HEADER CELL CYCLE 23-JAN-23 8FWP TITLE CRYSTAL STRUCTURE OF CDC10 - CDC3 HETEROCOMPLEX FROM SACCHAROMYCES TITLE 2 CEREVISIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELL DIVISION CONTROL PROTEIN 10; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: CELL DIVISION CONTROL PROTEIN 3; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 3 S288C); SOURCE 4 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 5 ORGANISM_TAXID: 559292; SOURCE 6 STRAIN: ATCC 204508 / S288C; SOURCE 7 GENE: CDC10, YCR002C, YCR022, YCR2C; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 10 EXPRESSION_SYSTEM_VARIANT: ROSETTA; SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PETDUET; SOURCE 13 MOL_ID: 2; SOURCE 14 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 15 S288C); SOURCE 16 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 17 ORGANISM_TAXID: 559292; SOURCE 18 STRAIN: ATCC 204508 / S288C; SOURCE 19 GENE: CDC3, YLR314C, L8543.7; SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 21 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 22 EXPRESSION_SYSTEM_VARIANT: ROSETTA; SOURCE 23 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 24 EXPRESSION_SYSTEM_PLASMID: PETDUET KEYWDS SEPTIN, CELL CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR R.M.SILVA,D.A.LEONARDO,H.M.PEREIRA,R.C.GARRATT REVDAT 1 05-JUL-23 8FWP 0 JRNL AUTH R.MARQUES DA SILVA,G.CHRISTE DOS REIS SALADINO, JRNL AUTH 2 D.ANTONIO LEONARDO,H.D'MUNIZ PEREIRA,S.ANDREA SCULACCIO, JRNL AUTH 3 A.PAULA ULIAN ARAUJO,R.CHARLES GARRATT JRNL TITL A KEY PIECE OF THE PUZZLE: THE CENTRAL TETRAMER OF THE JRNL TITL 2 SACCHAROMYCES CEREVISIAE SEPTIN PROTOFILAMENT AND ITS JRNL TITL 3 IMPLICATIONS FOR SELF-ASSEMBLY. JRNL REF J.STRUCT.BIOL. V. 215 07983 2023 JRNL REFN ESSN 1095-8657 JRNL PMID 37315820 JRNL DOI 10.1016/J.JSB.2023.107983 REMARK 2 REMARK 2 RESOLUTION. 2.22 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.22 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.03 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 39645 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1982 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.0300 - 5.3400 1.00 2942 155 0.1743 0.1960 REMARK 3 2 5.3400 - 4.2400 1.00 2763 146 0.1394 0.1625 REMARK 3 3 4.2400 - 3.7100 1.00 2734 144 0.1583 0.1768 REMARK 3 4 3.7100 - 3.3700 1.00 2698 142 0.1807 0.2108 REMARK 3 5 3.3700 - 3.1300 1.00 2698 142 0.2058 0.2941 REMARK 3 6 3.1300 - 2.9400 1.00 2671 140 0.2197 0.2650 REMARK 3 7 2.9400 - 2.7900 1.00 2663 141 0.2075 0.2185 REMARK 3 8 2.7900 - 2.6700 1.00 2663 140 0.2117 0.2624 REMARK 3 9 2.6700 - 2.5700 1.00 2648 139 0.2355 0.2937 REMARK 3 10 2.5700 - 2.4800 1.00 2662 140 0.2623 0.3408 REMARK 3 11 2.4800 - 2.4000 1.00 2622 138 0.2669 0.3483 REMARK 3 12 2.4000 - 2.3300 1.00 2637 139 0.2641 0.2803 REMARK 3 13 2.3300 - 2.2700 1.00 2628 138 0.2683 0.3402 REMARK 3 14 2.2700 - 2.2200 0.99 2634 138 0.3056 0.3772 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.960 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4342 REMARK 3 ANGLE : 0.951 5881 REMARK 3 CHIRALITY : 0.057 666 REMARK 3 PLANARITY : 0.009 746 REMARK 3 DIHEDRAL : 16.696 1634 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 31 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.9330 -41.7867 22.1369 REMARK 3 T TENSOR REMARK 3 T11: 0.2674 T22: 0.2988 REMARK 3 T33: 0.3062 T12: 0.0067 REMARK 3 T13: 0.0104 T23: -0.0062 REMARK 3 L TENSOR REMARK 3 L11: 8.0462 L22: 5.4284 REMARK 3 L33: 6.1203 L12: -0.8763 REMARK 3 L13: -1.2193 L23: -0.4378 REMARK 3 S TENSOR REMARK 3 S11: -0.0964 S12: -0.3053 S13: 0.0169 REMARK 3 S21: 0.2423 S22: 0.0500 S23: -0.1830 REMARK 3 S31: -0.1140 S32: -0.0595 S33: 0.0436 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 66 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.7678 -48.8015 19.4231 REMARK 3 T TENSOR REMARK 3 T11: 0.3316 T22: 0.3044 REMARK 3 T33: 0.3122 T12: -0.0183 REMARK 3 T13: 0.0079 T23: -0.0136 REMARK 3 L TENSOR REMARK 3 L11: 1.2084 L22: 6.6559 REMARK 3 L33: 1.4054 L12: -0.8866 REMARK 3 L13: -0.1801 L23: 0.7351 REMARK 3 S TENSOR REMARK 3 S11: -0.1300 S12: -0.0617 S13: 0.0833 REMARK 3 S21: -0.0989 S22: 0.2212 S23: -0.5113 REMARK 3 S31: 0.1307 S32: 0.0656 S33: -0.0845 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 145 THROUGH 252 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.0034 -40.3244 6.6215 REMARK 3 T TENSOR REMARK 3 T11: 0.5236 T22: 0.3437 REMARK 3 T33: 0.3420 T12: -0.0781 REMARK 3 T13: -0.0993 T23: -0.0540 REMARK 3 L TENSOR REMARK 3 L11: 3.2886 L22: 4.1656 REMARK 3 L33: 3.1368 L12: -0.9208 REMARK 3 L13: 0.2601 L23: 0.6926 REMARK 3 S TENSOR REMARK 3 S11: -0.0312 S12: 0.3398 S13: -0.2332 REMARK 3 S21: -0.8677 S22: -0.0583 S23: 0.4321 REMARK 3 S31: 0.1264 S32: -0.2824 S33: 0.1374 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 253 THROUGH 302 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.2365 -48.8495 11.2230 REMARK 3 T TENSOR REMARK 3 T11: 0.4774 T22: 0.3027 REMARK 3 T33: 0.3463 T12: -0.0595 REMARK 3 T13: -0.0623 T23: 0.0051 REMARK 3 L TENSOR REMARK 3 L11: 5.3573 L22: 7.3115 REMARK 3 L33: 1.4244 L12: -4.9638 REMARK 3 L13: -1.4068 L23: 1.9333 REMARK 3 S TENSOR REMARK 3 S11: 0.1328 S12: 0.2812 S13: -0.5240 REMARK 3 S21: -0.6456 S22: -0.2621 S23: 0.8989 REMARK 3 S31: 0.1453 S32: -0.2264 S33: 0.1673 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 118 THROUGH 182 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.9208 -9.9851 4.1093 REMARK 3 T TENSOR REMARK 3 T11: 0.7761 T22: 0.3821 REMARK 3 T33: 0.4157 T12: 0.0492 REMARK 3 T13: -0.1048 T23: -0.0004 REMARK 3 L TENSOR REMARK 3 L11: 1.6010 L22: 4.6706 REMARK 3 L33: 1.4549 L12: -0.2050 REMARK 3 L13: 0.5061 L23: -0.2139 REMARK 3 S TENSOR REMARK 3 S11: -0.0591 S12: 0.2804 S13: 0.3918 REMARK 3 S21: -1.0366 S22: 0.0852 S23: 0.2088 REMARK 3 S31: -0.2867 S32: -0.1265 S33: -0.0266 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 183 THROUGH 215 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.0346 -8.5097 4.1291 REMARK 3 T TENSOR REMARK 3 T11: 0.8097 T22: 0.4509 REMARK 3 T33: 0.4547 T12: -0.0176 REMARK 3 T13: -0.0672 T23: -0.0288 REMARK 3 L TENSOR REMARK 3 L11: 5.2811 L22: 5.9050 REMARK 3 L33: 6.1484 L12: -2.1988 REMARK 3 L13: 1.5806 L23: -2.9847 REMARK 3 S TENSOR REMARK 3 S11: -0.1586 S12: 0.0620 S13: -0.0398 REMARK 3 S21: -1.0548 S22: 0.3499 S23: 0.4050 REMARK 3 S31: -0.5371 S32: -0.7417 S33: -0.1915 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 216 THROUGH 251 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.8075 1.7215 6.7814 REMARK 3 T TENSOR REMARK 3 T11: 0.7777 T22: 0.3668 REMARK 3 T33: 0.3918 T12: 0.0095 REMARK 3 T13: 0.0958 T23: -0.0471 REMARK 3 L TENSOR REMARK 3 L11: 3.3298 L22: 7.7051 REMARK 3 L33: 1.0136 L12: 4.6974 REMARK 3 L13: -1.1089 L23: -0.4658 REMARK 3 S TENSOR REMARK 3 S11: -0.1609 S12: 0.2254 S13: 0.0160 REMARK 3 S21: -1.5917 S22: 0.2624 S23: -0.5811 REMARK 3 S31: -0.0680 S32: 0.0651 S33: -0.0495 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 252 THROUGH 368 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.5980 -16.0847 19.0073 REMARK 3 T TENSOR REMARK 3 T11: 0.4102 T22: 0.2911 REMARK 3 T33: 0.3684 T12: 0.0548 REMARK 3 T13: -0.0682 T23: -0.0703 REMARK 3 L TENSOR REMARK 3 L11: 3.0131 L22: 3.6966 REMARK 3 L33: 1.2813 L12: 1.3098 REMARK 3 L13: 0.3486 L23: 0.1951 REMARK 3 S TENSOR REMARK 3 S11: -0.0951 S12: -0.0404 S13: 0.3254 REMARK 3 S21: -0.1745 S22: -0.0594 S23: 0.5328 REMARK 3 S31: -0.2877 S32: -0.2465 S33: 0.1733 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 369 THROUGH 409 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.7057 -0.9617 16.8809 REMARK 3 T TENSOR REMARK 3 T11: 0.6094 T22: 0.3548 REMARK 3 T33: 0.4730 T12: 0.0650 REMARK 3 T13: -0.0300 T23: -0.0646 REMARK 3 L TENSOR REMARK 3 L11: 9.1326 L22: 9.1179 REMARK 3 L33: 0.7963 L12: 7.5366 REMARK 3 L13: -0.4412 L23: 0.0177 REMARK 3 S TENSOR REMARK 3 S11: 0.2976 S12: -0.0941 S13: 0.8205 REMARK 3 S21: -0.1784 S22: -0.2037 S23: 1.0265 REMARK 3 S31: -0.3483 S32: -0.1404 S33: -0.1065 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8FWP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-JAN-23. REMARK 100 THE DEPOSITION ID IS D_1000271603. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-SEP-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS SIRIUS REMARK 200 BEAMLINE : MANACA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97718 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39667 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.220 REMARK 200 RESOLUTION RANGE LOW (A) : 46.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 26.00 REMARK 200 R MERGE (I) : 0.29700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.9900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.22 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.35 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 3.57000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM FORMATE 0.1 M BIS-TRIS REMARK 280 PROPANE 6.5 20 % W/V PEG 3350, PH 6.5, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 283K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+1/4 REMARK 290 8555 -Y,-X,-Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 110.13100 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 165.19650 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 55.06550 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 110.13100 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 55.06550 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 165.19650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 24 REMARK 465 ALA A 25 REMARK 465 ASP A 26 REMARK 465 LEU A 27 REMARK 465 ASN A 28 REMARK 465 CYS A 29 REMARK 465 GLY A 30 REMARK 465 GLU A 86 REMARK 465 ASP A 87 REMARK 465 ARG A 88 REMARK 465 MET B 105 REMARK 465 GLY B 106 REMARK 465 SER B 107 REMARK 465 SER B 108 REMARK 465 HIS B 109 REMARK 465 HIS B 110 REMARK 465 HIS B 111 REMARK 465 HIS B 112 REMARK 465 HIS B 113 REMARK 465 HIS B 114 REMARK 465 SER B 115 REMARK 465 GLN B 116 REMARK 465 ASP B 117 REMARK 465 ASP B 152 REMARK 465 TYR B 153 REMARK 465 GLU B 154 REMARK 465 GLU B 155 REMARK 465 GLU B 156 REMARK 465 LEU B 157 REMARK 465 ALA B 158 REMARK 465 ASN B 159 REMARK 465 ASP B 160 REMARK 465 GLN B 161 REMARK 465 GLU B 162 REMARK 465 GLU B 163 REMARK 465 GLU B 164 REMARK 465 GLU B 165 REMARK 465 GLY B 166 REMARK 465 GLN B 167 REMARK 465 GLY B 168 REMARK 465 GLU B 169 REMARK 465 GLY B 170 REMARK 465 HIS B 171 REMARK 465 GLU B 172 REMARK 465 ASN B 173 REMARK 465 GLN B 174 REMARK 465 SER B 175 REMARK 465 GLN B 176 REMARK 465 GLU B 177 REMARK 465 GLN B 178 REMARK 465 ARG B 179 REMARK 465 ILE B 319 REMARK 465 TYR B 320 REMARK 465 SER B 321 REMARK 465 ASN B 322 REMARK 465 ASP B 323 REMARK 465 ASP B 324 REMARK 465 ALA B 325 REMARK 465 GLU B 326 REMARK 465 ASN B 327 REMARK 465 SER B 328 REMARK 465 HIS B 329 REMARK 465 LEU B 330 REMARK 465 SER B 331 REMARK 465 GLU B 332 REMARK 465 ARG B 333 REMARK 465 ALA B 410 REMARK 465 LYS B 411 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 151 CG CD CE NZ REMARK 470 HIS B 180 CG ND1 CD2 CE1 NE2 REMARK 470 TYR B 352 CG CD1 CD2 CE1 CE2 CZ OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 510 O HOH A 586 2.03 REMARK 500 OE1 GLU A 129 O HOH A 501 2.04 REMARK 500 O HOH B 651 O HOH B 664 2.04 REMARK 500 O HOH B 667 O HOH B 669 2.06 REMARK 500 O HOH B 653 O HOH B 665 2.10 REMARK 500 OD2 ASP A 161 O HOH A 502 2.16 REMARK 500 OE2 GLU A 129 O HOH A 503 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 133 58.57 -97.22 REMARK 500 SER A 237 133.45 -170.03 REMARK 500 TRP A 255 -2.64 -146.49 REMARK 500 ARG A 277 -68.47 -107.97 REMARK 500 ILE A 290 -63.89 -106.28 REMARK 500 GLU B 146 44.41 -106.04 REMARK 500 ASN B 214 57.20 -93.53 REMARK 500 HIS B 262 -87.62 -95.68 REMARK 500 SER B 345 120.06 -175.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 133 OG1 REMARK 620 2 GTP B 501 O1G 169.0 REMARK 620 3 GTP B 501 O2B 86.7 83.2 REMARK 620 4 HOH B 608 O 91.0 94.0 94.4 REMARK 620 5 HOH B 615 O 86.5 87.4 79.1 173.1 REMARK 620 6 HOH B 633 O 85.5 104.0 170.2 91.8 94.4 REMARK 620 N 1 2 3 4 5 DBREF 8FWP A 30 302 UNP P25342 CDC10_YEAST 30 302 DBREF 8FWP B 119 411 UNP P32457 CDC3_YEAST 119 411 SEQADV 8FWP MET A 24 UNP P25342 INITIATING METHIONINE SEQADV 8FWP ALA A 25 UNP P25342 EXPRESSION TAG SEQADV 8FWP ASP A 26 UNP P25342 EXPRESSION TAG SEQADV 8FWP LEU A 27 UNP P25342 EXPRESSION TAG SEQADV 8FWP ASN A 28 UNP P25342 EXPRESSION TAG SEQADV 8FWP CYS A 29 UNP P25342 EXPRESSION TAG SEQADV 8FWP MET B 105 UNP P32457 INITIATING METHIONINE SEQADV 8FWP GLY B 106 UNP P32457 EXPRESSION TAG SEQADV 8FWP SER B 107 UNP P32457 EXPRESSION TAG SEQADV 8FWP SER B 108 UNP P32457 EXPRESSION TAG SEQADV 8FWP HIS B 109 UNP P32457 EXPRESSION TAG SEQADV 8FWP HIS B 110 UNP P32457 EXPRESSION TAG SEQADV 8FWP HIS B 111 UNP P32457 EXPRESSION TAG SEQADV 8FWP HIS B 112 UNP P32457 EXPRESSION TAG SEQADV 8FWP HIS B 113 UNP P32457 EXPRESSION TAG SEQADV 8FWP HIS B 114 UNP P32457 EXPRESSION TAG SEQADV 8FWP SER B 115 UNP P32457 EXPRESSION TAG SEQADV 8FWP GLN B 116 UNP P32457 EXPRESSION TAG SEQADV 8FWP ASP B 117 UNP P32457 EXPRESSION TAG SEQADV 8FWP PRO B 118 UNP P32457 EXPRESSION TAG SEQRES 1 A 279 MET ALA ASP LEU ASN CYS GLY PHE GLN PHE ASN ILE MET SEQRES 2 A 279 VAL VAL GLY GLN SER GLY LEU GLY LYS SER THR LEU ILE SEQRES 3 A 279 ASN THR LEU PHE ALA SER HIS LEU ILE ASP SER ALA THR SEQRES 4 A 279 GLY ASP ASP ILE SER ALA LEU PRO VAL THR LYS THR THR SEQRES 5 A 279 GLU MET LYS ILE SER THR HIS THR LEU VAL GLU ASP ARG SEQRES 6 A 279 VAL ARG LEU ASN ILE ASN VAL ILE ASP THR PRO GLY PHE SEQRES 7 A 279 GLY ASP PHE ILE ASP ASN SER LYS ALA TRP GLU PRO ILE SEQRES 8 A 279 VAL LYS TYR ILE LYS GLU GLN HIS SER GLN TYR LEU ARG SEQRES 9 A 279 LYS GLU LEU THR ALA GLN ARG GLU ARG PHE ILE THR ASP SEQRES 10 A 279 THR ARG VAL HIS ALA ILE LEU TYR PHE LEU GLN PRO ASN SEQRES 11 A 279 GLY LYS GLU LEU SER ARG LEU ASP VAL GLU ALA LEU LYS SEQRES 12 A 279 ARG LEU THR GLU ILE ALA ASN VAL ILE PRO VAL ILE GLY SEQRES 13 A 279 LYS SER ASP THR LEU THR LEU ASP GLU ARG THR GLU PHE SEQRES 14 A 279 ARG GLU LEU ILE GLN ASN GLU PHE GLU LYS TYR ASN PHE SEQRES 15 A 279 LYS ILE TYR PRO TYR ASP SER GLU GLU LEU THR ASP GLU SEQRES 16 A 279 GLU LEU GLU LEU ASN ARG SER VAL ARG SER ILE ILE PRO SEQRES 17 A 279 PHE ALA VAL VAL GLY SER GLU ASN GLU ILE GLU ILE ASN SEQRES 18 A 279 GLY GLU THR PHE ARG GLY ARG LYS THR ARG TRP SER ALA SEQRES 19 A 279 ILE ASN VAL GLU ASP ILE ASN GLN CYS ASP PHE VAL TYR SEQRES 20 A 279 LEU ARG GLU PHE LEU ILE ARG THR HIS LEU GLN ASP LEU SEQRES 21 A 279 ILE GLU THR THR SER TYR ILE HIS TYR GLU GLY PHE ARG SEQRES 22 A 279 ALA ARG GLN LEU ILE ALA SEQRES 1 B 307 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ASP SEQRES 2 B 307 PRO SER PHE ASN LEU LEU CYS VAL GLY PRO ASP GLY ILE SEQRES 3 B 307 GLY LYS THR THR LEU MET LYS THR LEU PHE ASN ASN ASP SEQRES 4 B 307 ASP ILE GLU ALA ASN LEU VAL LYS ASP TYR GLU GLU GLU SEQRES 5 B 307 LEU ALA ASN ASP GLN GLU GLU GLU GLU GLY GLN GLY GLU SEQRES 6 B 307 GLY HIS GLU ASN GLN SER GLN GLU GLN ARG HIS LYS VAL SEQRES 7 B 307 LYS ILE LYS SER TYR GLU SER VAL ILE GLU GLU ASN GLY SEQRES 8 B 307 VAL LYS LEU ASN LEU ASN VAL ILE ASP THR GLU GLY PHE SEQRES 9 B 307 GLY ASP PHE LEU ASN ASN ASP GLN LYS SER TRP ASP PRO SEQRES 10 B 307 ILE ILE LYS GLU ILE ASP SER ARG PHE ASP GLN TYR LEU SEQRES 11 B 307 ASP ALA GLU ASN LYS ILE ASN ARG HIS SER ILE ASN ASP SEQRES 12 B 307 LYS ARG ILE HIS ALA CYS LEU TYR PHE ILE GLU PRO THR SEQRES 13 B 307 GLY HIS TYR LEU LYS PRO LEU ASP LEU LYS PHE MET GLN SEQRES 14 B 307 SER VAL TYR GLU LYS CYS ASN LEU ILE PRO VAL ILE ALA SEQRES 15 B 307 LYS SER ASP ILE LEU THR ASP GLU GLU ILE LEU SER PHE SEQRES 16 B 307 LYS LYS THR ILE MET ASN GLN LEU ILE GLN SER ASN ILE SEQRES 17 B 307 GLU LEU PHE LYS PRO PRO ILE TYR SER ASN ASP ASP ALA SEQRES 18 B 307 GLU ASN SER HIS LEU SER GLU ARG LEU PHE SER SER LEU SEQRES 19 B 307 PRO TYR ALA VAL ILE GLY SER ASN ASP ILE VAL GLU ASN SEQRES 20 B 307 TYR SER GLY ASN GLN VAL ARG GLY ARG SER TYR PRO TRP SEQRES 21 B 307 GLY VAL ILE GLU VAL ASP ASN ASP ASN HIS SER ASP PHE SEQRES 22 B 307 ASN LEU LEU LYS ASN LEU LEU ILE LYS GLN PHE MET GLU SEQRES 23 B 307 GLU LEU LYS GLU ARG THR SER LYS ILE LEU TYR GLU ASN SEQRES 24 B 307 TYR ARG SER SER LYS LEU ALA LYS HET GDP A 401 28 HET GTP B 501 32 HET MG B 502 1 HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 3 GDP C10 H15 N5 O11 P2 FORMUL 4 GTP C10 H16 N5 O14 P3 FORMUL 5 MG MG 2+ FORMUL 6 HOH *183(H2 O) HELIX 1 AA1 GLY A 44 ALA A 54 1 11 HELIX 2 AA2 ASP A 65 LEU A 69 5 5 HELIX 3 AA3 TRP A 111 THR A 131 1 21 HELIX 4 AA4 SER A 158 THR A 169 1 12 HELIX 5 AA5 LYS A 180 LEU A 184 5 5 HELIX 6 AA6 THR A 185 TYR A 203 1 19 HELIX 7 AA7 THR A 216 SER A 228 1 13 HELIX 8 AA8 ASP A 267 ARG A 277 1 11 HELIX 9 AA9 HIS A 279 ILE A 290 1 12 HELIX 10 AB1 ILE A 290 ALA A 302 1 13 HELIX 11 AB2 GLY B 131 PHE B 140 1 10 HELIX 12 AB3 ASP B 215 LYS B 239 1 25 HELIX 13 AB4 LYS B 265 TYR B 276 1 12 HELIX 14 AB5 LYS B 287 LEU B 291 5 5 HELIX 15 AB6 THR B 292 SER B 310 1 19 HELIX 16 AB7 LEU B 334 LEU B 338 5 5 HELIX 17 AB8 ASP B 376 ILE B 385 1 10 HELIX 18 AB9 PHE B 388 ILE B 399 1 12 HELIX 19 AC1 ILE B 399 LEU B 409 1 11 SHEET 1 AA1 6 LYS A 78 LEU A 84 0 SHEET 2 AA1 6 LEU A 91 ASP A 97 -1 O ILE A 93 N HIS A 82 SHEET 3 AA1 6 GLN A 32 VAL A 38 1 N VAL A 37 O ILE A 96 SHEET 4 AA1 6 ALA A 145 LEU A 150 1 O PHE A 149 N VAL A 38 SHEET 5 AA1 6 VAL A 174 ILE A 178 1 O ILE A 175 N ILE A 146 SHEET 6 AA1 6 PHE A 232 ALA A 233 1 O PHE A 232 N ILE A 178 SHEET 1 AA2 3 GLU A 240 ILE A 243 0 SHEET 2 AA2 3 GLU A 246 LYS A 252 -1 O PHE A 248 N ILE A 241 SHEET 3 AA2 3 ALA A 257 ASN A 259 -1 O ILE A 258 N ARG A 251 SHEET 1 AA3 6 LYS B 183 GLU B 193 0 SHEET 2 AA3 6 VAL B 196 GLU B 206 -1 O ASP B 204 N LYS B 185 SHEET 3 AA3 6 SER B 119 VAL B 125 1 N CYS B 124 O ILE B 203 SHEET 4 AA3 6 ALA B 252 ILE B 257 1 O LEU B 254 N LEU B 123 SHEET 5 AA3 6 LEU B 281 ILE B 285 1 O VAL B 284 N ILE B 257 SHEET 6 AA3 6 TYR B 340 ALA B 341 1 O TYR B 340 N ILE B 285 SHEET 1 AA4 3 ILE B 348 GLU B 350 0 SHEET 2 AA4 3 GLN B 356 TYR B 362 -1 O VAL B 357 N VAL B 349 SHEET 3 AA4 3 GLY B 365 GLU B 368 -1 O GLY B 365 N TYR B 362 LINK OG1 THR B 133 MG MG B 502 1555 1555 2.17 LINK O1G GTP B 501 MG MG B 502 1555 1555 1.71 LINK O2B GTP B 501 MG MG B 502 1555 1555 2.26 LINK MG MG B 502 O HOH B 608 1555 1555 2.04 LINK MG MG B 502 O HOH B 615 1555 1555 2.16 LINK MG MG B 502 O HOH B 633 1555 1555 2.06 CISPEP 1 TYR A 208 PRO A 209 0 1.10 CISPEP 2 ILE A 230 PRO A 231 0 5.96 CISPEP 3 LEU B 338 PRO B 339 0 -7.21 CRYST1 83.547 83.547 220.262 90.00 90.00 90.00 P 43 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011969 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011969 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004540 0.00000