data_8GBY # _entry.id 8GBY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.373 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8GBY pdb_00008gby 10.2210/pdb8gby/pdb WWPDB D_1000272567 ? ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 8GBV PDB . unspecified 8GBW PDB . unspecified 8GBX PDB . unspecified 8GBZ PDB . unspecified 8GC0 PDB . unspecified 8GC1 PDB . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8GBY _pdbx_database_status.recvd_initial_deposition_date 2023-02-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Murrell, S.' 1 ? 'Omorodion, O.' 2 0000-0002-7352-6279 'Wilson, I.A.' 3 0000-0002-6469-2419 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Plos Pathog.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1553-7374 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 19 _citation.language ? _citation.page_first e1011416 _citation.page_last e1011416 _citation.title ;Antigen pressure from two founder viruses induces multiple insertions at a single antibody position to generate broadly neutralizing HIV antibodies. ; _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1371/journal.ppat.1011416 _citation.pdbx_database_id_PubMed 37384622 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Joyce, C.' 1 0000-0002-8739-3219 primary 'Murrell, S.' 2 ? primary 'Murrell, B.' 3 ? primary 'Omorodion, O.' 4 ? primary 'Ver, L.S.' 5 ? primary 'Carrico, N.' 6 ? primary 'Bastidas, R.' 7 ? primary 'Nedellec, R.' 8 ? primary 'Bick, M.' 9 ? primary 'Woehl, J.' 10 ? primary 'Zhao, F.' 11 ? primary 'Burns, A.' 12 ? primary 'Barman, S.' 13 ? primary 'Appel, M.' 14 ? primary 'Ramos, A.' 15 ? primary 'Wickramasinghe, L.' 16 ? primary 'Eren, K.' 17 ? primary 'Vollbrecht, T.' 18 ? primary 'Smith, D.M.' 19 ? primary 'Kosakovsky Pond, S.L.' 20 ? primary 'McBride, R.' 21 ? primary 'Worth, C.' 22 ? primary 'Batista, F.' 23 ? primary 'Sok, D.' 24 ? primary 'Poignard, P.' 25 ? primary 'Briney, B.' 26 ? primary 'Wilson, I.A.' 27 ? primary 'Landais, E.' 28 0000-0002-8183-5565 primary 'Burton, D.R.' 29 0000-0001-6711-9864 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8GBY _cell.details ? _cell.formula_units_Z ? _cell.length_a 53.067 _cell.length_a_esd ? _cell.length_b 68.107 _cell.length_b_esd ? _cell.length_c 128.808 _cell.length_c_esd ? _cell.volume 465542.275 _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8GBY _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PC39-50E Fab heavy chain' 25424.508 1 ? ? ? ? 2 polymer man 'PC39-50E Fab light chain' 23751.426 1 ? ? ? ;N-terminal residue pair "VH" originates from the signal peptide ; 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 water nat water 18.015 8 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;QVQLKQWGAGLLKPSETLSLTCAIYGESFTGSWNDQLWNWIRQPPGKGLEWIGEINHSGDIKYASSLKSRATVSADRSKN QFSLKLRSVSGADTATYYCARGRRAVRWWAVEPPANYGFDVWSQGTPVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCL VKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD ; ;QVQLKQWGAGLLKPSETLSLTCAIYGESFTGSWNDQLWNWIRQPPGKGLEWIGEINHSGDIKYASSLKSRATVSADRSKN QFSLKLRSVSGADTATYYCARGRRAVRWWAVEPPANYGFDVWSQGTPVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCL VKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD ; H ? 2 'polypeptide(L)' no no ;VHEIVLTQSPGTLSLSPGEKATLSCRASQSIASTYLAWYQQKPGQAPRLLLHQGYNRATGIPDRFSGSGSGTVYTLTISG LEPDDFAVYYCQHLGTSPPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC ; ;VHEIVLTQSPGTLSLSPGEKATLSCRASQSIASTYLAWYQQKPGQAPRLLLHQGYNRATGIPDRFSGSGSGTVYTLTISG LEPDDFAVYYCQHLGTSPPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC ; L ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 VAL n 1 3 GLN n 1 4 LEU n 1 5 LYS n 1 6 GLN n 1 7 TRP n 1 8 GLY n 1 9 ALA n 1 10 GLY n 1 11 LEU n 1 12 LEU n 1 13 LYS n 1 14 PRO n 1 15 SER n 1 16 GLU n 1 17 THR n 1 18 LEU n 1 19 SER n 1 20 LEU n 1 21 THR n 1 22 CYS n 1 23 ALA n 1 24 ILE n 1 25 TYR n 1 26 GLY n 1 27 GLU n 1 28 SER n 1 29 PHE n 1 30 THR n 1 31 GLY n 1 32 SER n 1 33 TRP n 1 34 ASN n 1 35 ASP n 1 36 GLN n 1 37 LEU n 1 38 TRP n 1 39 ASN n 1 40 TRP n 1 41 ILE n 1 42 ARG n 1 43 GLN n 1 44 PRO n 1 45 PRO n 1 46 GLY n 1 47 LYS n 1 48 GLY n 1 49 LEU n 1 50 GLU n 1 51 TRP n 1 52 ILE n 1 53 GLY n 1 54 GLU n 1 55 ILE n 1 56 ASN n 1 57 HIS n 1 58 SER n 1 59 GLY n 1 60 ASP n 1 61 ILE n 1 62 LYS n 1 63 TYR n 1 64 ALA n 1 65 SER n 1 66 SER n 1 67 LEU n 1 68 LYS n 1 69 SER n 1 70 ARG n 1 71 ALA n 1 72 THR n 1 73 VAL n 1 74 SER n 1 75 ALA n 1 76 ASP n 1 77 ARG n 1 78 SER n 1 79 LYS n 1 80 ASN n 1 81 GLN n 1 82 PHE n 1 83 SER n 1 84 LEU n 1 85 LYS n 1 86 LEU n 1 87 ARG n 1 88 SER n 1 89 VAL n 1 90 SER n 1 91 GLY n 1 92 ALA n 1 93 ASP n 1 94 THR n 1 95 ALA n 1 96 THR n 1 97 TYR n 1 98 TYR n 1 99 CYS n 1 100 ALA n 1 101 ARG n 1 102 GLY n 1 103 ARG n 1 104 ARG n 1 105 ALA n 1 106 VAL n 1 107 ARG n 1 108 TRP n 1 109 TRP n 1 110 ALA n 1 111 VAL n 1 112 GLU n 1 113 PRO n 1 114 PRO n 1 115 ALA n 1 116 ASN n 1 117 TYR n 1 118 GLY n 1 119 PHE n 1 120 ASP n 1 121 VAL n 1 122 TRP n 1 123 SER n 1 124 GLN n 1 125 GLY n 1 126 THR n 1 127 PRO n 1 128 VAL n 1 129 ILE n 1 130 VAL n 1 131 SER n 1 132 SER n 1 133 ALA n 1 134 SER n 1 135 THR n 1 136 LYS n 1 137 GLY n 1 138 PRO n 1 139 SER n 1 140 VAL n 1 141 PHE n 1 142 PRO n 1 143 LEU n 1 144 ALA n 1 145 PRO n 1 146 SER n 1 147 SER n 1 148 LYS n 1 149 SER n 1 150 THR n 1 151 SER n 1 152 GLY n 1 153 GLY n 1 154 THR n 1 155 ALA n 1 156 ALA n 1 157 LEU n 1 158 GLY n 1 159 CYS n 1 160 LEU n 1 161 VAL n 1 162 LYS n 1 163 ASP n 1 164 TYR n 1 165 PHE n 1 166 PRO n 1 167 GLU n 1 168 PRO n 1 169 VAL n 1 170 THR n 1 171 VAL n 1 172 SER n 1 173 TRP n 1 174 ASN n 1 175 SER n 1 176 GLY n 1 177 ALA n 1 178 LEU n 1 179 THR n 1 180 SER n 1 181 GLY n 1 182 VAL n 1 183 HIS n 1 184 THR n 1 185 PHE n 1 186 PRO n 1 187 ALA n 1 188 VAL n 1 189 LEU n 1 190 GLN n 1 191 SER n 1 192 SER n 1 193 GLY n 1 194 LEU n 1 195 TYR n 1 196 SER n 1 197 LEU n 1 198 SER n 1 199 SER n 1 200 VAL n 1 201 VAL n 1 202 THR n 1 203 VAL n 1 204 PRO n 1 205 SER n 1 206 SER n 1 207 SER n 1 208 LEU n 1 209 GLY n 1 210 THR n 1 211 GLN n 1 212 THR n 1 213 TYR n 1 214 ILE n 1 215 CYS n 1 216 ASN n 1 217 VAL n 1 218 ASN n 1 219 HIS n 1 220 LYS n 1 221 PRO n 1 222 SER n 1 223 ASN n 1 224 THR n 1 225 LYS n 1 226 VAL n 1 227 ASP n 1 228 LYS n 1 229 ARG n 1 230 VAL n 1 231 GLU n 1 232 PRO n 1 233 LYS n 1 234 SER n 1 235 CYS n 1 236 ASP n 2 1 VAL n 2 2 HIS n 2 3 GLU n 2 4 ILE n 2 5 VAL n 2 6 LEU n 2 7 THR n 2 8 GLN n 2 9 SER n 2 10 PRO n 2 11 GLY n 2 12 THR n 2 13 LEU n 2 14 SER n 2 15 LEU n 2 16 SER n 2 17 PRO n 2 18 GLY n 2 19 GLU n 2 20 LYS n 2 21 ALA n 2 22 THR n 2 23 LEU n 2 24 SER n 2 25 CYS n 2 26 ARG n 2 27 ALA n 2 28 SER n 2 29 GLN n 2 30 SER n 2 31 ILE n 2 32 ALA n 2 33 SER n 2 34 THR n 2 35 TYR n 2 36 LEU n 2 37 ALA n 2 38 TRP n 2 39 TYR n 2 40 GLN n 2 41 GLN n 2 42 LYS n 2 43 PRO n 2 44 GLY n 2 45 GLN n 2 46 ALA n 2 47 PRO n 2 48 ARG n 2 49 LEU n 2 50 LEU n 2 51 LEU n 2 52 HIS n 2 53 GLN n 2 54 GLY n 2 55 TYR n 2 56 ASN n 2 57 ARG n 2 58 ALA n 2 59 THR n 2 60 GLY n 2 61 ILE n 2 62 PRO n 2 63 ASP n 2 64 ARG n 2 65 PHE n 2 66 SER n 2 67 GLY n 2 68 SER n 2 69 GLY n 2 70 SER n 2 71 GLY n 2 72 THR n 2 73 VAL n 2 74 TYR n 2 75 THR n 2 76 LEU n 2 77 THR n 2 78 ILE n 2 79 SER n 2 80 GLY n 2 81 LEU n 2 82 GLU n 2 83 PRO n 2 84 ASP n 2 85 ASP n 2 86 PHE n 2 87 ALA n 2 88 VAL n 2 89 TYR n 2 90 TYR n 2 91 CYS n 2 92 GLN n 2 93 HIS n 2 94 LEU n 2 95 GLY n 2 96 THR n 2 97 SER n 2 98 PRO n 2 99 PRO n 2 100 TYR n 2 101 THR n 2 102 PHE n 2 103 GLY n 2 104 GLN n 2 105 GLY n 2 106 THR n 2 107 LYS n 2 108 LEU n 2 109 GLU n 2 110 ILE n 2 111 LYS n 2 112 ARG n 2 113 THR n 2 114 VAL n 2 115 ALA n 2 116 ALA n 2 117 PRO n 2 118 SER n 2 119 VAL n 2 120 PHE n 2 121 ILE n 2 122 PHE n 2 123 PRO n 2 124 PRO n 2 125 SER n 2 126 ASP n 2 127 GLU n 2 128 GLN n 2 129 LEU n 2 130 LYS n 2 131 SER n 2 132 GLY n 2 133 THR n 2 134 ALA n 2 135 SER n 2 136 VAL n 2 137 VAL n 2 138 CYS n 2 139 LEU n 2 140 LEU n 2 141 ASN n 2 142 ASN n 2 143 PHE n 2 144 TYR n 2 145 PRO n 2 146 ARG n 2 147 GLU n 2 148 ALA n 2 149 LYS n 2 150 VAL n 2 151 GLN n 2 152 TRP n 2 153 LYS n 2 154 VAL n 2 155 ASP n 2 156 ASN n 2 157 ALA n 2 158 LEU n 2 159 GLN n 2 160 SER n 2 161 GLY n 2 162 ASN n 2 163 SER n 2 164 GLN n 2 165 GLU n 2 166 SER n 2 167 VAL n 2 168 THR n 2 169 GLU n 2 170 GLN n 2 171 ASP n 2 172 SER n 2 173 LYS n 2 174 ASP n 2 175 SER n 2 176 THR n 2 177 TYR n 2 178 SER n 2 179 LEU n 2 180 SER n 2 181 SER n 2 182 THR n 2 183 LEU n 2 184 THR n 2 185 LEU n 2 186 SER n 2 187 LYS n 2 188 ALA n 2 189 ASP n 2 190 TYR n 2 191 GLU n 2 192 LYS n 2 193 HIS n 2 194 LYS n 2 195 VAL n 2 196 TYR n 2 197 ALA n 2 198 CYS n 2 199 GLU n 2 200 VAL n 2 201 THR n 2 202 HIS n 2 203 GLN n 2 204 GLY n 2 205 LEU n 2 206 SER n 2 207 SER n 2 208 PRO n 2 209 VAL n 2 210 THR n 2 211 LYS n 2 212 SER n 2 213 PHE n 2 214 ASN n 2 215 ARG n 2 216 GLY n 2 217 GLU n 2 218 CYS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 236 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 218 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 8GBY 8GBY ? 1 ? 1 2 PDB 8GBY 8GBY ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8GBY H 1 ? 236 ? 8GBY 1 ? 217 ? 1 217 2 2 8GBY L 1 ? 218 ? 8GBY -1 ? 214 ? -1 214 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8GBY _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.37 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 48.03 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2 M sodium formate, 20% PEG 3350' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293.15 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-01-20 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97946 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRL BEAMLINE BL12-2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97946 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL12-2 _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.B_iso_Wilson_estimate 45.28 _reflns.entry_id 8GBY _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.35 _reflns.d_resolution_low 50.0 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 20042 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.5 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.6 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 8.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.05 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.00 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.13 _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.35 _reflns_shell.d_res_low 2.49 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.5 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 3125 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 5.4 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.52 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.74 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 98.9 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 1.09 _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 54.11 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8GBY _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.35 _refine.ls_d_res_low 49.07 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 19969 _refine.ls_number_reflns_R_free 1022 _refine.ls_number_reflns_R_work 18947 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.41 _refine.ls_percent_reflns_R_free 5.12 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2381 _refine.ls_R_factor_R_free 0.2689 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2364 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 33.1229 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3672 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.35 _refine_hist.d_res_low 49.07 _refine_hist.number_atoms_solvent 8 _refine_hist.number_atoms_total 3383 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 3369 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0020 ? 3458 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.5419 ? 4706 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0420 ? 524 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0042 ? 599 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 15.1270 ? 1234 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.35 2.47 . . 139 2621 98.26 . . . . 0.3589 . . . . . . . . . . . 0.3881 'X-RAY DIFFRACTION' 2.48 2.63 . . 148 2674 99.72 . . . . 0.3251 . . . . . . . . . . . 0.3562 'X-RAY DIFFRACTION' 2.63 2.83 . . 149 2651 99.68 . . . . 0.2999 . . . . . . . . . . . 0.3284 'X-RAY DIFFRACTION' 2.83 3.12 . . 132 2706 99.58 . . . . 0.2830 . . . . . . . . . . . 0.3380 'X-RAY DIFFRACTION' 3.12 3.57 . . 141 2703 99.51 . . . . 0.2613 . . . . . . . . . . . 0.2858 'X-RAY DIFFRACTION' 3.57 4.50 . . 143 2744 99.72 . . . . 0.1994 . . . . . . . . . . . 0.2570 'X-RAY DIFFRACTION' 4.50 49.07 . . 170 2848 99.37 . . . . 0.1876 . . . . . . . . . . . 0.2070 # _struct.entry_id 8GBY _struct.title 'Crystal structure of PC39-50E, an anti-HIV broadly neutralizing antibody' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8GBY _struct_keywords.text 'Antibody, Broadly Neutralizing, HIV-1, V3 Glycan, IMMUNE SYSTEM' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 65 ? LYS A 68 ? SER H 61 LYS H 64 5 ? 4 HELX_P HELX_P2 AA2 ARG A 77 ? LYS A 79 ? ARG H 73 LYS H 75 5 ? 3 HELX_P HELX_P3 AA3 SER A 90 ? THR A 94 ? SER H 83 THR H 87 5 ? 5 HELX_P HELX_P4 AA4 SER A 206 ? GLY A 209 ? SER H 187 GLY H 190 5 ? 4 HELX_P HELX_P5 AA5 LYS A 220 ? ASN A 223 ? LYS H 201 ASN H 204 5 ? 4 HELX_P HELX_P6 AA6 ALA B 32 ? THR B 34 ? ALA L 29 THR L 31 5 ? 3 HELX_P HELX_P7 AA7 GLU B 82 ? PHE B 86 ? GLU L 79 PHE L 83 5 ? 5 HELX_P HELX_P8 AA8 SER B 125 ? LYS B 130 ? SER L 121 LYS L 126 1 ? 6 HELX_P HELX_P9 AA9 LYS B 187 ? GLU B 191 ? LYS L 183 GLU L 187 1 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 22 SG ? ? ? 1_555 A CYS 99 SG ? ? H CYS 22 H CYS 92 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf2 disulf ? ? A CYS 159 SG ? ? ? 1_555 A CYS 215 SG ? ? H CYS 140 H CYS 196 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf3 disulf ? ? B CYS 25 SG ? ? ? 1_555 B CYS 91 SG ? ? L CYS 23 L CYS 88 1_555 ? ? ? ? ? ? ? 2.038 ? ? disulf4 disulf ? ? B CYS 138 SG ? ? ? 1_555 B CYS 198 SG ? ? L CYS 134 L CYS 194 1_555 ? ? ? ? ? ? ? 2.031 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PHE 165 A . ? PHE 146 H PRO 166 A ? PRO 147 H 1 -4.54 2 GLU 167 A . ? GLU 148 H PRO 168 A ? PRO 149 H 1 -0.69 3 SER 9 B . ? SER 7 L PRO 10 B ? PRO 8 L 1 -1.30 4 PRO 98 B . ? PRO 95 L PRO 99 B A PRO 95 L 1 4.45 5 TYR 144 B . ? TYR 140 L PRO 145 B ? PRO 141 L 1 3.58 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 6 ? AA3 ? 4 ? AA4 ? 4 ? AA5 ? 4 ? AA6 ? 3 ? AA7 ? 4 ? AA8 ? 6 ? AA9 ? 4 ? AB1 ? 4 ? AB2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA7 3 4 ? anti-parallel AA8 1 2 ? parallel AA8 2 3 ? anti-parallel AA8 3 4 ? anti-parallel AA8 4 5 ? anti-parallel AA8 5 6 ? anti-parallel AA9 1 2 ? parallel AA9 2 3 ? anti-parallel AA9 3 4 ? anti-parallel AB1 1 2 ? anti-parallel AB1 2 3 ? anti-parallel AB1 3 4 ? anti-parallel AB2 1 2 ? anti-parallel AB2 2 3 ? anti-parallel AB2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLN A 3 ? GLY A 8 ? GLN H 3 GLY H 8 AA1 2 LEU A 18 ? TYR A 25 ? LEU H 18 TYR H 25 AA1 3 GLN A 81 ? LEU A 86 ? GLN H 77 LEU H 82 AA1 4 ALA A 71 ? ASP A 76 ? ALA H 67 ASP H 72 AA2 1 LEU A 11 ? LEU A 12 ? LEU H 11 LEU H 12 AA2 2 THR A 126 ? VAL A 130 ? THR H 107 VAL H 111 AA2 3 ALA A 95 ? ARG A 103 ? ALA H 88 ARG H 96 AA2 4 GLN A 36 ? GLN A 43 ? GLN H 32 GLN H 39 AA2 5 GLU A 50 ? ASN A 56 ? GLU H 46 ASN H 52 AA2 6 ILE A 61 ? TYR A 63 ? ILE H 57 TYR H 59 AA3 1 LEU A 11 ? LEU A 12 ? LEU H 11 LEU H 12 AA3 2 THR A 126 ? VAL A 130 ? THR H 107 VAL H 111 AA3 3 ALA A 95 ? ARG A 103 ? ALA H 88 ARG H 96 AA3 4 VAL A 121 ? TRP A 122 ? VAL H 102 TRP H 103 AA4 1 SER A 139 ? LEU A 143 ? SER H 120 LEU H 124 AA4 2 THR A 154 ? TYR A 164 ? THR H 135 TYR H 145 AA4 3 TYR A 195 ? PRO A 204 ? TYR H 176 PRO H 185 AA4 4 VAL A 182 ? THR A 184 ? VAL H 163 THR H 165 AA5 1 SER A 139 ? LEU A 143 ? SER H 120 LEU H 124 AA5 2 THR A 154 ? TYR A 164 ? THR H 135 TYR H 145 AA5 3 TYR A 195 ? PRO A 204 ? TYR H 176 PRO H 185 AA5 4 VAL A 188 ? LEU A 189 ? VAL H 169 LEU H 170 AA6 1 THR A 170 ? TRP A 173 ? THR H 151 TRP H 154 AA6 2 TYR A 213 ? HIS A 219 ? TYR H 194 HIS H 200 AA6 3 THR A 224 ? VAL A 230 ? THR H 205 VAL H 211 AA7 1 LEU B 6 ? SER B 9 ? LEU L 4 SER L 7 AA7 2 ALA B 21 ? ALA B 27 ? ALA L 19 ALA L 25 AA7 3 VAL B 73 ? ILE B 78 ? VAL L 70 ILE L 75 AA7 4 PHE B 65 ? SER B 70 ? PHE L 62 SER L 67 AA8 1 THR B 12 ? LEU B 15 ? THR L 10 LEU L 13 AA8 2 THR B 106 ? ILE B 110 ? THR L 102 ILE L 106 AA8 3 VAL B 88 ? HIS B 93 ? VAL L 85 HIS L 90 AA8 4 LEU B 36 ? GLN B 41 ? LEU L 33 GLN L 38 AA8 5 ARG B 48 ? HIS B 52 ? ARG L 45 HIS L 49 AA8 6 ASN B 56 ? ARG B 57 ? ASN L 53 ARG L 54 AA9 1 THR B 12 ? LEU B 15 ? THR L 10 LEU L 13 AA9 2 THR B 106 ? ILE B 110 ? THR L 102 ILE L 106 AA9 3 VAL B 88 ? HIS B 93 ? VAL L 85 HIS L 90 AA9 4 THR B 101 ? PHE B 102 ? THR L 97 PHE L 98 AB1 1 SER B 118 ? PHE B 122 ? SER L 114 PHE L 118 AB1 2 THR B 133 ? PHE B 143 ? THR L 129 PHE L 139 AB1 3 TYR B 177 ? SER B 186 ? TYR L 173 SER L 182 AB1 4 SER B 163 ? VAL B 167 ? SER L 159 VAL L 163 AB2 1 ALA B 157 ? LEU B 158 ? ALA L 153 LEU L 154 AB2 2 ALA B 148 ? VAL B 154 ? ALA L 144 VAL L 150 AB2 3 VAL B 195 ? HIS B 202 ? VAL L 191 HIS L 198 AB2 4 VAL B 209 ? ASN B 214 ? VAL L 205 ASN L 210 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LYS A 5 ? N LYS H 5 O ALA A 23 ? O ALA H 23 AA1 2 3 N LEU A 18 ? N LEU H 18 O LEU A 86 ? O LEU H 82 AA1 3 4 O GLN A 81 ? O GLN H 77 N ASP A 76 ? N ASP H 72 AA2 1 2 N LEU A 12 ? N LEU H 12 O ILE A 129 ? O ILE H 110 AA2 2 3 O VAL A 128 ? O VAL H 109 N ALA A 95 ? N ALA H 88 AA2 3 4 O GLY A 102 ? O GLY H 95 N LEU A 37 ? N LEU H 33 AA2 4 5 N ARG A 42 ? N ARG H 38 O GLU A 50 ? O GLU H 46 AA2 5 6 N GLU A 54 ? N GLU H 50 O LYS A 62 ? O LYS H 58 AA3 1 2 N LEU A 12 ? N LEU H 12 O ILE A 129 ? O ILE H 110 AA3 2 3 O VAL A 128 ? O VAL H 109 N ALA A 95 ? N ALA H 88 AA3 3 4 N ARG A 101 ? N ARG H 94 O VAL A 121 ? O VAL H 102 AA4 1 2 N PHE A 141 ? N PHE H 122 O LEU A 160 ? O LEU H 141 AA4 2 3 N VAL A 161 ? N VAL H 142 O LEU A 197 ? O LEU H 178 AA4 3 4 O VAL A 200 ? O VAL H 181 N HIS A 183 ? N HIS H 164 AA5 1 2 N PHE A 141 ? N PHE H 122 O LEU A 160 ? O LEU H 141 AA5 2 3 N VAL A 161 ? N VAL H 142 O LEU A 197 ? O LEU H 178 AA5 3 4 O SER A 196 ? O SER H 177 N VAL A 188 ? N VAL H 169 AA6 1 2 N SER A 172 ? N SER H 153 O ASN A 216 ? O ASN H 197 AA6 2 3 N HIS A 219 ? N HIS H 200 O THR A 224 ? O THR H 205 AA7 1 2 N THR B 7 ? N THR L 5 O ARG B 26 ? O ARG L 24 AA7 2 3 N LEU B 23 ? N LEU L 21 O LEU B 76 ? O LEU L 73 AA7 3 4 O THR B 75 ? O THR L 72 N SER B 68 ? N SER L 65 AA8 1 2 N LEU B 13 ? N LEU L 11 O LYS B 107 ? O LYS L 103 AA8 2 3 O THR B 106 ? O THR L 102 N TYR B 89 ? N TYR L 86 AA8 3 4 O VAL B 88 ? O VAL L 85 N GLN B 41 ? N GLN L 38 AA8 4 5 N GLN B 40 ? N GLN L 37 O ARG B 48 ? O ARG L 45 AA8 5 6 N HIS B 52 ? N HIS L 49 O ASN B 56 ? O ASN L 53 AA9 1 2 N LEU B 13 ? N LEU L 11 O LYS B 107 ? O LYS L 103 AA9 2 3 O THR B 106 ? O THR L 102 N TYR B 89 ? N TYR L 86 AA9 3 4 N HIS B 93 ? N HIS L 90 O THR B 101 ? O THR L 97 AB1 1 2 N PHE B 120 ? N PHE L 116 O LEU B 139 ? O LEU L 135 AB1 2 3 N ALA B 134 ? N ALA L 130 O LEU B 185 ? O LEU L 181 AB1 3 4 O THR B 182 ? O THR L 178 N GLN B 164 ? N GLN L 160 AB2 1 2 O ALA B 157 ? O ALA L 153 N VAL B 154 ? N VAL L 150 AB2 2 3 N GLN B 151 ? N GLN L 147 O GLU B 199 ? O GLU L 195 AB2 3 4 N VAL B 200 ? N VAL L 196 O VAL B 209 ? O VAL L 205 # _atom_sites.entry_id 8GBY _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.018844 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014683 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007763 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 1 1 GLN GLN H . n A 1 2 VAL 2 2 2 VAL VAL H . n A 1 3 GLN 3 3 3 GLN GLN H . n A 1 4 LEU 4 4 4 LEU LEU H . n A 1 5 LYS 5 5 5 LYS LYS H . n A 1 6 GLN 6 6 6 GLN GLN H . n A 1 7 TRP 7 7 7 TRP TRP H . n A 1 8 GLY 8 8 8 GLY GLY H . n A 1 9 ALA 9 9 9 ALA ALA H . n A 1 10 GLY 10 10 10 GLY GLY H . n A 1 11 LEU 11 11 11 LEU LEU H . n A 1 12 LEU 12 12 12 LEU LEU H . n A 1 13 LYS 13 13 13 LYS LYS H . n A 1 14 PRO 14 14 14 PRO PRO H . n A 1 15 SER 15 15 15 SER SER H . n A 1 16 GLU 16 16 16 GLU GLU H . n A 1 17 THR 17 17 17 THR THR H . n A 1 18 LEU 18 18 18 LEU LEU H . n A 1 19 SER 19 19 19 SER SER H . n A 1 20 LEU 20 20 20 LEU LEU H . n A 1 21 THR 21 21 21 THR THR H . n A 1 22 CYS 22 22 22 CYS CYS H . n A 1 23 ALA 23 23 23 ALA ALA H . n A 1 24 ILE 24 24 24 ILE ILE H . n A 1 25 TYR 25 25 25 TYR TYR H . n A 1 26 GLY 26 26 26 GLY GLY H . n A 1 27 GLU 27 27 27 GLU GLU H . n A 1 28 SER 28 28 28 SER SER H . n A 1 29 PHE 29 29 29 PHE PHE H . n A 1 30 THR 30 30 30 THR THR H . n A 1 31 GLY 31 31 31 GLY GLY H . n A 1 32 SER 32 31 31 SER SER H A n A 1 33 TRP 33 31 31 TRP TRP H B n A 1 34 ASN 34 31 31 ASN ASN H C n A 1 35 ASP 35 31 31 ASP ASP H D n A 1 36 GLN 36 32 32 GLN GLN H . n A 1 37 LEU 37 33 33 LEU LEU H . n A 1 38 TRP 38 34 34 TRP TRP H . n A 1 39 ASN 39 35 35 ASN ASN H . n A 1 40 TRP 40 36 36 TRP TRP H . n A 1 41 ILE 41 37 37 ILE ILE H . n A 1 42 ARG 42 38 38 ARG ARG H . n A 1 43 GLN 43 39 39 GLN GLN H . n A 1 44 PRO 44 40 40 PRO PRO H . n A 1 45 PRO 45 41 41 PRO PRO H . n A 1 46 GLY 46 42 42 GLY GLY H . n A 1 47 LYS 47 43 43 LYS LYS H . n A 1 48 GLY 48 44 44 GLY GLY H . n A 1 49 LEU 49 45 45 LEU LEU H . n A 1 50 GLU 50 46 46 GLU GLU H . n A 1 51 TRP 51 47 47 TRP TRP H . n A 1 52 ILE 52 48 48 ILE ILE H . n A 1 53 GLY 53 49 49 GLY GLY H . n A 1 54 GLU 54 50 50 GLU GLU H . n A 1 55 ILE 55 51 51 ILE ILE H . n A 1 56 ASN 56 52 52 ASN ASN H . n A 1 57 HIS 57 53 53 HIS HIS H . n A 1 58 SER 58 54 54 SER SER H . n A 1 59 GLY 59 55 55 GLY GLY H . n A 1 60 ASP 60 56 56 ASP ASP H . n A 1 61 ILE 61 57 57 ILE ILE H . n A 1 62 LYS 62 58 58 LYS LYS H . n A 1 63 TYR 63 59 59 TYR TYR H . n A 1 64 ALA 64 60 60 ALA ALA H . n A 1 65 SER 65 61 61 SER SER H . n A 1 66 SER 66 62 62 SER SER H . n A 1 67 LEU 67 63 63 LEU LEU H . n A 1 68 LYS 68 64 64 LYS LYS H . n A 1 69 SER 69 65 65 SER SER H . n A 1 70 ARG 70 66 66 ARG ARG H . n A 1 71 ALA 71 67 67 ALA ALA H . n A 1 72 THR 72 68 68 THR THR H . n A 1 73 VAL 73 69 69 VAL VAL H . n A 1 74 SER 74 70 70 SER SER H . n A 1 75 ALA 75 71 71 ALA ALA H . n A 1 76 ASP 76 72 72 ASP ASP H . n A 1 77 ARG 77 73 73 ARG ARG H . n A 1 78 SER 78 74 74 SER SER H . n A 1 79 LYS 79 75 75 LYS LYS H . n A 1 80 ASN 80 76 76 ASN ASN H . n A 1 81 GLN 81 77 77 GLN GLN H . n A 1 82 PHE 82 78 78 PHE PHE H . n A 1 83 SER 83 79 79 SER SER H . n A 1 84 LEU 84 80 80 LEU LEU H . n A 1 85 LYS 85 81 81 LYS LYS H . n A 1 86 LEU 86 82 82 LEU LEU H . n A 1 87 ARG 87 82 82 ARG ARG H A n A 1 88 SER 88 82 82 SER SER H B n A 1 89 VAL 89 82 82 VAL VAL H C n A 1 90 SER 90 83 83 SER SER H . n A 1 91 GLY 91 84 84 GLY GLY H . n A 1 92 ALA 92 85 85 ALA ALA H . n A 1 93 ASP 93 86 86 ASP ASP H . n A 1 94 THR 94 87 87 THR THR H . n A 1 95 ALA 95 88 88 ALA ALA H . n A 1 96 THR 96 89 89 THR THR H . n A 1 97 TYR 97 90 90 TYR TYR H . n A 1 98 TYR 98 91 91 TYR TYR H . n A 1 99 CYS 99 92 92 CYS CYS H . n A 1 100 ALA 100 93 93 ALA ALA H . n A 1 101 ARG 101 94 94 ARG ARG H . n A 1 102 GLY 102 95 95 GLY GLY H . n A 1 103 ARG 103 96 96 ARG ARG H . n A 1 104 ARG 104 97 97 ARG ARG H . n A 1 105 ALA 105 98 98 ALA ALA H . n A 1 106 VAL 106 99 99 VAL VAL H . n A 1 107 ARG 107 100 100 ARG ARG H . n A 1 108 TRP 108 100 100 TRP TRP H A n A 1 109 TRP 109 100 100 TRP TRP H B n A 1 110 ALA 110 100 100 ALA ALA H C n A 1 111 VAL 111 100 ? ? ? H D n A 1 112 GLU 112 100 ? ? ? H E n A 1 113 PRO 113 100 ? ? ? H F n A 1 114 PRO 114 100 ? ? ? H G n A 1 115 ALA 115 100 100 ALA ALA H H n A 1 116 ASN 116 100 100 ASN ASN H I n A 1 117 TYR 117 100 100 TYR TYR H J n A 1 118 GLY 118 100 100 GLY GLY H K n A 1 119 PHE 119 100 100 PHE PHE H L n A 1 120 ASP 120 101 101 ASP ASP H . n A 1 121 VAL 121 102 102 VAL VAL H . n A 1 122 TRP 122 103 103 TRP TRP H . n A 1 123 SER 123 104 104 SER SER H . n A 1 124 GLN 124 105 105 GLN GLN H . n A 1 125 GLY 125 106 106 GLY GLY H . n A 1 126 THR 126 107 107 THR THR H . n A 1 127 PRO 127 108 108 PRO PRO H . n A 1 128 VAL 128 109 109 VAL VAL H . n A 1 129 ILE 129 110 110 ILE ILE H . n A 1 130 VAL 130 111 111 VAL VAL H . n A 1 131 SER 131 112 112 SER SER H . n A 1 132 SER 132 113 113 SER SER H . n A 1 133 ALA 133 114 114 ALA ALA H . n A 1 134 SER 134 115 115 SER SER H . n A 1 135 THR 135 116 116 THR THR H . n A 1 136 LYS 136 117 117 LYS LYS H . n A 1 137 GLY 137 118 118 GLY GLY H . n A 1 138 PRO 138 119 119 PRO PRO H . n A 1 139 SER 139 120 120 SER SER H . n A 1 140 VAL 140 121 121 VAL VAL H . n A 1 141 PHE 141 122 122 PHE PHE H . n A 1 142 PRO 142 123 123 PRO PRO H . n A 1 143 LEU 143 124 124 LEU LEU H . n A 1 144 ALA 144 125 125 ALA ALA H . n A 1 145 PRO 145 126 126 PRO PRO H . n A 1 146 SER 146 127 127 SER SER H . n A 1 147 SER 147 128 ? ? ? H . n A 1 148 LYS 148 129 ? ? ? H . n A 1 149 SER 149 130 ? ? ? H . n A 1 150 THR 150 131 ? ? ? H . n A 1 151 SER 151 132 ? ? ? H . n A 1 152 GLY 152 133 ? ? ? H . n A 1 153 GLY 153 134 134 GLY GLY H . n A 1 154 THR 154 135 135 THR THR H . n A 1 155 ALA 155 136 136 ALA ALA H . n A 1 156 ALA 156 137 137 ALA ALA H . n A 1 157 LEU 157 138 138 LEU LEU H . n A 1 158 GLY 158 139 139 GLY GLY H . n A 1 159 CYS 159 140 140 CYS CYS H . n A 1 160 LEU 160 141 141 LEU LEU H . n A 1 161 VAL 161 142 142 VAL VAL H . n A 1 162 LYS 162 143 143 LYS LYS H . n A 1 163 ASP 163 144 144 ASP ASP H . n A 1 164 TYR 164 145 145 TYR TYR H . n A 1 165 PHE 165 146 146 PHE PHE H . n A 1 166 PRO 166 147 147 PRO PRO H . n A 1 167 GLU 167 148 148 GLU GLU H . n A 1 168 PRO 168 149 149 PRO PRO H . n A 1 169 VAL 169 150 150 VAL VAL H . n A 1 170 THR 170 151 151 THR THR H . n A 1 171 VAL 171 152 152 VAL VAL H . n A 1 172 SER 172 153 153 SER SER H . n A 1 173 TRP 173 154 154 TRP TRP H . n A 1 174 ASN 174 155 155 ASN ASN H . n A 1 175 SER 175 156 156 SER SER H . n A 1 176 GLY 176 157 157 GLY GLY H . n A 1 177 ALA 177 158 158 ALA ALA H . n A 1 178 LEU 178 159 159 LEU LEU H . n A 1 179 THR 179 160 160 THR THR H . n A 1 180 SER 180 161 161 SER SER H . n A 1 181 GLY 181 162 162 GLY GLY H . n A 1 182 VAL 182 163 163 VAL VAL H . n A 1 183 HIS 183 164 164 HIS HIS H . n A 1 184 THR 184 165 165 THR THR H . n A 1 185 PHE 185 166 166 PHE PHE H . n A 1 186 PRO 186 167 167 PRO PRO H . n A 1 187 ALA 187 168 168 ALA ALA H . n A 1 188 VAL 188 169 169 VAL VAL H . n A 1 189 LEU 189 170 170 LEU LEU H . n A 1 190 GLN 190 171 171 GLN GLN H . n A 1 191 SER 191 172 172 SER SER H . n A 1 192 SER 192 173 173 SER SER H . n A 1 193 GLY 193 174 174 GLY GLY H . n A 1 194 LEU 194 175 175 LEU LEU H . n A 1 195 TYR 195 176 176 TYR TYR H . n A 1 196 SER 196 177 177 SER SER H . n A 1 197 LEU 197 178 178 LEU LEU H . n A 1 198 SER 198 179 179 SER SER H . n A 1 199 SER 199 180 180 SER SER H . n A 1 200 VAL 200 181 181 VAL VAL H . n A 1 201 VAL 201 182 182 VAL VAL H . n A 1 202 THR 202 183 183 THR THR H . n A 1 203 VAL 203 184 184 VAL VAL H . n A 1 204 PRO 204 185 185 PRO PRO H . n A 1 205 SER 205 186 186 SER SER H . n A 1 206 SER 206 187 187 SER SER H . n A 1 207 SER 207 188 188 SER SER H . n A 1 208 LEU 208 189 189 LEU LEU H . n A 1 209 GLY 209 190 190 GLY GLY H . n A 1 210 THR 210 191 191 THR THR H . n A 1 211 GLN 211 192 192 GLN GLN H . n A 1 212 THR 212 193 193 THR THR H . n A 1 213 TYR 213 194 194 TYR TYR H . n A 1 214 ILE 214 195 195 ILE ILE H . n A 1 215 CYS 215 196 196 CYS CYS H . n A 1 216 ASN 216 197 197 ASN ASN H . n A 1 217 VAL 217 198 198 VAL VAL H . n A 1 218 ASN 218 199 199 ASN ASN H . n A 1 219 HIS 219 200 200 HIS HIS H . n A 1 220 LYS 220 201 201 LYS LYS H . n A 1 221 PRO 221 202 202 PRO PRO H . n A 1 222 SER 222 203 203 SER SER H . n A 1 223 ASN 223 204 204 ASN ASN H . n A 1 224 THR 224 205 205 THR THR H . n A 1 225 LYS 225 206 206 LYS LYS H . n A 1 226 VAL 226 207 207 VAL VAL H . n A 1 227 ASP 227 208 208 ASP ASP H . n A 1 228 LYS 228 209 209 LYS LYS H . n A 1 229 ARG 229 210 210 ARG ARG H . n A 1 230 VAL 230 211 211 VAL VAL H . n A 1 231 GLU 231 212 212 GLU GLU H . n A 1 232 PRO 232 213 213 PRO PRO H . n A 1 233 LYS 233 214 214 LYS LYS H . n A 1 234 SER 234 215 ? ? ? H . n A 1 235 CYS 235 216 ? ? ? H . n A 1 236 ASP 236 217 ? ? ? H . n B 2 1 VAL 1 -1 -1 VAL VAL L . n B 2 2 HIS 2 0 0 HIS HIS L . n B 2 3 GLU 3 1 1 GLU GLU L . n B 2 4 ILE 4 2 2 ILE ILE L . n B 2 5 VAL 5 3 3 VAL VAL L . n B 2 6 LEU 6 4 4 LEU LEU L . n B 2 7 THR 7 5 5 THR THR L . n B 2 8 GLN 8 6 6 GLN GLN L . n B 2 9 SER 9 7 7 SER SER L . n B 2 10 PRO 10 8 8 PRO PRO L . n B 2 11 GLY 11 9 9 GLY GLY L . n B 2 12 THR 12 10 10 THR THR L . n B 2 13 LEU 13 11 11 LEU LEU L . n B 2 14 SER 14 12 12 SER SER L . n B 2 15 LEU 15 13 13 LEU LEU L . n B 2 16 SER 16 14 14 SER SER L . n B 2 17 PRO 17 15 15 PRO PRO L . n B 2 18 GLY 18 16 16 GLY GLY L . n B 2 19 GLU 19 17 17 GLU GLU L . n B 2 20 LYS 20 18 18 LYS LYS L . n B 2 21 ALA 21 19 19 ALA ALA L . n B 2 22 THR 22 20 20 THR THR L . n B 2 23 LEU 23 21 21 LEU LEU L . n B 2 24 SER 24 22 22 SER SER L . n B 2 25 CYS 25 23 23 CYS CYS L . n B 2 26 ARG 26 24 24 ARG ARG L . n B 2 27 ALA 27 25 25 ALA ALA L . n B 2 28 SER 28 26 26 SER SER L . n B 2 29 GLN 29 27 27 GLN GLN L . n B 2 30 SER 30 27 27 SER SER L A n B 2 31 ILE 31 28 28 ILE ILE L . n B 2 32 ALA 32 29 29 ALA ALA L . n B 2 33 SER 33 30 30 SER SER L . n B 2 34 THR 34 31 31 THR THR L . n B 2 35 TYR 35 32 32 TYR TYR L . n B 2 36 LEU 36 33 33 LEU LEU L . n B 2 37 ALA 37 34 34 ALA ALA L . n B 2 38 TRP 38 35 35 TRP TRP L . n B 2 39 TYR 39 36 36 TYR TYR L . n B 2 40 GLN 40 37 37 GLN GLN L . n B 2 41 GLN 41 38 38 GLN GLN L . n B 2 42 LYS 42 39 39 LYS LYS L . n B 2 43 PRO 43 40 40 PRO PRO L . n B 2 44 GLY 44 41 41 GLY GLY L . n B 2 45 GLN 45 42 42 GLN GLN L . n B 2 46 ALA 46 43 43 ALA ALA L . n B 2 47 PRO 47 44 44 PRO PRO L . n B 2 48 ARG 48 45 45 ARG ARG L . n B 2 49 LEU 49 46 46 LEU LEU L . n B 2 50 LEU 50 47 47 LEU LEU L . n B 2 51 LEU 51 48 48 LEU LEU L . n B 2 52 HIS 52 49 49 HIS HIS L . n B 2 53 GLN 53 50 50 GLN GLN L . n B 2 54 GLY 54 51 51 GLY GLY L . n B 2 55 TYR 55 52 52 TYR TYR L . n B 2 56 ASN 56 53 53 ASN ASN L . n B 2 57 ARG 57 54 54 ARG ARG L . n B 2 58 ALA 58 55 55 ALA ALA L . n B 2 59 THR 59 56 56 THR THR L . n B 2 60 GLY 60 57 57 GLY GLY L . n B 2 61 ILE 61 58 58 ILE ILE L . n B 2 62 PRO 62 59 59 PRO PRO L . n B 2 63 ASP 63 60 60 ASP ASP L . n B 2 64 ARG 64 61 61 ARG ARG L . n B 2 65 PHE 65 62 62 PHE PHE L . n B 2 66 SER 66 63 63 SER SER L . n B 2 67 GLY 67 64 64 GLY GLY L . n B 2 68 SER 68 65 65 SER SER L . n B 2 69 GLY 69 66 66 GLY GLY L . n B 2 70 SER 70 67 67 SER SER L . n B 2 71 GLY 71 68 68 GLY GLY L . n B 2 72 THR 72 69 69 THR THR L . n B 2 73 VAL 73 70 70 VAL VAL L . n B 2 74 TYR 74 71 71 TYR TYR L . n B 2 75 THR 75 72 72 THR THR L . n B 2 76 LEU 76 73 73 LEU LEU L . n B 2 77 THR 77 74 74 THR THR L . n B 2 78 ILE 78 75 75 ILE ILE L . n B 2 79 SER 79 76 76 SER SER L . n B 2 80 GLY 80 77 77 GLY GLY L . n B 2 81 LEU 81 78 78 LEU LEU L . n B 2 82 GLU 82 79 79 GLU GLU L . n B 2 83 PRO 83 80 80 PRO PRO L . n B 2 84 ASP 84 81 81 ASP ASP L . n B 2 85 ASP 85 82 82 ASP ASP L . n B 2 86 PHE 86 83 83 PHE PHE L . n B 2 87 ALA 87 84 84 ALA ALA L . n B 2 88 VAL 88 85 85 VAL VAL L . n B 2 89 TYR 89 86 86 TYR TYR L . n B 2 90 TYR 90 87 87 TYR TYR L . n B 2 91 CYS 91 88 88 CYS CYS L . n B 2 92 GLN 92 89 89 GLN GLN L . n B 2 93 HIS 93 90 90 HIS HIS L . n B 2 94 LEU 94 91 91 LEU LEU L . n B 2 95 GLY 95 92 92 GLY GLY L . n B 2 96 THR 96 93 93 THR THR L . n B 2 97 SER 97 94 94 SER SER L . n B 2 98 PRO 98 95 95 PRO PRO L . n B 2 99 PRO 99 95 95 PRO PRO L A n B 2 100 TYR 100 96 96 TYR TYR L . n B 2 101 THR 101 97 97 THR THR L . n B 2 102 PHE 102 98 98 PHE PHE L . n B 2 103 GLY 103 99 99 GLY GLY L . n B 2 104 GLN 104 100 100 GLN GLN L . n B 2 105 GLY 105 101 101 GLY GLY L . n B 2 106 THR 106 102 102 THR THR L . n B 2 107 LYS 107 103 103 LYS LYS L . n B 2 108 LEU 108 104 104 LEU LEU L . n B 2 109 GLU 109 105 105 GLU GLU L . n B 2 110 ILE 110 106 106 ILE ILE L . n B 2 111 LYS 111 107 107 LYS LYS L . n B 2 112 ARG 112 108 108 ARG ARG L . n B 2 113 THR 113 109 109 THR THR L . n B 2 114 VAL 114 110 110 VAL VAL L . n B 2 115 ALA 115 111 111 ALA ALA L . n B 2 116 ALA 116 112 112 ALA ALA L . n B 2 117 PRO 117 113 113 PRO PRO L . n B 2 118 SER 118 114 114 SER SER L . n B 2 119 VAL 119 115 115 VAL VAL L . n B 2 120 PHE 120 116 116 PHE PHE L . n B 2 121 ILE 121 117 117 ILE ILE L . n B 2 122 PHE 122 118 118 PHE PHE L . n B 2 123 PRO 123 119 119 PRO PRO L . n B 2 124 PRO 124 120 120 PRO PRO L . n B 2 125 SER 125 121 121 SER SER L . n B 2 126 ASP 126 122 122 ASP ASP L . n B 2 127 GLU 127 123 123 GLU GLU L . n B 2 128 GLN 128 124 124 GLN GLN L . n B 2 129 LEU 129 125 125 LEU LEU L . n B 2 130 LYS 130 126 126 LYS LYS L . n B 2 131 SER 131 127 127 SER SER L . n B 2 132 GLY 132 128 128 GLY GLY L . n B 2 133 THR 133 129 129 THR THR L . n B 2 134 ALA 134 130 130 ALA ALA L . n B 2 135 SER 135 131 131 SER SER L . n B 2 136 VAL 136 132 132 VAL VAL L . n B 2 137 VAL 137 133 133 VAL VAL L . n B 2 138 CYS 138 134 134 CYS CYS L . n B 2 139 LEU 139 135 135 LEU LEU L . n B 2 140 LEU 140 136 136 LEU LEU L . n B 2 141 ASN 141 137 137 ASN ASN L . n B 2 142 ASN 142 138 138 ASN ASN L . n B 2 143 PHE 143 139 139 PHE PHE L . n B 2 144 TYR 144 140 140 TYR TYR L . n B 2 145 PRO 145 141 141 PRO PRO L . n B 2 146 ARG 146 142 142 ARG ARG L . n B 2 147 GLU 147 143 143 GLU GLU L . n B 2 148 ALA 148 144 144 ALA ALA L . n B 2 149 LYS 149 145 145 LYS LYS L . n B 2 150 VAL 150 146 146 VAL VAL L . n B 2 151 GLN 151 147 147 GLN GLN L . n B 2 152 TRP 152 148 148 TRP TRP L . n B 2 153 LYS 153 149 149 LYS LYS L . n B 2 154 VAL 154 150 150 VAL VAL L . n B 2 155 ASP 155 151 151 ASP ASP L . n B 2 156 ASN 156 152 152 ASN ASN L . n B 2 157 ALA 157 153 153 ALA ALA L . n B 2 158 LEU 158 154 154 LEU LEU L . n B 2 159 GLN 159 155 155 GLN GLN L . n B 2 160 SER 160 156 156 SER SER L . n B 2 161 GLY 161 157 157 GLY GLY L . n B 2 162 ASN 162 158 158 ASN ASN L . n B 2 163 SER 163 159 159 SER SER L . n B 2 164 GLN 164 160 160 GLN GLN L . n B 2 165 GLU 165 161 161 GLU GLU L . n B 2 166 SER 166 162 162 SER SER L . n B 2 167 VAL 167 163 163 VAL VAL L . n B 2 168 THR 168 164 164 THR THR L . n B 2 169 GLU 169 165 165 GLU GLU L . n B 2 170 GLN 170 166 166 GLN GLN L . n B 2 171 ASP 171 167 167 ASP ASP L . n B 2 172 SER 172 168 168 SER SER L . n B 2 173 LYS 173 169 169 LYS LYS L . n B 2 174 ASP 174 170 170 ASP ASP L . n B 2 175 SER 175 171 171 SER SER L . n B 2 176 THR 176 172 172 THR THR L . n B 2 177 TYR 177 173 173 TYR TYR L . n B 2 178 SER 178 174 174 SER SER L . n B 2 179 LEU 179 175 175 LEU LEU L . n B 2 180 SER 180 176 176 SER SER L . n B 2 181 SER 181 177 177 SER SER L . n B 2 182 THR 182 178 178 THR THR L . n B 2 183 LEU 183 179 179 LEU LEU L . n B 2 184 THR 184 180 180 THR THR L . n B 2 185 LEU 185 181 181 LEU LEU L . n B 2 186 SER 186 182 182 SER SER L . n B 2 187 LYS 187 183 183 LYS LYS L . n B 2 188 ALA 188 184 184 ALA ALA L . n B 2 189 ASP 189 185 185 ASP ASP L . n B 2 190 TYR 190 186 186 TYR TYR L . n B 2 191 GLU 191 187 187 GLU GLU L . n B 2 192 LYS 192 188 188 LYS LYS L . n B 2 193 HIS 193 189 189 HIS HIS L . n B 2 194 LYS 194 190 190 LYS LYS L . n B 2 195 VAL 195 191 191 VAL VAL L . n B 2 196 TYR 196 192 192 TYR TYR L . n B 2 197 ALA 197 193 193 ALA ALA L . n B 2 198 CYS 198 194 194 CYS CYS L . n B 2 199 GLU 199 195 195 GLU GLU L . n B 2 200 VAL 200 196 196 VAL VAL L . n B 2 201 THR 201 197 197 THR THR L . n B 2 202 HIS 202 198 198 HIS HIS L . n B 2 203 GLN 203 199 199 GLN GLN L . n B 2 204 GLY 204 200 200 GLY GLY L . n B 2 205 LEU 205 201 201 LEU LEU L . n B 2 206 SER 206 202 202 SER SER L . n B 2 207 SER 207 203 203 SER SER L . n B 2 208 PRO 208 204 204 PRO PRO L . n B 2 209 VAL 209 205 205 VAL VAL L . n B 2 210 THR 210 206 206 THR THR L . n B 2 211 LYS 211 207 207 LYS LYS L . n B 2 212 SER 212 208 208 SER SER L . n B 2 213 PHE 213 209 209 PHE PHE L . n B 2 214 ASN 214 210 210 ASN ASN L . n B 2 215 ARG 215 211 211 ARG ARG L . n B 2 216 GLY 216 212 212 GLY GLY L . n B 2 217 GLU 217 213 213 GLU GLU L . n B 2 218 CYS 218 214 ? ? ? L . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email wilson@scripps.edu _pdbx_contact_author.name_first Ian _pdbx_contact_author.name_last Wilson _pdbx_contact_author.name_mi A. _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-6469-2419 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL 1 301 1 GOL GOL L . D 4 HOH 1 301 4 HOH HOH H . D 4 HOH 2 302 3 HOH HOH H . D 4 HOH 3 303 1 HOH HOH H . D 4 HOH 4 304 2 HOH HOH H . E 4 HOH 1 401 8 HOH HOH L . E 4 HOH 2 402 6 HOH HOH L . E 4 HOH 3 403 5 HOH HOH L . E 4 HOH 4 404 7 HOH HOH L . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3930 ? 1 MORE -26 ? 1 'SSA (A^2)' 20120 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-06-07 2 'Structure model' 1 1 2023-07-12 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 x+1/2,-y+1/2,-z 3 -x,y+1/2,-z+1/2 4 -x+1/2,-y,z+1/2 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -29.725 -26.467 14.412 0.388662799053 0.32977442022 0.603013313786 -0.0765004056357 -0.0569816586493 0.000578223322797 4.40282170448 2.21606880258 4.26677742291 -2.13014295219 1.64737615258 -3.59081728354 0.202158973745 -0.0305802899155 -0.155774070782 0.0355073146388 -0.239375171468 0.178586361734 -0.817153602643 0.328308472985 -0.124501057202 'X-RAY DIFFRACTION' 2 ? refined -25.476 -39.954 22.351 0.585689152643 0.347477617827 0.633384259876 -0.0395129814881 0.0125488176053 0.0282022272143 3.54798246435 2.11800800702 3.864825808 -1.68081175293 -0.128366310114 -1.67174882517 -0.119207248453 0.11669630842 -0.0689306926083 -0.321745830411 -0.615860226378 -0.243428381713 -0.595308170584 0.992845722049 0.0538951921424 'X-RAY DIFFRACTION' 3 ? refined -29.867 -27.902 25.856 0.248414734868 0.337164932085 0.479970510097 -0.00527911148288 -0.0395895852252 -0.03591538865 6.35414835008 6.53951042373 4.90421402708 -0.428631036144 -0.698654043785 -3.12615081557 0.119530118515 -0.0850813651988 -0.0258197970366 -0.497561167723 0.208859053022 1.06000965169 -0.0314969784623 0.232470496229 -0.314267883487 'X-RAY DIFFRACTION' 4 ? refined -17.661 -35.735 30.083 0.703422167097 0.416051183334 0.795483834869 0.0629515290695 -0.156442994301 0.00282818370209 5.08718750569 8.61161007685 3.42672322264 -2.70545733406 1.66321007332 -4.28197551042 -0.545834565756 0.124086863319 0.379439463812 -0.628687403509 -0.392637399302 -1.0232947259 1.35938472714 -0.150618349177 0.402896242015 'X-RAY DIFFRACTION' 5 ? refined -23.123 -12.780 10.058 0.445710111853 0.275961077079 0.363218519191 -0.0181141232481 -0.0495451280861 -0.0429714587286 0.912971062748 6.15529471654 3.39583673801 0.464325898195 -0.417723970796 -3.59989010898 -0.183532953893 0.197042860227 -0.0396040180184 0.154480692665 -0.10513135794 0.0703065895849 -0.494588639261 -0.103579155853 -0.0776455417868 'X-RAY DIFFRACTION' 6 ? refined -15.972 -3.175 1.306 0.719127593426 0.287878857588 0.488402772321 -0.0417509303514 -0.00398038874554 -0.00798721267917 5.59436430921 4.26918034318 2.08433972192 0.263960759039 -0.298081394613 -0.712393388361 0.0660928585053 -0.0256464648516 -0.050666298291 0.471405759363 -0.292788406821 -0.0762512876223 -1.25623743844 -0.0697938448762 -0.0490827844029 'X-RAY DIFFRACTION' 7 ? refined -19.253 1.195 -6.680 1.19336294022 0.477243834358 0.530932511524 -0.088791384578 -0.0363442499067 0.111255067109 8.51867548942 9.58597651428 3.45380857625 2.82230350345 0.286743198454 0.104762742378 -0.0633966690923 0.191493383876 -0.118161664189 1.05765806708 0.810416042444 -0.0268038480559 -1.81737872077 -0.317775926584 -0.52431140575 'X-RAY DIFFRACTION' 8 ? refined -7.735 -18.344 35.020 0.305358003033 0.429520463107 0.577718177955 0.0331717110605 -0.140892248836 0.00604851939218 2.84104748362 3.09271451659 8.07521499275 1.14731124641 -3.0166641616 -2.05190139936 -0.0180085612559 -0.10564017796 0.179477557638 -0.880908951081 0.00505058861198 -0.339695162909 0.203061283319 -0.300967715379 0.473527624684 'X-RAY DIFFRACTION' 9 ? refined -6.136 -26.827 28.087 0.276379336071 0.315018294993 0.476971912186 0.0226704115722 0.0114320650935 0.0102264976674 4.33329632072 3.55519954312 1.91753428463 -0.198365659193 0.412415658425 -0.232868790351 0.09724103102 0.00596762147005 -0.0856903222109 0.0306977894244 -0.402170489895 -0.448808068293 -0.206380280595 0.338574245882 0.469447870601 'X-RAY DIFFRACTION' 10 ? refined -9.626 -16.416 27.250 0.260156711392 0.265314706391 0.431991322916 0.0222029510301 0.0151207598062 -0.0689827274491 0.401538184846 5.43969291806 1.76028386555 -0.468239635029 0.985398805248 -1.63248082572 -0.0742074407045 -0.291881657703 0.0682881535876 -0.379310708994 -0.272093899416 -0.781519986731 0.0545187958055 -0.140881588647 0.367415970998 'X-RAY DIFFRACTION' 11 ? refined -15.233 7.137 13.523 0.319120335071 0.267322814734 0.331952904392 -0.0432264981638 0.0274256972056 0.00212032921066 7.52719984125 7.83450347946 2.68352974999 -2.1155978026 1.04800352474 -0.876633798635 0.0826580398882 0.0524500178963 -0.101044687724 -0.214873367336 -0.0151784563646 0.183042477751 -0.523324896926 -0.0903377488921 -0.122314812136 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 H 1 H 17 '( CHAIN H AND RESID 1:17 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 H 18 H 31 '( CHAIN H AND RESID 18:31 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 H 32 H 87 '( CHAIN H AND RESID 32:87 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 H 88 H 100 '( CHAIN H AND RESID 88:100 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 5 5 H 101 H 134 '( CHAIN H AND RESID 101:134 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 6 6 H 135 H 203 '( CHAIN H AND RESID 135:203 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 7 7 H 204 H 214 '( CHAIN H AND RESID 204:214 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 8 8 L -1 L 29 '( CHAIN L AND RESID -1:29 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 9 9 L 30 L 90 '( CHAIN L AND RESID 30:90 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 10 10 L 91 L 113 '( CHAIN L AND RESID 91:113 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 11 11 L 114 L 213 '( CHAIN L AND RESID 114:213 )' ? ? ? ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.19.2_4158 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? 2.5.7 4 # _pdbx_entry_details.entry_id 8GBY _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER H 15 ? ? 78.49 -5.68 2 1 ILE H 48 ? ? -102.67 -63.60 3 1 TYR H 100 J ? -103.57 59.08 4 1 ASP H 144 ? ? 60.62 68.84 5 1 LEU L 47 ? ? -97.80 -62.69 6 1 SER L 76 ? ? -69.22 -76.89 7 1 ALA L 84 ? ? -162.91 -161.70 8 1 ASN L 138 ? ? 51.64 73.58 9 1 GLU L 143 ? ? -58.93 104.78 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 H VAL 100 D A VAL 111 2 1 Y 1 H GLU 100 E A GLU 112 3 1 Y 1 H PRO 100 F A PRO 113 4 1 Y 1 H PRO 100 G A PRO 114 5 1 Y 1 H SER 128 ? A SER 147 6 1 Y 1 H LYS 129 ? A LYS 148 7 1 Y 1 H SER 130 ? A SER 149 8 1 Y 1 H THR 131 ? A THR 150 9 1 Y 1 H SER 132 ? A SER 151 10 1 Y 1 H GLY 133 ? A GLY 152 11 1 Y 1 H SER 215 ? A SER 234 12 1 Y 1 H CYS 216 ? A CYS 235 13 1 Y 1 H ASP 217 ? A ASP 236 14 1 Y 1 L CYS 214 ? B CYS 218 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' 'UM1 AI144462' 1 'Bill & Melinda Gates Foundation' 'United States' OPP119635 2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 GLYCEROL GOL 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4NPY _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _space_group.name_H-M_alt 'P 21 21 21' _space_group.name_Hall 'P 2ac 2ab' _space_group.IT_number 19 _space_group.crystal_system orthorhombic _space_group.id 1 #