HEADER VIRAL PROTEIN 07-JAN-23 8FRK TITLE STRUCTURE OF NSP14 N7-METHYLTRANSFERASE DOMAIN FUSED WITH TELSAM BOUND TITLE 2 TO SGC8158 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTION FACTOR ETV6,GUANINE-N7 METHYLTRANSFERASE COMPND 3 NSP14 CHIMERA; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: ETS TRANSLOCATION VARIANT 6,ETS-RELATED PROTEIN TEL1,TEL, COMPND 6 NON-STRUCTURAL PROTEIN 14,NSP14,PROOFREADING EXORIBONUCLEASE NSP14, COMPND 7 EXON; COMPND 8 EC: 2.1.1.56,3.1.13.-; COMPND 9 ENGINEERED: YES; COMPND 10 MUTATION: YES; COMPND 11 OTHER_DETAILS: FUSION PROTEIN CONTAINING TELSAM (UNIPROT P41212) AND COMPND 12 SARS-COV-2 NSP14 N7-METHYL TRANSFERASE DOMAIN (P0DTD1) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_TAXID: 2697049; SOURCE 5 GENE: ETV6, TEL, TEL1, REP, 1A-1B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS N7-GUANINE METHYL TRANSFERASE, SARS-COV-2, NSP14, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.KOTTUR,A.K.AGGARWAL REVDAT 2 27-SEP-23 8FRK 1 JRNL REVDAT 1 26-JUL-23 8FRK 0 JRNL AUTH J.KOTTUR,K.M.WHITE,M.L.RODRIGUEZ,O.RECHKOBLIT, JRNL AUTH 2 R.QUINTANA-FELICIANO,A.NAYAR,A.GARCIA-SASTRE,A.K.AGGARWAL JRNL TITL STRUCTURES OF SARS-COV-2 N7-METHYLTRANSFERASE WITH DOT1L AND JRNL TITL 2 PRMT7 INHIBITORS PROVIDE A PLATFORM FOR NEW ANTIVIRALS. JRNL REF PLOS PATHOG. V. 19 11546 2023 JRNL REFN ESSN 1553-7374 JRNL PMID 37523415 JRNL DOI 10.1371/JOURNAL.PPAT.1011546 REMARK 2 REMARK 2 RESOLUTION. 1.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20RC3_4406 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.27 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 53.6 REMARK 3 NUMBER OF REFLECTIONS : 23242 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 1182 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.2700 - 3.2100 1.00 5271 267 0.1590 0.2043 REMARK 3 2 3.2100 - 2.5500 1.00 5149 288 0.2482 0.2678 REMARK 3 3 2.5500 - 2.2300 1.00 5150 256 0.2879 0.3177 REMARK 3 4 2.2300 - 2.0200 0.73 3776 180 0.2960 0.3110 REMARK 3 5 2.0200 - 1.8800 0.29 1454 116 0.2835 0.2853 REMARK 3 6 1.8800 - 1.7700 0.15 745 46 0.2887 0.2957 REMARK 3 7 1.7700 - 1.6800 0.07 372 19 0.3403 0.3177 REMARK 3 8 1.6800 - 1.6100 0.03 143 10 0.3554 0.4949 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.224 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 38.072 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.55 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2181 REMARK 3 ANGLE : 0.775 2978 REMARK 3 CHIRALITY : 0.048 317 REMARK 3 PLANARITY : 0.005 376 REMARK 3 DIHEDRAL : 13.121 788 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 8 THROUGH 301 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.9158 14.5552 3.4904 REMARK 3 T TENSOR REMARK 3 T11: 0.2742 T22: 0.2385 REMARK 3 T33: 0.3075 T12: -0.0514 REMARK 3 T13: -0.1034 T23: 0.0371 REMARK 3 L TENSOR REMARK 3 L11: 2.0696 L22: 2.6150 REMARK 3 L33: 0.4571 L12: -0.7077 REMARK 3 L13: -0.0166 L23: -0.0210 REMARK 3 S TENSOR REMARK 3 S11: -0.1066 S12: -0.1563 S13: 0.2591 REMARK 3 S21: -0.0043 S22: -0.1522 S23: -0.1403 REMARK 3 S31: -0.2831 S32: 0.1519 S33: -0.0195 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 302 THROUGH 451 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.1661 15.7099 -10.8584 REMARK 3 T TENSOR REMARK 3 T11: 0.3310 T22: 0.0663 REMARK 3 T33: 0.0674 T12: 0.0428 REMARK 3 T13: 0.0057 T23: 0.0306 REMARK 3 L TENSOR REMARK 3 L11: 0.6074 L22: 1.2317 REMARK 3 L33: 1.4574 L12: 0.0630 REMARK 3 L13: -0.6683 L23: -0.2058 REMARK 3 S TENSOR REMARK 3 S11: 0.0861 S12: -0.0007 S13: 0.0256 REMARK 3 S21: -0.0100 S22: 0.0002 S23: -0.0086 REMARK 3 S31: -0.2209 S32: 0.0514 S33: 0.0151 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 452 THROUGH 523 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.3551 11.5085 6.6253 REMARK 3 T TENSOR REMARK 3 T11: 0.3284 T22: 0.1215 REMARK 3 T33: 0.1083 T12: 0.0752 REMARK 3 T13: 0.0144 T23: 0.0335 REMARK 3 L TENSOR REMARK 3 L11: 1.0820 L22: 1.0332 REMARK 3 L33: 1.4207 L12: 0.1721 REMARK 3 L13: 0.6289 L23: -0.1238 REMARK 3 S TENSOR REMARK 3 S11: 0.0002 S12: -0.1855 S13: -0.1274 REMARK 3 S21: 0.0825 S22: 0.0509 S23: 0.0286 REMARK 3 S31: 0.0490 S32: -0.2243 S33: 0.0100 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8FRK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JAN-23. REMARK 100 THE DEPOSITION ID IS D_1000271230. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-MAR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.1-6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.920105 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS JAN 10, 2022 (BUILT REMARK 200 20220110) REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.7, STARANISO 2.3.79 REMARK 200 (20211010) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23244 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.606 REMARK 200 RESOLUTION RANGE LOW (A) : 94.547 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.61 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 68.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.85100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 11-17% REAGENT ALCOHOL, 0.1-0.3M REMARK 280 LITHIUM SULFATE AND 0.1M SODIUM CITRATE PH 5.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 32.43933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 16.21967 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 24.32950 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 8.10983 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 40.54917 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 SER A 2 REMARK 465 ILE A 3 REMARK 465 ALA A 4 REMARK 465 LEU A 5 REMARK 465 PRO A 6 REMARK 465 THR A 403 REMARK 465 ARG A 404 REMARK 465 VAL A 405 REMARK 465 LEU A 406 REMARK 465 SER A 407 REMARK 465 ASN A 408 REMARK 465 LEU A 409 REMARK 465 ASN A 410 REMARK 465 LEU A 411 REMARK 465 PRO A 412 REMARK 465 GLY A 413 REMARK 465 CYS A 414 REMARK 465 ASP A 415 REMARK 465 GLY A 416 REMARK 465 GLY A 417 REMARK 465 SER A 418 REMARK 465 LEU A 419 REMARK 465 TYR A 420 REMARK 465 VAL A 421 REMARK 465 ASN A 422 REMARK 465 LYS A 423 REMARK 465 HIS A 424 REMARK 465 ALA A 425 REMARK 465 PHE A 426 REMARK 465 HIS A 427 REMARK 465 THR A 428 REMARK 465 PRO A 429 REMARK 465 ALA A 430 REMARK 465 PHE A 431 REMARK 465 ASP A 432 REMARK 465 HIS A 455 REMARK 465 GLY A 456 REMARK 465 LYS A 457 REMARK 465 GLN A 458 REMARK 465 VAL A 459 REMARK 465 VAL A 460 REMARK 465 SER A 461 REMARK 465 ASP A 462 REMARK 465 ILE A 463 REMARK 465 ASP A 464 REMARK 465 TYR A 465 REMARK 465 VAL A 466 REMARK 465 PRO A 467 REMARK 465 THR A 524 REMARK 465 ARG A 525 REMARK 465 LEU A 526 REMARK 465 GLN A 527 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 10 CD NE CZ NH1 NH2 REMARK 470 ARG A 18 NE CZ NH1 NH2 REMARK 470 ASP A 19 CG OD1 OD2 REMARK 470 GLN A 23 CG CD OE1 NE2 REMARK 470 LYS A 26 CG CD CE NZ REMARK 470 ASN A 30 CG OD1 ND2 REMARK 470 ARG A 35 NE CZ NH1 NH2 REMARK 470 ILE A 37 CG1 CG2 CD1 REMARK 470 SER A 39 OG REMARK 470 ASN A 40 CG OD1 ND2 REMARK 470 GLU A 43 CG CD OE1 OE2 REMARK 470 GLN A 78 CG CD OE1 NE2 REMARK 470 GLN A 343 CG CD OE1 NE2 REMARK 470 LYS A 376 NZ REMARK 470 LYS A 433 CD CE NZ REMARK 470 LYS A 469 CG CD CE NZ REMARK 470 ARG A 485 CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 891 O HOH A 895 2.13 REMARK 500 O HOH A 784 O HOH A 802 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 768 O HOH A 906 2654 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 64 13.61 -162.47 REMARK 500 ASN A 395 65.64 -100.46 REMARK 500 SER A 470 141.34 -173.30 REMARK 500 ALA A 482 71.35 -118.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 939 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH A 940 DISTANCE = 5.99 ANGSTROMS REMARK 525 HOH A 941 DISTANCE = 6.04 ANGSTROMS REMARK 525 HOH A 942 DISTANCE = 6.06 ANGSTROMS REMARK 525 HOH A 943 DISTANCE = 6.16 ANGSTROMS REMARK 525 HOH A 944 DISTANCE = 6.84 ANGSTROMS REMARK 525 HOH A 945 DISTANCE = 6.98 ANGSTROMS REMARK 525 HOH A 946 DISTANCE = 8.82 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 604 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 376 O REMARK 620 2 PHE A 377 O 68.0 REMARK 620 3 ASN A 395 OD1 139.5 71.6 REMARK 620 4 HOH A 728 O 70.5 116.1 128.9 REMARK 620 5 HOH A 752 O 109.0 141.6 103.4 97.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 452 SG REMARK 620 2 CYS A 477 SG 112.5 REMARK 620 3 CYS A 484 SG 118.5 112.4 REMARK 620 4 HIS A 487 ND1 106.7 108.4 96.3 REMARK 620 N 1 2 3 DBREF 8FRK A 2 78 UNP P41212 ETV6_HUMAN 47 123 DBREF 8FRK A 300 508 UNP P0DTD1 R1AB_SARS2 6225 6433 SEQADV 8FRK GLY A 1 UNP P41212 EXPRESSION TAG SEQADV 8FRK ALA A 4 UNP P41212 ARG 49 ENGINEERED MUTATION SEQADV 8FRK GLU A 67 UNP P41212 VAL 112 ENGINEERED MUTATION SEQADV 8FRK ALA A 77 UNP P41212 LYS 122 ENGINEERED MUTATION SEQADV 8FRK PRO A 79 UNP P41212 LINKER SEQADV 8FRK ALA A 80 UNP P41212 LINKER SEQADV 8FRK ALA A 81 UNP P41212 LINKER SEQADV 8FRK TRP A 509 UNP P0DTD1 EXPRESSION TAG SEQADV 8FRK VAL A 510 UNP P0DTD1 EXPRESSION TAG SEQADV 8FRK TYR A 511 UNP P0DTD1 EXPRESSION TAG SEQADV 8FRK LYS A 512 UNP P0DTD1 EXPRESSION TAG SEQADV 8FRK GLN A 513 UNP P0DTD1 EXPRESSION TAG SEQADV 8FRK PHE A 514 UNP P0DTD1 EXPRESSION TAG SEQADV 8FRK ASP A 515 UNP P0DTD1 EXPRESSION TAG SEQADV 8FRK THR A 516 UNP P0DTD1 EXPRESSION TAG SEQADV 8FRK TYR A 517 UNP P0DTD1 EXPRESSION TAG SEQADV 8FRK ASN A 518 UNP P0DTD1 EXPRESSION TAG SEQADV 8FRK LEU A 519 UNP P0DTD1 EXPRESSION TAG SEQADV 8FRK TRP A 520 UNP P0DTD1 EXPRESSION TAG SEQADV 8FRK ASN A 521 UNP P0DTD1 EXPRESSION TAG SEQADV 8FRK THR A 522 UNP P0DTD1 EXPRESSION TAG SEQADV 8FRK PHE A 523 UNP P0DTD1 EXPRESSION TAG SEQADV 8FRK THR A 524 UNP P0DTD1 EXPRESSION TAG SEQADV 8FRK ARG A 525 UNP P0DTD1 EXPRESSION TAG SEQADV 8FRK LEU A 526 UNP P0DTD1 EXPRESSION TAG SEQADV 8FRK GLN A 527 UNP P0DTD1 EXPRESSION TAG SEQRES 1 A 309 GLY SER ILE ALA LEU PRO ALA HIS LEU ARG LEU GLN PRO SEQRES 2 A 309 ILE TYR TRP SER ARG ASP ASP VAL ALA GLN TRP LEU LYS SEQRES 3 A 309 TRP ALA GLU ASN GLU PHE SER LEU ARG PRO ILE ASP SER SEQRES 4 A 309 ASN THR PHE GLU MET ASN GLY LYS ALA LEU LEU LEU LEU SEQRES 5 A 309 THR LYS GLU ASP PHE ARG TYR ARG SER PRO HIS SER GLY SEQRES 6 A 309 ASP GLU LEU TYR GLU LEU LEU GLN HIS ILE LEU ALA GLN SEQRES 7 A 309 PRO ALA ALA GLY ASP GLU LEU LYS ILE ASN ALA ALA CYS SEQRES 8 A 309 ARG LYS VAL GLN HIS MET VAL VAL LYS ALA ALA LEU LEU SEQRES 9 A 309 ALA ASP LYS PHE PRO VAL LEU HIS ASP ILE GLY ASN PRO SEQRES 10 A 309 LYS ALA ILE LYS CYS VAL PRO GLN ALA ASP VAL GLU TRP SEQRES 11 A 309 LYS PHE TYR ASP ALA GLN PRO CYS SER ASP LYS ALA TYR SEQRES 12 A 309 LYS ILE GLU GLU LEU PHE TYR SER TYR ALA THR HIS SER SEQRES 13 A 309 ASP LYS PHE THR ASP GLY VAL CYS LEU PHE TRP ASN CYS SEQRES 14 A 309 ASN VAL ASP ARG TYR PRO ALA ASN SER ILE VAL CYS ARG SEQRES 15 A 309 PHE ASP THR ARG VAL LEU SER ASN LEU ASN LEU PRO GLY SEQRES 16 A 309 CYS ASP GLY GLY SER LEU TYR VAL ASN LYS HIS ALA PHE SEQRES 17 A 309 HIS THR PRO ALA PHE ASP LYS SER ALA PHE VAL ASN LEU SEQRES 18 A 309 LYS GLN LEU PRO PHE PHE TYR TYR SER ASP SER PRO CYS SEQRES 19 A 309 GLU SER HIS GLY LYS GLN VAL VAL SER ASP ILE ASP TYR SEQRES 20 A 309 VAL PRO LEU LYS SER ALA THR CYS ILE THR ARG CYS ASN SEQRES 21 A 309 LEU GLY GLY ALA VAL CYS ARG HIS HIS ALA ASN GLU TYR SEQRES 22 A 309 ARG LEU TYR LEU ASP ALA TYR ASN MET MET ILE SER ALA SEQRES 23 A 309 GLY PHE SER LEU TRP VAL TYR LYS GLN PHE ASP THR TYR SEQRES 24 A 309 ASN LEU TRP ASN THR PHE THR ARG LEU GLN HET ZN A 601 1 HET EOH A 602 3 HET MJ7 A 603 38 HET K A 604 1 HETNAM ZN ZINC ION HETNAM EOH ETHANOL HETNAM MJ7 5'-S-(4-{[(4'-CHLORO[1,1'-BIPHENYL]-3-YL) HETNAM 2 MJ7 METHYL]AMINO}BUTYL)-5'-THIOADENOSINE HETNAM K POTASSIUM ION FORMUL 2 ZN ZN 2+ FORMUL 3 EOH C2 H6 O FORMUL 4 MJ7 C27 H31 CL N6 O3 S FORMUL 5 K K 1+ FORMUL 6 HOH *246(H2 O) HELIX 1 AA1 ALA A 7 LEU A 11 5 5 HELIX 2 AA2 GLN A 12 TRP A 16 5 5 HELIX 3 AA3 SER A 17 PHE A 32 1 16 HELIX 4 AA4 ASP A 38 GLU A 43 5 6 HELIX 5 AA5 ASN A 45 LEU A 50 1 6 HELIX 6 AA6 THR A 53 SER A 61 1 9 HELIX 7 AA7 SER A 64 GLN A 78 1 15 HELIX 8 AA8 ASP A 301 LYS A 325 1 25 HELIX 9 AA9 LYS A 359 ILE A 363 5 5 HELIX 10 AB1 SER A 369 SER A 374 1 6 HELIX 11 AB2 LYS A 433 VAL A 437 5 5 HELIX 12 AB3 THR A 475 LEU A 479 5 5 HELIX 13 AB4 CYS A 484 ALA A 504 1 21 HELIX 14 AB5 THR A 516 ASN A 521 1 6 SHEET 1 AA1 7 GLU A 364 GLU A 365 0 SHEET 2 AA1 7 GLU A 347 ASP A 352 1 N PHE A 350 O GLU A 364 SHEET 3 AA1 7 VAL A 328 ILE A 332 1 N ASP A 331 O LYS A 349 SHEET 4 AA1 7 VAL A 381 TRP A 385 1 O VAL A 381 N HIS A 330 SHEET 5 AA1 7 SER A 396 PHE A 401 1 O ILE A 397 N PHE A 384 SHEET 6 AA1 7 PHE A 506 TYR A 511 -1 O TRP A 509 N VAL A 398 SHEET 7 AA1 7 LEU A 439 GLN A 441 -1 N LYS A 440 O VAL A 510 SHEET 1 AA2 2 TYR A 446 TYR A 447 0 SHEET 2 AA2 2 CYS A 473 ILE A 474 1 O ILE A 474 N TYR A 446 LINK O LYS A 376 K K A 604 1555 1555 2.85 LINK O PHE A 377 K K A 604 1555 1555 3.27 LINK OD1 ASN A 395 K K A 604 1555 1555 3.19 LINK SG CYS A 452 ZN ZN A 601 1555 1555 2.30 LINK SG CYS A 477 ZN ZN A 601 1555 1555 2.30 LINK SG CYS A 484 ZN ZN A 601 1555 1555 2.28 LINK ND1 HIS A 487 ZN ZN A 601 1555 1555 2.14 LINK K K A 604 O HOH A 728 1555 1555 2.86 LINK K K A 604 O HOH A 752 1555 1555 2.58 CRYST1 109.174 109.174 48.659 90.00 90.00 120.00 P 65 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009160 0.005288 0.000000 0.00000 SCALE2 0.000000 0.010577 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020551 0.00000