HEADER HYDROLASE/HYDROLASE INHIBITOR 20-NOV-22 8F7V TITLE MACROCYCLIC PLASMIN INHIBITOR CAVEAT 8F7V RESIDUES ARG B 561 AND VAL B 562 THAT ARE NEXT TO EACH OTHER CAVEAT 2 8F7V IN THE SAMPLE SEQUENCE ARE NOT PROPERLY LINKED: DISTANCE CAVEAT 3 8F7V BETWEEN C AND N IS 19.20 RESIDUES ARG B 712 AND TYR B 713 CAVEAT 4 8F7V THAT ARE NEXT TO EACH OTHER IN THE SAMPLE SEQUENCE ARE NOT CAVEAT 5 8F7V PROPERLY LINKED: DISTANCE BETWEEN C AND N IS 1.14 THE CAVEAT 6 8F7V DISTANCE BETWEEN RESIDUE A GLY 560 AND RESIDUE A VAL 562 IS CAVEAT 7 8F7V 15.85 ANGSTROM. BUT THERE IS ONLY 1 RESIDUE (NOT ENOUGH CAVEAT 8 8F7V SEQUENCE) TO COVER THE GAP REGION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PLASMINOGEN; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.4.21.7; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PLG; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS PROTEASE, INHIBITOR, HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR W.GUOJIE REVDAT 2 21-JUN-23 8F7V 1 SPRSDE REVDAT 1 08-FEB-23 8F7V 0 SPRSDE 21-JUN-23 8F7V 7T52 JRNL AUTH W.GUOJIE JRNL TITL SYNTHESIS AND STRUCTURAL CHARACTERIZATION OF NEW JRNL TITL 2 MACROCYCLICPLASMIN INHIBITORS JRNL REF CHEMMEDCHEM 2023 JRNL REFN ESSN 1860-7187 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 53572 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.187 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 2703 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.6000 - 4.4000 1.00 2764 158 0.1690 0.1556 REMARK 3 2 4.4000 - 3.4900 1.00 2720 128 0.1436 0.1471 REMARK 3 3 3.4900 - 3.0500 1.00 2681 172 0.1665 0.2032 REMARK 3 4 3.0500 - 2.7700 1.00 2717 129 0.1743 0.1895 REMARK 3 5 2.7700 - 2.5700 1.00 2668 146 0.1838 0.2049 REMARK 3 6 2.5700 - 2.4200 1.00 2687 116 0.1775 0.1972 REMARK 3 7 2.4200 - 2.3000 1.00 2685 151 0.1747 0.1911 REMARK 3 8 2.3000 - 2.2000 1.00 2682 151 0.1692 0.1719 REMARK 3 9 2.2000 - 2.1200 1.00 2669 111 0.1664 0.1730 REMARK 3 10 2.1200 - 2.0400 1.00 2681 156 0.1842 0.2033 REMARK 3 11 2.0400 - 1.9800 1.00 2660 150 0.1851 0.1955 REMARK 3 12 1.9800 - 1.9200 1.00 2657 134 0.1731 0.1909 REMARK 3 13 1.9200 - 1.8700 1.00 2634 163 0.1752 0.2130 REMARK 3 14 1.8700 - 1.8300 1.00 2654 155 0.1856 0.2044 REMARK 3 15 1.8300 - 1.7900 0.99 2609 153 0.1971 0.2316 REMARK 3 16 1.7900 - 1.7500 1.00 2623 150 0.1996 0.2220 REMARK 3 17 1.7500 - 1.7100 1.00 2707 133 0.2154 0.2211 REMARK 3 18 1.7100 - 1.6800 1.00 2644 115 0.2300 0.2317 REMARK 3 19 1.6800 - 1.6500 1.00 2727 132 0.2433 0.2490 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.780 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.24 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 547 THROUGH 600 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.9479 -26.1316 34.8258 REMARK 3 T TENSOR REMARK 3 T11: 0.1471 T22: 0.2826 REMARK 3 T33: 0.2997 T12: -0.0221 REMARK 3 T13: 0.0115 T23: -0.0096 REMARK 3 L TENSOR REMARK 3 L11: 2.4934 L22: 3.2711 REMARK 3 L33: 1.4968 L12: 0.0121 REMARK 3 L13: 0.5473 L23: 0.9907 REMARK 3 S TENSOR REMARK 3 S11: 0.0121 S12: -0.0829 S13: 0.0633 REMARK 3 S21: -0.0394 S22: 0.0686 S23: -0.6671 REMARK 3 S31: -0.1075 S32: 0.4175 S33: -0.0353 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 601 THROUGH 640 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.7798 -27.7373 22.2645 REMARK 3 T TENSOR REMARK 3 T11: 0.3416 T22: 0.3201 REMARK 3 T33: 0.3036 T12: -0.0327 REMARK 3 T13: 0.1208 T23: -0.0092 REMARK 3 L TENSOR REMARK 3 L11: 4.4846 L22: 2.2992 REMARK 3 L33: 2.6098 L12: 0.0245 REMARK 3 L13: -0.0060 L23: 0.2233 REMARK 3 S TENSOR REMARK 3 S11: -0.1137 S12: 0.3315 S13: 0.3947 REMARK 3 S21: -0.5605 S22: 0.1170 S23: -0.5996 REMARK 3 S31: -0.3826 S32: 0.5029 S33: -0.0022 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 641 THROUGH 684 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.5964 -32.0615 35.2334 REMARK 3 T TENSOR REMARK 3 T11: 0.1186 T22: 0.1374 REMARK 3 T33: 0.1898 T12: 0.0091 REMARK 3 T13: 0.0043 T23: -0.0139 REMARK 3 L TENSOR REMARK 3 L11: 1.9435 L22: 1.5459 REMARK 3 L33: 1.3563 L12: -0.0234 REMARK 3 L13: -0.3101 L23: -0.0175 REMARK 3 S TENSOR REMARK 3 S11: 0.0125 S12: -0.0899 S13: -0.1758 REMARK 3 S21: 0.0169 S22: 0.0276 S23: -0.2397 REMARK 3 S31: 0.0557 S32: 0.2355 S33: -0.0217 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 685 THROUGH 697 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.3518 -12.2184 32.7558 REMARK 3 T TENSOR REMARK 3 T11: 0.7290 T22: 0.4308 REMARK 3 T33: 0.6072 T12: -0.0907 REMARK 3 T13: -0.0016 T23: -0.0704 REMARK 3 L TENSOR REMARK 3 L11: 8.4890 L22: 4.8457 REMARK 3 L33: 8.0676 L12: 2.2032 REMARK 3 L13: 1.3397 L23: 0.7295 REMARK 3 S TENSOR REMARK 3 S11: -0.2633 S12: -0.4234 S13: 1.7921 REMARK 3 S21: -0.5621 S22: 0.3400 S23: -0.4947 REMARK 3 S31: -2.1945 S32: -0.1151 S33: -0.0518 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 698 THROUGH 743 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.6601 -19.1708 39.6628 REMARK 3 T TENSOR REMARK 3 T11: 0.1914 T22: 0.1315 REMARK 3 T33: 0.0943 T12: -0.0010 REMARK 3 T13: -0.0246 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 5.7921 L22: 2.3681 REMARK 3 L33: 0.6884 L12: -1.1311 REMARK 3 L13: -0.5850 L23: 0.6693 REMARK 3 S TENSOR REMARK 3 S11: -0.1004 S12: -0.2523 S13: 0.1949 REMARK 3 S21: 0.0558 S22: 0.0523 S23: -0.0249 REMARK 3 S31: -0.1052 S32: 0.0806 S33: 0.0505 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 744 THROUGH 791 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.2555 -29.6877 36.7147 REMARK 3 T TENSOR REMARK 3 T11: 0.0931 T22: 0.1188 REMARK 3 T33: 0.0955 T12: 0.0033 REMARK 3 T13: -0.0088 T23: 0.0177 REMARK 3 L TENSOR REMARK 3 L11: 1.0647 L22: 1.6319 REMARK 3 L33: 1.7368 L12: 0.2070 REMARK 3 L13: 0.1698 L23: 0.6229 REMARK 3 S TENSOR REMARK 3 S11: 0.0171 S12: -0.0697 S13: -0.1101 REMARK 3 S21: 0.0586 S22: 0.0147 S23: -0.1209 REMARK 3 S31: 0.0542 S32: 0.1413 S33: -0.0284 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 542 THROUGH 618 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.2887 -3.7918 14.2171 REMARK 3 T TENSOR REMARK 3 T11: 0.0954 T22: 0.0995 REMARK 3 T33: 0.0885 T12: 0.0105 REMARK 3 T13: 0.0016 T23: 0.0044 REMARK 3 L TENSOR REMARK 3 L11: 0.6847 L22: 1.1176 REMARK 3 L33: 0.9904 L12: -0.0777 REMARK 3 L13: 0.0019 L23: 0.6778 REMARK 3 S TENSOR REMARK 3 S11: -0.0154 S12: -0.0531 S13: 0.0148 REMARK 3 S21: 0.0987 S22: 0.0193 S23: -0.0058 REMARK 3 S31: 0.0951 S32: 0.0244 S33: 0.0074 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 619 THROUGH 640 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.5334 -1.5471 20.2382 REMARK 3 T TENSOR REMARK 3 T11: 0.1082 T22: 0.1006 REMARK 3 T33: 0.0655 T12: -0.0049 REMARK 3 T13: -0.0297 T23: 0.0111 REMARK 3 L TENSOR REMARK 3 L11: 3.9603 L22: 3.2717 REMARK 3 L33: 3.0802 L12: -0.4302 REMARK 3 L13: -0.3231 L23: 0.8426 REMARK 3 S TENSOR REMARK 3 S11: 0.0589 S12: -0.1116 S13: 0.1530 REMARK 3 S21: 0.0924 S22: 0.1008 S23: -0.4616 REMARK 3 S31: 0.1113 S32: 0.2673 S33: -0.1075 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 641 THROUGH 697 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.0361 -1.4822 10.1226 REMARK 3 T TENSOR REMARK 3 T11: 0.1112 T22: 0.0886 REMARK 3 T33: 0.0765 T12: 0.0013 REMARK 3 T13: 0.0100 T23: -0.0026 REMARK 3 L TENSOR REMARK 3 L11: 2.3521 L22: 1.2560 REMARK 3 L33: 1.0399 L12: -0.1497 REMARK 3 L13: 0.6042 L23: 0.1265 REMARK 3 S TENSOR REMARK 3 S11: 0.0530 S12: 0.0269 S13: 0.0213 REMARK 3 S21: -0.0121 S22: -0.0227 S23: 0.0710 REMARK 3 S31: 0.0544 S32: -0.0167 S33: -0.0221 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 698 THROUGH 791 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.0540 -6.0457 7.5087 REMARK 3 T TENSOR REMARK 3 T11: 0.0982 T22: 0.1097 REMARK 3 T33: 0.1156 T12: 0.0074 REMARK 3 T13: 0.0061 T23: -0.0107 REMARK 3 L TENSOR REMARK 3 L11: 0.8773 L22: 1.6543 REMARK 3 L33: 0.7127 L12: 0.5670 REMARK 3 L13: 0.5307 L23: 0.1464 REMARK 3 S TENSOR REMARK 3 S11: 0.0199 S12: -0.0057 S13: 0.0577 REMARK 3 S21: 0.0340 S22: -0.0583 S23: 0.1225 REMARK 3 S31: 0.0283 S32: -0.0813 S33: 0.0472 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8F7V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-NOV-22. REMARK 100 THE DEPOSITION ID IS D_1000270158. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-APR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5-5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.22 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53677 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 91.870 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09800 REMARK 200 FOR THE DATA SET : 9.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : 0.52300 REMARK 200 R SYM FOR SHELL (I) : 0.52300 REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 13-18% PEG 4000, 150 MM AMMONIUM REMARK 280 SULFATE, 100 MM MES, PH 5.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 25.09650 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 542 REMARK 465 ALA A 543 REMARK 465 PRO A 544 REMARK 465 SER A 545 REMARK 465 PHE A 546 REMARK 465 ARG A 561 REMARK 465 ARG A 582 REMARK 465 PHE A 583 REMARK 465 ASN B 625 REMARK 465 LEU B 626 REMARK 465 GLU B 627 REMARK 465 GLN B 689 REMARK 465 GLY B 690 REMARK 465 THR B 691 REMARK 465 PHE B 692 REMARK 465 GLY B 693 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLY A 560 CA C O REMARK 470 THR A 691 CB OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG B 712 C TYR B 713 N -0.193 REMARK 500 GLY B 772 C GLY B 772 O -0.097 REMARK 500 MET B 788 N MET B 788 CA 0.198 REMARK 500 MET B 788 N MET B 788 CA 0.200 REMARK 500 MET B 788 CA MET B 788 C 0.167 REMARK 500 MET B 788 CA MET B 788 C 0.163 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 712 NE - CZ - NH2 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG B 712 CA - C - N ANGL. DEV. = 20.1 DEGREES REMARK 500 ARG B 712 CA - C - N ANGL. DEV. = 16.0 DEGREES REMARK 500 ARG B 712 O - C - N ANGL. DEV. = -13.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 621 -53.43 -127.20 REMARK 500 VAL A 624 -74.88 -82.03 REMARK 500 HIS A 629 12.46 -68.11 REMARK 500 PHE A 715 -103.29 -113.94 REMARK 500 LYS A 750 -67.16 70.22 REMARK 500 ASP A 751 12.53 -147.69 REMARK 500 PHE B 587 -13.33 -141.14 REMARK 500 HIS B 621 -51.75 -122.01 REMARK 500 ARG B 677 -0.61 78.52 REMARK 500 ARG B 712 152.10 -46.98 REMARK 500 PHE B 715 -104.96 -108.65 REMARK 500 LYS B 750 -65.02 67.88 REMARK 500 SER B 760 -62.35 -121.79 REMARK 500 REMARK 500 REMARK: NULL DBREF 8F7V A 542 791 UNP P00747 PLMN_HUMAN 561 810 DBREF 8F7V B 542 791 UNP P00747 PLMN_HUMAN 561 810 SEQADV 8F7V ALA A 741 UNP P00747 SER 760 ENGINEERED MUTATION SEQADV 8F7V ALA B 741 UNP P00747 SER 760 ENGINEERED MUTATION SEQRES 1 A 250 ALA ALA PRO SER PHE ASP CYS GLY LYS PRO GLN VAL GLU SEQRES 2 A 250 PRO LYS LYS CYS PRO GLY ARG VAL VAL GLY GLY CYS VAL SEQRES 3 A 250 ALA HIS PRO HIS SER TRP PRO TRP GLN VAL SER LEU ARG SEQRES 4 A 250 THR ARG PHE GLY MET HIS PHE CYS GLY GLY THR LEU ILE SEQRES 5 A 250 SER PRO GLU TRP VAL LEU THR ALA ALA HIS CYS LEU GLU SEQRES 6 A 250 LYS SER PRO ARG PRO SER SER TYR LYS VAL ILE LEU GLY SEQRES 7 A 250 ALA HIS GLN GLU VAL ASN LEU GLU PRO HIS VAL GLN GLU SEQRES 8 A 250 ILE GLU VAL SER ARG LEU PHE LEU GLU PRO THR ARG LYS SEQRES 9 A 250 ASP ILE ALA LEU LEU LYS LEU SER SER PRO ALA VAL ILE SEQRES 10 A 250 THR ASP LYS VAL ILE PRO ALA CYS LEU PRO SER PRO ASN SEQRES 11 A 250 TYR VAL VAL ALA ASP ARG THR GLU CYS PHE ILE THR GLY SEQRES 12 A 250 TRP GLY GLU THR GLN GLY THR PHE GLY ALA GLY LEU LEU SEQRES 13 A 250 LYS GLU ALA GLN LEU PRO VAL ILE GLU ASN LYS VAL CYS SEQRES 14 A 250 ASN ARG TYR GLU PHE LEU ASN GLY ARG VAL GLN SER THR SEQRES 15 A 250 GLU LEU CYS ALA GLY HIS LEU ALA GLY GLY THR ASP SER SEQRES 16 A 250 CYS GLN GLY ASP ALA GLY GLY PRO LEU VAL CYS PHE GLU SEQRES 17 A 250 LYS ASP LYS TYR ILE LEU GLN GLY VAL THR SER TRP GLY SEQRES 18 A 250 LEU GLY CYS ALA ARG PRO ASN LYS PRO GLY VAL TYR VAL SEQRES 19 A 250 ARG VAL SER ARG PHE VAL THR TRP ILE GLU GLY VAL MET SEQRES 20 A 250 ARG ASN ASN SEQRES 1 B 250 ALA ALA PRO SER PHE ASP CYS GLY LYS PRO GLN VAL GLU SEQRES 2 B 250 PRO LYS LYS CYS PRO GLY ARG VAL VAL GLY GLY CYS VAL SEQRES 3 B 250 ALA HIS PRO HIS SER TRP PRO TRP GLN VAL SER LEU ARG SEQRES 4 B 250 THR ARG PHE GLY MET HIS PHE CYS GLY GLY THR LEU ILE SEQRES 5 B 250 SER PRO GLU TRP VAL LEU THR ALA ALA HIS CYS LEU GLU SEQRES 6 B 250 LYS SER PRO ARG PRO SER SER TYR LYS VAL ILE LEU GLY SEQRES 7 B 250 ALA HIS GLN GLU VAL ASN LEU GLU PRO HIS VAL GLN GLU SEQRES 8 B 250 ILE GLU VAL SER ARG LEU PHE LEU GLU PRO THR ARG LYS SEQRES 9 B 250 ASP ILE ALA LEU LEU LYS LEU SER SER PRO ALA VAL ILE SEQRES 10 B 250 THR ASP LYS VAL ILE PRO ALA CYS LEU PRO SER PRO ASN SEQRES 11 B 250 TYR VAL VAL ALA ASP ARG THR GLU CYS PHE ILE THR GLY SEQRES 12 B 250 TRP GLY GLU THR GLN GLY THR PHE GLY ALA GLY LEU LEU SEQRES 13 B 250 LYS GLU ALA GLN LEU PRO VAL ILE GLU ASN LYS VAL CYS SEQRES 14 B 250 ASN ARG TYR GLU PHE LEU ASN GLY ARG VAL GLN SER THR SEQRES 15 B 250 GLU LEU CYS ALA GLY HIS LEU ALA GLY GLY THR ASP SER SEQRES 16 B 250 CYS GLN GLY ASP ALA GLY GLY PRO LEU VAL CYS PHE GLU SEQRES 17 B 250 LYS ASP LYS TYR ILE LEU GLN GLY VAL THR SER TRP GLY SEQRES 18 B 250 LEU GLY CYS ALA ARG PRO ASN LYS PRO GLY VAL TYR VAL SEQRES 19 B 250 ARG VAL SER ARG PHE VAL THR TRP ILE GLU GLY VAL MET SEQRES 20 B 250 ARG ASN ASN HET EUA A 801 107 HET SO4 A 802 5 HET SO4 A 803 5 HET SO4 A 804 5 HET EUA B 801 107 HET SO4 B 802 5 HET SO4 B 803 5 HET SO4 B 804 5 HET SO4 B 805 5 HET SO4 B 806 5 HET SO4 B 807 5 HET GOL B 808 6 HETNAM EUA (6S,9R,19S,22R)-N-{[4-(AMINOMETHYL)PHENYL]METHYL}-22- HETNAM 2 EUA [(BENZENESULFONYL)AMINO]-3,12,21-TRIOXO-2,6,9,13,20- HETNAM 3 EUA PENTAAZATETRACYCLO[22.2.2.2~6,9~.2~14,17~]DOTRIACONTA- HETNAM 4 EUA 1(26),14,16,24,27,29-HEXAENE-19-CARBOXAMIDE HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 EUA 2(C42 H50 N8 O6 S) FORMUL 4 SO4 9(O4 S 2-) FORMUL 14 GOL C3 H8 O3 FORMUL 15 HOH *377(H2 O) HELIX 1 AA1 ALA A 601 GLU A 606 5 6 HELIX 2 AA2 ARG A 610 SER A 613 5 4 HELIX 3 AA3 GLU A 706 ASN A 711 1 6 HELIX 4 AA4 PHE A 780 ASN A 791 1 12 HELIX 5 AA5 ALA B 601 GLU B 606 5 6 HELIX 6 AA6 ARG B 610 SER B 612 5 3 HELIX 7 AA7 GLU B 706 ASN B 711 1 6 HELIX 8 AA8 PHE B 780 ASN B 791 1 12 SHEET 1 AA1 8 CYS A 566 VAL A 567 0 SHEET 2 AA1 8 LYS A 698 ILE A 705 -1 O GLU A 699 N CYS A 566 SHEET 3 AA1 8 GLU A 724 ALA A 727 -1 O CYS A 726 N ILE A 705 SHEET 4 AA1 8 GLY A 772 ARG A 776 -1 O TYR A 774 N LEU A 725 SHEET 5 AA1 8 LYS A 752 TRP A 761 -1 N TRP A 761 O VAL A 773 SHEET 6 AA1 8 PRO A 744 GLU A 749 -1 N GLU A 749 O LYS A 752 SHEET 7 AA1 8 GLU A 679 GLY A 684 -1 N PHE A 681 O VAL A 746 SHEET 8 AA1 8 LYS A 698 ILE A 705 -1 O LEU A 702 N CYS A 680 SHEET 1 AA2 7 GLN A 576 ARG A 580 0 SHEET 2 AA2 7 HIS A 586 SER A 594 -1 O CYS A 588 N LEU A 579 SHEET 3 AA2 7 TRP A 597 THR A 600 -1 O LEU A 599 N THR A 591 SHEET 4 AA2 7 ALA A 648 LEU A 652 -1 O LEU A 650 N VAL A 598 SHEET 5 AA2 7 GLN A 631 LEU A 640 -1 N ARG A 637 O LYS A 651 SHEET 6 AA2 7 LYS A 615 LEU A 618 -1 N VAL A 616 O ILE A 633 SHEET 7 AA2 7 GLN A 576 ARG A 580 -1 N SER A 578 O ILE A 617 SHEET 1 AA3 8 CYS B 566 VAL B 567 0 SHEET 2 AA3 8 LYS B 698 ILE B 705 -1 O GLU B 699 N CYS B 566 SHEET 3 AA3 8 GLU B 724 ALA B 727 -1 O CYS B 726 N ILE B 705 SHEET 4 AA3 8 GLY B 772 ARG B 776 -1 O TYR B 774 N LEU B 725 SHEET 5 AA3 8 LYS B 752 TRP B 761 -1 N TRP B 761 O VAL B 773 SHEET 6 AA3 8 PRO B 744 GLU B 749 -1 N GLU B 749 O LYS B 752 SHEET 7 AA3 8 GLU B 679 GLY B 684 -1 N PHE B 681 O VAL B 746 SHEET 8 AA3 8 LYS B 698 ILE B 705 -1 O LEU B 702 N CYS B 680 SHEET 1 AA4 7 GLN B 576 THR B 581 0 SHEET 2 AA4 7 HIS B 586 SER B 594 -1 O CYS B 588 N LEU B 579 SHEET 3 AA4 7 TRP B 597 THR B 600 -1 O LEU B 599 N THR B 591 SHEET 4 AA4 7 ALA B 648 LEU B 652 -1 O ALA B 648 N THR B 600 SHEET 5 AA4 7 GLN B 631 LEU B 640 -1 N SER B 636 O LYS B 651 SHEET 6 AA4 7 TYR B 614 LEU B 618 -1 N LEU B 618 O GLN B 631 SHEET 7 AA4 7 GLN B 576 THR B 581 -1 N ARG B 580 O LYS B 615 SSBOND 1 CYS A 548 CYS A 666 1555 1555 2.08 SSBOND 2 CYS A 558 CYS A 566 1555 1555 2.05 SSBOND 3 CYS A 588 CYS A 604 1555 1555 2.04 SSBOND 4 CYS A 680 CYS A 747 1555 1555 2.07 SSBOND 5 CYS A 710 CYS A 726 1555 1555 2.06 SSBOND 6 CYS A 737 CYS A 765 1555 1555 2.17 SSBOND 7 CYS B 548 CYS B 666 1555 1555 2.10 SSBOND 8 CYS B 558 CYS B 566 1555 1555 2.27 SSBOND 9 CYS B 588 CYS B 604 1555 1555 2.19 SSBOND 10 CYS B 680 CYS B 747 1555 1555 2.11 SSBOND 11 CYS B 710 CYS B 726 1555 1555 2.13 SSBOND 12 CYS B 737 CYS B 765 1555 1555 2.13 CRYST1 48.678 50.193 92.024 90.00 93.31 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020543 0.000000 0.001189 0.00000 SCALE2 0.000000 0.019923 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010885 0.00000