HEADER OXIDOREDUCTASE 06-FEB-23 8G2S TITLE HORSE LIVER ALCOHOL DEHYDROGENSE HIS-51-GLN FORM COMPLEXED WITH NAD+ TITLE 2 AND CAPRIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALCOHOL DEHYDROGENASE E CHAIN; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.1.1.1; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: EQUUS CABALLUS; SOURCE 3 ORGANISM_COMMON: HORSE; SOURCE 4 ORGANISM_TAXID: 9796; SOURCE 5 ORGAN: LIVER; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: XL1-BLUE KEYWDS ALCOHOL DEHYDROGENASE HORSE LIVER HIS-51 GLN SUBSTITUTION COMPLEX KEYWDS 2 WITH NAD+ AND CAPRIC ACID, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR B.V.PLAPP REVDAT 3 04-SEP-24 8G2S 1 JRNL REVDAT 2 22-MAY-24 8G2S 1 REMARK REVDAT 1 15-FEB-23 8G2S 0 JRNL AUTH B.V.PLAPP,E.G.KOVALEVA JRNL TITL HISTIDINE-51 FACILITATES DEPROTONATION OF THE ZINC-BOUND JRNL TITL 2 LIGAND DURING CATALYSIS BY HORSE LIVER ALCOHOL DEHYDROGENASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH B.V.PLAPP REMARK 1 TITL SOLVENT ISOTOPE AND MUTAGENESIS STUDIES ON THE PROTON RELAY REMARK 1 TITL 2 SYSTEM IN YEAST ALCOHOL DEHYDROGENASE 1. REMARK 1 REF CHEM.BIOL.INTERACT. V. 388 10853 2024 REMARK 1 REFN ISSN 0009-2797 REMARK 1 PMID 38151107 REMARK 1 DOI 10.1016/J.CBI.2023.110853 REMARK 1 REFERENCE 2 REMARK 1 AUTH B.V.PLAPP,S.RAMASWAMY REMARK 1 TITL ATOMIC-RESOLUTION STRUCTURES OF HORSE LIVER ALCOHOL REMARK 1 TITL 2 DEHYDROGENASE WITH NAD(+) AND FLUOROALCOHOLS DEFINE STRAINED REMARK 1 TITL 3 MICHAELIS COMPLEXES. REMARK 1 REF BIOCHEMISTRY V. 51 4035 2012 REMARK 1 REFN ISSN 1520-4995 REMARK 1 PMID 22531044 REMARK 1 DOI 10.1021/BI300378N REMARK 1 REFERENCE 3 REMARK 1 AUTH L.A.LEBRUN,D.H.PARK,S.RAMASWAMY,B.V.PLAPP REMARK 1 TITL PARTICIPATION OF HISTIDINE-51 IN CATALYSIS BY HORSE LIVER REMARK 1 TITL 2 ALCOHOL DEHYDROGENASE. REMARK 1 REF BIOCHEMISTRY V. 43 3014 2004 REMARK 1 REFN ISSN 0006-2960 REMARK 1 PMID 15023053 REMARK 1 DOI 10.1021/BI036103M REMARK 1 REFERENCE 4 REMARK 1 AUTH E.G.KOVALEVA REMARK 1 TITL PROTON TRANSFER IN THE MECHANISM OF HORSE LIVER ALCOHOL REMARK 1 TITL 2 DEHYDROGENASE REMARK 1 REF PH.D. THESIS V.IOWA 2004 REMARK 1 REFERENCE 5 REMARK 1 AUTH B.V.PLAPP,L.A.LEBRUN REMARK 1 TITL CONTROL OF COENZYME BINDING TO HORSE LIVER ALCOHOL REMARK 1 TITL 2 DEHYDROGENASE. REMARK 1 REF BIOCHEMISTRY V. 38 12387 1999 REMARK 1 REFN ISSN 0006-2960 REMARK 1 PMID 10493806 REMARK 1 DOI 10.1021/BI991306P REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 87.4 REMARK 3 NUMBER OF REFLECTIONS : 112223 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2272 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.49 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4516 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 47.63 REMARK 3 BIN R VALUE (WORKING SET) : 0.7110 REMARK 3 BIN FREE R VALUE SET COUNT : 92 REMARK 3 BIN FREE R VALUE : 0.9500 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5568 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 140 REMARK 3 SOLVENT ATOMS : 751 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.51000 REMARK 3 B22 (A**2) : 0.46000 REMARK 3 B33 (A**2) : -0.70000 REMARK 3 B12 (A**2) : -0.52000 REMARK 3 B13 (A**2) : 0.18000 REMARK 3 B23 (A**2) : -0.02000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.067 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.071 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.040 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.063 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6099 ; 0.013 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 6007 ; 0.001 ; 0.015 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8279 ; 1.989 ; 1.688 REMARK 3 BOND ANGLES OTHERS (DEGREES): 14013 ; 1.499 ; 1.613 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 790 ; 6.743 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 240 ;34.896 ;23.458 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1112 ;12.332 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;11.235 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 835 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6674 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1204 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3060 ; 1.190 ; 1.310 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3059 ; 1.189 ; 1.309 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3837 ; 1.686 ; 1.968 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3838 ; 1.686 ; 1.968 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3039 ; 2.040 ; 1.556 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3040 ; 2.039 ; 1.556 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4425 ; 3.018 ; 2.235 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 6792 ; 4.208 ;17.017 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 6584 ; 3.964 ;16.321 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8G2S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-FEB-23. REMARK 100 THE DEPOSITION ID IS D_1000272111. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-MAY-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : CONFOCAL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : D*TREK 9.9.9.8L REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 114498 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 19.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 87.4 REMARK 200 DATA REDUNDANCY : 3.790 REMARK 200 R MERGE (I) : 0.03300 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 23.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.50 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 3.55 REMARK 200 R MERGE FOR SHELL (I) : 0.21000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 1N8K REMARK 200 REMARK 200 REMARK: BLOCK REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10 MG/ML PROTEIN IN 50 MM AMMONIUM N REMARK 280 -[TRIS(HYDROXYMETHYL)METHYL]-2-AMINOETHANESULFATE BUFFER WITH REMARK 280 0.25 MM EDTA, 2 MM NAD+ AND 1 MM SODIUM CAPRATE, 13 % 2-METHYL-2, REMARK 280 4-PENTANEDIOL, RAISED TO 25% MPD, THEN CRYSTALS SOAKED WITH 1 MM REMARK 280 ACETALDEHYDE AT 278 K FOR 70 MIN AND THEN WITH 100 MM SODIUM REMARK 280 CAPRATE FOR 2 H BEFORE PLIUNGING INTO LIQUID N2., PH 7.0, BATCH REMARK 280 MODE REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -115.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 256 O HOH B 501 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 312 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 67 -7.56 -146.09 REMARK 500 THR A 143 -63.24 -125.28 REMARK 500 SER A 144 70.49 55.84 REMARK 500 CYS A 174 -81.29 -154.22 REMARK 500 ILE A 269 -55.16 -127.55 REMARK 500 LYS A 338 30.84 71.82 REMARK 500 ILE A 368 -86.82 -100.91 REMARK 500 HIS B 67 -6.12 -143.66 REMARK 500 THR B 143 -76.20 -124.82 REMARK 500 SER B 144 73.12 65.77 REMARK 500 CYS B 174 -75.55 -151.56 REMARK 500 ILE B 269 -57.50 -129.17 REMARK 500 ILE B 368 -89.92 -98.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 46 SG REMARK 620 2 HIS A 67 NE2 107.1 REMARK 620 3 CYS A 174 SG 122.8 114.7 REMARK 620 4 DKA A 404 O1 102.3 96.5 109.6 REMARK 620 5 DKA A 404 O2 96.3 103.7 109.1 8.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 97 SG REMARK 620 2 CYS A 100 SG 108.9 REMARK 620 3 CYS A 103 SG 115.3 105.3 REMARK 620 4 CYS A 111 SG 103.9 119.7 104.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 46 SG REMARK 620 2 HIS B 67 NE2 107.6 REMARK 620 3 CYS B 174 SG 121.7 115.1 REMARK 620 4 DKA B 404 O1 97.7 104.5 107.5 REMARK 620 5 DKA B 404 O2 104.8 103.2 102.1 7.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 97 SG REMARK 620 2 CYS B 100 SG 111.0 REMARK 620 3 CYS B 103 SG 115.4 105.2 REMARK 620 4 CYS B 111 SG 103.8 119.8 101.8 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8G2L RELATED DB: PDB REMARK 900 H51Q ADH WITH NAD+ AND 2,2,2-TRIFLUOROETHANOL REMARK 900 RELATED ID: 1QV6 RELATED DB: PDB REMARK 900 H51Q/K228R ADH COMPLEXED WITH NAD AND 2,4-DIFLUOROBENZYL ALCOHOL REMARK 900 RELATED ID: 1QV7 RELATED DB: PDB REMARK 900 H51Q/K228R ADH WITH NAD AND 2,3-DIFLUOROBENZYL ALCOHOL DBREF 8G2S A 1 374 UNP P00327 ADH1E_HORSE 2 375 DBREF 8G2S B 1 374 UNP P00327 ADH1E_HORSE 2 375 SEQADV 8G2S GLN A 51 UNP P00327 HIS 52 ENGINEERED MUTATION SEQADV 8G2S GLN B 51 UNP P00327 HIS 52 ENGINEERED MUTATION SEQRES 1 A 374 SER THR ALA GLY LYS VAL ILE LYS CYS LYS ALA ALA VAL SEQRES 2 A 374 LEU TRP GLU GLU LYS LYS PRO PHE SER ILE GLU GLU VAL SEQRES 3 A 374 GLU VAL ALA PRO PRO LYS ALA HIS GLU VAL ARG ILE LYS SEQRES 4 A 374 MET VAL ALA THR GLY ILE CYS ARG SER ASP ASP GLN VAL SEQRES 5 A 374 VAL SER GLY THR LEU VAL THR PRO LEU PRO VAL ILE ALA SEQRES 6 A 374 GLY HIS GLU ALA ALA GLY ILE VAL GLU SER ILE GLY GLU SEQRES 7 A 374 GLY VAL THR THR VAL ARG PRO GLY ASP LYS VAL ILE PRO SEQRES 8 A 374 LEU PHE THR PRO GLN CYS GLY LYS CYS ARG VAL CYS LYS SEQRES 9 A 374 HIS PRO GLU GLY ASN PHE CYS LEU LYS ASN ASP LEU SER SEQRES 10 A 374 MET PRO ARG GLY THR MET GLN ASP GLY THR SER ARG PHE SEQRES 11 A 374 THR CYS ARG GLY LYS PRO ILE HIS HIS PHE LEU GLY THR SEQRES 12 A 374 SER THR PHE SER GLN TYR THR VAL VAL ASP GLU ILE SER SEQRES 13 A 374 VAL ALA LYS ILE ASP ALA ALA SER PRO LEU GLU LYS VAL SEQRES 14 A 374 CYS LEU ILE GLY CYS GLY PHE SER THR GLY TYR GLY SER SEQRES 15 A 374 ALA VAL LYS VAL ALA LYS VAL THR GLN GLY SER THR CYS SEQRES 16 A 374 ALA VAL PHE GLY LEU GLY GLY VAL GLY LEU SER VAL ILE SEQRES 17 A 374 MET GLY CYS LYS ALA ALA GLY ALA ALA ARG ILE ILE GLY SEQRES 18 A 374 VAL ASP ILE ASN LYS ASP LYS PHE ALA LYS ALA LYS GLU SEQRES 19 A 374 VAL GLY ALA THR GLU CYS VAL ASN PRO GLN ASP TYR LYS SEQRES 20 A 374 LYS PRO ILE GLN GLU VAL LEU THR GLU MET SER ASN GLY SEQRES 21 A 374 GLY VAL ASP PHE SER PHE GLU VAL ILE GLY ARG LEU ASP SEQRES 22 A 374 THR MET VAL THR ALA LEU SER CYS CYS GLN GLU ALA TYR SEQRES 23 A 374 GLY VAL SER VAL ILE VAL GLY VAL PRO PRO ASP SER GLN SEQRES 24 A 374 ASN LEU SER MET ASN PRO MET LEU LEU LEU SER GLY ARG SEQRES 25 A 374 THR TRP LYS GLY ALA ILE PHE GLY GLY PHE LYS SER LYS SEQRES 26 A 374 ASP SER VAL PRO LYS LEU VAL ALA ASP PHE MET ALA LYS SEQRES 27 A 374 LYS PHE ALA LEU ASP PRO LEU ILE THR HIS VAL LEU PRO SEQRES 28 A 374 PHE GLU LYS ILE ASN GLU GLY PHE ASP LEU LEU ARG SER SEQRES 29 A 374 GLY GLU SER ILE ARG THR ILE LEU THR PHE SEQRES 1 B 374 SER THR ALA GLY LYS VAL ILE LYS CYS LYS ALA ALA VAL SEQRES 2 B 374 LEU TRP GLU GLU LYS LYS PRO PHE SER ILE GLU GLU VAL SEQRES 3 B 374 GLU VAL ALA PRO PRO LYS ALA HIS GLU VAL ARG ILE LYS SEQRES 4 B 374 MET VAL ALA THR GLY ILE CYS ARG SER ASP ASP GLN VAL SEQRES 5 B 374 VAL SER GLY THR LEU VAL THR PRO LEU PRO VAL ILE ALA SEQRES 6 B 374 GLY HIS GLU ALA ALA GLY ILE VAL GLU SER ILE GLY GLU SEQRES 7 B 374 GLY VAL THR THR VAL ARG PRO GLY ASP LYS VAL ILE PRO SEQRES 8 B 374 LEU PHE THR PRO GLN CYS GLY LYS CYS ARG VAL CYS LYS SEQRES 9 B 374 HIS PRO GLU GLY ASN PHE CYS LEU LYS ASN ASP LEU SER SEQRES 10 B 374 MET PRO ARG GLY THR MET GLN ASP GLY THR SER ARG PHE SEQRES 11 B 374 THR CYS ARG GLY LYS PRO ILE HIS HIS PHE LEU GLY THR SEQRES 12 B 374 SER THR PHE SER GLN TYR THR VAL VAL ASP GLU ILE SER SEQRES 13 B 374 VAL ALA LYS ILE ASP ALA ALA SER PRO LEU GLU LYS VAL SEQRES 14 B 374 CYS LEU ILE GLY CYS GLY PHE SER THR GLY TYR GLY SER SEQRES 15 B 374 ALA VAL LYS VAL ALA LYS VAL THR GLN GLY SER THR CYS SEQRES 16 B 374 ALA VAL PHE GLY LEU GLY GLY VAL GLY LEU SER VAL ILE SEQRES 17 B 374 MET GLY CYS LYS ALA ALA GLY ALA ALA ARG ILE ILE GLY SEQRES 18 B 374 VAL ASP ILE ASN LYS ASP LYS PHE ALA LYS ALA LYS GLU SEQRES 19 B 374 VAL GLY ALA THR GLU CYS VAL ASN PRO GLN ASP TYR LYS SEQRES 20 B 374 LYS PRO ILE GLN GLU VAL LEU THR GLU MET SER ASN GLY SEQRES 21 B 374 GLY VAL ASP PHE SER PHE GLU VAL ILE GLY ARG LEU ASP SEQRES 22 B 374 THR MET VAL THR ALA LEU SER CYS CYS GLN GLU ALA TYR SEQRES 23 B 374 GLY VAL SER VAL ILE VAL GLY VAL PRO PRO ASP SER GLN SEQRES 24 B 374 ASN LEU SER MET ASN PRO MET LEU LEU LEU SER GLY ARG SEQRES 25 B 374 THR TRP LYS GLY ALA ILE PHE GLY GLY PHE LYS SER LYS SEQRES 26 B 374 ASP SER VAL PRO LYS LEU VAL ALA ASP PHE MET ALA LYS SEQRES 27 B 374 LYS PHE ALA LEU ASP PRO LEU ILE THR HIS VAL LEU PRO SEQRES 28 B 374 PHE GLU LYS ILE ASN GLU GLY PHE ASP LEU LEU ARG SER SEQRES 29 B 374 GLY GLU SER ILE ARG THR ILE LEU THR PHE HET ZN A 401 1 HET ZN A 402 1 HET NAJ A 403 44 HET DKA A 404 24 HET MPD A 405 8 HET MPD A 406 8 HET MRD A 407 8 HET ZN B 401 1 HET ZN B 402 1 HET NAJ B 403 44 HET DKA B 404 24 HETNAM ZN ZINC ION HETNAM NAJ NICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM) HETNAM DKA DECANOIC ACID HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM MRD (4R)-2-METHYLPENTANE-2,4-DIOL FORMUL 3 ZN 4(ZN 2+) FORMUL 5 NAJ 2(C21 H27 N7 O14 P2) FORMUL 6 DKA 2(C10 H20 O2) FORMUL 7 MPD 2(C6 H14 O2) FORMUL 9 MRD C6 H14 O2 FORMUL 14 HOH *751(H2 O) HELIX 1 AA1 CYS A 46 SER A 54 1 9 HELIX 2 AA2 CYS A 100 HIS A 105 1 6 HELIX 3 AA3 PRO A 165 CYS A 170 1 6 HELIX 4 AA4 LEU A 171 GLY A 173 5 3 HELIX 5 AA5 CYS A 174 LYS A 185 1 12 HELIX 6 AA6 GLY A 201 ALA A 214 1 14 HELIX 7 AA7 ASN A 225 ASP A 227 5 3 HELIX 8 AA8 LYS A 228 VAL A 235 1 8 HELIX 9 AA9 ASN A 242 TYR A 246 5 5 HELIX 10 AB1 PRO A 249 SER A 258 1 10 HELIX 11 AB2 ARG A 271 CYS A 281 1 11 HELIX 12 AB3 PRO A 305 SER A 310 1 6 HELIX 13 AB4 ILE A 318 PHE A 322 5 5 HELIX 14 AB5 LYS A 323 ALA A 337 1 15 HELIX 15 AB6 LEU A 342 PRO A 344 5 3 HELIX 16 AB7 LYS A 354 SER A 364 1 11 HELIX 17 AB8 CYS B 46 SER B 54 1 9 HELIX 18 AB9 CYS B 100 HIS B 105 1 6 HELIX 19 AC1 PRO B 165 CYS B 170 1 6 HELIX 20 AC2 LEU B 171 GLY B 173 5 3 HELIX 21 AC3 CYS B 174 LYS B 185 1 12 HELIX 22 AC4 GLY B 201 ALA B 214 1 14 HELIX 23 AC5 ASN B 225 ASP B 227 5 3 HELIX 24 AC6 LYS B 228 GLY B 236 1 9 HELIX 25 AC7 ASN B 242 TYR B 246 5 5 HELIX 26 AC8 PRO B 249 SER B 258 1 10 HELIX 27 AC9 ARG B 271 CYS B 282 1 12 HELIX 28 AD1 PRO B 305 SER B 310 1 6 HELIX 29 AD2 ILE B 318 PHE B 322 5 5 HELIX 30 AD3 LYS B 323 ALA B 337 1 15 HELIX 31 AD4 LEU B 342 PRO B 344 5 3 HELIX 32 AD5 LYS B 354 SER B 364 1 11 SHEET 1 AA1 4 ILE A 7 VAL A 13 0 SHEET 2 AA1 4 SER A 22 VAL A 28 -1 O SER A 22 N VAL A 13 SHEET 3 AA1 4 PHE A 130 CYS A 132 -1 O THR A 131 N GLU A 27 SHEET 4 AA1 4 LYS A 135 ILE A 137 -1 O LYS A 135 N CYS A 132 SHEET 1 AA2 5 TYR A 149 ASP A 153 0 SHEET 2 AA2 5 GLU A 35 GLY A 44 -1 N ILE A 38 O THR A 150 SHEET 3 AA2 5 ALA A 69 ILE A 76 -1 O ILE A 72 N LYS A 39 SHEET 4 AA2 5 LYS A 88 PRO A 91 -1 O VAL A 89 N GLY A 71 SHEET 5 AA2 5 VAL A 157 LYS A 159 -1 O ALA A 158 N ILE A 90 SHEET 1 AA3 4 TYR A 149 ASP A 153 0 SHEET 2 AA3 4 GLU A 35 GLY A 44 -1 N ILE A 38 O THR A 150 SHEET 3 AA3 4 ARG A 369 THR A 373 -1 O LEU A 372 N THR A 43 SHEET 4 AA3 4 ILE A 346 PRO A 351 1 N LEU A 350 O ILE A 371 SHEET 1 AA412 GLU A 239 VAL A 241 0 SHEET 2 AA412 ARG A 218 VAL A 222 1 N GLY A 221 O VAL A 241 SHEET 3 AA412 THR A 194 PHE A 198 1 N VAL A 197 O ILE A 220 SHEET 4 AA412 PHE A 264 GLU A 267 1 O PHE A 266 N PHE A 198 SHEET 5 AA412 VAL A 288 ILE A 291 1 O VAL A 290 N SER A 265 SHEET 6 AA412 THR A 313 GLY A 316 1 O LYS A 315 N ILE A 291 SHEET 7 AA412 THR B 313 GLY B 316 -1 O TRP B 314 N TRP A 314 SHEET 8 AA412 VAL B 288 ILE B 291 1 N ILE B 291 O LYS B 315 SHEET 9 AA412 PHE B 264 GLU B 267 1 N SER B 265 O VAL B 290 SHEET 10 AA412 THR B 194 PHE B 198 1 N PHE B 198 O PHE B 266 SHEET 11 AA412 ARG B 218 VAL B 222 1 O ILE B 220 N CYS B 195 SHEET 12 AA412 GLU B 239 VAL B 241 1 O VAL B 241 N GLY B 221 SHEET 1 AA5 2 LEU A 301 MET A 303 0 SHEET 2 AA5 2 LEU B 301 MET B 303 -1 O MET B 303 N LEU A 301 SHEET 1 AA6 4 ILE B 7 VAL B 13 0 SHEET 2 AA6 4 SER B 22 VAL B 28 -1 O SER B 22 N VAL B 13 SHEET 3 AA6 4 PHE B 130 CYS B 132 -1 O THR B 131 N GLU B 27 SHEET 4 AA6 4 LYS B 135 ILE B 137 -1 O LYS B 135 N CYS B 132 SHEET 1 AA7 5 TYR B 149 ASP B 153 0 SHEET 2 AA7 5 GLU B 35 GLY B 44 -1 N ILE B 38 O THR B 150 SHEET 3 AA7 5 ALA B 69 ILE B 76 -1 O ILE B 72 N LYS B 39 SHEET 4 AA7 5 LYS B 88 PRO B 91 -1 O VAL B 89 N GLY B 71 SHEET 5 AA7 5 VAL B 157 LYS B 159 -1 O ALA B 158 N ILE B 90 SHEET 1 AA8 4 TYR B 149 ASP B 153 0 SHEET 2 AA8 4 GLU B 35 GLY B 44 -1 N ILE B 38 O THR B 150 SHEET 3 AA8 4 ARG B 369 THR B 373 -1 O LEU B 372 N THR B 43 SHEET 4 AA8 4 ILE B 346 PRO B 351 1 N LEU B 350 O THR B 373 LINK SG CYS A 46 ZN ZN A 401 1555 1555 2.37 LINK NE2 HIS A 67 ZN ZN A 401 1555 1555 2.03 LINK SG CYS A 97 ZN ZN A 402 1555 1555 2.32 LINK SG CYS A 100 ZN ZN A 402 1555 1555 2.32 LINK SG CYS A 103 ZN ZN A 402 1555 1555 2.34 LINK SG CYS A 111 ZN ZN A 402 1555 1555 2.36 LINK SG CYS A 174 ZN ZN A 401 1555 1555 2.26 LINK ZN ZN A 401 O1 BDKA A 404 1555 1555 2.15 LINK ZN ZN A 401 O2 ADKA A 404 1555 1555 1.96 LINK SG CYS B 46 ZN ZN B 401 1555 1555 2.35 LINK NE2 HIS B 67 ZN ZN B 401 1555 1555 2.01 LINK SG CYS B 97 ZN ZN B 402 1555 1555 2.30 LINK SG CYS B 100 ZN ZN B 402 1555 1555 2.30 LINK SG CYS B 103 ZN ZN B 402 1555 1555 2.39 LINK SG CYS B 111 ZN ZN B 402 1555 1555 2.39 LINK SG CYS B 174 ZN ZN B 401 1555 1555 2.31 LINK ZN ZN B 401 O1 ADKA B 404 1555 1555 2.00 LINK ZN ZN B 401 O2 BDKA B 404 1555 1555 2.03 CISPEP 1 LEU A 61 PRO A 62 0 -1.57 CISPEP 2 LEU B 61 PRO B 62 0 1.00 CRYST1 44.240 51.250 92.460 92.01 102.87 109.91 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022604 0.008187 0.006201 0.00000 SCALE2 0.000000 0.020753 0.002530 0.00000 SCALE3 0.000000 0.000000 0.011176 0.00000