HEADER HYDROLASE/HYDROLASE INHIBITOR 06-JAN-23 8FQU TITLE ADC-219 IN COMPLEX WITH BORONIC ACID TRANSITION STATE INHIBITOR MB076 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: B, A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACINETOBACTER BAUMANNII; SOURCE 3 ORGANISM_TAXID: 470; SOURCE 4 GENE: AMPC; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS BATSI, INHIBITOR, ACINETOBACTER-DERIVED CEPHALOSPORINASE, HYDROLASE, KEYWDS 2 HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR R.A.POWERS,B.J.WALLAR,C.M.JUNE,O.L.MAURER REVDAT 4 25-OCT-23 8FQU 1 REMARK REVDAT 3 26-JUL-23 8FQU 1 JRNL REVDAT 2 12-JUL-23 8FQU 1 JRNL REVDAT 1 05-JUL-23 8FQU 0 JRNL AUTH R.A.POWERS,C.M.JUNE,M.C.FERNANDO,E.R.FISH,O.L.MAURER, JRNL AUTH 2 R.M.BAUMANN,T.J.BEARDSLEY,M.A.TARACILA,S.D.RUDIN,K.M.HUJER, JRNL AUTH 3 A.M.HUJER,N.SANTI,V.VILLAMIL,M.L.INTROVIGNE,F.PRATI, JRNL AUTH 4 E.CASELLI,R.A.BONOMO,B.J.WALLAR JRNL TITL SYNTHESIS OF A NOVEL BORONIC ACID TRANSITION STATE JRNL TITL 2 INHIBITOR, MB076: A HETEROCYCLIC TRIAZOLE EFFECTIVELY JRNL TITL 3 INHIBITS ACINETOBACTER -DERIVED CEPHALOSPORINASE VARIANTS JRNL TITL 4 WITH AN EXPANDED-SUBSTRATE SPECTRUM. JRNL REF J.MED.CHEM. V. 66 8510 2023 JRNL REFN ISSN 0022-2623 JRNL PMID 37358467 JRNL DOI 10.1021/ACS.JMEDCHEM.3C00144 REMARK 2 REMARK 2 RESOLUTION. 1.49 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX V1.19 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.49 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.19 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 70.4 REMARK 3 NUMBER OF REFLECTIONS : 81264 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.880 REMARK 3 FREE R VALUE TEST SET COUNT : 3966 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.1900 - 4.5100 0.99 3936 195 0.1478 0.1675 REMARK 3 2 4.5100 - 3.5800 0.99 3920 211 0.1296 0.1636 REMARK 3 3 3.5800 - 3.1300 0.96 3794 209 0.1589 0.1795 REMARK 3 4 3.1300 - 2.8500 0.91 3578 190 0.1759 0.2254 REMARK 3 5 2.8500 - 2.6400 0.98 3849 207 0.1844 0.2237 REMARK 3 6 2.6400 - 2.4900 0.98 3883 184 0.1791 0.2138 REMARK 3 7 2.4900 - 2.3600 0.99 3852 208 0.1794 0.1964 REMARK 3 8 2.3600 - 2.2600 0.99 3904 171 0.1778 0.2198 REMARK 3 9 2.2600 - 2.1700 0.98 3856 212 0.1658 0.2115 REMARK 3 10 2.1700 - 2.1000 0.98 3859 197 0.1751 0.2198 REMARK 3 11 2.1000 - 2.0300 0.98 3871 212 0.1757 0.2284 REMARK 3 12 2.0300 - 1.9700 0.99 3792 202 0.1820 0.2244 REMARK 3 13 1.9700 - 1.9200 0.99 3914 183 0.1897 0.2277 REMARK 3 14 1.9200 - 1.8700 0.98 3881 178 0.2061 0.2377 REMARK 3 15 1.8700 - 1.8300 0.99 3818 197 0.2138 0.2784 REMARK 3 16 1.8300 - 1.7900 0.98 3856 223 0.2195 0.2534 REMARK 3 17 1.7900 - 1.7600 0.92 3567 196 0.2378 0.2687 REMARK 3 18 1.7600 - 1.7200 0.74 2939 139 0.2430 0.2772 REMARK 3 19 1.7200 - 1.6900 0.68 2641 134 0.2499 0.2626 REMARK 3 20 1.6900 - 1.6600 0.52 2039 118 0.2490 0.2928 REMARK 3 21 1.6600 - 1.6400 0.34 1342 53 0.2433 0.2651 REMARK 3 22 1.6400 - 1.6100 0.27 1070 51 0.2499 0.2903 REMARK 3 23 1.6100 - 1.5900 0.20 760 45 0.2478 0.2724 REMARK 3 24 1.5900 - 1.5700 0.14 554 23 0.2347 0.2700 REMARK 3 25 1.5700 - 1.5500 0.11 443 12 0.2388 0.3090 REMARK 3 26 1.5500 - 1.5300 0.06 247 4 0.2492 0.3370 REMARK 3 27 1.5300 - 1.5100 0.03 101 10 0.2335 0.1719 REMARK 3 28 1.5100 - 1.4900 0.01 32 2 0.2460 0.1120 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.420 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 5932 REMARK 3 ANGLE : 0.885 8052 REMARK 3 CHIRALITY : 0.082 874 REMARK 3 PLANARITY : 0.006 1047 REMARK 3 DIHEDRAL : 13.295 2214 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 192 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.3557 -5.4065 23.7732 REMARK 3 T TENSOR REMARK 3 T11: 0.1089 T22: 0.0819 REMARK 3 T33: 0.0736 T12: 0.0072 REMARK 3 T13: 0.0117 T23: 0.0240 REMARK 3 L TENSOR REMARK 3 L11: 0.7501 L22: 2.8422 REMARK 3 L33: 1.6489 L12: 0.1806 REMARK 3 L13: 0.0962 L23: 1.7225 REMARK 3 S TENSOR REMARK 3 S11: 0.0247 S12: 0.0023 S13: 0.0262 REMARK 3 S21: -0.1812 S22: -0.0241 S23: 0.0485 REMARK 3 S31: -0.1921 S32: -0.0659 S33: -0.0068 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 193 THROUGH 360 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.2570 -6.1248 14.9369 REMARK 3 T TENSOR REMARK 3 T11: 0.1674 T22: 0.0983 REMARK 3 T33: 0.0715 T12: 0.0028 REMARK 3 T13: 0.0050 T23: 0.0020 REMARK 3 L TENSOR REMARK 3 L11: 1.3767 L22: 2.3894 REMARK 3 L33: 1.6066 L12: 0.0192 REMARK 3 L13: -0.2943 L23: 0.9974 REMARK 3 S TENSOR REMARK 3 S11: 0.0534 S12: 0.0782 S13: 0.0821 REMARK 3 S21: -0.2621 S22: 0.0051 S23: -0.1037 REMARK 3 S31: -0.3090 S32: 0.0091 S33: -0.0522 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 62 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.7354 50.1983 -12.4794 REMARK 3 T TENSOR REMARK 3 T11: 0.0869 T22: 0.1070 REMARK 3 T33: 0.1651 T12: -0.0124 REMARK 3 T13: -0.0009 T23: 0.0321 REMARK 3 L TENSOR REMARK 3 L11: 1.0542 L22: 1.5287 REMARK 3 L33: 1.2176 L12: -0.8614 REMARK 3 L13: 0.2864 L23: -0.0917 REMARK 3 S TENSOR REMARK 3 S11: 0.0362 S12: 0.1778 S13: 0.2772 REMARK 3 S21: -0.1276 S22: -0.0608 S23: -0.2021 REMARK 3 S31: -0.1319 S32: 0.1353 S33: 0.0168 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 63 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.0455 25.9221 12.3060 REMARK 3 T TENSOR REMARK 3 T11: 0.1125 T22: 0.1382 REMARK 3 T33: 0.0877 T12: 0.0343 REMARK 3 T13: -0.0078 T23: -0.0022 REMARK 3 L TENSOR REMARK 3 L11: 0.9399 L22: 1.0931 REMARK 3 L33: 1.6270 L12: 0.3743 REMARK 3 L13: -0.2699 L23: -0.2586 REMARK 3 S TENSOR REMARK 3 S11: -0.0191 S12: -0.1733 S13: -0.0409 REMARK 3 S21: 0.1381 S22: 0.0055 S23: -0.0437 REMARK 3 S31: 0.0964 S32: 0.0655 S33: 0.0177 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 167 THROUGH 228 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.8770 44.2004 6.2156 REMARK 3 T TENSOR REMARK 3 T11: 0.1222 T22: 0.1266 REMARK 3 T33: 0.1438 T12: 0.0104 REMARK 3 T13: 0.0133 T23: -0.0086 REMARK 3 L TENSOR REMARK 3 L11: 2.0151 L22: 0.6935 REMARK 3 L33: 1.7223 L12: -0.6624 REMARK 3 L13: 1.0593 L23: -0.0912 REMARK 3 S TENSOR REMARK 3 S11: -0.0385 S12: -0.2829 S13: 0.1502 REMARK 3 S21: 0.1630 S22: 0.0533 S23: 0.0380 REMARK 3 S31: -0.0217 S32: -0.1610 S33: -0.0223 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 229 THROUGH 308 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.8014 33.0103 -3.7740 REMARK 3 T TENSOR REMARK 3 T11: 0.0701 T22: 0.1197 REMARK 3 T33: 0.0957 T12: 0.0116 REMARK 3 T13: -0.0031 T23: -0.0012 REMARK 3 L TENSOR REMARK 3 L11: 1.0392 L22: 1.3380 REMARK 3 L33: 1.0029 L12: 0.0446 REMARK 3 L13: 0.1006 L23: -0.0549 REMARK 3 S TENSOR REMARK 3 S11: -0.0061 S12: 0.0264 S13: -0.0188 REMARK 3 S21: 0.0312 S22: 0.0123 S23: -0.1530 REMARK 3 S31: 0.0891 S32: 0.1697 S33: -0.0044 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 309 THROUGH 359 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.7879 39.4844 -10.9956 REMARK 3 T TENSOR REMARK 3 T11: 0.0801 T22: 0.1128 REMARK 3 T33: 0.0979 T12: -0.0007 REMARK 3 T13: -0.0108 T23: 0.0050 REMARK 3 L TENSOR REMARK 3 L11: 1.7717 L22: 1.1166 REMARK 3 L33: 1.1891 L12: -0.9052 REMARK 3 L13: 0.0335 L23: 0.0385 REMARK 3 S TENSOR REMARK 3 S11: 0.0463 S12: 0.2005 S13: 0.0665 REMARK 3 S21: -0.0999 S22: -0.0263 S23: -0.0321 REMARK 3 S31: -0.0061 S32: 0.0855 S33: -0.0100 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8FQU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JAN-23. REMARK 100 THE DEPOSITION ID IS D_1000270530. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUL-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03320 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 81281 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.490 REMARK 200 RESOLUTION RANGE LOW (A) : 86.220 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.0 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.49 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.65 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4U0X REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SPG, 25% W/V PEG 1500, PH 5.0, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 86.21750 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B -1 REMARK 465 GLY B 0 REMARK 465 ASN B 1 REMARK 465 MET A -1 REMARK 465 GLY A 0 REMARK 465 ASN A 1 REMARK 465 LYS A 360 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 193 CG CD CE NZ REMARK 470 ARG B 214 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 217 CG CD1 CD2 REMARK 470 LYS B 304 CG CD CE NZ REMARK 470 LYS B 360 CG CD CE NZ REMARK 470 LYS A 9 CG CD CE NZ REMARK 470 LYS A 10 CG CD CE NZ REMARK 470 GLN A 197 CG CD OE1 NE2 REMARK 470 LYS A 304 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN B 116 53.19 -159.28 REMARK 500 LYS B 126 -52.12 -126.98 REMARK 500 LYS B 141 -79.89 -125.69 REMARK 500 PRO B 216 -159.00 -81.37 REMARK 500 TYR B 223 10.50 -154.39 REMARK 500 ASN B 264 -124.08 53.03 REMARK 500 ASN B 339 32.43 -97.73 REMARK 500 TYR A 112 32.47 70.67 REMARK 500 ASN A 116 54.93 -160.28 REMARK 500 LYS A 126 -53.29 -122.62 REMARK 500 LYS A 141 -71.66 -125.14 REMARK 500 HIS A 186 47.04 -140.46 REMARK 500 TYR A 223 11.13 -157.72 REMARK 500 ASN A 264 -125.83 60.84 REMARK 500 ASN A 339 30.69 -97.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 810 DISTANCE = 5.87 ANGSTROMS REMARK 525 HOH A 912 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH A 913 DISTANCE = 6.03 ANGSTROMS DBREF 8FQU B -1 360 PDB 8FQU 8FQU -1 360 DBREF 8FQU A -1 360 PDB 8FQU 8FQU -1 360 SEQRES 1 B 362 MET GLY ASN THR PRO LYS ASP GLN GLU ILE LYS LYS LEU SEQRES 2 B 362 VAL ASP GLN ASN PHE LYS PRO LEU LEU GLU LYS TYR ASP SEQRES 3 B 362 VAL PRO GLY MET ALA VAL GLY VAL ILE GLN ASN ASN LYS SEQRES 4 B 362 LYS TYR GLU MET TYR TYR GLY LEU GLN SER VAL GLN ASP SEQRES 5 B 362 LYS LYS ALA VAL ASN SER SER THR ILE PHE GLU LEU GLY SEQRES 6 B 362 SER VAL SER LYS LEU PHE THR ALA THR ALA GLY GLY TYR SEQRES 7 B 362 ALA LYS ASN LYS GLY LYS ILE SER PHE ASP ASP THR PRO SEQRES 8 B 362 GLY LYS TYR TRP LYS GLU LEU LYS ASN THR PRO ILE ASP SEQRES 9 B 362 GLN VAL ASN LEU LEU GLN LEU ALA THR TYR THR SER GLY SEQRES 10 B 362 ASN LEU ALA LEU GLN PHE PRO ASP GLU VAL LYS THR ASP SEQRES 11 B 362 GLN GLN VAL LEU THR PHE PHE LYS ASP TRP LYS PRO LYS SEQRES 12 B 362 ASN SER ILE GLY GLU TYR ARG GLN TYR SER ASN PRO SER SEQRES 13 B 362 ILE GLY LEU PHE GLY LYS VAL VAL ALA LEU SER MET ASN SEQRES 14 B 362 LYS PRO PHE ASP GLN VAL LEU GLU LYS THR ILE PHE PRO SEQRES 15 B 362 ALA LEU GLY LEU LYS HIS SER TYR VAL ASN VAL PRO LYS SEQRES 16 B 362 THR GLN MET GLN ASN TYR ALA PHE GLY TYR ASN GLN GLU SEQRES 17 B 362 ASN GLN PRO ILE ARG VAL ASN ARG GLY PRO LEU ASP ALA SEQRES 18 B 362 ALA PRO ALA TYR ASP VAL LYS SER THR LEU PRO ASP MET SEQRES 19 B 362 LEU SER PHE ILE HIS ALA ASN LEU ASN PRO GLN LYS TYR SEQRES 20 B 362 PRO ALA ASP ILE GLN ARG ALA ILE ASN GLU THR HIS GLN SEQRES 21 B 362 GLY ARG TYR GLN VAL ASN THR MET TYR GLN ALA LEU GLY SEQRES 22 B 362 TRP GLU GLU PHE SER TYR PRO ALA THR LEU GLN THR LEU SEQRES 23 B 362 LEU ASP SER ASN SER GLU GLN ILE VAL MET LYS PRO ASN SEQRES 24 B 362 LYS VAL THR ALA ILE SER LYS GLU PRO SER VAL LYS MET SEQRES 25 B 362 TYR HIS LYS THR GLY SER THR ASN GLY PHE GLY THR TYR SEQRES 26 B 362 VAL VAL PHE ILE PRO LYS GLU ASN ILE GLY LEU VAL MET SEQRES 27 B 362 LEU THR ASN LYS ARG ILE PRO ASN GLU GLU ARG ILE LYS SEQRES 28 B 362 ALA ALA TYR ALA VAL LEU ASN ALA ILE LYS LYS SEQRES 1 A 362 MET GLY ASN THR PRO LYS ASP GLN GLU ILE LYS LYS LEU SEQRES 2 A 362 VAL ASP GLN ASN PHE LYS PRO LEU LEU GLU LYS TYR ASP SEQRES 3 A 362 VAL PRO GLY MET ALA VAL GLY VAL ILE GLN ASN ASN LYS SEQRES 4 A 362 LYS TYR GLU MET TYR TYR GLY LEU GLN SER VAL GLN ASP SEQRES 5 A 362 LYS LYS ALA VAL ASN SER SER THR ILE PHE GLU LEU GLY SEQRES 6 A 362 SER VAL SER LYS LEU PHE THR ALA THR ALA GLY GLY TYR SEQRES 7 A 362 ALA LYS ASN LYS GLY LYS ILE SER PHE ASP ASP THR PRO SEQRES 8 A 362 GLY LYS TYR TRP LYS GLU LEU LYS ASN THR PRO ILE ASP SEQRES 9 A 362 GLN VAL ASN LEU LEU GLN LEU ALA THR TYR THR SER GLY SEQRES 10 A 362 ASN LEU ALA LEU GLN PHE PRO ASP GLU VAL LYS THR ASP SEQRES 11 A 362 GLN GLN VAL LEU THR PHE PHE LYS ASP TRP LYS PRO LYS SEQRES 12 A 362 ASN SER ILE GLY GLU TYR ARG GLN TYR SER ASN PRO SER SEQRES 13 A 362 ILE GLY LEU PHE GLY LYS VAL VAL ALA LEU SER MET ASN SEQRES 14 A 362 LYS PRO PHE ASP GLN VAL LEU GLU LYS THR ILE PHE PRO SEQRES 15 A 362 ALA LEU GLY LEU LYS HIS SER TYR VAL ASN VAL PRO LYS SEQRES 16 A 362 THR GLN MET GLN ASN TYR ALA PHE GLY TYR ASN GLN GLU SEQRES 17 A 362 ASN GLN PRO ILE ARG VAL ASN ARG GLY PRO LEU ASP ALA SEQRES 18 A 362 ALA PRO ALA TYR ASP VAL LYS SER THR LEU PRO ASP MET SEQRES 19 A 362 LEU SER PHE ILE HIS ALA ASN LEU ASN PRO GLN LYS TYR SEQRES 20 A 362 PRO ALA ASP ILE GLN ARG ALA ILE ASN GLU THR HIS GLN SEQRES 21 A 362 GLY ARG TYR GLN VAL ASN THR MET TYR GLN ALA LEU GLY SEQRES 22 A 362 TRP GLU GLU PHE SER TYR PRO ALA THR LEU GLN THR LEU SEQRES 23 A 362 LEU ASP SER ASN SER GLU GLN ILE VAL MET LYS PRO ASN SEQRES 24 A 362 LYS VAL THR ALA ILE SER LYS GLU PRO SER VAL LYS MET SEQRES 25 A 362 TYR HIS LYS THR GLY SER THR ASN GLY PHE GLY THR TYR SEQRES 26 A 362 VAL VAL PHE ILE PRO LYS GLU ASN ILE GLY LEU VAL MET SEQRES 27 A 362 LEU THR ASN LYS ARG ILE PRO ASN GLU GLU ARG ILE LYS SEQRES 28 A 362 ALA ALA TYR ALA VAL LEU ASN ALA ILE LYS LYS HET YDB B 401 24 HET DMS B 402 4 HET DMS B 403 4 HET YDB A 401 24 HET DMS A 402 4 HET DMS A 403 4 HETNAM YDB 1-[(2R)-2-{2-[(5-AMINO-1,3,4-THIADIAZOL-2-YL) HETNAM 2 YDB SULFANYL]ACETAMIDO}-2-BORONOETHYL]-1H-1,2,3-TRIAZOLE- HETNAM 3 YDB 4-CARBOXYLIC ACID HETNAM DMS DIMETHYL SULFOXIDE FORMUL 3 YDB 2(C9 H12 B N7 O5 S2) FORMUL 4 DMS 4(C2 H6 O S) FORMUL 9 HOH *723(H2 O) HELIX 1 AA1 THR B 2 PHE B 16 1 15 HELIX 2 AA2 PHE B 16 ASP B 24 1 9 HELIX 3 AA3 VAL B 65 LYS B 80 1 16 HELIX 4 AA4 THR B 88 TYR B 92 5 5 HELIX 5 AA5 TRP B 93 LYS B 97 5 5 HELIX 6 AA6 THR B 99 VAL B 104 5 6 HELIX 7 AA7 ASN B 105 THR B 111 1 7 HELIX 8 AA8 THR B 127 TRP B 138 1 12 HELIX 9 AA9 SER B 151 MET B 166 1 16 HELIX 10 AB1 PRO B 169 THR B 177 1 9 HELIX 11 AB2 THR B 177 LEU B 182 1 6 HELIX 12 AB3 PRO B 192 TYR B 199 5 8 HELIX 13 AB4 ASP B 218 ASP B 224 1 7 HELIX 14 AB5 THR B 228 ASN B 241 1 14 HELIX 15 AB6 PRO B 242 TYR B 245 5 4 HELIX 16 AB7 PRO B 246 THR B 256 1 11 HELIX 17 AB8 THR B 280 SER B 287 1 8 HELIX 18 AB9 SER B 289 LYS B 295 1 7 HELIX 19 AC1 PRO B 328 GLU B 330 5 3 HELIX 20 AC2 PRO B 343 ILE B 358 1 16 HELIX 21 AC3 PRO A 3 PHE A 16 1 14 HELIX 22 AC4 PHE A 16 ASP A 24 1 9 HELIX 23 AC5 VAL A 65 LYS A 80 1 16 HELIX 24 AC6 THR A 88 TYR A 92 5 5 HELIX 25 AC7 TRP A 93 LYS A 97 5 5 HELIX 26 AC8 THR A 99 VAL A 104 5 6 HELIX 27 AC9 ASN A 105 THR A 111 1 7 HELIX 28 AD1 THR A 127 ASP A 137 1 11 HELIX 29 AD2 SER A 151 MET A 166 1 16 HELIX 30 AD3 PRO A 169 THR A 177 1 9 HELIX 31 AD4 THR A 177 LEU A 182 1 6 HELIX 32 AD5 PRO A 192 TYR A 199 5 8 HELIX 33 AD6 PRO A 216 ASP A 218 5 3 HELIX 34 AD7 ALA A 219 ASP A 224 1 6 HELIX 35 AD8 THR A 228 ASN A 241 1 14 HELIX 36 AD9 PRO A 242 TYR A 245 5 4 HELIX 37 AE1 PRO A 246 THR A 256 1 11 HELIX 38 AE2 THR A 280 SER A 287 1 8 HELIX 39 AE3 SER A 289 LYS A 295 1 7 HELIX 40 AE4 PRO A 343 ILE A 358 1 16 SHEET 1 AA1 9 LYS B 52 ALA B 53 0 SHEET 2 AA1 9 LYS B 37 SER B 47 -1 N GLN B 46 O LYS B 52 SHEET 3 AA1 9 GLY B 27 GLN B 34 -1 N VAL B 30 O MET B 41 SHEET 4 AA1 9 ILE B 332 THR B 338 -1 O LEU B 337 N ALA B 29 SHEET 5 AA1 9 PHE B 320 ILE B 327 -1 N ILE B 327 O ILE B 332 SHEET 6 AA1 9 LYS B 309 THR B 317 -1 N GLY B 315 O THR B 322 SHEET 7 AA1 9 GLU B 273 SER B 276 -1 N PHE B 275 O MET B 310 SHEET 8 AA1 9 MET B 266 GLN B 268 -1 N TYR B 267 O GLU B 274 SHEET 9 AA1 9 TYR B 261 VAL B 263 -1 N VAL B 263 O MET B 266 SHEET 1 AA2 2 PHE B 60 GLU B 61 0 SHEET 2 AA2 2 LYS B 226 SER B 227 -1 O SER B 227 N PHE B 60 SHEET 1 AA3 2 TYR B 147 ARG B 148 0 SHEET 2 AA3 2 ASN B 297 LYS B 298 -1 O ASN B 297 N ARG B 148 SHEET 1 AA4 2 GLY B 202 TYR B 203 0 SHEET 2 AA4 2 PRO B 209 ILE B 210 -1 O ILE B 210 N GLY B 202 SHEET 1 AA5 9 LYS A 52 ALA A 53 0 SHEET 2 AA5 9 LYS A 37 SER A 47 -1 N GLN A 46 O LYS A 52 SHEET 3 AA5 9 GLY A 27 GLN A 34 -1 N VAL A 32 O TYR A 39 SHEET 4 AA5 9 ILE A 332 THR A 338 -1 O LEU A 337 N ALA A 29 SHEET 5 AA5 9 PHE A 320 ILE A 327 -1 N TYR A 323 O MET A 336 SHEET 6 AA5 9 LYS A 309 THR A 317 -1 N GLY A 315 O THR A 322 SHEET 7 AA5 9 GLU A 273 SER A 276 -1 N PHE A 275 O MET A 310 SHEET 8 AA5 9 MET A 266 GLN A 268 -1 N TYR A 267 O GLU A 274 SHEET 9 AA5 9 TYR A 261 VAL A 263 -1 N VAL A 263 O MET A 266 SHEET 1 AA6 2 PHE A 60 GLU A 61 0 SHEET 2 AA6 2 LYS A 226 SER A 227 -1 O SER A 227 N PHE A 60 SHEET 1 AA7 2 TYR A 147 ARG A 148 0 SHEET 2 AA7 2 ASN A 297 LYS A 298 -1 O ASN A 297 N ARG A 148 SHEET 1 AA8 2 GLY A 202 TYR A 203 0 SHEET 2 AA8 2 PRO A 209 ILE A 210 -1 O ILE A 210 N GLY A 202 LINK OG SER B 64 B1 YDB B 401 1555 1555 1.41 LINK OG SER A 64 B1 YDB A 401 1555 1555 1.41 CISPEP 1 TYR B 277 PRO B 278 0 3.27 CISPEP 2 TYR A 277 PRO A 278 0 2.31 CRYST1 45.517 172.435 49.470 90.00 111.68 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021970 0.000000 0.008734 0.00000 SCALE2 0.000000 0.005799 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021753 0.00000