HEADER TRANSCRIPTION 21-DEC-22 8FKG TITLE CRYSTAL STRUCTURE OF PPARGAMMA LIGAND-BINDING DOMAIN IN COMPLEX WITH TITLE 2 N-COR PEPTIDE AND INVERSE AGONIST SR33486 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEAR RECEPTOR COREPRESSOR 1; COMPND 3 CHAIN: D; COMPND 4 SYNONYM: N-COR,N-COR1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA; COMPND 8 CHAIN: A; COMPND 9 SYNONYM: PPAR-GAMMA,NUCLEAR RECEPTOR SUBFAMILY 1 GROUP C MEMBER 3; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NCOR1, KIAA1047; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: PPARG, NR1C3; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEAR RECEPTORS, TZDS, DRUG DESIGN, THERAPEUTIC TARGETS, KEYWDS 2 TRANSCRIPTION, TRANSCRIPTION-AGONIST COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR B.S.MACTAVISH,D.J.KOJETIN REVDAT 1 17-APR-24 8FKG 0 JRNL AUTH B.S.MACTAVISH,D.J.KOJETIN JRNL TITL CRYSTAL STRUCTURE OF PPARGAMMA LIGAND-BINDING DOMAIN IN JRNL TITL 2 COMPLEX WITH N-COR PEPTIDE AND SR33486 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.12 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1-4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.12 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 18916 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 965 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.9800 - 4.0500 1.00 2769 136 0.1792 0.1926 REMARK 3 2 4.0500 - 3.2200 1.00 2598 133 0.1673 0.2061 REMARK 3 3 3.2200 - 2.8100 1.00 2538 141 0.1959 0.2203 REMARK 3 4 2.8100 - 2.5500 1.00 2549 129 0.1878 0.2348 REMARK 3 5 2.5500 - 2.3700 1.00 2512 132 0.2046 0.2556 REMARK 3 6 2.3700 - 2.2300 1.00 2486 138 0.2006 0.2436 REMARK 3 7 2.2300 - 2.1200 1.00 2497 156 0.2242 0.2868 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.221 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.374 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.87 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2307 REMARK 3 ANGLE : 0.467 3087 REMARK 3 CHIRALITY : 0.036 353 REMARK 3 PLANARITY : 0.004 388 REMARK 3 DIHEDRAL : 11.183 889 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN D AND RESID 2260:2271 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.533 18.902 7.610 REMARK 3 T TENSOR REMARK 3 T11: 0.2092 T22: 0.6788 REMARK 3 T33: 0.7413 T12: 0.1033 REMARK 3 T13: -0.0874 T23: -0.0948 REMARK 3 L TENSOR REMARK 3 L11: 7.0823 L22: 3.8369 REMARK 3 L33: 6.7194 L12: -1.4365 REMARK 3 L13: 0.3762 L23: -4.5006 REMARK 3 S TENSOR REMARK 3 S11: 0.6757 S12: 0.3186 S13: -0.3243 REMARK 3 S21: -0.4448 S22: -0.0175 S23: 1.3719 REMARK 3 S31: 0.2183 S32: -0.9716 S33: -0.4103 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 202:251 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.315 20.186 20.634 REMARK 3 T TENSOR REMARK 3 T11: 0.2975 T22: 0.3785 REMARK 3 T33: 0.2267 T12: 0.0276 REMARK 3 T13: -0.0045 T23: -0.0661 REMARK 3 L TENSOR REMARK 3 L11: 0.5942 L22: 5.9337 REMARK 3 L33: 1.0503 L12: 0.6746 REMARK 3 L13: 0.1733 L23: -2.0432 REMARK 3 S TENSOR REMARK 3 S11: 0.1030 S12: -0.2064 S13: 0.0626 REMARK 3 S21: 0.7527 S22: -0.1634 S23: 0.0586 REMARK 3 S31: -0.4249 S32: -0.0900 S33: 0.1131 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 252:276 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.310 -4.227 31.083 REMARK 3 T TENSOR REMARK 3 T11: 0.3221 T22: 0.6995 REMARK 3 T33: 0.5700 T12: -0.1198 REMARK 3 T13: 0.1826 T23: 0.0417 REMARK 3 L TENSOR REMARK 3 L11: 5.6133 L22: 2.7842 REMARK 3 L33: 3.0089 L12: -1.2607 REMARK 3 L13: -0.4777 L23: -1.8782 REMARK 3 S TENSOR REMARK 3 S11: 0.2644 S12: -0.8696 S13: -0.4962 REMARK 3 S21: 0.3371 S22: 0.1663 S23: 0.6148 REMARK 3 S31: 0.2314 S32: -0.4258 S33: -0.0471 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 277:377 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.322 8.485 14.554 REMARK 3 T TENSOR REMARK 3 T11: 0.1588 T22: 0.3485 REMARK 3 T33: 0.2759 T12: 0.0343 REMARK 3 T13: -0.0180 T23: -0.0308 REMARK 3 L TENSOR REMARK 3 L11: 1.2365 L22: 4.4511 REMARK 3 L33: 1.8968 L12: -0.4327 REMARK 3 L13: 0.1472 L23: -2.1410 REMARK 3 S TENSOR REMARK 3 S11: 0.0244 S12: -0.0788 S13: -0.0348 REMARK 3 S21: -0.0624 S22: 0.0415 S23: 0.4541 REMARK 3 S31: 0.0163 S32: -0.3937 S33: -0.0092 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 378:430 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.513 20.829 4.629 REMARK 3 T TENSOR REMARK 3 T11: 0.2123 T22: 0.2383 REMARK 3 T33: 0.1882 T12: 0.0688 REMARK 3 T13: 0.0027 T23: -0.0299 REMARK 3 L TENSOR REMARK 3 L11: 4.5063 L22: 3.4005 REMARK 3 L33: 3.0507 L12: 0.8037 REMARK 3 L13: 0.6847 L23: 0.0762 REMARK 3 S TENSOR REMARK 3 S11: 0.0382 S12: 0.5157 S13: -0.0872 REMARK 3 S21: -0.4326 S22: 0.0481 S23: -0.0340 REMARK 3 S31: -0.1523 S32: 0.1910 S33: -0.0777 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN A AND RESID 431:458 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.363 4.188 4.747 REMARK 3 T TENSOR REMARK 3 T11: 0.2722 T22: 0.3932 REMARK 3 T33: 0.3531 T12: 0.0504 REMARK 3 T13: -0.0279 T23: -0.0590 REMARK 3 L TENSOR REMARK 3 L11: 5.0045 L22: 9.2512 REMARK 3 L33: 4.9689 L12: 5.7997 REMARK 3 L13: -1.0917 L23: 0.2092 REMARK 3 S TENSOR REMARK 3 S11: -0.3031 S12: 0.9420 S13: -0.5932 REMARK 3 S21: -0.2242 S22: 0.3687 S23: 0.2357 REMARK 3 S31: 0.4999 S32: -0.5722 S33: -0.0547 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN A AND RESID 459:477 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.312 -4.120 19.906 REMARK 3 T TENSOR REMARK 3 T11: 0.3553 T22: 0.5554 REMARK 3 T33: 0.4970 T12: -0.1574 REMARK 3 T13: -0.0224 T23: 0.0018 REMARK 3 L TENSOR REMARK 3 L11: 5.6692 L22: 1.6271 REMARK 3 L33: 4.0664 L12: -2.5500 REMARK 3 L13: 0.4183 L23: -1.5780 REMARK 3 S TENSOR REMARK 3 S11: -0.0959 S12: 0.2061 S13: -0.7876 REMARK 3 S21: -0.3319 S22: 0.4250 S23: 0.8597 REMARK 3 S31: 0.6773 S32: -0.9004 S33: 0.1825 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8FKG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB. REMARK 100 THE DEPOSITION ID IS D_1000270950. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUL-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18917 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.120 REMARK 200 RESOLUTION RANGE LOW (A) : 30.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 25.20 REMARK 200 R MERGE (I) : 0.14860 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 29.4800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.12 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 26.40 REMARK 200 R MERGE FOR SHELL (I) : 1.08400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.010 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM SULFATE, 0.1M MES, PH REMARK 280 6.5, 30% W/V, PEG 8000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 81.80400 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 30.98400 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 30.98400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 40.90200 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 30.98400 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 30.98400 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 122.70600 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 30.98400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 30.98400 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 40.90200 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 30.98400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 30.98400 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 122.70600 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 81.80400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 637 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP D 2255 REMARK 465 PRO D 2256 REMARK 465 ALA D 2257 REMARK 465 SER D 2258 REMARK 465 GLY D 2272 REMARK 465 SER D 2273 REMARK 465 PHE D 2274 REMARK 465 ASP D 2275 REMARK 465 ASP D 2276 REMARK 465 LYS D 2277 REMARK 465 LYS A 263 REMARK 465 PHE A 264 REMARK 465 LYS A 265 REMARK 465 HIS A 266 REMARK 465 ILE A 267 REMARK 465 THR A 268 REMARK 465 PRO A 269 REMARK 465 LEU A 270 REMARK 465 GLN A 271 REMARK 465 GLU A 272 REMARK 465 GLN A 273 REMARK 465 SER A 274 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 393 43.90 -83.67 REMARK 500 LEU A 476 -160.82 -108.22 REMARK 500 REMARK 500 REMARK: NULL DBREF 8FKG D 2255 2277 UNP O75376 NCOR1_HUMAN 2256 2278 DBREF 8FKG A 203 477 UNP P37231 PPARG_HUMAN 231 505 SEQADV 8FKG GLY A 202 UNP P37231 EXPRESSION TAG SEQRES 1 D 23 ASP PRO ALA SER ASN LEU GLY LEU GLU ASP ILE ILE ARG SEQRES 2 D 23 LYS ALA LEU MET GLY SER PHE ASP ASP LYS SEQRES 1 A 276 GLY GLN LEU ASN PRO GLU SER ALA ASP LEU ARG ALA LEU SEQRES 2 A 276 ALA LYS HIS LEU TYR ASP SER TYR ILE LYS SER PHE PRO SEQRES 3 A 276 LEU THR LYS ALA LYS ALA ARG ALA ILE LEU THR GLY LYS SEQRES 4 A 276 THR THR ASP LYS SER PRO PHE VAL ILE TYR ASP MET ASN SEQRES 5 A 276 SER LEU MET MET GLY GLU ASP LYS ILE LYS PHE LYS HIS SEQRES 6 A 276 ILE THR PRO LEU GLN GLU GLN SER LYS GLU VAL ALA ILE SEQRES 7 A 276 ARG ILE PHE GLN GLY CYS GLN PHE ARG SER VAL GLU ALA SEQRES 8 A 276 VAL GLN GLU ILE THR GLU TYR ALA LYS SER ILE PRO GLY SEQRES 9 A 276 PHE VAL ASN LEU ASP LEU ASN ASP GLN VAL THR LEU LEU SEQRES 10 A 276 LYS TYR GLY VAL HIS GLU ILE ILE TYR THR MET LEU ALA SEQRES 11 A 276 SER LEU MET ASN LYS ASP GLY VAL LEU ILE SER GLU GLY SEQRES 12 A 276 GLN GLY PHE MET THR ARG GLU PHE LEU LYS SER LEU ARG SEQRES 13 A 276 LYS PRO PHE GLY ASP PHE MET GLU PRO LYS PHE GLU PHE SEQRES 14 A 276 ALA VAL LYS PHE ASN ALA LEU GLU LEU ASP ASP SER ASP SEQRES 15 A 276 LEU ALA ILE PHE ILE ALA VAL ILE ILE LEU SER GLY ASP SEQRES 16 A 276 ARG PRO GLY LEU LEU ASN VAL LYS PRO ILE GLU ASP ILE SEQRES 17 A 276 GLN ASP ASN LEU LEU GLN ALA LEU GLU LEU GLN LEU LYS SEQRES 18 A 276 LEU ASN HIS PRO GLU SER SER GLN LEU PHE ALA LYS LEU SEQRES 19 A 276 LEU GLN LYS MET THR ASP LEU ARG GLN ILE VAL THR GLU SEQRES 20 A 276 HIS VAL GLN LEU LEU GLN VAL ILE LYS LYS THR GLU THR SEQRES 21 A 276 ASP MET SER LEU HIS PRO LEU LEU GLN GLU ILE TYR LYS SEQRES 22 A 276 ASP LEU TYR HET GOL A 501 6 HET Y62 A 502 20 HET GOL A 503 6 HET SO4 A 504 5 HET EDO A 505 4 HET EDO A 506 4 HET EDO A 507 4 HET EDO A 508 4 HET EDO A 509 4 HET EDO A 510 4 HET EDO A 511 4 HET EDO A 512 4 HET K A 513 1 HETNAM GOL GLYCEROL HETNAM Y62 2-CHLORO-N-(5-CYANOPYRIDIN-2-YL)-5-NITROBENZAMIDE HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM K POTASSIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 GOL 2(C3 H8 O3) FORMUL 4 Y62 C13 H7 CL N4 O3 FORMUL 6 SO4 O4 S 2- FORMUL 7 EDO 8(C2 H6 O2) FORMUL 15 K K 1+ FORMUL 16 HOH *123(H2 O) HELIX 1 AA1 ASN D 2259 MET D 2271 1 13 HELIX 2 AA2 ASN A 205 PHE A 226 1 22 HELIX 3 AA3 THR A 229 THR A 238 1 10 HELIX 4 AA4 ASP A 251 GLY A 258 1 8 HELIX 5 AA5 GLU A 276 SER A 289 1 14 HELIX 6 AA6 SER A 289 SER A 302 1 14 HELIX 7 AA7 ASP A 310 LEU A 333 1 24 HELIX 8 AA8 ARG A 350 LEU A 356 1 7 HELIX 9 AA9 PRO A 359 PHE A 363 5 5 HELIX 10 AB1 MET A 364 ALA A 376 1 13 HELIX 11 AB2 ASP A 380 LEU A 393 1 14 HELIX 12 AB3 ASN A 402 HIS A 425 1 24 HELIX 13 AB4 GLN A 430 THR A 459 1 30 HELIX 14 AB5 HIS A 466 LYS A 474 1 9 SHEET 1 AA1 4 PHE A 247 ILE A 249 0 SHEET 2 AA1 4 GLY A 346 THR A 349 1 O PHE A 347 N ILE A 249 SHEET 3 AA1 4 GLY A 338 ILE A 341 -1 N VAL A 339 O MET A 348 SHEET 4 AA1 4 MET A 334 ASN A 335 -1 N ASN A 335 O GLY A 338 LINK SG CYS A 285 C05 Y62 A 502 1555 1555 1.77 LINK O3 SO4 A 504 K K A 513 1555 1555 2.96 CISPEP 1 LYS A 358 PRO A 359 0 -0.43 CRYST1 61.968 61.968 163.608 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016137 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016137 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006112 0.00000