HEADER SIGNALING PROTEIN/INHIBITOR 21-FEB-23 8G9P TITLE TRICOMPLEX OF RMC-4998, KRAS G12C, AND CYPA COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTPASE KRAS; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: K-RAS 2,KI-RAS,C-K-RAS,C-KI-RAS; COMPND 5 EC: 3.6.5.2; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A; COMPND 10 CHAIN: C, D; COMPND 11 SYNONYM: PPIASE A,CYCLOPHILIN A,CYCLOSPORIN A-BINDING PROTEIN, COMPND 12 ROTAMASE A; COMPND 13 EC: 5.2.1.8; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KRAS, KRAS2, RASK2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: PPIA, CYPA; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS INHIBITOR, COMPLEX, SMALL GTPASE, CANCER, TRICOMPLEX, SIGNALING KEYWDS 2 PROTEIN-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.C.A.TOMLINSON,M.SALDAJENO-CONCAR,J.E.KNOX,J.K.YANO REVDAT 3 30-AUG-23 8G9P 1 JRNL REVDAT 2 23-AUG-23 8G9P 1 COMPND SOURCE DBREF SEQADV REVDAT 1 16-AUG-23 8G9P 0 JRNL AUTH C.J.SCHULZE,K.J.SEAMON,Y.ZHAO,Y.C.YANG,J.CREGG,D.KIM, JRNL AUTH 2 A.TOMLINSON,T.J.CHOY,Z.WANG,B.SANG,Y.POURFARJAM,J.LUCAS, JRNL AUTH 3 A.CUEVAS-NAVARRO,C.AYALA-SANTOS,A.VIDES,C.LI,A.MARQUEZ, JRNL AUTH 4 M.ZHONG,V.VEMULAPALLI,C.WELLER,A.GOULD,D.M.WHALEN, JRNL AUTH 5 A.SALVADOR,A.MILIN,M.SALDAJENO-CONCAR,N.DINGLASAN,A.CHEN, JRNL AUTH 6 J.EVANS,J.E.KNOX,E.S.KOLTUN,M.SINGH,R.NICHOLS,D.WILDES, JRNL AUTH 7 A.L.GILL,J.A.M.SMITH,P.LITO JRNL TITL CHEMICAL REMODELING OF A CELLULAR CHAPERONE TO TARGET THE JRNL TITL 2 ACTIVE STATE OF MUTANT KRAS. JRNL REF SCIENCE V. 381 794 2023 JRNL REFN ESSN 1095-9203 JRNL PMID 37590355 JRNL DOI 10.1126/SCIENCE.ADG9652 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.43 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 3 NUMBER OF REFLECTIONS : 94574 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 4754 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.4300 - 4.6600 0.94 3084 170 0.1506 0.1875 REMARK 3 2 4.6600 - 3.7000 0.94 3057 160 0.1276 0.1429 REMARK 3 3 3.7000 - 3.2300 0.97 3171 151 0.1350 0.1428 REMARK 3 4 3.2300 - 2.9400 0.98 3170 170 0.1561 0.1947 REMARK 3 5 2.9400 - 2.7300 0.98 3148 170 0.1631 0.1859 REMARK 3 6 2.7300 - 2.5600 0.88 2816 163 0.1671 0.1874 REMARK 3 7 2.5600 - 2.4400 0.93 3008 134 0.1614 0.2080 REMARK 3 8 2.4400 - 2.3300 0.95 3074 158 0.1637 0.1847 REMARK 3 9 2.3300 - 2.2400 0.96 3104 163 0.1541 0.1940 REMARK 3 10 2.2400 - 2.1600 0.96 3068 187 0.1655 0.1850 REMARK 3 11 2.1600 - 2.1000 0.96 3095 155 0.1622 0.2053 REMARK 3 12 2.1000 - 2.0400 0.96 3121 152 0.1531 0.1967 REMARK 3 13 2.0400 - 1.9800 0.96 3125 138 0.1580 0.1862 REMARK 3 14 1.9800 - 1.9300 0.96 3077 159 0.1518 0.1821 REMARK 3 15 1.9300 - 1.8900 0.96 3097 153 0.1558 0.2148 REMARK 3 16 1.8900 - 1.8500 0.84 2648 151 0.1759 0.2135 REMARK 3 17 1.8500 - 1.8100 0.91 2969 146 0.1866 0.1861 REMARK 3 18 1.8100 - 1.7800 0.93 2984 173 0.1903 0.2494 REMARK 3 19 1.7800 - 1.7500 0.94 3011 162 0.1990 0.2351 REMARK 3 20 1.7500 - 1.7200 0.94 2984 179 0.1609 0.2029 REMARK 3 21 1.7200 - 1.6900 0.94 3046 158 0.1615 0.1907 REMARK 3 22 1.6900 - 1.6600 0.94 3001 158 0.1570 0.1879 REMARK 3 23 1.6600 - 1.6400 0.94 3071 161 0.1622 0.2108 REMARK 3 24 1.6400 - 1.6200 0.95 3032 159 0.1694 0.2148 REMARK 3 25 1.6200 - 1.5900 0.95 3058 153 0.1681 0.2172 REMARK 3 26 1.5900 - 1.5700 0.94 2979 197 0.1675 0.2313 REMARK 3 27 1.5700 - 1.5500 0.92 2925 166 0.1722 0.2320 REMARK 3 28 1.5500 - 1.5300 0.92 2927 177 0.1771 0.2177 REMARK 3 29 1.5300 - 1.5200 0.83 2697 137 0.1828 0.2384 REMARK 3 30 1.5200 - 1.5000 0.72 2273 94 0.1895 0.2052 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.138 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.642 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.76 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 5768 REMARK 3 ANGLE : 1.215 7829 REMARK 3 CHIRALITY : 0.065 830 REMARK 3 PLANARITY : 0.011 1017 REMARK 3 DIHEDRAL : 14.308 2186 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 21.0208 -13.9746 1.6336 REMARK 3 T TENSOR REMARK 3 T11: 0.1391 T22: 0.0964 REMARK 3 T33: 0.1297 T12: -0.0067 REMARK 3 T13: 0.0260 T23: -0.0110 REMARK 3 L TENSOR REMARK 3 L11: 1.1764 L22: 0.6271 REMARK 3 L33: 1.3892 L12: -0.1641 REMARK 3 L13: -0.5151 L23: -0.2547 REMARK 3 S TENSOR REMARK 3 S11: 0.0655 S12: 0.0691 S13: 0.0397 REMARK 3 S21: -0.0709 S22: -0.0143 S23: -0.0326 REMARK 3 S31: -0.1116 S32: 0.0200 S33: -0.0592 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 20.3611 -31.7785 28.8681 REMARK 3 T TENSOR REMARK 3 T11: 0.1065 T22: 0.0952 REMARK 3 T33: 0.1537 T12: 0.0030 REMARK 3 T13: 0.0198 T23: -0.0055 REMARK 3 L TENSOR REMARK 3 L11: 0.7881 L22: 1.2008 REMARK 3 L33: 1.1990 L12: 0.3317 REMARK 3 L13: 0.4213 L23: -0.1150 REMARK 3 S TENSOR REMARK 3 S11: 0.0331 S12: 0.0148 S13: -0.0424 REMARK 3 S21: 0.0202 S22: 0.0325 S23: -0.0225 REMARK 3 S31: 0.0210 S32: 0.0057 S33: -0.0668 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): 42.9071 -7.9819 34.6126 REMARK 3 T TENSOR REMARK 3 T11: 0.0994 T22: 0.0801 REMARK 3 T33: 0.1404 T12: -0.0071 REMARK 3 T13: 0.0157 T23: 0.0102 REMARK 3 L TENSOR REMARK 3 L11: 1.0618 L22: 0.9350 REMARK 3 L33: 1.2802 L12: -0.0082 REMARK 3 L13: -0.1164 L23: 0.1978 REMARK 3 S TENSOR REMARK 3 S11: -0.0109 S12: 0.0236 S13: 0.0809 REMARK 3 S21: 0.0460 S22: -0.0107 S23: -0.0305 REMARK 3 S31: -0.0139 S32: 0.0504 S33: 0.0196 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN D REMARK 3 ORIGIN FOR THE GROUP (A): 44.1508 -37.9204 -4.7737 REMARK 3 T TENSOR REMARK 3 T11: 0.1301 T22: 0.1076 REMARK 3 T33: 0.1604 T12: 0.0123 REMARK 3 T13: 0.0250 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 0.9967 L22: 1.0426 REMARK 3 L33: 1.4669 L12: -0.1315 REMARK 3 L13: 0.2797 L23: 0.3105 REMARK 3 S TENSOR REMARK 3 S11: -0.0316 S12: -0.0528 S13: -0.0931 REMARK 3 S21: 0.0116 S22: 0.0453 S23: -0.0246 REMARK 3 S31: 0.0817 S32: 0.0627 S33: -0.0144 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8G9P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-FEB-23. REMARK 100 THE DEPOSITION ID IS D_1000272397. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-SEP-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03317 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 94582 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 43.430 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.05936 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.5500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.32820 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.440 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG 3350, 100 MM NACL, PH 5.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 50.88000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER C 0 REMARK 465 MET C 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 336 O HOH C 464 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 36 -64.35 -93.33 REMARK 500 GLU A 37 136.17 -170.57 REMARK 500 LYS A 117 32.47 71.81 REMARK 500 ILE B 36 -63.51 -93.88 REMARK 500 PHE C 60 -68.39 -132.63 REMARK 500 ASN C 71 10.94 -142.84 REMARK 500 LYS C 133 -71.66 -93.47 REMARK 500 PHE D 60 -71.54 -131.72 REMARK 500 ASN D 71 14.81 -143.63 REMARK 500 LYS D 133 -62.26 -95.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 553 DISTANCE = 7.52 ANGSTROMS REMARK 525 HOH C 577 DISTANCE = 6.59 ANGSTROMS REMARK 525 HOH D 540 DISTANCE = 5.92 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 17 OG REMARK 620 2 THR A 35 OG1 82.5 REMARK 620 3 GNP A 201 O1G 171.5 91.3 REMARK 620 4 GNP A 201 O2B 93.6 174.4 92.9 REMARK 620 5 HOH A 316 O 81.5 88.0 92.5 95.5 REMARK 620 6 HOH A 343 O 93.5 90.2 92.3 85.9 174.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 17 OG REMARK 620 2 THR B 35 OG1 84.1 REMARK 620 3 GNP B 201 O1G 173.0 91.2 REMARK 620 4 GNP B 201 O2B 91.2 173.7 93.9 REMARK 620 5 HOH B 318 O 83.5 92.1 91.5 91.5 REMARK 620 6 HOH B 343 O 89.5 89.0 95.7 86.7 172.7 REMARK 620 N 1 2 3 4 5 DBREF 8G9P A 1 169 UNP P01116 RASK_HUMAN 1 169 DBREF 8G9P B 1 169 UNP P01116 RASK_HUMAN 1 169 DBREF 8G9P C 1 165 UNP P62937 PPIA_HUMAN 1 165 DBREF 8G9P D 1 165 UNP P62937 PPIA_HUMAN 1 165 SEQADV 8G9P SER A 0 UNP P01116 EXPRESSION TAG SEQADV 8G9P CYS A 12 UNP P01116 GLY 12 ENGINEERED MUTATION SEQADV 8G9P SER B 0 UNP P01116 EXPRESSION TAG SEQADV 8G9P CYS B 12 UNP P01116 GLY 12 ENGINEERED MUTATION SEQADV 8G9P SER C 0 UNP P62937 EXPRESSION TAG SEQADV 8G9P SER D 0 UNP P62937 EXPRESSION TAG SEQRES 1 A 170 SER MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA CYS SEQRES 2 A 170 GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN SEQRES 3 A 170 ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SEQRES 4 A 170 SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CYS SEQRES 5 A 170 LEU LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU TYR SEQRES 6 A 170 SER ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY SEQRES 7 A 170 PHE LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE SEQRES 8 A 170 GLU ASP ILE HIS HIS TYR ARG GLU GLN ILE LYS ARG VAL SEQRES 9 A 170 LYS ASP SER GLU ASP VAL PRO MET VAL LEU VAL GLY ASN SEQRES 10 A 170 LYS CYS ASP LEU PRO SER ARG THR VAL ASP THR LYS GLN SEQRES 11 A 170 ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO PHE ILE SEQRES 12 A 170 GLU THR SER ALA LYS THR ARG GLN GLY VAL ASP ASP ALA SEQRES 13 A 170 PHE TYR THR LEU VAL ARG GLU ILE ARG LYS HIS LYS GLU SEQRES 14 A 170 LYS SEQRES 1 B 170 SER MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA CYS SEQRES 2 B 170 GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN SEQRES 3 B 170 ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SEQRES 4 B 170 SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CYS SEQRES 5 B 170 LEU LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU TYR SEQRES 6 B 170 SER ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY SEQRES 7 B 170 PHE LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE SEQRES 8 B 170 GLU ASP ILE HIS HIS TYR ARG GLU GLN ILE LYS ARG VAL SEQRES 9 B 170 LYS ASP SER GLU ASP VAL PRO MET VAL LEU VAL GLY ASN SEQRES 10 B 170 LYS CYS ASP LEU PRO SER ARG THR VAL ASP THR LYS GLN SEQRES 11 B 170 ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO PHE ILE SEQRES 12 B 170 GLU THR SER ALA LYS THR ARG GLN GLY VAL ASP ASP ALA SEQRES 13 B 170 PHE TYR THR LEU VAL ARG GLU ILE ARG LYS HIS LYS GLU SEQRES 14 B 170 LYS SEQRES 1 C 166 SER MET VAL ASN PRO THR VAL PHE PHE ASP ILE ALA VAL SEQRES 2 C 166 ASP GLY GLU PRO LEU GLY ARG VAL SER PHE GLU LEU PHE SEQRES 3 C 166 ALA ASP LYS VAL PRO LYS THR ALA GLU ASN PHE ARG ALA SEQRES 4 C 166 LEU SER THR GLY GLU LYS GLY PHE GLY TYR LYS GLY SER SEQRES 5 C 166 CYS PHE HIS ARG ILE ILE PRO GLY PHE MET CYS GLN GLY SEQRES 6 C 166 GLY ASP PHE THR ARG HIS ASN GLY THR GLY GLY LYS SER SEQRES 7 C 166 ILE TYR GLY GLU LYS PHE GLU ASP GLU ASN PHE ILE LEU SEQRES 8 C 166 LYS HIS THR GLY PRO GLY ILE LEU SER MET ALA ASN ALA SEQRES 9 C 166 GLY PRO ASN THR ASN GLY SER GLN PHE PHE ILE CYS THR SEQRES 10 C 166 ALA LYS THR GLU TRP LEU ASP GLY LYS HIS VAL VAL PHE SEQRES 11 C 166 GLY LYS VAL LYS GLU GLY MET ASN ILE VAL GLU ALA MET SEQRES 12 C 166 GLU ARG PHE GLY SER ARG ASN GLY LYS THR SER LYS LYS SEQRES 13 C 166 ILE THR ILE ALA ASP CYS GLY GLN LEU GLU SEQRES 1 D 166 SER MET VAL ASN PRO THR VAL PHE PHE ASP ILE ALA VAL SEQRES 2 D 166 ASP GLY GLU PRO LEU GLY ARG VAL SER PHE GLU LEU PHE SEQRES 3 D 166 ALA ASP LYS VAL PRO LYS THR ALA GLU ASN PHE ARG ALA SEQRES 4 D 166 LEU SER THR GLY GLU LYS GLY PHE GLY TYR LYS GLY SER SEQRES 5 D 166 CYS PHE HIS ARG ILE ILE PRO GLY PHE MET CYS GLN GLY SEQRES 6 D 166 GLY ASP PHE THR ARG HIS ASN GLY THR GLY GLY LYS SER SEQRES 7 D 166 ILE TYR GLY GLU LYS PHE GLU ASP GLU ASN PHE ILE LEU SEQRES 8 D 166 LYS HIS THR GLY PRO GLY ILE LEU SER MET ALA ASN ALA SEQRES 9 D 166 GLY PRO ASN THR ASN GLY SER GLN PHE PHE ILE CYS THR SEQRES 10 D 166 ALA LYS THR GLU TRP LEU ASP GLY LYS HIS VAL VAL PHE SEQRES 11 D 166 GLY LYS VAL LYS GLU GLY MET ASN ILE VAL GLU ALA MET SEQRES 12 D 166 GLU ARG PHE GLY SER ARG ASN GLY LYS THR SER LYS LYS SEQRES 13 D 166 ILE THR ILE ALA ASP CYS GLY GLN LEU GLU HET GNP A 201 32 HET MG A 202 1 HET CL A 203 1 HET GNP B 201 32 HET MG B 202 1 HET CL B 203 1 HET YV2 C 201 72 HET YV2 D 201 72 HETNAM GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION HETNAM YV2 (2S)-2-{(5S)-7-[(2E)-4-(DIMETHYLAMINO)-4-METHYLPENT-2- HETNAM 2 YV2 ENOYL]-1-OXO-2,7-DIAZASPIRO[4.4]NONAN-2-YL}-N-[(1P,8S, HETNAM 3 YV2 10R,14S,21M)-22-ETHYL-21-{2-[(1S)-1- HETNAM 4 YV2 METHOXYETHYL]PYRIDIN-3-YL}-18,18-DIMETHYL-9,15-DIOXO- HETNAM 5 YV2 16-OXA-10,22,28-TRIAZAPENTACYCLO[18.5.2.1~2,6~.1~10, HETNAM 6 YV2 14~.0~23,27~]NONACOSA-1(25),2(29),3,5,20,23,26- HETNAM 7 YV2 HEPTAEN-8-YL]-3-METHYLBUTANAMIDE (NON-PREFERRED NAME) FORMUL 5 GNP 2(C10 H17 N6 O13 P3) FORMUL 6 MG 2(MG 2+) FORMUL 7 CL 2(CL 1-) FORMUL 11 YV2 2(C57 H76 N8 O7) FORMUL 13 HOH *999(H2 O) HELIX 1 AA1 GLY A 15 ASN A 26 1 12 HELIX 2 AA2 TYR A 64 GLY A 75 1 12 HELIX 3 AA3 ASN A 86 ASP A 92 1 7 HELIX 4 AA4 ASP A 92 ASP A 105 1 14 HELIX 5 AA5 ASP A 126 GLY A 138 1 13 HELIX 6 AA6 GLY A 151 LYS A 169 1 19 HELIX 7 AA7 GLY B 15 ASN B 26 1 12 HELIX 8 AA8 TYR B 64 GLY B 75 1 12 HELIX 9 AA9 ASN B 86 ASP B 92 1 7 HELIX 10 AB1 ASP B 92 ASP B 105 1 14 HELIX 11 AB2 ASP B 126 GLY B 138 1 13 HELIX 12 AB3 GLY B 151 LYS B 169 1 19 HELIX 13 AB4 VAL C 29 GLY C 42 1 14 HELIX 14 AB5 THR C 119 ASP C 123 5 5 HELIX 15 AB6 GLY C 135 PHE C 145 1 11 HELIX 16 AB7 VAL D 29 GLY D 42 1 14 HELIX 17 AB8 THR D 119 ASP D 123 5 5 HELIX 18 AB9 GLY D 135 ARG D 144 1 10 SHEET 1 AA1 6 GLU A 37 ILE A 46 0 SHEET 2 AA1 6 GLU A 49 THR A 58 -1 O LEU A 53 N LYS A 42 SHEET 3 AA1 6 THR A 2 GLY A 10 1 N TYR A 4 O ASP A 54 SHEET 4 AA1 6 GLY A 77 ALA A 83 1 O LEU A 79 N VAL A 9 SHEET 5 AA1 6 MET A 111 ASN A 116 1 O ASN A 116 N PHE A 82 SHEET 6 AA1 6 PHE A 141 GLU A 143 1 O ILE A 142 N LEU A 113 SHEET 1 AA2 6 GLU B 37 ILE B 46 0 SHEET 2 AA2 6 GLU B 49 THR B 58 -1 O CYS B 51 N VAL B 44 SHEET 3 AA2 6 THR B 2 GLY B 10 1 N LEU B 6 O ASP B 54 SHEET 4 AA2 6 GLY B 77 ALA B 83 1 O VAL B 81 N VAL B 9 SHEET 5 AA2 6 MET B 111 ASN B 116 1 O ASN B 116 N PHE B 82 SHEET 6 AA2 6 PHE B 141 GLU B 143 1 O ILE B 142 N GLY B 115 SHEET 1 AA3 8 ARG C 55 ILE C 57 0 SHEET 2 AA3 8 MET C 61 GLY C 64 -1 O GLN C 63 N ARG C 55 SHEET 3 AA3 8 PHE C 112 CYS C 115 -1 O ILE C 114 N CYS C 62 SHEET 4 AA3 8 ILE C 97 MET C 100 -1 N ILE C 97 O CYS C 115 SHEET 5 AA3 8 VAL C 128 VAL C 132 -1 O GLY C 130 N LEU C 98 SHEET 6 AA3 8 GLU C 15 LEU C 24 -1 N GLU C 23 O LYS C 131 SHEET 7 AA3 8 THR C 5 VAL C 12 -1 N ILE C 10 O LEU C 17 SHEET 8 AA3 8 ILE C 156 LEU C 164 -1 O ASP C 160 N ASP C 9 SHEET 1 AA4 8 ARG D 55 ILE D 57 0 SHEET 2 AA4 8 MET D 61 GLY D 64 -1 O GLN D 63 N ARG D 55 SHEET 3 AA4 8 PHE D 112 CYS D 115 -1 O PHE D 112 N GLY D 64 SHEET 4 AA4 8 ILE D 97 MET D 100 -1 N ILE D 97 O CYS D 115 SHEET 5 AA4 8 VAL D 128 VAL D 132 -1 O GLY D 130 N LEU D 98 SHEET 6 AA4 8 GLU D 15 LEU D 24 -1 N GLU D 23 O LYS D 131 SHEET 7 AA4 8 THR D 5 VAL D 12 -1 N ILE D 10 O LEU D 17 SHEET 8 AA4 8 ILE D 156 LEU D 164 -1 O ASP D 160 N ASP D 9 LINK SG CYS A 12 C29 YV2 D 201 1555 1555 1.82 LINK SG CYS B 12 C29 YV2 C 201 1555 1555 1.82 LINK OG SER A 17 MG MG A 202 1555 1555 2.09 LINK OG1 THR A 35 MG MG A 202 1555 1555 2.04 LINK O1G GNP A 201 MG MG A 202 1555 1555 2.00 LINK O2B GNP A 201 MG MG A 202 1555 1555 2.03 LINK MG MG A 202 O HOH A 316 1555 1555 2.09 LINK MG MG A 202 O HOH A 343 1555 1555 2.08 LINK OG SER B 17 MG MG B 202 1555 1555 2.08 LINK OG1 THR B 35 MG MG B 202 1555 1555 2.06 LINK O1G GNP B 201 MG MG B 202 1555 1555 1.97 LINK O2B GNP B 201 MG MG B 202 1555 1555 2.11 LINK MG MG B 202 O HOH B 318 1555 1555 2.15 LINK MG MG B 202 O HOH B 343 1555 1555 2.10 CRYST1 48.030 101.760 66.360 90.00 91.04 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020820 0.000000 0.000378 0.00000 SCALE2 0.000000 0.009827 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015072 0.00000