HEADER SIGNALING PROTEIN 27-DEC-22 8FNB TITLE CRYSTAL STRUCTURE OF THE C-TERMINAL FG DOMAIN OF HUMAN TNC WITH THE TITLE 2 MUTATIONS Y2140H AND S2164H COMPND MOL_ID: 1; COMPND 2 MOLECULE: TENASCIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: FG DOMAIN (UNP RESIDUES 1975-2201); COMPND 5 SYNONYM: TN,CYTOTACTIN,GMEM,GP 150-225,GLIOMA-ASSOCIATED- COMPND 6 EXTRACELLULAR MATRIX ANTIGEN,HEXABRACHION,JI,MYOTENDINOUS ANTIGEN, COMPND 7 NEURONECTIN,TENASCIN-C,TN-C; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TNC, HXB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET32 KEYWDS EXTRACELLULAR MATRIX, FIBRINOGEN, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.BOUYAIN REVDAT 3 25-OCT-23 8FNB 1 REMARK REVDAT 2 02-AUG-23 8FNB 1 JRNL REVDAT 1 12-JUL-23 8FNB 0 JRNL AUTH A.SINHA,J.KAWAKAMI,K.S.COLE,A.LADUTSKA,M.Y.NGUYEN, JRNL AUTH 2 M.S.ZALMAI,B.L.HOLDER,V.M.BROERMAN,R.T.MATTHEWS,S.BOUYAIN JRNL TITL PROTEIN-PROTEIN INTERACTIONS BETWEEN TENASCIN-R AND RPTP JRNL TITL 2 ZETA /PHOSPHACAN ARE CRITICAL TO MAINTAIN THE ARCHITECTURE JRNL TITL 3 OF PERINEURONAL NETS. JRNL REF J.BIOL.CHEM. V. 299 04952 2023 JRNL REFN ESSN 1083-351X JRNL PMID 37356715 JRNL DOI 10.1016/J.JBC.2023.104952 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.83 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.6 REMARK 3 NUMBER OF REFLECTIONS : 44562 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.153 REMARK 3 R VALUE (WORKING SET) : 0.152 REMARK 3 FREE R VALUE : 0.174 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.300 REMARK 3 FREE R VALUE TEST SET COUNT : 1915 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.8300 - 4.3300 0.99 3235 142 0.1529 0.1374 REMARK 3 2 4.3300 - 3.4400 0.99 3234 143 0.1308 0.1350 REMARK 3 3 3.4400 - 3.0000 1.00 3211 145 0.1501 0.1856 REMARK 3 4 3.0000 - 2.7300 1.00 3193 143 0.1680 0.2216 REMARK 3 5 2.7300 - 2.5300 0.99 3181 143 0.1521 0.1713 REMARK 3 6 2.5300 - 2.3800 0.98 3189 144 0.1486 0.1878 REMARK 3 7 2.3800 - 2.2600 0.98 3139 142 0.1467 0.2134 REMARK 3 8 2.2600 - 2.1700 0.98 3118 147 0.1560 0.1751 REMARK 3 9 2.1700 - 2.0800 0.97 3108 139 0.1566 0.1959 REMARK 3 10 2.0800 - 2.0100 0.96 3070 140 0.1586 0.1945 REMARK 3 11 2.0100 - 1.9500 0.94 3020 131 0.1559 0.1811 REMARK 3 12 1.9500 - 1.8900 0.90 2881 130 0.1790 0.2188 REMARK 3 13 1.8900 - 1.8400 0.83 2664 121 0.1846 0.2378 REMARK 3 14 1.8400 - 1.8000 0.74 2404 105 0.2030 0.2678 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.156 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.051 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.27 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 3660 REMARK 3 ANGLE : 0.872 4934 REMARK 3 CHIRALITY : 0.053 476 REMARK 3 PLANARITY : 0.008 648 REMARK 3 DIHEDRAL : 14.098 1298 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1976 THROUGH 2057 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.5622 42.3598 48.5235 REMARK 3 T TENSOR REMARK 3 T11: 0.3017 T22: 0.2375 REMARK 3 T33: 0.2426 T12: 0.0110 REMARK 3 T13: -0.0274 T23: 0.0077 REMARK 3 L TENSOR REMARK 3 L11: 1.2955 L22: 1.3979 REMARK 3 L33: 1.0246 L12: -0.2577 REMARK 3 L13: 0.0114 L23: -0.3520 REMARK 3 S TENSOR REMARK 3 S11: 0.0074 S12: 0.0451 S13: 0.1613 REMARK 3 S21: -0.1087 S22: -0.0110 S23: 0.1161 REMARK 3 S31: -0.0597 S32: -0.0629 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2058 THROUGH 2078 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.8673 38.4878 56.7230 REMARK 3 T TENSOR REMARK 3 T11: 0.2630 T22: 0.2691 REMARK 3 T33: 0.2742 T12: 0.0190 REMARK 3 T13: 0.0015 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 0.5486 L22: 0.4007 REMARK 3 L33: 0.3755 L12: -0.2244 REMARK 3 L13: -0.1161 L23: -0.2821 REMARK 3 S TENSOR REMARK 3 S11: 0.0609 S12: 0.0250 S13: 0.0954 REMARK 3 S21: -0.1677 S22: -0.0225 S23: 0.0481 REMARK 3 S31: 0.0098 S32: -0.0368 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2079 THROUGH 2150 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.3419 30.9047 61.2134 REMARK 3 T TENSOR REMARK 3 T11: 0.2280 T22: 0.2458 REMARK 3 T33: 0.1765 T12: 0.0225 REMARK 3 T13: 0.0121 T23: -0.0082 REMARK 3 L TENSOR REMARK 3 L11: 2.5620 L22: 1.6458 REMARK 3 L33: 0.9008 L12: 0.3578 REMARK 3 L13: 0.1821 L23: -0.2383 REMARK 3 S TENSOR REMARK 3 S11: 0.0317 S12: -0.0795 S13: 0.0560 REMARK 3 S21: 0.0276 S22: -0.0354 S23: -0.0863 REMARK 3 S31: 0.0351 S32: 0.1040 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2151 THROUGH 2194 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.2236 25.8068 53.7770 REMARK 3 T TENSOR REMARK 3 T11: 0.2702 T22: 0.2348 REMARK 3 T33: 0.1952 T12: -0.0004 REMARK 3 T13: -0.0082 T23: -0.0162 REMARK 3 L TENSOR REMARK 3 L11: 0.7565 L22: 1.0349 REMARK 3 L33: 1.4233 L12: 0.4002 REMARK 3 L13: -0.1360 L23: -0.3300 REMARK 3 S TENSOR REMARK 3 S11: -0.0101 S12: 0.0684 S13: -0.0826 REMARK 3 S21: -0.2013 S22: -0.0771 S23: 0.0709 REMARK 3 S31: 0.0651 S32: 0.0494 S33: 0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1976 THROUGH 2014 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.8134 39.5039 33.1196 REMARK 3 T TENSOR REMARK 3 T11: 0.3177 T22: 0.2857 REMARK 3 T33: 0.3755 T12: 0.0274 REMARK 3 T13: -0.0271 T23: 0.0330 REMARK 3 L TENSOR REMARK 3 L11: 0.5151 L22: 0.6039 REMARK 3 L33: 0.7559 L12: -0.5043 REMARK 3 L13: -0.2103 L23: 0.1419 REMARK 3 S TENSOR REMARK 3 S11: -0.0517 S12: -0.1508 S13: -0.1249 REMARK 3 S21: 0.2127 S22: -0.0277 S23: -0.0896 REMARK 3 S31: 0.2487 S32: 0.0515 S33: 0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2015 THROUGH 2057 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.3438 52.3528 21.3408 REMARK 3 T TENSOR REMARK 3 T11: 0.2252 T22: 0.2205 REMARK 3 T33: 0.2771 T12: 0.0096 REMARK 3 T13: 0.0197 T23: 0.0174 REMARK 3 L TENSOR REMARK 3 L11: 1.3847 L22: 1.0639 REMARK 3 L33: 1.0266 L12: -0.2932 REMARK 3 L13: -0.4347 L23: -0.0300 REMARK 3 S TENSOR REMARK 3 S11: 0.1014 S12: 0.1199 S13: 0.0326 REMARK 3 S21: -0.0524 S22: 0.0013 S23: -0.1834 REMARK 3 S31: 0.0152 S32: 0.1276 S33: 0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2058 THROUGH 2097 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.4877 53.0414 30.6152 REMARK 3 T TENSOR REMARK 3 T11: 0.2353 T22: 0.2557 REMARK 3 T33: 0.2373 T12: 0.0020 REMARK 3 T13: 0.0057 T23: 0.0207 REMARK 3 L TENSOR REMARK 3 L11: 0.7858 L22: 1.0568 REMARK 3 L33: 1.7443 L12: -0.8449 REMARK 3 L13: 0.3107 L23: -0.0707 REMARK 3 S TENSOR REMARK 3 S11: 0.0211 S12: -0.0414 S13: 0.0002 REMARK 3 S21: 0.1376 S22: -0.0126 S23: -0.0006 REMARK 3 S31: 0.1371 S32: 0.0025 S33: 0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2098 THROUGH 2150 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.2258 58.5336 21.8185 REMARK 3 T TENSOR REMARK 3 T11: 0.2239 T22: 0.2644 REMARK 3 T33: 0.2137 T12: -0.0026 REMARK 3 T13: 0.0136 T23: 0.0265 REMARK 3 L TENSOR REMARK 3 L11: 1.3776 L22: 1.1740 REMARK 3 L33: 0.9168 L12: -0.4431 REMARK 3 L13: 0.5531 L23: -0.1205 REMARK 3 S TENSOR REMARK 3 S11: 0.0538 S12: 0.0745 S13: 0.0293 REMARK 3 S21: -0.1697 S22: -0.0230 S23: 0.1367 REMARK 3 S31: 0.0143 S32: -0.1875 S33: 0.0000 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2151 THROUGH 2194 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.7512 63.0385 25.9231 REMARK 3 T TENSOR REMARK 3 T11: 0.1988 T22: 0.2412 REMARK 3 T33: 0.2558 T12: -0.0071 REMARK 3 T13: 0.0319 T23: 0.0066 REMARK 3 L TENSOR REMARK 3 L11: 1.4028 L22: 1.0853 REMARK 3 L33: 0.8328 L12: 0.0755 REMARK 3 L13: -0.3310 L23: 0.5550 REMARK 3 S TENSOR REMARK 3 S11: 0.0386 S12: 0.0865 S13: 0.0200 REMARK 3 S21: -0.0447 S22: -0.0690 S23: -0.2158 REMARK 3 S31: -0.0960 S32: 0.0292 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8FNB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JAN-23. REMARK 100 THE DEPOSITION ID IS D_1000271040. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-AUG-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : 1.00 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46455 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.25000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2J3F REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM LITHIUM SULFATE, 25% PEG1500, REMARK 280 50 MM TRIS, PH 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 53.02250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 50.78050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 53.02250 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 50.78050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1971 REMARK 465 THR A 1972 REMARK 465 GLY A 1973 REMARK 465 SER A 1974 REMARK 465 GLY A 1975 REMARK 465 GLU A 2195 REMARK 465 GLY A 2196 REMARK 465 ARG A 2197 REMARK 465 ARG A 2198 REMARK 465 LYS A 2199 REMARK 465 ARG A 2200 REMARK 465 ALA A 2201 REMARK 465 GLY B 1971 REMARK 465 THR B 1972 REMARK 465 GLY B 1973 REMARK 465 SER B 1974 REMARK 465 GLY B 1975 REMARK 465 GLU B 2195 REMARK 465 GLY B 2196 REMARK 465 ARG B 2197 REMARK 465 ARG B 2198 REMARK 465 LYS B 2199 REMARK 465 ARG B 2200 REMARK 465 ALA B 2201 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A2030 -16.31 -157.89 REMARK 500 ASN A2031 2.43 -155.89 REMARK 500 GLU A2052 -132.35 -133.46 REMARK 500 ASP A2078 107.67 -160.43 REMARK 500 ARG A2147 -93.08 -116.25 REMARK 500 ASN A2148 66.43 -155.95 REMARK 500 ASN A2153 53.04 -143.18 REMARK 500 GLU B2008 50.60 -113.48 REMARK 500 LYS B2030 -15.98 -157.33 REMARK 500 ASN B2031 2.50 -154.82 REMARK 500 GLU B2052 -129.79 -134.93 REMARK 500 ASP B2078 111.87 -160.00 REMARK 500 ARG B2147 -94.49 -114.74 REMARK 500 ASN B2148 66.93 -153.97 REMARK 500 ASN B2153 53.50 -143.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A2301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A2128 OD1 REMARK 620 2 ASP A2128 OD2 52.5 REMARK 620 3 ASP A2130 OD1 77.5 119.9 REMARK 620 4 ALA A2132 O 150.3 156.2 81.4 REMARK 620 5 THR A2134 O 122.2 87.8 94.2 79.7 REMARK 620 6 HOH A2462 O 76.1 108.2 86.1 82.0 161.4 REMARK 620 7 HOH A2548 O 114.8 80.3 158.7 80.4 93.3 80.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B2301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B2128 OD1 REMARK 620 2 ASP B2128 OD2 52.5 REMARK 620 3 ASP B2130 OD1 78.2 120.7 REMARK 620 4 ALA B2132 O 150.2 155.8 81.5 REMARK 620 5 THR B2134 O 123.2 88.2 94.9 79.9 REMARK 620 6 HOH B2410 O 74.0 108.4 82.8 82.0 162.0 REMARK 620 7 HOH B2538 O 113.5 77.8 160.6 81.5 91.3 85.7 REMARK 620 N 1 2 3 4 5 6 DBREF 8FNB A 1975 2201 UNP P24821 TENA_HUMAN 1975 2201 DBREF 8FNB B 1975 2201 UNP P24821 TENA_HUMAN 1975 2201 SEQADV 8FNB GLY A 1971 UNP P24821 EXPRESSION TAG SEQADV 8FNB THR A 1972 UNP P24821 EXPRESSION TAG SEQADV 8FNB GLY A 1973 UNP P24821 EXPRESSION TAG SEQADV 8FNB SER A 1974 UNP P24821 EXPRESSION TAG SEQADV 8FNB HIS A 2140 UNP P24821 TYR 2140 ENGINEERED MUTATION SEQADV 8FNB HIS A 2164 UNP P24821 SER 2164 ENGINEERED MUTATION SEQADV 8FNB GLY B 1971 UNP P24821 EXPRESSION TAG SEQADV 8FNB THR B 1972 UNP P24821 EXPRESSION TAG SEQADV 8FNB GLY B 1973 UNP P24821 EXPRESSION TAG SEQADV 8FNB SER B 1974 UNP P24821 EXPRESSION TAG SEQADV 8FNB HIS B 2140 UNP P24821 TYR 2140 ENGINEERED MUTATION SEQADV 8FNB HIS B 2164 UNP P24821 SER 2164 ENGINEERED MUTATION SEQRES 1 A 231 GLY THR GLY SER GLY LEU LEU TYR PRO PHE PRO LYS ASP SEQRES 2 A 231 CYS SER GLN ALA MET LEU ASN GLY ASP THR THR SER GLY SEQRES 3 A 231 LEU TYR THR ILE TYR LEU ASN GLY ASP LYS ALA GLU ALA SEQRES 4 A 231 LEU GLU VAL PHE CYS ASP MET THR SER ASP GLY GLY GLY SEQRES 5 A 231 TRP ILE VAL PHE LEU ARG ARG LYS ASN GLY ARG GLU ASN SEQRES 6 A 231 PHE TYR GLN ASN TRP LYS ALA TYR ALA ALA GLY PHE GLY SEQRES 7 A 231 ASP ARG ARG GLU GLU PHE TRP LEU GLY LEU ASP ASN LEU SEQRES 8 A 231 ASN LYS ILE THR ALA GLN GLY GLN TYR GLU LEU ARG VAL SEQRES 9 A 231 ASP LEU ARG ASP HIS GLY GLU THR ALA PHE ALA VAL TYR SEQRES 10 A 231 ASP LYS PHE SER VAL GLY ASP ALA LYS THR ARG TYR LYS SEQRES 11 A 231 LEU LYS VAL GLU GLY TYR SER GLY THR ALA GLY ASP SER SEQRES 12 A 231 MET ALA TYR HIS ASN GLY ARG SER PHE SER THR PHE ASP SEQRES 13 A 231 LYS ASP THR ASP SER ALA ILE THR ASN CYS ALA LEU SER SEQRES 14 A 231 HIS LYS GLY ALA PHE TRP TYR ARG ASN CYS HIS ARG VAL SEQRES 15 A 231 ASN LEU MET GLY ARG TYR GLY ASP ASN ASN HIS HIS GLN SEQRES 16 A 231 GLY VAL ASN TRP PHE HIS TRP LYS GLY HIS GLU HIS SER SEQRES 17 A 231 ILE GLN PHE ALA GLU MET LYS LEU ARG PRO SER ASN PHE SEQRES 18 A 231 ARG ASN LEU GLU GLY ARG ARG LYS ARG ALA SEQRES 1 B 231 GLY THR GLY SER GLY LEU LEU TYR PRO PHE PRO LYS ASP SEQRES 2 B 231 CYS SER GLN ALA MET LEU ASN GLY ASP THR THR SER GLY SEQRES 3 B 231 LEU TYR THR ILE TYR LEU ASN GLY ASP LYS ALA GLU ALA SEQRES 4 B 231 LEU GLU VAL PHE CYS ASP MET THR SER ASP GLY GLY GLY SEQRES 5 B 231 TRP ILE VAL PHE LEU ARG ARG LYS ASN GLY ARG GLU ASN SEQRES 6 B 231 PHE TYR GLN ASN TRP LYS ALA TYR ALA ALA GLY PHE GLY SEQRES 7 B 231 ASP ARG ARG GLU GLU PHE TRP LEU GLY LEU ASP ASN LEU SEQRES 8 B 231 ASN LYS ILE THR ALA GLN GLY GLN TYR GLU LEU ARG VAL SEQRES 9 B 231 ASP LEU ARG ASP HIS GLY GLU THR ALA PHE ALA VAL TYR SEQRES 10 B 231 ASP LYS PHE SER VAL GLY ASP ALA LYS THR ARG TYR LYS SEQRES 11 B 231 LEU LYS VAL GLU GLY TYR SER GLY THR ALA GLY ASP SER SEQRES 12 B 231 MET ALA TYR HIS ASN GLY ARG SER PHE SER THR PHE ASP SEQRES 13 B 231 LYS ASP THR ASP SER ALA ILE THR ASN CYS ALA LEU SER SEQRES 14 B 231 HIS LYS GLY ALA PHE TRP TYR ARG ASN CYS HIS ARG VAL SEQRES 15 B 231 ASN LEU MET GLY ARG TYR GLY ASP ASN ASN HIS HIS GLN SEQRES 16 B 231 GLY VAL ASN TRP PHE HIS TRP LYS GLY HIS GLU HIS SER SEQRES 17 B 231 ILE GLN PHE ALA GLU MET LYS LEU ARG PRO SER ASN PHE SEQRES 18 B 231 ARG ASN LEU GLU GLY ARG ARG LYS ARG ALA HET CA A2301 1 HET SO4 A2302 5 HET CA B2301 1 HET SO4 B2302 5 HETNAM CA CALCIUM ION HETNAM SO4 SULFATE ION FORMUL 3 CA 2(CA 2+) FORMUL 4 SO4 2(O4 S 2-) FORMUL 7 HOH *433(H2 O) HELIX 1 AA1 ASP A 1983 ASN A 1990 1 8 HELIX 2 AA2 ASN A 2003 ALA A 2007 5 5 HELIX 3 AA3 THR A 2017 GLY A 2021 5 5 HELIX 4 AA4 ASN A 2039 GLY A 2046 1 8 HELIX 5 AA5 GLY A 2057 ALA A 2066 1 10 HELIX 6 AA6 ASP A 2094 ARG A 2098 5 5 HELIX 7 AA7 MET A 2114 ASN A 2118 5 5 HELIX 8 AA8 ASN A 2135 LYS A 2141 1 7 HELIX 9 AA9 PHE A 2170 GLY A 2174 1 5 HELIX 10 AB1 ASN A 2190 LEU A 2194 5 5 HELIX 11 AB2 ASP B 1983 ASN B 1990 1 8 HELIX 12 AB3 ASN B 2003 ALA B 2007 5 5 HELIX 13 AB4 THR B 2017 GLY B 2021 5 5 HELIX 14 AB5 ASN B 2039 GLY B 2046 1 8 HELIX 15 AB6 GLY B 2057 ALA B 2066 1 10 HELIX 16 AB7 ASP B 2094 ARG B 2098 5 5 HELIX 17 AB8 MET B 2114 ASN B 2118 5 5 HELIX 18 AB9 ASN B 2135 LYS B 2141 1 7 HELIX 19 AC1 PHE B 2170 GLY B 2174 1 5 HELIX 20 AC2 ASN B 2190 LEU B 2194 5 5 SHEET 1 AA1 5 GLY A1996 TYR A2001 0 SHEET 2 AA1 5 ALA A2009 ASP A2015 -1 O LEU A2010 N ILE A2000 SHEET 3 AA1 5 TRP A2023 ARG A2029 -1 O TRP A2023 N ASP A2015 SHEET 4 AA1 5 PHE A2054 TRP A2055 -1 O PHE A2054 N ARG A2028 SHEET 5 AA1 5 PHE A2047 GLY A2048 -1 N PHE A2047 O TRP A2055 SHEET 1 AA2 7 GLY A1996 TYR A2001 0 SHEET 2 AA2 7 ALA A2009 ASP A2015 -1 O LEU A2010 N ILE A2000 SHEET 3 AA2 7 TRP A2023 ARG A2029 -1 O TRP A2023 N ASP A2015 SHEET 4 AA2 7 PHE A2181 PRO A2188 -1 O MET A2184 N PHE A2026 SHEET 5 AA2 7 TYR A2070 ASP A2078 -1 N GLU A2071 O ARG A2187 SHEET 6 AA2 7 GLU A2081 VAL A2092 -1 O ALA A2085 N VAL A2074 SHEET 7 AA2 7 LEU A2101 GLY A2108 -1 O SER A2107 N VAL A2086 SHEET 1 AA3 2 VAL A2152 ASN A2153 0 SHEET 2 AA3 2 ASN A2168 TRP A2169 -1 O ASN A2168 N ASN A2153 SHEET 1 AA4 5 GLY B1996 TYR B2001 0 SHEET 2 AA4 5 ALA B2009 ASP B2015 -1 O CYS B2014 N GLY B1996 SHEET 3 AA4 5 TRP B2023 ARG B2029 -1 O TRP B2023 N ASP B2015 SHEET 4 AA4 5 PHE B2054 TRP B2055 -1 O PHE B2054 N ARG B2028 SHEET 5 AA4 5 PHE B2047 GLY B2048 -1 N PHE B2047 O TRP B2055 SHEET 1 AA5 7 GLY B1996 TYR B2001 0 SHEET 2 AA5 7 ALA B2009 ASP B2015 -1 O CYS B2014 N GLY B1996 SHEET 3 AA5 7 TRP B2023 ARG B2029 -1 O TRP B2023 N ASP B2015 SHEET 4 AA5 7 PHE B2181 PRO B2188 -1 O LEU B2186 N ILE B2024 SHEET 5 AA5 7 TYR B2070 ASP B2078 -1 N GLU B2071 O ARG B2187 SHEET 6 AA5 7 GLU B2081 VAL B2092 -1 O ALA B2085 N VAL B2074 SHEET 7 AA5 7 LEU B2101 GLY B2108 -1 O SER B2107 N VAL B2086 SHEET 1 AA6 2 VAL B2152 ASN B2153 0 SHEET 2 AA6 2 ASN B2168 TRP B2169 -1 O ASN B2168 N ASN B2153 SSBOND 1 CYS A 1984 CYS A 2014 1555 1555 2.06 SSBOND 2 CYS A 2136 CYS A 2149 1555 1555 2.05 SSBOND 3 CYS B 1984 CYS B 2014 1555 1555 2.05 SSBOND 4 CYS B 2136 CYS B 2149 1555 1555 2.07 LINK OD1 ASP A2128 CA CA A2301 1555 1555 2.58 LINK OD2 ASP A2128 CA CA A2301 1555 1555 2.36 LINK OD1 ASP A2130 CA CA A2301 1555 1555 2.38 LINK O ALA A2132 CA CA A2301 1555 1555 2.33 LINK O THR A2134 CA CA A2301 1555 1555 2.30 LINK CA CA A2301 O HOH A2462 1555 1555 2.42 LINK CA CA A2301 O HOH A2548 1555 1555 2.45 LINK OD1 ASP B2128 CA CA B2301 1555 1555 2.60 LINK OD2 ASP B2128 CA CA B2301 1555 1555 2.33 LINK OD1 ASP B2130 CA CA B2301 1555 1555 2.37 LINK O ALA B2132 CA CA B2301 1555 1555 2.35 LINK O THR B2134 CA CA B2301 1555 1555 2.34 LINK CA CA B2301 O HOH B2410 1555 1555 2.45 LINK CA CA B2301 O HOH B2538 1555 1555 2.47 CISPEP 1 ASN A 2148 CYS A 2149 0 -2.36 CISPEP 2 ASN B 2148 CYS B 2149 0 -1.39 CRYST1 106.045 101.561 56.667 90.00 122.35 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009430 0.000000 0.005974 0.00000 SCALE2 0.000000 0.009846 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020890 0.00000