK 3 T TENSOR REMARK 3 T11: 0.7232 T22: 0.3985 REMARK 3 T33: 0.4336 T12: -0.1699 REMARK 3 T13: -0.2693 T23: 0.1505 REMARK 3 L TENSOR REMARK 3 L11: 1.3550 L22: 4.7830 REMARK 3 L33: 2.6187 L12: 1.6803 REMARK 3 L13: -1.7027 L23: -3.2497 REMARK 3 S TENSOR REMARK 3 S11: 0.4015 S12: 0.1032 S13: -0.4007 REMARK 3 S21: -0.4975 S22: -0.2496 S23: -0.0605 REMARK 3 S31: -0.0346 S32: 0.1518 S33: 0.4377 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 33 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): 81.1214 133.0305-175.3284 REMARK 3 T TENSOR REMARK 3 T11: 0.2968 T22: 1.0034 REMARK 3 T33: 0.2401 T12: -0.1227 REMARK 3 T13: 0.0913 T23: -0.0777 REMARK 3 L TENSOR REMARK 3 L11: 1.0644 L22: 1.2315 REMARK 3 L33: 3.6349 L12: 0.0195 REMARK 3 L13: -1.4029 L23: 0.1759 REMARK 3 S TENSOR REMARK 3 S11: 0.0861 S12: 0.2730 S13: 0.0904 REMARK 3 S21: -0.0491 S22: 0.0808 S23: 0.1481 REMARK 3 S31: 0.0533 S32: -0.4071 S33: 0.1861 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 49 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): 78.5783 142.3906-170.0687 REMARK 3 T TENSOR REMARK 3 T11: 0.6141 T22: 0.9777 REMARK 3 T33: 0.1186 T12: 0.2205 REMARK 3 T13: -0.0307 T23: 0.0798 REMARK 3 L TENSOR REMARK 3 L11: 0.6631 L22: 0.5466 REMARK 3 L33: 0.7062 L12: -0.4007 REMARK 3 L13: -0.6108 L23: 0.5787 REMARK 3 S TENSOR REMARK 3 S11: -0.2206 S12: 0.0228 S13: 0.0561 REMARK 3 S21: 0.3990 S22: -0.0337 S23: 0.0230 REMARK 3 S31: 0.5095 S32: -0.5803 S33: -0.1466 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 62 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): 85.3188 134.6608-168.7561 REMARK 3 T TENSOR REMARK 3 T11: 0.2228 T22: 0.4200 REMARK 3 T33: 0.3503 T12: 0.5050 REMARK 3 T13: 0.2331 T23: 0.1653 REMARK 3 L TENSOR REMARK 3 L11: 0.8531 L22: 1.1952 REMARK 3 L33: 0.8045 L12: -0.3048 REMARK 3 L13: -0.0069 L23: 0.3167 REMARK 3 S TENSOR REMARK 3 S11: 0.0313 S12: 0.3137 S13: 0.2196 REMARK 3 S21: 0.2518 S22: -0.1029 S23: 0.2086 REMARK 3 S31: 0.1258 S32: 0.4569 S33: -0.1055 REMARK 3 TLS GROUP : 28 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 96 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): 76.5841 115.9166-168.0615 REMARK 3 T TENSOR REMARK 3 T11: 0.5825 T22: 0.3067 REMARK 3 T33: 0.4060 T12: -0.0064 REMARK 3 T13: 0.2437 T23: -0.0848 REMARK 3 L TENSOR REMARK 3 L11: 0.0409 L22: 0.0455 REMARK 3 L33: 0.7745 L12: 0.0165 REMARK 3 L13: 0.1937 L23: 0.0573 REMARK 3 S TENSOR REMARK 3 S11: -0.0409 S12: 0.3459 S13: 0.1831 REMARK 3 S21: 0.2953 S22: 0.0246 S23: 0.0783 REMARK 3 S31: 0.1630 S32: -0.5046 S33: 0.0982 REMARK 3 TLS GROUP : 29 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 119 THROUGH 150 ) REMARK 3 ORIGIN FOR THE GROUP (A): 74.7247 99.6315-175.9340 REMARK 3 T TENSOR REMARK 3 T11: 0.4164 T22: 0.7701 REMARK 3 T33: 0.4552 T12: -0.1126 REMARK 3 T13: 0.1625 T23: -0.0480 REMARK 3 L TENSOR REMARK 3 L11: 2.0917 L22: 3.0181 REMARK 3 L33: 1.5373 L12: -0.9718 REMARK 3 L13: -0.1730 L23: 1.7877 REMARK 3 S TENSOR REMARK 3 S11: 0.4058 S12: 0.4085 S13: -0.3109 REMARK 3 S21: 0.0438 S22: -0.0490 S23: -0.0126 REMARK 3 S31: -0.4450 S32: 0.1176 S33: -0.0700 REMARK 3 TLS GROUP : 30 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 151 THROUGH 172 ) REMARK 3 ORIGIN FOR THE GROUP (A): 76.8901 105.7550-172.1330 REMARK 3 T TENSOR REMARK 3 T11: 0.1495 T22: 0.8909 REMARK 3 T33: 0.6432 T12: 0.4964 REMARK 3 T13: -0.0993 T23: 0.1347 REMARK 3 L TENSOR REMARK 3 L11: 0.6428 L22: 0.6040 REMARK 3 L33: 0.6442 L12: -0.2855 REMARK 3 L13: 0.2675 L23: -0.2697 REMARK 3 S TENSOR REMARK 3 S11: 0.0860 S12: 0.0944 S13: 0.2562 REMARK 3 S21: -0.1823 S22: 0.0378 S23: 0.1745 REMARK 3 S31: 0.1023 S32: 0.2358 S33: 0.3393 REMARK 3 TLS GROUP : 31 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 173 THROUGH 187 ) REMARK 3 ORIGIN FOR THE GROUP (A): 77.5211 95.9608-179.5895 REMARK 3 T TENSOR REMARK 3 T11: 0.2188 T22: 0.3513 REMARK 3 T33: 0.3183 T12: 0.0208 REMARK 3 T13: 0.1905 T23: -0.0185 REMARK 3 L TENSOR REMARK 3 L11: 2.3369 L22: 1.2657 REMARK 3 L33: 2.4336 L12: 0.6826 REMARK 3 L13: -0.6807 L23: -0.0136 REMARK 3 S TENSOR REMARK 3 S11: 0.1485 S12: 0.3306 S13: 0.1445 REMARK 3 S21: -0.1052 S22: -0.4219 S23: 0.2568 REMARK 3 S31: -0.1336 S32: -0.1929 S33: 0.0623 REMARK 3 TLS GROUP : 32 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 188 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): 76.6561 89.9703-172.5019 REMARK 3 T TENSOR REMARK 3 T11: 0.1812 T22: 0.5906 REMARK 3 T33: 0.4520 T12: -0.2117 REMARK 3 T13: 0.0025 T23: -0.2514 REMARK 3 L TENSOR REMARK 3 L11: 2.0066 L22: 2.2468 REMARK 3 L33: 3.5669 L12: -1.6671 REMARK 3 L13: -0.7797 L23: 0.8943 REMARK 3 S TENSOR REMARK 3 S11: 0.3327 S12: -0.0584 S13: -0.6042 REMARK 3 S21: -0.1976 S22: 0.4666 S23: -0.3120 REMARK 3 S31: 0.1327 S32: 0.3050 S33: -0.2618 REMARK 3 TLS GROUP : 33 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 198 THROUGH 211 ) REMARK 3 ORIGIN FOR THE GROUP (A): 72.4627 95.7952-165.6845 REMARK 3 T TENSOR REMARK 3 T11: 0.4533 T22: 0.8067 REMARK 3 T33: 0.4672 T12: 0.2289 REMARK 3 T13: 0.0779 T23: 0.2042 REMARK 3 L TENSOR REMARK 3 L11: 1.8297 L22: 1.4031 REMARK 3 L33: 3.2409 L12: -0.6316 REMARK 3 L13: -0.8893 L23: 0.1771 REMARK 3 S TENSOR REMARK 3 S11: -0.0308 S12: -0.7414 S13: -0.2182 REMARK 3 S21: 0.2391 S22: 0.1669 S23: 0.0757 REMARK 3 S31: -0.3668 S32: -0.0946 S33: -0.0367 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8F2X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-NOV-22. REMARK 100 THE DEPOSITION ID IS D_1000269914. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAR-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16572 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.1 REMARK 200 DATA REDUNDANCY : 2.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.20000 REMARK 200 FOR THE DATA SET : 5.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.69 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7CZU, 7N4J REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.12 M ALCOHOL MIXTURE (1,6 REMARK 280 -HEXANEDIOL; 1-BUTANOL; 1,2-PROPANEDIOL; 2-PROPANOL; 1,4- REMARK 280 BUTANEDIOL; 1,3-PROPANEDIOL), 0.1M BUFFER SYSTEM 3 (TRIS BASE REMARK 280 AND BICINE, PH 8.5), 50% PRECIPITANT MIX 4 (25% V/V MPD; 25% PEG REMARK 280 1000; 25% W/V PEG 3350) AND 0.1 M MANGANESE(II) CHLORIDE REMARK 280 TETRAHYDRATE., VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,-Y,-Z+1/2 REMARK 290 4555 -X+1/2,-Y,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 19.64500 REMARK 290 SMTRY2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 100.65500 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 19.64500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 100.65500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, H, L, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 331 REMARK 465 ILE A 332 REMARK 465 HIS A 530 REMARK 465 HIS A 531 REMARK 465 HIS A 532 REMARK 465 HIS A 533 REMARK 465 HIS A 534 REMARK 465 HIS A 535 REMARK 465 LYS H 143 REMARK 465 SER H 144 REMARK 465 THR H 145 REMARK 465 SER H 146 REMARK 465 GLY H 147 REMARK 465 GLY H 148 REMARK 465 SER H 229 REMARK 465 CYS H 230 REMARK 465 ASP H 231 REMARK 465 LYS H 232 REMARK 465 ASP L 1 REMARK 465 GLY L 212 REMARK 465 GLU L 213 REMARK 465 CYS L 214 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 393 CG2 REMARK 470 VAL A 503 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN H 169 N ILE H 209 1.63 REMARK 500 OD2 ASP L 105 OH TYR L 173 1.64 REMARK 500 CG2 THR H 91 OG1 THR H 124 1.85 REMARK 500 CG1 VAL H 11 CG1 VAL H 125 2.12 REMARK 500 CG2 VAL H 125 CE1 PHE H 160 2.13 REMARK 500 OE1 GLN A 409 OH TYR L 32 2.17 REMARK 500 CB SER L 30 NE2 GLN L 90 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 341 -53.05 -120.75 REMARK 500 ASN A 370 52.09 -92.53 REMARK 500 ASP A 428 32.27 -96.99 REMARK 500 ARG A 457 142.66 -170.65 REMARK 500 ASN A 481 52.97 -93.50 REMARK 500 THR A 500 59.75 -95.79 REMARK 500 LEU H 18 119.11 -162.07 REMARK 500 VAL H 48 -63.08 -120.37 REMARK 500 SER H 52 -169.75 -76.93 REMARK 500 SER H 63 -1.18 63.14 REMARK 500 SER H 85 72.53 54.89 REMARK 500 ASP H 90 3.90 -65.99 REMARK 500 VAL H 103 -64.32 -93.49 REMARK 500 MET H 105 -155.00 -79.75 REMARK 500 VAL H 106 128.45 -34.95 REMARK 500 PRO H 163 80.55 -67.77 REMARK 500 ASN H 169 76.93 40.84 REMARK 500 SER L 12 119.31 -161.10 REMARK 500 GLN L 27 155.25 -46.92 REMARK 500 ASP L 28 71.10 60.53 REMARK 500 ILE L 29 129.54 -39.77 REMARK 500 TYR L 32 67.08 66.81 REMARK 500 TYR L 49 -159.62 -77.40 REMARK 500 ASP L 50 87.37 -66.86 REMARK 500 ALA L 51 -4.58 71.83 REMARK 500 SER L 52 -171.89 -170.64 REMARK 500 ASN L 53 67.45 60.40 REMARK 500 GLU L 81 58.00 -94.44 REMARK 500 PRO L 95 80.64 -69.76 REMARK 500 REMARK 500 REMARK: NULL DBREF 8F2X A 331 527 UNP P0DTC2 SPIKE_SARS2 331 527 DBREF 8F2X H 1 232 PDB 8F2X 8F2X 1 232 DBREF 8F2X L 1 214 PDB 8F2X 8F2X 1 214 SEQADV 8F2X GLY A 528 UNP P0DTC2 EXPRESSION TAG SEQADV 8F2X SER A 529 UNP P0DTC2 EXPRESSION TAG SEQADV 8F2X HIS A 530 UNP P0DTC2 EXPRESSION TAG SEQADV 8F2X HIS A 531 UNP P0DTC2 EXPRESSION TAG SEQADV 8F2X HIS A 532 UNP P0DTC2 EXPRESSION TAG SEQADV 8F2X HIS A 533 UNP P0DTC2 EXPRESSION TAG SEQADV 8F2X HIS A 534 UNP P0DTC2 EXPRESSION TAG SEQADV 8F2X HIS A 535 UNP P0DTC2 EXPRESSION TAG SEQRES 1 A 205 ASN ILE THR ASN LEU CYS PRO PHE GLY GLU VAL PHE ASN SEQRES 2 A 205 ALA THR ARG PHE ALA SER VAL TYR ALA TRP ASN ARG LYS SEQRES 3 A 205 ARG ILE SER ASN CYS VAL ALA ASP TYR SER VAL LEU TYR SEQRES 4 A 205 ASN SER ALA SER PHE SER THR PHE LYS CYS TYR GLY VAL SEQRES 5 A 205 SER PRO THR LYS LEU ASN ASP LEU CYS PHE THR ASN VAL SEQRES 6 A 205 TYR ALA ASP SER PHE VAL ILE ARG GLY ASP GLU VAL ARG SEQRES 7 A 205 GLN ILE ALA PRO GLY GLN THR GLY LYS ILE ALA ASP TYR SEQRES 8 A 205 ASN TYR LYS LEU PRO ASP ASP PHE THR GLY CYS VAL ILE SEQRES 9 A 205 ALA TRP ASN SER ASN ASN LEU ASP SER LYS VAL GLY GLY SEQRES 10 A 205 ASN TYR ASN TYR LEU TYR ARG LEU PHE ARG LYS SER ASN SEQRES 11 A 205 LEU LYS PRO PHE GLU ARG ASP ILE SER THR GLU ILE TYR SEQRES 12 A 205 GLN ALA GLY SER THR PRO CYS ASN GLY VAL GLU GLY PHE SEQRES 13 A 205 ASN CYS TYR PHE PRO LEU GLN SER TYR GLY PHE GLN PRO SEQRES 14 A 205 THR ASN GLY VAL GLY TYR GLN PRO TYR ARG VAL VAL VAL SEQRES 15 A 205 LEU SER PHE GLU LEU LEU HIS ALA PRO ALA THR VAL CYS SEQRES 16 A 205 GLY PRO GLY SER HIS HIS HIS HIS HIS HIS SEQRES 1 H 232 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY VAL VAL GLN SEQRES 2 H 232 PRO GLY ARG SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 232 PHE THR PHE SER SER TYR ALA MET HIS TRP VAL ARG GLN SEQRES 4 H 232 ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA VAL LEU SER SEQRES 5 H 232 TYR ASP GLY SER ASN LYS TYR ASN ALA ASP SER VAL LYS SEQRES 6 H 232 GLY ARG PHE THR ILE SER ARG ASP ASN SER LYS ASN THR SEQRES 7 H 232 LEU TYR LEU GLN MET ASN SER LEU ARG VAL GLU ASP THR SEQRES 8 H 232 ALA MET TYR TYR CYS ALA ARG ASP GLY VAL SER VAL THR SEQRES 9 H 232 MET VAL ARG GLY VAL ILE GLY PRO LEU CYS ASP TYR TRP SEQRES 10 H 232 GLY GLN GLY THR LEU VAL THR VAL SER SER ALA SER THR SEQRES 11 H 232 LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SEQRES 12 H 232 SER THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL SEQRES 13 H 232 LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SEQRES 14 H 232 SER GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA SEQRES 15 H 232 VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SER VAL SEQRES 16 H 232 VAL THR VAL PRO SER SER SER LEU GLY THR GLN THR TYR SEQRES 17 H 232 ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL SEQRES 18 H 232 ASP LYS ARG VAL GLU PRO LYS SER CYS ASP LYS SEQRES 1 L 214 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 L 214 SER VAL GLY ASP ARG VAL THR ILE THR CYS GLN THR SER SEQRES 3 L 214 GLN ASP ILE SER ASN TYR LEU ASN TRP TYR GLN GLN LYS SEQRES 4 L 214 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR ASP ALA SER SEQRES 5 L 214 ASN LEU GLU THR GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 214 GLY SER GLY THR ASP PHE THR PHE THR ILE SER SER LEU SEQRES 7 L 214 GLN PRO GLU ASP ILE ALA THR TYR TYR CYS GLN GLN TYR SEQRES 8 L 214 ASP ASN LEU PRO LEU THR PHE GLY GLY GLY THR LYS VAL SEQRES 9 L 214 ASP ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 L 214 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 L 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 L 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 L 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 L 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 L 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 L 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 L 214 PHE ASN ARG GLY GLU CYS HET NAG B 1 14 HET NAG B 2 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 4 NAG 2(C8 H15 N O6) HELIX 1 AA1 PHE A 338 ASN A 343 1 6 HELIX 2 AA2 TYR A 365 ASN A 370 1 6 HELIX 3 AA3 THR A 385 ASP A 389 5 5 HELIX 4 AA4 ASP A 405 ILE A 410 5 6 HELIX 5 AA5 LYS A 417 ASN A 422 1 6 HELIX 6 AA6 GLY A 502 TYR A 505 5 4 HELIX 7 AA7 ARG H 87 THR H 91 5 5 HELIX 8 AA8 PRO H 199 LEU H 203 5 5 HELIX 9 AA9 GLN L 79 ILE L 83 5 5 HELIX 10 AB1 SER L 121 LYS L 126 1 6 HELIX 11 AB2 LYS L 183 LYS L 188 1 6 SHEET 1 AA1 5 ASN A 354 ILE A 358 0 SHEET 2 AA1 5 ASN A 394 ARG A 403 -1 O VAL A 395 N ILE A 358 SHEET 3 AA1 5 PRO A 507 GLU A 516 -1 O SER A 514 N TYR A 396 SHEET 4 AA1 5 GLY A 431 ASN A 437 -1 N ILE A 434 O VAL A 511 SHEET 5 AA1 5 THR A 376 TYR A 380 -1 N TYR A 380 O GLY A 431 SHEET 1 AA2 3 CYS A 361 VAL A 362 0 SHEET 2 AA2 3 VAL A 524 CYS A 525 1 O CYS A 525 N CYS A 361 SHEET 3 AA2 3 CYS A 391 PHE A 392 -1 N PHE A 392 O VAL A 524 SHEET 1 AA3 2 LEU A 452 ARG A 454 0 SHEET 2 AA3 2 LEU A 492 SER A 494 -1 O GLN A 493 N TYR A 453 SHEET 1 AA4 2 TYR A 473 GLN A 474 0 SHEET 2 AA4 2 CYS A 488 TYR A 489 -1 O TYR A 489 N TYR A 473 SHEET 1 AA5 4 VAL H 5 GLU H 6 0 SHEET 2 AA5 4 LEU H 20 ALA H 23 -1 O ALA H 23 N VAL H 5 SHEET 3 AA5 4 THR H 78 MET H 83 -1 O LEU H 79 N CYS H 22 SHEET 4 AA5 4 PHE H 68 ASP H 73 -1 N SER H 71 O TYR H 80 SHEET 1 AA6 4 LEU H 45 LEU H 51 0 SHEET 2 AA6 4 ALA H 33 GLN H 39 -1 N ARG H 38 O GLU H 46 SHEET 3 AA6 4 ALA H 92 ASP H 99 -1 O TYR H 95 N VAL H 37 SHEET 4 AA6 4 THR H 121 LEU H 122 -1 O LEU H 122 N ALA H 92 SHEET 1 AA7 4 SER H 134 LEU H 138 0 SHEET 2 AA7 4 ALA H 150 TYR H 159 -1 O LEU H 155 N PHE H 136 SHEET 3 AA7 4 TYR H 190 VAL H 198 -1 O LEU H 192 N VAL H 156 SHEET 4 AA7 4 VAL H 177 THR H 179 -1 N HIS H 178 O VAL H 195 SHEET 1 AA8 4 SER H 134 LEU H 138 0 SHEET 2 AA8 4 ALA H 150 TYR H 159 -1 O LEU H 155 N PHE H 136 SHEET 3 AA8 4 TYR H 190 VAL H 198 -1 O LEU H 192 N VAL H 156 SHEET 4 AA8 4 VAL H 183 LEU H 184 -1 N VAL H 183 O SER H 191 SHEET 1 AA9 3 VAL H 164 TRP H 168 0 SHEET 2 AA9 3 ILE H 209 HIS H 214 -1 O ASN H 211 N SER H 167 SHEET 3 AA9 3 THR H 219 ARG H 224 -1 O LYS H 223 N CYS H 210 SHEET 1 AB1 2 ALA L 13 SER L 14 0 SHEET 2 AB1 2 ILE L 106 LYS L 107 1 O LYS L 107 N ALA L 13 SHEET 1 AB2 3 ARG L 18 ILE L 21 0 SHEET 2 AB2 3 ASP L 70 SER L 76 -1 O ILE L 75 N VAL L 19 SHEET 3 AB2 3 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AB3 4 LYS L 45 ILE L 48 0 SHEET 2 AB3 4 ASN L 34 GLN L 38 -1 N TRP L 35 O LEU L 47 SHEET 3 AB3 4 THR L 85 GLN L 89 -1 O TYR L 87 N TYR L 36 SHEET 4 AB3 4 THR L 102 LYS L 103 -1 O THR L 102 N TYR L 86 SHEET 1 AB4 4 SER L 114 PHE L 118 0 SHEET 2 AB4 4 THR L 129 PHE L 139 -1 O LEU L 135 N PHE L 116 SHEET 3 AB4 4 TYR L 173 SER L 182 -1 O TYR L 173 N PHE L 139 SHEET 4 AB4 4 SER L 159 VAL L 163 -1 N GLN L 160 O THR L 178 SHEET 1 AB5 3 LYS L 145 VAL L 150 0 SHEET 2 AB5 3 VAL L 191 THR L 197 -1 O THR L 197 N LYS L 145 SHEET 3 AB5 3 VAL L 205 ASN L 210 -1 O PHE L 209 N TYR L 192 SSBOND 1 CYS A 336 CYS A 361 1555 1555 2.03 SSBOND 2 CYS A 379 CYS A 432 1555 1555 2.03 SSBOND 3 CYS A 391 CYS A 525 1555 1555 2.03 SSBOND 4 CYS A 480 CYS A 488 1555 1555 2.03 SSBOND 5 CYS H 22 CYS H 96 1555 1555 2.03 SSBOND 6 CYS H 154 CYS H 210 1555 1555 2.03 SSBOND 7 CYS L 23 CYS L 88 1555 1555 2.04 SSBOND 8 CYS L 134 CYS L 194 1555 1555 2.03 LINK ND2 ASN A 343 C1 NAG B 1 1555 1555 1.44 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.44 CISPEP 1 PHE H 160 PRO H 161 0 3.09 CISPEP 2 TYR L 140 PRO L 141 0 0.60 CRYST1 39.290 94.430 201.310 90.00 90.00 90.00 P 21 2 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025452 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010590 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004967 0.00000