HEADER VIRAL PROTEIN 05-FEB-23 8G2K TITLE STRUCTURE OF THE H3 HEMAGGLUTININ OF A/CALIFORNIA/7/2004 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMAGGLUTININ; COMPND 3 CHAIN: A; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: HEMAGGLUTININ; COMPND 6 CHAIN: B SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ALPHAINFLUENZAVIRUS INFLUENZAE; SOURCE 3 ORGANISM_TAXID: 2955291; SOURCE 4 STRAIN: A/CALIFORNIA/7/2004; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: ALPHAINFLUENZAVIRUS INFLUENZAE; SOURCE 7 ORGANISM_TAXID: 2955291; SOURCE 8 STRAIN: A/CALIFORNIA/7/2004 KEYWDS HEMAGGLUTININ, ANTIGEN, HOMOTRIMER, NATIVE, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR L.VENKATRAMANI,B.H.M.MOOERS,G.M.AIR REVDAT 3 16-OCT-24 8G2K 1 REMARK REVDAT 2 02-OCT-24 8G2K 1 COMPND REMARK HET HETNAM REVDAT 2 2 1 HETSYN FORMUL SHEET SSBOND REVDAT 2 3 1 LINK ATOM REVDAT 1 15-MAY-24 8G2K 0 JRNL AUTH L.VENKATRAMANI,B.H.M.MOOERS,G.M.AIR JRNL TITL STRUCTURE OF THE H3 HEMAGGLUTININ OF A/CALIFORNIA/7/2004 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_3973: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.25 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.110 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 31992 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.120 REMARK 3 FREE R VALUE TEST SET COUNT : 1638 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.2500 - 5.3800 1.00 2724 128 0.2015 0.2282 REMARK 3 2 5.3700 - 4.2700 1.00 2582 139 0.1591 0.1718 REMARK 3 3 4.2700 - 3.7300 1.00 2547 152 0.1761 0.2059 REMARK 3 4 3.7300 - 3.3900 1.00 2529 156 0.2107 0.2579 REMARK 3 5 3.3900 - 3.1500 1.00 2520 141 0.2304 0.2543 REMARK 3 6 3.1500 - 2.9600 1.00 2532 130 0.2348 0.2726 REMARK 3 7 2.9600 - 2.8100 1.00 2520 139 0.2570 0.2778 REMARK 3 8 2.8100 - 2.6900 1.00 2534 125 0.2749 0.2577 REMARK 3 9 2.6900 - 2.5900 1.00 2488 138 0.2514 0.2828 REMARK 3 10 2.5900 - 2.5000 1.00 2519 129 0.2544 0.2832 REMARK 3 11 2.5000 - 2.4200 1.00 2498 128 0.2714 0.2854 REMARK 3 12 2.4200 - 2.3500 0.95 2361 133 0.2802 0.3223 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.320 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 48.26 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 4137 REMARK 3 ANGLE : 0.608 5602 REMARK 3 CHIRALITY : 0.047 647 REMARK 3 PLANARITY : 0.003 718 REMARK 3 DIHEDRAL : 12.126 1551 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 8:41 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.183 17.380 106.420 REMARK 3 T TENSOR REMARK 3 T11: 0.4011 T22: 0.2772 REMARK 3 T33: 0.5529 T12: 0.0576 REMARK 3 T13: 0.0786 T23: 0.0268 REMARK 3 L TENSOR REMARK 3 L11: 1.3904 L22: 1.7283 REMARK 3 L33: 4.1667 L12: 0.2554 REMARK 3 L13: 1.5473 L23: 2.5361 REMARK 3 S TENSOR REMARK 3 S11: -0.0245 S12: 0.0256 S13: 0.2033 REMARK 3 S21: -0.2022 S22: 0.0383 S23: 0.0726 REMARK 3 S31: -0.5209 S32: -0.5629 S33: 0.0661 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND ( RESID 42:104 OR RESID 401:401 ) ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.145 25.099 56.758 REMARK 3 T TENSOR REMARK 3 T11: 0.7506 T22: 0.6723 REMARK 3 T33: 0.6055 T12: -0.0128 REMARK 3 T13: 0.1462 T23: 0.1680 REMARK 3 L TENSOR REMARK 3 L11: 2.0818 L22: 1.5427 REMARK 3 L33: 3.9037 L12: -0.6508 REMARK 3 L13: -0.1275 L23: -0.2173 REMARK 3 S TENSOR REMARK 3 S11: 0.3035 S12: 0.7261 S13: 0.5000 REMARK 3 S21: -0.5789 S22: -0.0402 S23: -0.0912 REMARK 3 S31: -0.5182 S32: 0.0075 S33: -0.2373 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND ( RESID 105:135 OR RESID 402:402 OR REMARK 3 RESID 403:403 ) ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.329 17.776 41.767 REMARK 3 T TENSOR REMARK 3 T11: 0.8260 T22: 1.1133 REMARK 3 T33: 0.5891 T12: 0.0713 REMARK 3 T13: 0.2633 T23: 0.1006 REMARK 3 L TENSOR REMARK 3 L11: 1.3529 L22: 1.9877 REMARK 3 L33: 4.2482 L12: 1.7019 REMARK 3 L13: -0.7427 L23: -0.7280 REMARK 3 S TENSOR REMARK 3 S11: 0.1984 S12: 0.7527 S13: 0.3140 REMARK 3 S21: -0.5018 S22: 0.1113 S23: -0.2269 REMARK 3 S31: 0.2093 S32: 0.9341 S33: -0.2351 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 136:246 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.020 13.604 34.400 REMARK 3 T TENSOR REMARK 3 T11: 1.0088 T22: 1.1212 REMARK 3 T33: 0.5031 T12: 0.0091 REMARK 3 T13: 0.1931 T23: 0.0299 REMARK 3 L TENSOR REMARK 3 L11: 2.2383 L22: 2.4219 REMARK 3 L33: 3.1361 L12: -0.5482 REMARK 3 L13: 0.1122 L23: -0.9757 REMARK 3 S TENSOR REMARK 3 S11: -0.0158 S12: 0.8266 S13: 0.1582 REMARK 3 S21: -0.6778 S22: 0.1577 S23: -0.0773 REMARK 3 S31: -0.3476 S32: -0.1727 S33: -0.1891 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 247:274 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.633 17.858 51.074 REMARK 3 T TENSOR REMARK 3 T11: 0.7205 T22: 0.6766 REMARK 3 T33: 0.5609 T12: -0.0349 REMARK 3 T13: 0.1675 T23: 0.0997 REMARK 3 L TENSOR REMARK 3 L11: 1.8265 L22: 1.7349 REMARK 3 L33: 5.2436 L12: 0.5258 REMARK 3 L13: -0.2230 L23: 0.1498 REMARK 3 S TENSOR REMARK 3 S11: 0.0021 S12: 0.5439 S13: 0.0332 REMARK 3 S21: -0.5293 S22: 0.2014 S23: -0.1633 REMARK 3 S31: -0.0492 S32: 0.5365 S33: -0.2175 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN A AND RESID 275:304 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.367 21.331 74.999 REMARK 3 T TENSOR REMARK 3 T11: 0.4832 T22: 0.3446 REMARK 3 T33: 0.4702 T12: -0.0423 REMARK 3 T13: 0.1502 T23: 0.0373 REMARK 3 L TENSOR REMARK 3 L11: 1.6653 L22: 7.6080 REMARK 3 L33: 7.3264 L12: 0.0667 REMARK 3 L13: -2.3914 L23: -4.5924 REMARK 3 S TENSOR REMARK 3 S11: 0.3596 S12: 0.1790 S13: 0.2164 REMARK 3 S21: 0.1325 S22: 0.1417 S23: 0.0554 REMARK 3 S31: -0.8434 S32: 0.1374 S33: -0.3792 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN A AND RESID 305:325 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.703 15.700 92.562 REMARK 3 T TENSOR REMARK 3 T11: 0.3505 T22: 0.3075 REMARK 3 T33: 0.5033 T12: 0.0754 REMARK 3 T13: 0.0436 T23: 0.0335 REMARK 3 L TENSOR REMARK 3 L11: 1.4022 L22: 1.2269 REMARK 3 L33: 2.4183 L12: -0.1570 REMARK 3 L13: -0.6314 L23: -0.2650 REMARK 3 S TENSOR REMARK 3 S11: -0.0368 S12: 0.2002 S13: 0.2729 REMARK 3 S21: -0.0046 S22: 0.0562 S23: -0.0120 REMARK 3 S31: -0.4074 S32: -0.8256 S33: -0.1275 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: ( CHAIN B AND RESID 1:10 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.061 7.921 113.743 REMARK 3 T TENSOR REMARK 3 T11: 0.3845 T22: 0.4187 REMARK 3 T33: 0.6430 T12: 0.0024 REMARK 3 T13: 0.0094 T23: -0.0329 REMARK 3 L TENSOR REMARK 3 L11: 4.8882 L22: 4.4944 REMARK 3 L33: 7.5710 L12: -4.3614 REMARK 3 L13: -3.2092 L23: 1.1284 REMARK 3 S TENSOR REMARK 3 S11: 0.8001 S12: 0.6382 S13: -1.5129 REMARK 3 S21: 0.1902 S22: -0.7004 S23: -0.2410 REMARK 3 S31: -0.1096 S32: -0.3867 S33: -0.0980 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: ( CHAIN B AND RESID 11:22 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.360 21.274 113.942 REMARK 3 T TENSOR REMARK 3 T11: 0.4465 T22: 0.3510 REMARK 3 T33: 0.4868 T12: 0.0247 REMARK 3 T13: 0.0315 T23: -0.0724 REMARK 3 L TENSOR REMARK 3 L11: 7.3930 L22: 4.6542 REMARK 3 L33: 3.1065 L12: -2.2217 REMARK 3 L13: -3.6739 L23: 0.3404 REMARK 3 S TENSOR REMARK 3 S11: -0.0619 S12: -0.2439 S13: -0.4960 REMARK 3 S21: 0.4149 S22: -0.0757 S23: 0.0781 REMARK 3 S31: -0.7657 S32: -0.3042 S33: -0.0039 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: ( CHAIN B AND RESID 23:30 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.344 23.000 128.405 REMARK 3 T TENSOR REMARK 3 T11: 0.5516 T22: 0.2807 REMARK 3 T33: 0.4583 T12: 0.0308 REMARK 3 T13: -0.0011 T23: -0.0888 REMARK 3 L TENSOR REMARK 3 L11: 5.9706 L22: 5.2318 REMARK 3 L33: 9.2630 L12: -0.0141 REMARK 3 L13: -1.1669 L23: 3.6872 REMARK 3 S TENSOR REMARK 3 S11: -0.6108 S12: -1.0361 S13: 0.1874 REMARK 3 S21: 0.5045 S22: -0.3214 S23: 0.5051 REMARK 3 S31: -0.5546 S32: 0.0897 S33: 0.9252 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: ( CHAIN B AND RESID 31:55 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.018 16.574 107.403 REMARK 3 T TENSOR REMARK 3 T11: 0.3733 T22: 0.2122 REMARK 3 T33: 0.5706 T12: -0.0895 REMARK 3 T13: 0.0600 T23: -0.0712 REMARK 3 L TENSOR REMARK 3 L11: 1.9859 L22: 1.5689 REMARK 3 L33: 4.8187 L12: -1.0823 REMARK 3 L13: -2.1401 L23: 2.4100 REMARK 3 S TENSOR REMARK 3 S11: 0.0060 S12: 0.0033 S13: 0.2059 REMARK 3 S21: 0.1610 S22: 0.0020 S23: 0.1737 REMARK 3 S31: -0.2689 S32: 1.3468 S33: 0.0009 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: ( CHAIN B AND RESID 56:65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.645 13.303 75.592 REMARK 3 T TENSOR REMARK 3 T11: 0.7152 T22: 0.5322 REMARK 3 T33: 0.6821 T12: -0.2328 REMARK 3 T13: 0.1269 T23: 0.0222 REMARK 3 L TENSOR REMARK 3 L11: 2.8451 L22: 2.7834 REMARK 3 L33: 0.3591 L12: -1.9559 REMARK 3 L13: -0.9894 L23: 0.6833 REMARK 3 S TENSOR REMARK 3 S11: 0.1726 S12: -0.0772 S13: 0.1669 REMARK 3 S21: 0.0530 S22: -0.4931 S23: 0.1542 REMARK 3 S31: 0.8716 S32: 0.5755 S33: 0.1455 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: ( CHAIN B AND RESID 66:126 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.732 7.330 88.276 REMARK 3 T TENSOR REMARK 3 T11: 0.3340 T22: 0.2822 REMARK 3 T33: 0.4744 T12: -0.0033 REMARK 3 T13: 0.0358 T23: 0.0323 REMARK 3 L TENSOR REMARK 3 L11: 0.8487 L22: 0.8069 REMARK 3 L33: 7.3189 L12: 0.1144 REMARK 3 L13: 1.1904 L23: 1.2034 REMARK 3 S TENSOR REMARK 3 S11: -0.0011 S12: 0.1784 S13: 0.1363 REMARK 3 S21: -0.1093 S22: 0.0414 S23: 0.0259 REMARK 3 S31: -0.3858 S32: 0.1319 S33: -0.0087 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: ( CHAIN B AND ( RESID 127:173 OR RESID 201:201 ) ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.215 12.567 134.330 REMARK 3 T TENSOR REMARK 3 T11: 0.4175 T22: 0.3529 REMARK 3 T33: 0.4684 T12: -0.0258 REMARK 3 T13: -0.0028 T23: -0.1151 REMARK 3 L TENSOR REMARK 3 L11: 2.8482 L22: 5.2182 REMARK 3 L33: 5.9772 L12: 0.1412 REMARK 3 L13: 1.3097 L23: -0.7981 REMARK 3 S TENSOR REMARK 3 S11: 0.1626 S12: -0.2673 S13: 0.1672 REMARK 3 S21: 0.3150 S22: -0.1423 S23: -0.1934 REMARK 3 S31: 0.0220 S32: 0.0433 S33: -0.0554 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8G2K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-FEB-23. REMARK 100 THE DEPOSITION ID IS D_1000271420. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-NOV-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH3R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM 1.0.7 REMARK 200 DATA SCALING SOFTWARE : SCALA 2.10 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31998 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 34.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 9.800 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : 0.06600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.9400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 8.70 REMARK 200 R MERGE FOR SHELL (I) : 0.71200 REMARK 200 R SYM FOR SHELL (I) : 0.83000 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.1 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PENTAERYTHRITOL PROPOXYLATE (5/4 REMARK 280 PO/OH), 200 MM KCL AND 50 MM HEPES (PH 7.5 ADJUSTED WITH KOH)., REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 310.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 50.59950 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 29.21363 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 128.15400 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 50.59950 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 29.21363 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 128.15400 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 50.59950 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 29.21363 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 128.15400 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 50.59950 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 29.21363 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 128.15400 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 50.59950 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 29.21363 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 128.15400 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 50.59950 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 29.21363 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 128.15400 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 58.42727 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 256.30800 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 58.42727 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 256.30800 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 58.42727 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 256.30800 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 58.42727 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 256.30800 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 58.42727 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 256.30800 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 58.42727 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 256.30800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 43110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 60340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 367 O HOH B 370 2.03 REMARK 500 OG1 THR B 156 O HOH B 301 2.14 REMARK 500 O HOH B 354 O HOH B 357 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 62 -120.02 56.65 REMARK 500 TRP A 84 147.49 -172.83 REMARK 500 CYS A 97 -151.91 -151.13 REMARK 500 TRP A 127 76.50 -100.05 REMARK 500 SER A 143 -5.54 81.32 REMARK 500 SER A 146 -158.08 -149.53 REMARK 500 LEU A 157 -74.96 -107.72 REMARK 500 LYS A 158 58.44 -104.28 REMARK 500 THR A 196 14.51 56.69 REMARK 500 SER A 266 -166.89 -164.75 REMARK 500 PHE B 63 -94.15 -118.73 REMARK 500 GLN B 65 -146.74 -130.62 REMARK 500 ARG B 127 -117.78 50.50 REMARK 500 TYR B 141 41.41 -93.18 REMARK 500 REMARK 500 REMARK: NULL DBREF 8G2K A 8 325 UNP A4GXY4 A4GXY4_9INFA 8 325 DBREF 8G2K B 1 173 UNP A3DRV6 A3DRV6_9INFA 346 518 SEQADV 8G2K ALA A 8 UNP A4GXY4 ASN 8 CONFLICT SEQRES 1 A 318 ALA SER THR ALA THR LEU CYS LEU GLY HIS HIS ALA VAL SEQRES 2 A 318 PRO ASN GLY THR ILE VAL LYS THR ILE THR ASN ASP GLN SEQRES 3 A 318 ILE GLU VAL THR ASN ALA THR GLU LEU VAL GLN SER SER SEQRES 4 A 318 SER THR GLY GLY ILE CYS ASP SER PRO HIS GLN ILE LEU SEQRES 5 A 318 ASP GLY GLU ASN CYS THR LEU ILE ASP ALA LEU LEU GLY SEQRES 6 A 318 ASP PRO GLN CYS ASP GLY PHE GLN ASN LYS LYS TRP ASP SEQRES 7 A 318 LEU PHE VAL GLU ARG SER LYS ALA TYR SER ASN CYS TYR SEQRES 8 A 318 PRO TYR ASP VAL PRO ASP TYR ALA SER LEU ARG SER LEU SEQRES 9 A 318 VAL ALA SER SER GLY THR LEU GLU PHE ASN ASN GLU SER SEQRES 10 A 318 PHE ASN TRP THR GLY VAL THR GLN ASN GLY THR SER SER SEQRES 11 A 318 SER CYS LYS ARG ARG SER ASN ASN SER PHE PHE SER ARG SEQRES 12 A 318 LEU ASN TRP LEU THR HIS LEU LYS PHE LYS TYR PRO ALA SEQRES 13 A 318 LEU ASN VAL THR MET PRO ASN ASN GLU LYS PHE ASP LYS SEQRES 14 A 318 LEU TYR ILE TRP GLY VAL HIS HIS PRO GLY THR ASN ASN SEQRES 15 A 318 ASP GLN ILE SER LEU TYR THR GLN ALA SER GLY ARG ILE SEQRES 16 A 318 THR VAL SER THR LYS ARG SER GLN GLN THR VAL ILE PRO SEQRES 17 A 318 ASN ILE GLY SER ARG PRO ARG VAL ARG ASP ILE PRO SER SEQRES 18 A 318 ARG ILE SER ILE TYR TRP THR ILE VAL LYS PRO GLY ASP SEQRES 19 A 318 ILE LEU LEU ILE ASN SER THR GLY ASN LEU ILE ALA PRO SEQRES 20 A 318 ARG GLY TYR PHE LYS ILE ARG SER GLY LYS SER SER ILE SEQRES 21 A 318 MET ARG SER ASP ALA PRO ILE GLY LYS CYS ASN SER GLU SEQRES 22 A 318 CYS ILE THR PRO ASN GLY SER ILE PRO ASN ASP LYS PRO SEQRES 23 A 318 PHE GLN ASN VAL ASN ARG ILE THR TYR GLY ALA CYS PRO SEQRES 24 A 318 ARG TYR VAL LYS GLN ASN THR LEU LYS LEU ALA THR GLY SEQRES 25 A 318 MET ARG ASN VAL PRO GLU SEQRES 1 B 173 GLY ILE PHE GLY ALA ILE ALA GLY PHE ILE GLU ASN GLY SEQRES 2 B 173 TRP GLU GLY MET VAL ASP GLY TRP TYR GLY PHE ARG HIS SEQRES 3 B 173 GLN ASN SER GLU GLY ILE GLY GLN ALA ALA ASP LEU LYS SEQRES 4 B 173 SER THR GLN ALA ALA ILE ASN GLN ILE ASN GLY LYS LEU SEQRES 5 B 173 ASN ARG LEU ILE GLY LYS THR ASN GLU LYS PHE HIS GLN SEQRES 6 B 173 ILE GLU LYS GLU PHE SER GLU VAL GLU GLY ARG ILE GLN SEQRES 7 B 173 ASP LEU GLU LYS TYR VAL GLU ASP THR LYS ILE ASP LEU SEQRES 8 B 173 TRP SER TYR ASN ALA GLU LEU LEU VAL ALA LEU GLU ASN SEQRES 9 B 173 GLN HIS THR ILE ASP LEU THR ASP SER GLU MET ASN LYS SEQRES 10 B 173 LEU PHE GLU ARG THR LYS LYS GLN LEU ARG GLU ASN ALA SEQRES 11 B 173 GLU ASP MET GLY ASN GLY CYS PHE LYS ILE TYR HIS LYS SEQRES 12 B 173 CYS ASP ASN ALA CYS ILE GLY SER ILE ARG ASN GLY THR SEQRES 13 B 173 TYR ASP HIS ASP VAL TYR ARG ASP GLU ALA LEU ASN ASN SEQRES 14 B 173 ARG PHE GLN ILE HET NAG C 1 26 HET NAG C 2 27 HET NAG D 1 26 HET NAG D 2 26 HET BMA D 3 21 HET NAG E 1 26 HET NAG E 2 27 HET NAG F 1 26 HET NAG F 2 27 HET NAG A 401 27 HET NAG A 402 27 HET NAG A 403 27 HET NAG B 201 27 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 3 NAG 12(C8 H15 N O6) FORMUL 4 BMA C6 H12 O6 FORMUL 11 HOH *120(H2 O) HELIX 1 AA1 THR A 65 GLY A 72 1 8 HELIX 2 AA2 ASP A 73 GLN A 80 5 8 HELIX 3 AA3 ASP A 104 GLY A 116 1 13 HELIX 4 AA4 THR A 187 THR A 196 1 10 HELIX 5 AA5 ASP B 37 ILE B 56 1 20 HELIX 6 AA6 GLY B 75 ARG B 127 1 53 HELIX 7 AA7 ASP B 145 ASN B 154 1 10 HELIX 8 AA8 ASP B 158 PHE B 171 1 14 SHEET 1 AA1 5 GLY B 31 ALA B 36 0 SHEET 2 AA1 5 TYR B 22 ASN B 28 -1 N PHE B 24 O ALA B 35 SHEET 3 AA1 5 ALA A 11 HIS A 17 -1 N CYS A 14 O ARG B 25 SHEET 4 AA1 5 CYS B 137 ILE B 140 -1 O PHE B 138 N LEU A 13 SHEET 5 AA1 5 ALA B 130 ASP B 132 -1 N GLU B 131 O LYS B 139 SHEET 1 AA2 2 THR A 24 VAL A 26 0 SHEET 2 AA2 2 ILE A 34 VAL A 36 -1 O VAL A 36 N THR A 24 SHEET 1 AA3 2 ALA A 39 GLU A 41 0 SHEET 2 AA3 2 LYS A 315 ALA A 317 -1 O LEU A 316 N THR A 40 SHEET 1 AA4 3 VAL A 43 GLN A 44 0 SHEET 2 AA4 3 PHE A 294 GLN A 295 1 O PHE A 294 N GLN A 44 SHEET 3 AA4 3 ARG A 307 TYR A 308 1 O ARG A 307 N GLN A 295 SHEET 1 AA5 2 ILE A 51 SER A 54 0 SHEET 2 AA5 2 ILE A 274 ASN A 278 1 O GLY A 275 N ILE A 51 SHEET 1 AA6 3 ILE A 58 ASP A 60 0 SHEET 2 AA6 3 LEU A 86 GLU A 89 1 O VAL A 88 N LEU A 59 SHEET 3 AA6 3 SER A 266 ARG A 269 1 O MET A 268 N PHE A 87 SHEET 1 AA7 5 TYR A 100 ASP A 101 0 SHEET 2 AA7 5 ARG A 229 VAL A 237 1 O ILE A 230 N ASP A 101 SHEET 3 AA7 5 LYS A 176 HIS A 184 -1 N HIS A 184 O ARG A 229 SHEET 4 AA7 5 GLY A 256 LYS A 259 -1 O PHE A 258 N LEU A 177 SHEET 5 AA7 5 PHE A 120 ASN A 122 -1 N ASN A 121 O TYR A 257 SHEET 1 AA8 5 TYR A 100 ASP A 101 0 SHEET 2 AA8 5 ARG A 229 VAL A 237 1 O ILE A 230 N ASP A 101 SHEET 3 AA8 5 LYS A 176 HIS A 184 -1 N HIS A 184 O ARG A 229 SHEET 4 AA8 5 LEU A 251 PRO A 254 -1 O ILE A 252 N GLY A 181 SHEET 5 AA8 5 LEU A 151 TRP A 153 -1 N ASN A 152 O ALA A 253 SHEET 1 AA9 2 SER A 136 ARG A 141 0 SHEET 2 AA9 2 ASN A 144 SER A 146 -1 O ASN A 144 N ARG A 141 SHEET 1 AB1 4 LEU A 164 PRO A 169 0 SHEET 2 AB1 4 ILE A 242 SER A 247 -1 O SER A 247 N LEU A 164 SHEET 3 AB1 4 ILE A 202 SER A 205 -1 N SER A 205 O LEU A 244 SHEET 4 AB1 4 GLN A 210 VAL A 213 -1 O VAL A 213 N ILE A 202 SHEET 1 AB2 2 CYS A 281 THR A 283 0 SHEET 2 AB2 2 GLY A 286 ILE A 288 -1 O GLY A 286 N THR A 283 SHEET 1 AB3 2 GLY A 303 CYS A 305 0 SHEET 2 AB3 2 ASN B 60 LYS B 62 -1 O LYS B 62 N GLY A 303 SSBOND 1 CYS A 14 CYS B 137 1555 1555 2.04 SSBOND 2 CYS A 52 CYS A 277 1555 1555 2.04 SSBOND 3 CYS A 64 CYS A 76 1555 1555 2.03 SSBOND 4 CYS A 97 CYS A 139 1555 1555 2.03 SSBOND 5 CYS A 281 CYS A 305 1555 1555 2.03 LINK ND2 ASN A 38 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN A 63 C1 NAG A 401 1555 1555 1.44 LINK ND2 ASN A 126 C1 NAG A 402 1555 1555 1.44 LINK ND2 ASN A 133 C1 NAG A 403 1555 1555 1.44 LINK ND2 ASN A 165 C1 NAG D 1 1555 1555 1.44 LINK ND2 ASN A 246 C1 NAG E 1 1555 1555 1.45 LINK ND2 ASN A 285 C1 NAG F 1 1555 1555 1.44 LINK ND2 ASN B 154 C1 NAG B 201 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.45 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.43 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.43 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.46 CISPEP 1 SER A 54 PRO A 55 0 -0.17 CRYST1 101.199 101.199 384.462 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009882 0.005705 0.000000 0.00000 SCALE2 0.000000 0.011410 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002601 0.00000