HEADER TRANSFERASE 28-JAN-23 8FZB TITLE CRYSTAL STRUCTURE OF HUMAN FAM86A COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN-LYSINE N-METHYLTRANSFERASE EEF2KMT; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: EEF2-LYSINE METHYLTRANSFERASE,EEF2-KMT; COMPND 5 EC: 2.1.1.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EEF2KMT, FAM86A, SB153; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS PROTEIN LYSINE METHYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Z.SHAO,J.LU,J.SONG REVDAT 2 28-JUN-23 8FZB 1 JRNL REVDAT 1 21-JUN-23 8FZB 0 JRNL AUTH J.W.FRANCIS,Z.SHAO,P.NARKHEDE,A.T.TRINH,J.LU,J.SONG,O.GOZANI JRNL TITL THE FAM86 DOMAIN OF FAM86A CONFERS SUBSTRATE SPECIFICITY TO JRNL TITL 2 PROMOTE EEF2-LYS525 METHYLATION. JRNL REF J.BIOL.CHEM. V. 299 04842 2023 JRNL REFN ESSN 1083-351X JRNL PMID 37209825 JRNL DOI 10.1016/J.JBC.2023.104842 REMARK 2 REMARK 2 RESOLUTION. 3.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1-4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.82 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 33574 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.232 REMARK 3 R VALUE (WORKING SET) : 0.231 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.960 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.8200 - 8.0200 0.96 2366 149 0.1761 0.1785 REMARK 3 2 8.0200 - 6.3700 0.98 2298 146 0.2219 0.2365 REMARK 3 3 6.3700 - 5.5700 1.00 2310 146 0.2246 0.2426 REMARK 3 4 5.5700 - 5.0600 1.00 2279 145 0.2284 0.2453 REMARK 3 5 5.0600 - 4.7000 1.00 2285 145 0.2277 0.2479 REMARK 3 6 4.7000 - 4.4200 0.99 2262 144 0.2337 0.3016 REMARK 3 7 4.4200 - 4.2000 1.00 2260 142 0.2603 0.2862 REMARK 3 8 4.2000 - 4.0200 1.00 2240 143 0.2558 0.3202 REMARK 3 9 4.0200 - 3.8600 1.00 2260 143 0.2540 0.2800 REMARK 3 10 3.8600 - 3.7300 0.99 2225 141 0.2728 0.2871 REMARK 3 11 3.7300 - 3.6100 0.98 2230 141 0.3086 0.3840 REMARK 3 12 3.6100 - 3.5100 0.98 2195 139 0.3279 0.3880 REMARK 3 13 3.5100 - 3.4200 0.98 2217 140 0.3500 0.3663 REMARK 3 14 3.4200 - 3.3500 0.96 2147 136 0.3543 0.3915 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.550 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.170 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 7540 REMARK 3 ANGLE : 0.650 10274 REMARK 3 CHIRALITY : 0.041 1201 REMARK 3 PLANARITY : 0.005 1300 REMARK 3 DIHEDRAL : 5.106 1066 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8FZB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JAN-23. REMARK 100 THE DEPOSITION ID IS D_1000271888. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-APR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64154 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.350 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 20.70 REMARK 200 R MERGE (I) : 0.99800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.47 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 17.70 REMARK 200 R MERGE FOR SHELL (I) : 1.61800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.20.1-4487 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 75.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M AMMONIUM CITRATE TRIBASIC (PH REMARK 280 7.0), 10% W/V POLYETHYLENE GLYCOL 3,350 AND 5 MM TCEP, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 285K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 80.35050 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 80.35050 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 175.89500 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 80.35050 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 80.35050 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 175.89500 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 80.35050 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 80.35050 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 175.89500 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 80.35050 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 80.35050 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 175.89500 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 80.35050 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 80.35050 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 175.89500 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 80.35050 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 80.35050 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 175.89500 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 80.35050 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 80.35050 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 175.89500 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 80.35050 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 80.35050 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 175.89500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 PRO A 3 REMARK 465 GLU A 4 REMARK 465 GLU A 5 REMARK 465 ALA A 127 REMARK 465 ILE A 128 REMARK 465 ILE A 129 REMARK 465 SER A 130 REMARK 465 TYR A 131 REMARK 465 GLY A 132 REMARK 465 THR A 133 REMARK 465 GLY B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 PRO B 3 REMARK 465 GLU B 4 REMARK 465 GLU B 5 REMARK 465 ALA B 127 REMARK 465 ILE B 128 REMARK 465 ILE B 129 REMARK 465 SER B 130 REMARK 465 TYR B 131 REMARK 465 GLY B 132 REMARK 465 THR B 133 REMARK 465 ASP B 211 REMARK 465 ILE B 212 REMARK 465 THR B 213 REMARK 465 ALA B 214 REMARK 465 LYS B 215 REMARK 465 LEU B 216 REMARK 465 ASP B 217 REMARK 465 GLY C 0 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 PRO C 3 REMARK 465 GLU C 4 REMARK 465 GLU C 5 REMARK 465 THR C 126 REMARK 465 ALA C 127 REMARK 465 ILE C 128 REMARK 465 ILE C 129 REMARK 465 SER C 130 REMARK 465 TYR C 131 REMARK 465 GLY C 132 REMARK 465 THR C 213 REMARK 465 ALA C 214 REMARK 465 LYS C 215 REMARK 465 LEU C 216 REMARK 465 ARG C 270 REMARK 465 GLU C 271 REMARK 465 HIS C 272 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 6 CG OD1 ND2 REMARK 470 ARG A 24 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 85 CG ND1 CD2 CE1 NE2 REMARK 470 THR A 86 OG1 CG2 REMARK 470 GLU A 87 CG CD OE1 OE2 REMARK 470 MET A 101 CG SD CE REMARK 470 LYS A 103 CG CD CE NZ REMARK 470 GLU A 104 CG CD OE1 OE2 REMARK 470 THR A 213 OG1 CG2 REMARK 470 GLU A 254 CG CD OE1 OE2 REMARK 470 ARG A 270 CD NE CZ NH1 NH2 REMARK 470 GLU A 271 CG CD OE1 OE2 REMARK 470 HIS A 272 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 313 CD CE NZ REMARK 470 ARG B 48 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 90 CG OD1 OD2 REMARK 470 GLU B 104 CG CD OE1 OE2 REMARK 470 ARG B 180 CG CD NE CZ NH1 NH2 REMARK 470 HIS B 272 CG ND1 CD2 CE1 NE2 REMARK 470 ARG B 274 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 312 CG CD OE1 NE2 REMARK 470 LYS B 313 CG CD CE NZ REMARK 470 VAL C 84 CG1 CG2 REMARK 470 HIS C 85 CG ND1 CD2 CE1 NE2 REMARK 470 THR C 86 OG1 CG2 REMARK 470 GLU C 87 CG CD OE1 OE2 REMARK 470 TYR C 93 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS C 103 CG CD CE NZ REMARK 470 GLU C 104 CG CD OE1 OE2 REMARK 470 GLN C 107 CG CD OE1 NE2 REMARK 470 ASP C 211 CG OD1 OD2 REMARK 470 CYS C 269 SG REMARK 470 GLN C 273 CG CD OE1 NE2 REMARK 470 ARG C 274 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 285 NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 54 -95.47 -118.91 REMARK 500 LYS A 103 -178.44 76.88 REMARK 500 THR A 106 -129.84 55.42 REMARK 500 SER A 123 51.12 -107.44 REMARK 500 ARG A 220 96.21 -68.72 REMARK 500 LEU A 250 63.15 -100.59 REMARK 500 GLN A 273 171.47 64.81 REMARK 500 LYS A 313 -71.30 -111.49 REMARK 500 THR B 54 -89.36 -118.14 REMARK 500 LYS B 313 -68.37 -128.86 REMARK 500 GLU B 319 -5.09 68.66 REMARK 500 THR C 54 -86.46 -120.22 REMARK 500 PRO C 65 -169.02 -79.88 REMARK 500 ARG C 220 89.40 -67.53 REMARK 500 LEU C 314 -51.57 -122.14 REMARK 500 REMARK 500 REMARK: NULL DBREF 8FZB A 1 330 UNP Q96G04 EF2KT_HUMAN 1 330 DBREF 8FZB B 1 330 UNP Q96G04 EF2KT_HUMAN 1 330 DBREF 8FZB C 1 330 UNP Q96G04 EF2KT_HUMAN 1 330 SEQADV 8FZB GLY A 0 UNP Q96G04 EXPRESSION TAG SEQADV 8FZB TYR A 256 UNP Q96G04 ILE 256 CONFLICT SEQADV 8FZB TYR A 257 UNP Q96G04 MET 257 CONFLICT SEQADV 8FZB TYR A 296 UNP Q96G04 GLU 296 CONFLICT SEQADV 8FZB GLY B 0 UNP Q96G04 EXPRESSION TAG SEQADV 8FZB TYR B 256 UNP Q96G04 ILE 256 CONFLICT SEQADV 8FZB TYR B 257 UNP Q96G04 MET 257 CONFLICT SEQADV 8FZB TYR B 296 UNP Q96G04 GLU 296 CONFLICT SEQADV 8FZB GLY C 0 UNP Q96G04 EXPRESSION TAG SEQADV 8FZB TYR C 256 UNP Q96G04 ILE 256 CONFLICT SEQADV 8FZB TYR C 257 UNP Q96G04 MET 257 CONFLICT SEQADV 8FZB TYR C 296 UNP Q96G04 GLU 296 CONFLICT SEQRES 1 A 331 GLY MET ALA PRO GLU GLU ASN ALA GLY THR GLU LEU LEU SEQRES 2 A 331 LEU GLN SER PHE GLU ARG ARG PHE LEU ALA ALA ARG THR SEQRES 3 A 331 LEU ARG SER PHE PRO TRP GLN SER LEU GLU ALA LYS LEU SEQRES 4 A 331 ARG ASP SER SER ASP SER GLU LEU LEU ARG ASP ILE LEU SEQRES 5 A 331 HIS LYS THR VAL LYS HIS PRO VAL CYS VAL LYS HIS PRO SEQRES 6 A 331 PRO SER VAL LYS TYR ALA ARG CYS PHE LEU SER GLU LEU SEQRES 7 A 331 ILE LYS LYS HIS GLU ALA VAL HIS THR GLU PRO LEU ASP SEQRES 8 A 331 GLU LEU TYR GLU ALA LEU ALA GLU THR LEU MET ALA LYS SEQRES 9 A 331 GLU SER THR GLN GLY HIS ARG SER TYR LEU LEU PRO SER SEQRES 10 A 331 GLY GLY SER VAL THR LEU SER GLU SER THR ALA ILE ILE SEQRES 11 A 331 SER TYR GLY THR THR GLY LEU VAL THR TRP ASP ALA ALA SEQRES 12 A 331 LEU TYR LEU ALA GLU TRP ALA ILE GLU ASN PRO ALA VAL SEQRES 13 A 331 PHE THR ASN ARG THR VAL LEU GLU LEU GLY SER GLY ALA SEQRES 14 A 331 GLY LEU THR GLY LEU ALA ILE CYS LYS MET CYS ARG PRO SEQRES 15 A 331 ARG ALA TYR ILE PHE SER ASP CYS HIS SER ARG VAL LEU SEQRES 16 A 331 GLU GLN LEU ARG GLY ASN VAL LEU LEU ASN GLY LEU SER SEQRES 17 A 331 LEU GLU ALA ASP ILE THR ALA LYS LEU ASP SER PRO ARG SEQRES 18 A 331 VAL THR VAL ALA GLN LEU ASP TRP ASP VAL ALA THR VAL SEQRES 19 A 331 HIS GLN LEU SER ALA PHE GLN PRO ASP VAL VAL ILE ALA SEQRES 20 A 331 ALA ASP VAL LEU TYR CYS PRO GLU ALA TYR TYR SER LEU SEQRES 21 A 331 VAL GLY VAL LEU ARG ARG LEU ALA ALA CYS ARG GLU HIS SEQRES 22 A 331 GLN ARG ALA PRO GLU VAL TYR VAL ALA PHE THR VAL ARG SEQRES 23 A 331 ASN PRO GLU THR CYS GLN LEU PHE THR THR TYR LEU GLY SEQRES 24 A 331 ARG ALA GLY ILE ARG TRP GLU VAL GLU PRO ARG HIS GLU SEQRES 25 A 331 GLN LYS LEU PHE PRO TYR GLU GLU HIS LEU GLU MET ALA SEQRES 26 A 331 MET LEU ASN LEU THR LEU SEQRES 1 B 331 GLY MET ALA PRO GLU GLU ASN ALA GLY THR GLU LEU LEU SEQRES 2 B 331 LEU GLN SER PHE GLU ARG ARG PHE LEU ALA ALA ARG THR SEQRES 3 B 331 LEU ARG SER PHE PRO TRP GLN SER LEU GLU ALA LYS LEU SEQRES 4 B 331 ARG ASP SER SER ASP SER GLU LEU LEU ARG ASP ILE LEU SEQRES 5 B 331 HIS LYS THR VAL LYS HIS PRO VAL CYS VAL LYS HIS PRO SEQRES 6 B 331 PRO SER VAL LYS TYR ALA ARG CYS PHE LEU SER GLU LEU SEQRES 7 B 331 ILE LYS LYS HIS GLU ALA VAL HIS THR GLU PRO LEU ASP SEQRES 8 B 331 GLU LEU TYR GLU ALA LEU ALA GLU THR LEU MET ALA LYS SEQRES 9 B 331 GLU SER THR GLN GLY HIS ARG SER TYR LEU LEU PRO SER SEQRES 10 B 331 GLY GLY SER VAL THR LEU SER GLU SER THR ALA ILE ILE SEQRES 11 B 331 SER TYR GLY THR THR GLY LEU VAL THR TRP ASP ALA ALA SEQRES 12 B 331 LEU TYR LEU ALA GLU TRP ALA ILE GLU ASN PRO ALA VAL SEQRES 13 B 331 PHE THR ASN ARG THR VAL LEU GLU LEU GLY SER GLY ALA SEQRES 14 B 331 GLY LEU THR GLY LEU ALA ILE CYS LYS MET CYS ARG PRO SEQRES 15 B 331 ARG ALA TYR ILE PHE SER ASP CYS HIS SER ARG VAL LEU SEQRES 16 B 331 GLU GLN LEU ARG GLY ASN VAL LEU LEU ASN GLY LEU SER SEQRES 17 B 331 LEU GLU ALA ASP ILE THR ALA LYS LEU ASP SER PRO ARG SEQRES 18 B 331 VAL THR VAL ALA GLN LEU ASP TRP ASP VAL ALA THR VAL SEQRES 19 B 331 HIS GLN LEU SER ALA PHE GLN PRO ASP VAL VAL ILE ALA SEQRES 20 B 331 ALA ASP VAL LEU TYR CYS PRO GLU ALA TYR TYR SER LEU SEQRES 21 B 331 VAL GLY VAL LEU ARG ARG LEU ALA ALA CYS ARG GLU HIS SEQRES 22 B 331 GLN ARG ALA PRO GLU VAL TYR VAL ALA PHE THR VAL ARG SEQRES 23 B 331 ASN PRO GLU THR CYS GLN LEU PHE THR THR TYR LEU GLY SEQRES 24 B 331 ARG ALA GLY ILE ARG TRP GLU VAL GLU PRO ARG HIS GLU SEQRES 25 B 331 GLN LYS LEU PHE PRO TYR GLU GLU HIS LEU GLU MET ALA SEQRES 26 B 331 MET LEU ASN LEU THR LEU SEQRES 1 C 331 GLY MET ALA PRO GLU GLU ASN ALA GLY THR GLU LEU LEU SEQRES 2 C 331 LEU GLN SER PHE GLU ARG ARG PHE LEU ALA ALA ARG THR SEQRES 3 C 331 LEU ARG SER PHE PRO TRP GLN SER LEU GLU ALA LYS LEU SEQRES 4 C 331 ARG ASP SER SER ASP SER GLU LEU LEU ARG ASP ILE LEU SEQRES 5 C 331 HIS LYS THR VAL LYS HIS PRO VAL CYS VAL LYS HIS PRO SEQRES 6 C 331 PRO SER VAL LYS TYR ALA ARG CYS PHE LEU SER GLU LEU SEQRES 7 C 331 ILE LYS LYS HIS GLU ALA VAL HIS THR GLU PRO LEU ASP SEQRES 8 C 331 GLU LEU TYR GLU ALA LEU ALA GLU THR LEU MET ALA LYS SEQRES 9 C 331 GLU SER THR GLN GLY HIS ARG SER TYR LEU LEU PRO SER SEQRES 10 C 331 GLY GLY SER VAL THR LEU SER GLU SER THR ALA ILE ILE SEQRES 11 C 331 SER TYR GLY THR THR GLY LEU VAL THR TRP ASP ALA ALA SEQRES 12 C 331 LEU TYR LEU ALA GLU TRP ALA ILE GLU ASN PRO ALA VAL SEQRES 13 C 331 PHE THR ASN ARG THR VAL LEU GLU LEU GLY SER GLY ALA SEQRES 14 C 331 GLY LEU THR GLY LEU ALA ILE CYS LYS MET CYS ARG PRO SEQRES 15 C 331 ARG ALA TYR ILE PHE SER ASP CYS HIS SER ARG VAL LEU SEQRES 16 C 331 GLU GLN LEU ARG GLY ASN VAL LEU LEU ASN GLY LEU SER SEQRES 17 C 331 LEU GLU ALA ASP ILE THR ALA LYS LEU ASP SER PRO ARG SEQRES 18 C 331 VAL THR VAL ALA GLN LEU ASP TRP ASP VAL ALA THR VAL SEQRES 19 C 331 HIS GLN LEU SER ALA PHE GLN PRO ASP VAL VAL ILE ALA SEQRES 20 C 331 ALA ASP VAL LEU TYR CYS PRO GLU ALA TYR TYR SER LEU SEQRES 21 C 331 VAL GLY VAL LEU ARG ARG LEU ALA ALA CYS ARG GLU HIS SEQRES 22 C 331 GLN ARG ALA PRO GLU VAL TYR VAL ALA PHE THR VAL ARG SEQRES 23 C 331 ASN PRO GLU THR CYS GLN LEU PHE THR THR TYR LEU GLY SEQRES 24 C 331 ARG ALA GLY ILE ARG TRP GLU VAL GLU PRO ARG HIS GLU SEQRES 25 C 331 GLN LYS LEU PHE PRO TYR GLU GLU HIS LEU GLU MET ALA SEQRES 26 C 331 MET LEU ASN LEU THR LEU HET SAH A 401 26 HET SAH B 401 26 HET SAH C 401 26 HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE FORMUL 4 SAH 3(C14 H20 N6 O5 S) HELIX 1 AA1 ASN A 6 ALA A 22 1 17 HELIX 2 AA2 THR A 25 PHE A 29 5 5 HELIX 3 AA3 PRO A 30 SER A 41 1 12 HELIX 4 AA4 SER A 44 THR A 54 1 11 HELIX 5 AA5 HIS A 57 HIS A 63 1 7 HELIX 6 AA6 SER A 66 VAL A 84 1 19 HELIX 7 AA7 LEU A 89 ALA A 102 1 14 HELIX 8 AA8 TRP A 139 ASN A 152 1 14 HELIX 9 AA9 PRO A 153 PHE A 156 5 4 HELIX 10 AB1 GLY A 169 CYS A 179 1 11 HELIX 11 AB2 HIS A 190 ASN A 204 1 15 HELIX 12 AB3 THR A 232 ALA A 238 1 7 HELIX 13 AB4 CYS A 252 ARG A 270 1 19 HELIX 14 AB5 ASN A 286 GLY A 301 1 16 HELIX 15 AB6 ALA B 7 ALA B 22 1 16 HELIX 16 AB7 THR B 25 PHE B 29 5 5 HELIX 17 AB8 PRO B 30 SER B 41 1 12 HELIX 18 AB9 SER B 44 THR B 54 1 11 HELIX 19 AC1 HIS B 57 HIS B 63 1 7 HELIX 20 AC2 SER B 66 ALA B 83 1 18 HELIX 21 AC3 LEU B 89 MET B 101 1 13 HELIX 22 AC4 TRP B 139 ASN B 152 1 14 HELIX 23 AC5 PRO B 153 PHE B 156 5 4 HELIX 24 AC6 GLY B 169 CYS B 179 1 11 HELIX 25 AC7 HIS B 190 ASN B 204 1 15 HELIX 26 AC8 THR B 232 GLN B 240 1 9 HELIX 27 AC9 CYS B 252 ARG B 270 1 19 HELIX 28 AD1 ASN B 286 ALA B 300 1 15 HELIX 29 AD2 GLY C 8 ALA C 22 1 15 HELIX 30 AD3 THR C 25 PHE C 29 5 5 HELIX 31 AD4 PRO C 30 SER C 41 1 12 HELIX 32 AD5 SER C 44 THR C 54 1 11 HELIX 33 AD6 HIS C 57 HIS C 63 1 7 HELIX 34 AD7 SER C 66 HIS C 85 1 20 HELIX 35 AD8 LEU C 89 ALA C 102 1 14 HELIX 36 AD9 TRP C 139 ASN C 152 1 14 HELIX 37 AE1 PRO C 153 PHE C 156 5 4 HELIX 38 AE2 GLY C 169 CYS C 179 1 11 HELIX 39 AE3 HIS C 190 ASN C 204 1 15 HELIX 40 AE4 THR C 232 GLN C 240 1 9 HELIX 41 AE5 CYS C 252 GLU C 254 5 3 HELIX 42 AE6 ALA C 255 ALA C 268 1 14 HELIX 43 AE7 ASN C 286 GLY C 301 1 16 SHEET 1 AA1 2 ARG A 110 LEU A 113 0 SHEET 2 AA1 2 SER A 119 LEU A 122 -1 O LEU A 122 N ARG A 110 SHEET 1 AA2 7 ARG A 220 GLN A 225 0 SHEET 2 AA2 7 ALA A 183 ASP A 188 1 N PHE A 186 O THR A 222 SHEET 3 AA2 7 THR A 160 LEU A 164 1 N VAL A 161 O ILE A 185 SHEET 4 AA2 7 VAL A 243 ALA A 247 1 O ILE A 245 N LEU A 164 SHEET 5 AA2 7 GLU A 277 THR A 283 1 O GLU A 277 N VAL A 244 SHEET 6 AA2 7 MET A 323 THR A 329 -1 O ALA A 324 N PHE A 282 SHEET 7 AA2 7 ARG A 303 VAL A 306 -1 N GLU A 305 O ASN A 327 SHEET 1 AA3 2 HIS B 109 LEU B 113 0 SHEET 2 AA3 2 SER B 119 SER B 123 -1 O LEU B 122 N ARG B 110 SHEET 1 AA4 7 ARG B 220 GLN B 225 0 SHEET 2 AA4 7 ALA B 183 ASP B 188 1 N PHE B 186 O THR B 222 SHEET 3 AA4 7 THR B 160 LEU B 164 1 N VAL B 161 O ILE B 185 SHEET 4 AA4 7 VAL B 243 ALA B 247 1 O ILE B 245 N LEU B 164 SHEET 5 AA4 7 GLU B 277 THR B 283 1 O ALA B 281 N ALA B 246 SHEET 6 AA4 7 MET B 323 THR B 329 -1 O LEU B 328 N VAL B 278 SHEET 7 AA4 7 ARG B 303 VAL B 306 -1 N GLU B 305 O ASN B 327 SHEET 1 AA5 2 HIS C 109 LEU C 113 0 SHEET 2 AA5 2 SER C 119 SER C 123 -1 O LEU C 122 N ARG C 110 SHEET 1 AA6 7 ARG C 220 GLN C 225 0 SHEET 2 AA6 7 ALA C 183 ASP C 188 1 N PHE C 186 O THR C 222 SHEET 3 AA6 7 THR C 160 LEU C 164 1 N VAL C 161 O ILE C 185 SHEET 4 AA6 7 VAL C 243 ALA C 247 1 O VAL C 243 N THR C 160 SHEET 5 AA6 7 GLU C 277 THR C 283 1 O ALA C 281 N ALA C 246 SHEET 6 AA6 7 MET C 323 THR C 329 -1 O ALA C 324 N PHE C 282 SHEET 7 AA6 7 ARG C 303 VAL C 306 -1 N ARG C 303 O THR C 329 CRYST1 160.701 160.701 351.790 90.00 90.00 90.00 I 4 2 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006223 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006223 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002843 0.00000