data_8GDY # _entry.id 8GDY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8GDY pdb_00008gdy 10.2210/pdb8gdy/pdb WWPDB D_1000272808 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-01-24 2 'Structure model' 1 1 2024-03-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.pdbx_database_id_PubMed' 11 2 'Structure model' '_citation.title' 12 2 'Structure model' '_citation.year' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8GDY _pdbx_database_status.recvd_initial_deposition_date 2023-03-06 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email jfh21@columbia.edu _pdbx_contact_author.name_first John _pdbx_contact_author.name_last Hunt _pdbx_contact_author.name_mi F. _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-0034-5167 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Forouhar, F.' 1 ? 'Banayan, N.E.' 2 ? 'Loughlin, B.L.' 3 ? 'Singh, S.' 4 ? 'Wong, V.' 5 ? 'Hunt, H.S.' 6 ? 'Handelman, S.K.' 7 ? 'Price, N.' 8 ? 'Hunt, J.F.' 9 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Protein Sci.' _citation.journal_id_ASTM PRCIEI _citation.journal_id_CSD 0795 _citation.journal_id_ISSN 1469-896X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 33 _citation.language ? _citation.page_first e4898 _citation.page_last e4898 _citation.title 'Systematic enhancement of protein crystallization efficiency by bulk lysine-to-arginine (KR) substitution.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/pro.4898 _citation.pdbx_database_id_PubMed 38358135 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Banayan, N.E.' 1 0000-0001-9064-4923 primary 'Loughlin, B.J.' 2 ? primary 'Singh, S.' 3 ? primary 'Forouhar, F.' 4 ? primary 'Lu, G.' 5 ? primary 'Wong, K.H.' 6 ? primary 'Neky, M.' 7 ? primary 'Hunt, H.S.' 8 ? primary 'Bateman Jr., L.B.' 9 ? primary 'Tamez, A.' 10 ? primary 'Handelman, S.K.' 11 ? primary 'Price, W.N.' 12 ? primary 'Hunt, J.F.' 13 0000-0003-0034-5167 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein disulfide-isomerase' 15831.599 2 5.3.4.1 'K31R, K42R, K57R, K65R, K69R, K71R, K114R, K130R, K131R' ? ? 2 non-polymer syn 'THIOCYANATE ION' 58.082 2 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 4 water nat water 18.015 142 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PDI,Cellular thyroid hormone-binding protein,Prolyl 4-hydroxylase subunit beta,p55' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSSHHHHHHSSGLVPRGSHMDAPEEEDHVLVLRRSNFAEALAAHRYLLVEFYAPWCGHCRALAPEYARAAGRLRAEGSE IRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTASPREYTAGREADDIVNWLRRRTGPAA ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLVPRGSHMDAPEEEDHVLVLRRSNFAEALAAHRYLLVEFYAPWCGHCRALAPEYARAAGRLRAEGSE IRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTASPREYTAGREADDIVNWLRRRTGPAA ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'THIOCYANATE ION' SCN 3 1,2-ETHANEDIOL EDO 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MET n 1 22 ASP n 1 23 ALA n 1 24 PRO n 1 25 GLU n 1 26 GLU n 1 27 GLU n 1 28 ASP n 1 29 HIS n 1 30 VAL n 1 31 LEU n 1 32 VAL n 1 33 LEU n 1 34 ARG n 1 35 ARG n 1 36 SER n 1 37 ASN n 1 38 PHE n 1 39 ALA n 1 40 GLU n 1 41 ALA n 1 42 LEU n 1 43 ALA n 1 44 ALA n 1 45 HIS n 1 46 ARG n 1 47 TYR n 1 48 LEU n 1 49 LEU n 1 50 VAL n 1 51 GLU n 1 52 PHE n 1 53 TYR n 1 54 ALA n 1 55 PRO n 1 56 TRP n 1 57 CYS n 1 58 GLY n 1 59 HIS n 1 60 CYS n 1 61 ARG n 1 62 ALA n 1 63 LEU n 1 64 ALA n 1 65 PRO n 1 66 GLU n 1 67 TYR n 1 68 ALA n 1 69 ARG n 1 70 ALA n 1 71 ALA n 1 72 GLY n 1 73 ARG n 1 74 LEU n 1 75 ARG n 1 76 ALA n 1 77 GLU n 1 78 GLY n 1 79 SER n 1 80 GLU n 1 81 ILE n 1 82 ARG n 1 83 LEU n 1 84 ALA n 1 85 LYS n 1 86 VAL n 1 87 ASP n 1 88 ALA n 1 89 THR n 1 90 GLU n 1 91 GLU n 1 92 SER n 1 93 ASP n 1 94 LEU n 1 95 ALA n 1 96 GLN n 1 97 GLN n 1 98 TYR n 1 99 GLY n 1 100 VAL n 1 101 ARG n 1 102 GLY n 1 103 TYR n 1 104 PRO n 1 105 THR n 1 106 ILE n 1 107 LYS n 1 108 PHE n 1 109 PHE n 1 110 ARG n 1 111 ASN n 1 112 GLY n 1 113 ASP n 1 114 THR n 1 115 ALA n 1 116 SER n 1 117 PRO n 1 118 ARG n 1 119 GLU n 1 120 TYR n 1 121 THR n 1 122 ALA n 1 123 GLY n 1 124 ARG n 1 125 GLU n 1 126 ALA n 1 127 ASP n 1 128 ASP n 1 129 ILE n 1 130 VAL n 1 131 ASN n 1 132 TRP n 1 133 LEU n 1 134 ARG n 1 135 ARG n 1 136 ARG n 1 137 THR n 1 138 GLY n 1 139 PRO n 1 140 ALA n 1 141 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 141 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'P4HB, ERBA2L, PDI, PDIA1, PO4DB' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SCN non-polymer . 'THIOCYANATE ION' ? 'C N S -1' 58.082 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -3 ? ? ? A . n A 1 2 GLY 2 -2 ? ? ? A . n A 1 3 SER 3 -1 ? ? ? A . n A 1 4 SER 4 0 ? ? ? A . n A 1 5 HIS 5 1 ? ? ? A . n A 1 6 HIS 6 2 ? ? ? A . n A 1 7 HIS 7 3 ? ? ? A . n A 1 8 HIS 8 4 ? ? ? A . n A 1 9 HIS 9 5 ? ? ? A . n A 1 10 HIS 10 6 ? ? ? A . n A 1 11 SER 11 7 ? ? ? A . n A 1 12 SER 12 8 ? ? ? A . n A 1 13 GLY 13 9 ? ? ? A . n A 1 14 LEU 14 10 ? ? ? A . n A 1 15 VAL 15 11 ? ? ? A . n A 1 16 PRO 16 12 ? ? ? A . n A 1 17 ARG 17 13 ? ? ? A . n A 1 18 GLY 18 14 ? ? ? A . n A 1 19 SER 19 15 ? ? ? A . n A 1 20 HIS 20 16 ? ? ? A . n A 1 21 MET 21 17 ? ? ? A . n A 1 22 ASP 22 18 ? ? ? A . n A 1 23 ALA 23 19 ? ? ? A . n A 1 24 PRO 24 20 20 PRO PRO A . n A 1 25 GLU 25 21 21 GLU GLU A . n A 1 26 GLU 26 22 22 GLU GLU A . n A 1 27 GLU 27 23 23 GLU GLU A . n A 1 28 ASP 28 24 24 ASP ASP A . n A 1 29 HIS 29 25 25 HIS HIS A . n A 1 30 VAL 30 26 26 VAL VAL A . n A 1 31 LEU 31 27 27 LEU LEU A . n A 1 32 VAL 32 28 28 VAL VAL A . n A 1 33 LEU 33 29 29 LEU LEU A . n A 1 34 ARG 34 30 30 ARG ARG A . n A 1 35 ARG 35 31 31 ARG ARG A . n A 1 36 SER 36 32 32 SER SER A . n A 1 37 ASN 37 33 33 ASN ASN A . n A 1 38 PHE 38 34 34 PHE PHE A . n A 1 39 ALA 39 35 35 ALA ALA A . n A 1 40 GLU 40 36 36 GLU GLU A . n A 1 41 ALA 41 37 37 ALA ALA A . n A 1 42 LEU 42 38 38 LEU LEU A . n A 1 43 ALA 43 39 39 ALA ALA A . n A 1 44 ALA 44 40 40 ALA ALA A . n A 1 45 HIS 45 41 41 HIS HIS A . n A 1 46 ARG 46 42 42 ARG ARG A . n A 1 47 TYR 47 43 43 TYR TYR A . n A 1 48 LEU 48 44 44 LEU LEU A . n A 1 49 LEU 49 45 45 LEU LEU A . n A 1 50 VAL 50 46 46 VAL VAL A . n A 1 51 GLU 51 47 47 GLU GLU A . n A 1 52 PHE 52 48 48 PHE PHE A . n A 1 53 TYR 53 49 49 TYR TYR A . n A 1 54 ALA 54 50 50 ALA ALA A . n A 1 55 PRO 55 51 51 PRO PRO A . n A 1 56 TRP 56 52 52 TRP TRP A . n A 1 57 CYS 57 53 53 CYS CYS A . n A 1 58 GLY 58 54 54 GLY GLY A . n A 1 59 HIS 59 55 55 HIS HIS A . n A 1 60 CYS 60 56 56 CYS CYS A . n A 1 61 ARG 61 57 57 ARG ARG A . n A 1 62 ALA 62 58 58 ALA ALA A . n A 1 63 LEU 63 59 59 LEU LEU A . n A 1 64 ALA 64 60 60 ALA ALA A . n A 1 65 PRO 65 61 61 PRO PRO A . n A 1 66 GLU 66 62 62 GLU GLU A . n A 1 67 TYR 67 63 63 TYR TYR A . n A 1 68 ALA 68 64 64 ALA ALA A . n A 1 69 ARG 69 65 65 ARG ARG A . n A 1 70 ALA 70 66 66 ALA ALA A . n A 1 71 ALA 71 67 67 ALA ALA A . n A 1 72 GLY 72 68 68 GLY GLY A . n A 1 73 ARG 73 69 69 ARG ARG A . n A 1 74 LEU 74 70 70 LEU LEU A . n A 1 75 ARG 75 71 71 ARG ARG A . n A 1 76 ALA 76 72 72 ALA ALA A . n A 1 77 GLU 77 73 73 GLU GLU A . n A 1 78 GLY 78 74 74 GLY GLY A . n A 1 79 SER 79 75 75 SER SER A . n A 1 80 GLU 80 76 76 GLU GLU A . n A 1 81 ILE 81 77 77 ILE ILE A . n A 1 82 ARG 82 78 78 ARG ARG A . n A 1 83 LEU 83 79 79 LEU LEU A . n A 1 84 ALA 84 80 80 ALA ALA A . n A 1 85 LYS 85 81 81 LYS LYS A . n A 1 86 VAL 86 82 82 VAL VAL A . n A 1 87 ASP 87 83 83 ASP ASP A . n A 1 88 ALA 88 84 84 ALA ALA A . n A 1 89 THR 89 85 85 THR THR A . n A 1 90 GLU 90 86 86 GLU GLU A . n A 1 91 GLU 91 87 87 GLU GLU A . n A 1 92 SER 92 88 88 SER SER A . n A 1 93 ASP 93 89 89 ASP ASP A . n A 1 94 LEU 94 90 90 LEU LEU A . n A 1 95 ALA 95 91 91 ALA ALA A . n A 1 96 GLN 96 92 92 GLN GLN A . n A 1 97 GLN 97 93 93 GLN GLN A . n A 1 98 TYR 98 94 94 TYR TYR A . n A 1 99 GLY 99 95 95 GLY GLY A . n A 1 100 VAL 100 96 96 VAL VAL A . n A 1 101 ARG 101 97 97 ARG ARG A . n A 1 102 GLY 102 98 98 GLY GLY A . n A 1 103 TYR 103 99 99 TYR TYR A . n A 1 104 PRO 104 100 100 PRO PRO A . n A 1 105 THR 105 101 101 THR THR A . n A 1 106 ILE 106 102 102 ILE ILE A . n A 1 107 LYS 107 103 103 LYS LYS A . n A 1 108 PHE 108 104 104 PHE PHE A . n A 1 109 PHE 109 105 105 PHE PHE A . n A 1 110 ARG 110 106 106 ARG ARG A . n A 1 111 ASN 111 107 107 ASN ASN A . n A 1 112 GLY 112 108 108 GLY GLY A . n A 1 113 ASP 113 109 109 ASP ASP A . n A 1 114 THR 114 110 110 THR THR A . n A 1 115 ALA 115 111 111 ALA ALA A . n A 1 116 SER 116 112 112 SER SER A . n A 1 117 PRO 117 113 113 PRO PRO A . n A 1 118 ARG 118 114 114 ARG ARG A . n A 1 119 GLU 119 115 115 GLU GLU A . n A 1 120 TYR 120 116 116 TYR TYR A . n A 1 121 THR 121 117 117 THR THR A . n A 1 122 ALA 122 118 118 ALA ALA A . n A 1 123 GLY 123 119 119 GLY GLY A . n A 1 124 ARG 124 120 120 ARG ARG A . n A 1 125 GLU 125 121 121 GLU GLU A . n A 1 126 ALA 126 122 122 ALA ALA A . n A 1 127 ASP 127 123 123 ASP ASP A . n A 1 128 ASP 128 124 124 ASP ASP A . n A 1 129 ILE 129 125 125 ILE ILE A . n A 1 130 VAL 130 126 126 VAL VAL A . n A 1 131 ASN 131 127 127 ASN ASN A . n A 1 132 TRP 132 128 128 TRP TRP A . n A 1 133 LEU 133 129 129 LEU LEU A . n A 1 134 ARG 134 130 130 ARG ARG A . n A 1 135 ARG 135 131 131 ARG ARG A . n A 1 136 ARG 136 132 132 ARG ARG A . n A 1 137 THR 137 133 133 THR THR A . n A 1 138 GLY 138 134 134 GLY GLY A . n A 1 139 PRO 139 135 135 PRO PRO A . n A 1 140 ALA 140 136 136 ALA ALA A . n A 1 141 ALA 141 137 137 ALA ALA A . n B 1 1 MET 1 -3 ? ? ? B . n B 1 2 GLY 2 -2 ? ? ? B . n B 1 3 SER 3 -1 ? ? ? B . n B 1 4 SER 4 0 ? ? ? B . n B 1 5 HIS 5 1 ? ? ? B . n B 1 6 HIS 6 2 ? ? ? B . n B 1 7 HIS 7 3 ? ? ? B . n B 1 8 HIS 8 4 ? ? ? B . n B 1 9 HIS 9 5 ? ? ? B . n B 1 10 HIS 10 6 ? ? ? B . n B 1 11 SER 11 7 ? ? ? B . n B 1 12 SER 12 8 ? ? ? B . n B 1 13 GLY 13 9 ? ? ? B . n B 1 14 LEU 14 10 ? ? ? B . n B 1 15 VAL 15 11 ? ? ? B . n B 1 16 PRO 16 12 ? ? ? B . n B 1 17 ARG 17 13 ? ? ? B . n B 1 18 GLY 18 14 ? ? ? B . n B 1 19 SER 19 15 ? ? ? B . n B 1 20 HIS 20 16 ? ? ? B . n B 1 21 MET 21 17 ? ? ? B . n B 1 22 ASP 22 18 18 ASP ASP B . n B 1 23 ALA 23 19 19 ALA ALA B . n B 1 24 PRO 24 20 20 PRO PRO B . n B 1 25 GLU 25 21 21 GLU GLU B . n B 1 26 GLU 26 22 22 GLU GLU B . n B 1 27 GLU 27 23 23 GLU GLU B . n B 1 28 ASP 28 24 24 ASP ASP B . n B 1 29 HIS 29 25 25 HIS HIS B . n B 1 30 VAL 30 26 26 VAL VAL B . n B 1 31 LEU 31 27 27 LEU LEU B . n B 1 32 VAL 32 28 28 VAL VAL B . n B 1 33 LEU 33 29 29 LEU LEU B . n B 1 34 ARG 34 30 30 ARG ARG B . n B 1 35 ARG 35 31 31 ARG ARG B . n B 1 36 SER 36 32 32 SER SER B . n B 1 37 ASN 37 33 33 ASN ASN B . n B 1 38 PHE 38 34 34 PHE PHE B . n B 1 39 ALA 39 35 35 ALA ALA B . n B 1 40 GLU 40 36 36 GLU GLU B . n B 1 41 ALA 41 37 37 ALA ALA B . n B 1 42 LEU 42 38 38 LEU LEU B . n B 1 43 ALA 43 39 39 ALA ALA B . n B 1 44 ALA 44 40 40 ALA ALA B . n B 1 45 HIS 45 41 41 HIS HIS B . n B 1 46 ARG 46 42 42 ARG ARG B . n B 1 47 TYR 47 43 43 TYR TYR B . n B 1 48 LEU 48 44 44 LEU LEU B . n B 1 49 LEU 49 45 45 LEU LEU B . n B 1 50 VAL 50 46 46 VAL VAL B . n B 1 51 GLU 51 47 47 GLU GLU B . n B 1 52 PHE 52 48 48 PHE PHE B . n B 1 53 TYR 53 49 49 TYR TYR B . n B 1 54 ALA 54 50 50 ALA ALA B . n B 1 55 PRO 55 51 51 PRO PRO B . n B 1 56 TRP 56 52 52 TRP TRP B . n B 1 57 CYS 57 53 53 CYS CYS B . n B 1 58 GLY 58 54 54 GLY GLY B . n B 1 59 HIS 59 55 55 HIS HIS B . n B 1 60 CYS 60 56 56 CYS CYS B . n B 1 61 ARG 61 57 57 ARG ARG B . n B 1 62 ALA 62 58 58 ALA ALA B . n B 1 63 LEU 63 59 59 LEU LEU B . n B 1 64 ALA 64 60 60 ALA ALA B . n B 1 65 PRO 65 61 61 PRO PRO B . n B 1 66 GLU 66 62 62 GLU GLU B . n B 1 67 TYR 67 63 63 TYR TYR B . n B 1 68 ALA 68 64 64 ALA ALA B . n B 1 69 ARG 69 65 65 ARG ARG B . n B 1 70 ALA 70 66 66 ALA ALA B . n B 1 71 ALA 71 67 67 ALA ALA B . n B 1 72 GLY 72 68 68 GLY GLY B . n B 1 73 ARG 73 69 69 ARG ARG B . n B 1 74 LEU 74 70 70 LEU LEU B . n B 1 75 ARG 75 71 71 ARG ARG B . n B 1 76 ALA 76 72 72 ALA ALA B . n B 1 77 GLU 77 73 73 GLU GLU B . n B 1 78 GLY 78 74 74 GLY GLY B . n B 1 79 SER 79 75 75 SER SER B . n B 1 80 GLU 80 76 76 GLU GLU B . n B 1 81 ILE 81 77 77 ILE ILE B . n B 1 82 ARG 82 78 78 ARG ARG B . n B 1 83 LEU 83 79 79 LEU LEU B . n B 1 84 ALA 84 80 80 ALA ALA B . n B 1 85 LYS 85 81 81 LYS LYS B . n B 1 86 VAL 86 82 82 VAL VAL B . n B 1 87 ASP 87 83 83 ASP ASP B . n B 1 88 ALA 88 84 84 ALA ALA B . n B 1 89 THR 89 85 85 THR THR B . n B 1 90 GLU 90 86 86 GLU GLU B . n B 1 91 GLU 91 87 87 GLU GLU B . n B 1 92 SER 92 88 88 SER SER B . n B 1 93 ASP 93 89 89 ASP ASP B . n B 1 94 LEU 94 90 90 LEU LEU B . n B 1 95 ALA 95 91 91 ALA ALA B . n B 1 96 GLN 96 92 92 GLN GLN B . n B 1 97 GLN 97 93 93 GLN GLN B . n B 1 98 TYR 98 94 94 TYR TYR B . n B 1 99 GLY 99 95 95 GLY GLY B . n B 1 100 VAL 100 96 96 VAL VAL B . n B 1 101 ARG 101 97 97 ARG ARG B . n B 1 102 GLY 102 98 98 GLY GLY B . n B 1 103 TYR 103 99 99 TYR TYR B . n B 1 104 PRO 104 100 100 PRO PRO B . n B 1 105 THR 105 101 101 THR THR B . n B 1 106 ILE 106 102 102 ILE ILE B . n B 1 107 LYS 107 103 103 LYS LYS B . n B 1 108 PHE 108 104 104 PHE PHE B . n B 1 109 PHE 109 105 105 PHE PHE B . n B 1 110 ARG 110 106 106 ARG ARG B . n B 1 111 ASN 111 107 107 ASN ASN B . n B 1 112 GLY 112 108 108 GLY GLY B . n B 1 113 ASP 113 109 109 ASP ASP B . n B 1 114 THR 114 110 110 THR THR B . n B 1 115 ALA 115 111 111 ALA ALA B . n B 1 116 SER 116 112 112 SER SER B . n B 1 117 PRO 117 113 113 PRO PRO B . n B 1 118 ARG 118 114 114 ARG ARG B . n B 1 119 GLU 119 115 115 GLU GLU B . n B 1 120 TYR 120 116 116 TYR TYR B . n B 1 121 THR 121 117 117 THR THR B . n B 1 122 ALA 122 118 118 ALA ALA B . n B 1 123 GLY 123 119 119 GLY GLY B . n B 1 124 ARG 124 120 120 ARG ARG B . n B 1 125 GLU 125 121 121 GLU GLU B . n B 1 126 ALA 126 122 122 ALA ALA B . n B 1 127 ASP 127 123 123 ASP ASP B . n B 1 128 ASP 128 124 124 ASP ASP B . n B 1 129 ILE 129 125 125 ILE ILE B . n B 1 130 VAL 130 126 126 VAL VAL B . n B 1 131 ASN 131 127 127 ASN ASN B . n B 1 132 TRP 132 128 128 TRP TRP B . n B 1 133 LEU 133 129 129 LEU LEU B . n B 1 134 ARG 134 130 130 ARG ARG B . n B 1 135 ARG 135 131 131 ARG ARG B . n B 1 136 ARG 136 132 132 ARG ARG B . n B 1 137 THR 137 133 133 THR THR B . n B 1 138 GLY 138 134 134 GLY GLY B . n B 1 139 PRO 139 135 135 PRO PRO B . n B 1 140 ALA 140 136 136 ALA ALA B . n B 1 141 ALA 141 137 137 ALA ALA B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SCN 1 201 201 SCN SCN A . D 3 EDO 1 202 202 EDO EDO A . E 2 SCN 1 201 201 SCN SCN B . F 4 HOH 1 301 102 HOH HOH A . F 4 HOH 2 302 12 HOH HOH A . F 4 HOH 3 303 109 HOH HOH A . F 4 HOH 4 304 97 HOH HOH A . F 4 HOH 5 305 21 HOH HOH A . F 4 HOH 6 306 61 HOH HOH A . F 4 HOH 7 307 19 HOH HOH A . F 4 HOH 8 308 42 HOH HOH A . F 4 HOH 9 309 34 HOH HOH A . F 4 HOH 10 310 24 HOH HOH A . F 4 HOH 11 311 32 HOH HOH A . F 4 HOH 12 312 20 HOH HOH A . F 4 HOH 13 313 9 HOH HOH A . F 4 HOH 14 314 17 HOH HOH A . F 4 HOH 15 315 26 HOH HOH A . F 4 HOH 16 316 62 HOH HOH A . F 4 HOH 17 317 50 HOH HOH A . F 4 HOH 18 318 1 HOH HOH A . F 4 HOH 19 319 122 HOH HOH A . F 4 HOH 20 320 98 HOH HOH A . F 4 HOH 21 321 27 HOH HOH A . F 4 HOH 22 322 33 HOH HOH A . F 4 HOH 23 323 23 HOH HOH A . F 4 HOH 24 324 31 HOH HOH A . F 4 HOH 25 325 41 HOH HOH A . F 4 HOH 26 326 92 HOH HOH A . F 4 HOH 27 327 74 HOH HOH A . F 4 HOH 28 328 16 HOH HOH A . F 4 HOH 29 329 14 HOH HOH A . F 4 HOH 30 330 29 HOH HOH A . F 4 HOH 31 331 111 HOH HOH A . F 4 HOH 32 332 5 HOH HOH A . F 4 HOH 33 333 22 HOH HOH A . F 4 HOH 34 334 7 HOH HOH A . F 4 HOH 35 335 43 HOH HOH A . F 4 HOH 36 336 108 HOH HOH A . F 4 HOH 37 337 49 HOH HOH A . F 4 HOH 38 338 95 HOH HOH A . F 4 HOH 39 339 105 HOH HOH A . F 4 HOH 40 340 89 HOH HOH A . F 4 HOH 41 341 135 HOH HOH A . F 4 HOH 42 342 44 HOH HOH A . F 4 HOH 43 343 53 HOH HOH A . F 4 HOH 44 344 8 HOH HOH A . F 4 HOH 45 345 68 HOH HOH A . F 4 HOH 46 346 128 HOH HOH A . F 4 HOH 47 347 106 HOH HOH A . F 4 HOH 48 348 136 HOH HOH A . F 4 HOH 49 349 123 HOH HOH A . F 4 HOH 50 350 59 HOH HOH A . F 4 HOH 51 351 54 HOH HOH A . F 4 HOH 52 352 66 HOH HOH A . F 4 HOH 53 353 80 HOH HOH A . F 4 HOH 54 354 88 HOH HOH A . F 4 HOH 55 355 76 HOH HOH A . F 4 HOH 56 356 101 HOH HOH A . F 4 HOH 57 357 73 HOH HOH A . F 4 HOH 58 358 129 HOH HOH A . F 4 HOH 59 359 110 HOH HOH A . F 4 HOH 60 360 65 HOH HOH A . F 4 HOH 61 361 81 HOH HOH A . F 4 HOH 62 362 78 HOH HOH A . F 4 HOH 63 363 137 HOH HOH A . F 4 HOH 64 364 79 HOH HOH A . F 4 HOH 65 365 82 HOH HOH A . F 4 HOH 66 366 60 HOH HOH A . F 4 HOH 67 367 119 HOH HOH A . F 4 HOH 68 368 116 HOH HOH A . F 4 HOH 69 369 87 HOH HOH A . F 4 HOH 70 370 126 HOH HOH A . F 4 HOH 71 371 134 HOH HOH A . F 4 HOH 72 372 130 HOH HOH A . F 4 HOH 73 373 132 HOH HOH A . F 4 HOH 74 374 138 HOH HOH A . F 4 HOH 75 375 143 HOH HOH A . F 4 HOH 76 376 112 HOH HOH A . F 4 HOH 77 377 85 HOH HOH A . G 4 HOH 1 301 91 HOH HOH B . G 4 HOH 2 302 115 HOH HOH B . G 4 HOH 3 303 77 HOH HOH B . G 4 HOH 4 304 114 HOH HOH B . G 4 HOH 5 305 94 HOH HOH B . G 4 HOH 6 306 107 HOH HOH B . G 4 HOH 7 307 70 HOH HOH B . G 4 HOH 8 308 63 HOH HOH B . G 4 HOH 9 309 6 HOH HOH B . G 4 HOH 10 310 45 HOH HOH B . G 4 HOH 11 311 28 HOH HOH B . G 4 HOH 12 312 11 HOH HOH B . G 4 HOH 13 313 2 HOH HOH B . G 4 HOH 14 314 71 HOH HOH B . G 4 HOH 15 315 55 HOH HOH B . G 4 HOH 16 316 120 HOH HOH B . G 4 HOH 17 317 58 HOH HOH B . G 4 HOH 18 318 10 HOH HOH B . G 4 HOH 19 319 52 HOH HOH B . G 4 HOH 20 320 40 HOH HOH B . G 4 HOH 21 321 75 HOH HOH B . G 4 HOH 22 322 38 HOH HOH B . G 4 HOH 23 323 51 HOH HOH B . G 4 HOH 24 324 13 HOH HOH B . G 4 HOH 25 325 25 HOH HOH B . G 4 HOH 26 326 64 HOH HOH B . G 4 HOH 27 327 90 HOH HOH B . G 4 HOH 28 328 36 HOH HOH B . G 4 HOH 29 329 46 HOH HOH B . G 4 HOH 30 330 3 HOH HOH B . G 4 HOH 31 331 30 HOH HOH B . G 4 HOH 32 332 127 HOH HOH B . G 4 HOH 33 333 39 HOH HOH B . G 4 HOH 34 334 47 HOH HOH B . G 4 HOH 35 335 15 HOH HOH B . G 4 HOH 36 336 96 HOH HOH B . G 4 HOH 37 337 124 HOH HOH B . G 4 HOH 38 338 100 HOH HOH B . G 4 HOH 39 339 69 HOH HOH B . G 4 HOH 40 340 139 HOH HOH B . G 4 HOH 41 341 84 HOH HOH B . G 4 HOH 42 342 4 HOH HOH B . G 4 HOH 43 343 37 HOH HOH B . G 4 HOH 44 344 99 HOH HOH B . G 4 HOH 45 345 142 HOH HOH B . G 4 HOH 46 346 67 HOH HOH B . G 4 HOH 47 347 57 HOH HOH B . G 4 HOH 48 348 86 HOH HOH B . G 4 HOH 49 349 133 HOH HOH B . G 4 HOH 50 350 103 HOH HOH B . G 4 HOH 51 351 35 HOH HOH B . G 4 HOH 52 352 117 HOH HOH B . G 4 HOH 53 353 56 HOH HOH B . G 4 HOH 54 354 18 HOH HOH B . G 4 HOH 55 355 118 HOH HOH B . G 4 HOH 56 356 93 HOH HOH B . G 4 HOH 57 357 48 HOH HOH B . G 4 HOH 58 358 72 HOH HOH B . G 4 HOH 59 359 131 HOH HOH B . G 4 HOH 60 360 141 HOH HOH B . G 4 HOH 61 361 83 HOH HOH B . G 4 HOH 62 362 104 HOH HOH B . G 4 HOH 63 363 140 HOH HOH B . G 4 HOH 64 364 113 HOH HOH B . G 4 HOH 65 365 125 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.17 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8GDY _cell.details ? _cell.formula_units_Z ? _cell.length_a 58.706 _cell.length_a_esd ? _cell.length_b 61.303 _cell.length_b_esd ? _cell.length_c 68.561 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8GDY _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8GDY _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.95 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 36.98 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method MICROBATCH _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M potassium thiocyanate, 0.1 M MES, and 24% (w/v) PEG 20k' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 277 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-06-13 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-E _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 8GDY _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.89 _reflns.d_resolution_low 68.56 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 20332 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 12.8 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 7.0 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.993 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.238 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.89 _reflns_shell.d_res_low 1.93 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1062 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 10.4 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.457 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 82.2 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 2.148 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8GDY _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.05 _refine.ls_d_res_low 45.70 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 16013 _refine.ls_number_reflns_R_free 1574 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.59 _refine.ls_percent_reflns_R_free 9.83 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1972 _refine.ls_R_factor_R_free 0.2391 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1924 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.37 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 32.13 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.24 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.05 _refine_hist.d_res_low 45.70 _refine_hist.number_atoms_solvent 142 _refine_hist.number_atoms_total 2049 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1897 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.006 ? 1948 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.795 ? 2635 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 35.811 ? 721 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.054 ? 270 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 ? 356 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.05 2.12 . . 142 1286 100.00 . . . . 0.2834 . . . . . . . . . . . 0.3736 'X-RAY DIFFRACTION' 2.12 2.19 . . 124 1324 100.00 . . . . 0.2503 . . . . . . . . . . . 0.2700 'X-RAY DIFFRACTION' 2.19 2.28 . . 148 1267 99.00 . . . . 0.2340 . . . . . . . . . . . 0.2916 'X-RAY DIFFRACTION' 2.28 2.38 . . 148 1280 100.00 . . . . 0.2035 . . . . . . . . . . . 0.3007 'X-RAY DIFFRACTION' 2.38 2.51 . . 152 1281 100.00 . . . . 0.1894 . . . . . . . . . . . 0.2626 'X-RAY DIFFRACTION' 2.51 2.67 . . 142 1320 99.00 . . . . 0.2054 . . . . . . . . . . . 0.3040 'X-RAY DIFFRACTION' 2.67 2.87 . . 149 1279 99.00 . . . . 0.2075 . . . . . . . . . . . 0.2364 'X-RAY DIFFRACTION' 2.87 3.16 . . 110 1340 99.00 . . . . 0.1930 . . . . . . . . . . . 0.2749 'X-RAY DIFFRACTION' 3.16 3.62 . . 157 1307 100.00 . . . . 0.1873 . . . . . . . . . . . 0.2671 'X-RAY DIFFRACTION' 3.62 4.56 . . 160 1336 100.00 . . . . 0.1575 . . . . . . . . . . . 0.1776 'X-RAY DIFFRACTION' 4.56 45.70 . . 142 1419 99.00 . . . . 0.1773 . . . . . . . . . . . 0.1886 # _struct.entry_id 8GDY _struct.title 'Crystal structure of the human PDI first domain with 9 mutations' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8GDY _struct_keywords.text 'PDI, ISOMERASE' _struct_keywords.pdbx_keywords ISOMERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 4 ? G N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PDIA1_HUMAN _struct_ref.pdbx_db_accession P07237 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DAPEEEDHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVR GYPTIKFFRNGDTASPKEYTAGREADDIVNWLKKRTGPAA ; _struct_ref.pdbx_align_begin 18 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8GDY A 22 ? 141 ? P07237 18 ? 137 ? 18 137 2 1 8GDY B 22 ? 141 ? P07237 18 ? 137 ? 18 137 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8GDY MET A 1 ? UNP P07237 ? ? 'initiating methionine' -3 1 1 8GDY GLY A 2 ? UNP P07237 ? ? 'expression tag' -2 2 1 8GDY SER A 3 ? UNP P07237 ? ? 'expression tag' -1 3 1 8GDY SER A 4 ? UNP P07237 ? ? 'expression tag' 0 4 1 8GDY HIS A 5 ? UNP P07237 ? ? 'expression tag' 1 5 1 8GDY HIS A 6 ? UNP P07237 ? ? 'expression tag' 2 6 1 8GDY HIS A 7 ? UNP P07237 ? ? 'expression tag' 3 7 1 8GDY HIS A 8 ? UNP P07237 ? ? 'expression tag' 4 8 1 8GDY HIS A 9 ? UNP P07237 ? ? 'expression tag' 5 9 1 8GDY HIS A 10 ? UNP P07237 ? ? 'expression tag' 6 10 1 8GDY SER A 11 ? UNP P07237 ? ? 'expression tag' 7 11 1 8GDY SER A 12 ? UNP P07237 ? ? 'expression tag' 8 12 1 8GDY GLY A 13 ? UNP P07237 ? ? 'expression tag' 9 13 1 8GDY LEU A 14 ? UNP P07237 ? ? 'expression tag' 10 14 1 8GDY VAL A 15 ? UNP P07237 ? ? 'expression tag' 11 15 1 8GDY PRO A 16 ? UNP P07237 ? ? 'expression tag' 12 16 1 8GDY ARG A 17 ? UNP P07237 ? ? 'expression tag' 13 17 1 8GDY GLY A 18 ? UNP P07237 ? ? 'expression tag' 14 18 1 8GDY SER A 19 ? UNP P07237 ? ? 'expression tag' 15 19 1 8GDY HIS A 20 ? UNP P07237 ? ? 'expression tag' 16 20 1 8GDY MET A 21 ? UNP P07237 ? ? 'expression tag' 17 21 1 8GDY ARG A 35 ? UNP P07237 LYS 31 'engineered mutation' 31 22 1 8GDY ARG A 46 ? UNP P07237 LYS 42 'engineered mutation' 42 23 1 8GDY ARG A 61 ? UNP P07237 LYS 57 'engineered mutation' 57 24 1 8GDY ARG A 69 ? UNP P07237 LYS 65 'engineered mutation' 65 25 1 8GDY ARG A 73 ? UNP P07237 LYS 69 'engineered mutation' 69 26 1 8GDY ARG A 75 ? UNP P07237 LYS 71 'engineered mutation' 71 27 1 8GDY ARG A 118 ? UNP P07237 LYS 114 'engineered mutation' 114 28 1 8GDY ARG A 134 ? UNP P07237 LYS 130 'engineered mutation' 130 29 1 8GDY ARG A 135 ? UNP P07237 LYS 131 'engineered mutation' 131 30 2 8GDY MET B 1 ? UNP P07237 ? ? 'initiating methionine' -3 31 2 8GDY GLY B 2 ? UNP P07237 ? ? 'expression tag' -2 32 2 8GDY SER B 3 ? UNP P07237 ? ? 'expression tag' -1 33 2 8GDY SER B 4 ? UNP P07237 ? ? 'expression tag' 0 34 2 8GDY HIS B 5 ? UNP P07237 ? ? 'expression tag' 1 35 2 8GDY HIS B 6 ? UNP P07237 ? ? 'expression tag' 2 36 2 8GDY HIS B 7 ? UNP P07237 ? ? 'expression tag' 3 37 2 8GDY HIS B 8 ? UNP P07237 ? ? 'expression tag' 4 38 2 8GDY HIS B 9 ? UNP P07237 ? ? 'expression tag' 5 39 2 8GDY HIS B 10 ? UNP P07237 ? ? 'expression tag' 6 40 2 8GDY SER B 11 ? UNP P07237 ? ? 'expression tag' 7 41 2 8GDY SER B 12 ? UNP P07237 ? ? 'expression tag' 8 42 2 8GDY GLY B 13 ? UNP P07237 ? ? 'expression tag' 9 43 2 8GDY LEU B 14 ? UNP P07237 ? ? 'expression tag' 10 44 2 8GDY VAL B 15 ? UNP P07237 ? ? 'expression tag' 11 45 2 8GDY PRO B 16 ? UNP P07237 ? ? 'expression tag' 12 46 2 8GDY ARG B 17 ? UNP P07237 ? ? 'expression tag' 13 47 2 8GDY GLY B 18 ? UNP P07237 ? ? 'expression tag' 14 48 2 8GDY SER B 19 ? UNP P07237 ? ? 'expression tag' 15 49 2 8GDY HIS B 20 ? UNP P07237 ? ? 'expression tag' 16 50 2 8GDY MET B 21 ? UNP P07237 ? ? 'expression tag' 17 51 2 8GDY ARG B 35 ? UNP P07237 LYS 31 'engineered mutation' 31 52 2 8GDY ARG B 46 ? UNP P07237 LYS 42 'engineered mutation' 42 53 2 8GDY ARG B 61 ? UNP P07237 LYS 57 'engineered mutation' 57 54 2 8GDY ARG B 69 ? UNP P07237 LYS 65 'engineered mutation' 65 55 2 8GDY ARG B 73 ? UNP P07237 LYS 69 'engineered mutation' 69 56 2 8GDY ARG B 75 ? UNP P07237 LYS 71 'engineered mutation' 71 57 2 8GDY ARG B 118 ? UNP P07237 LYS 114 'engineered mutation' 114 58 2 8GDY ARG B 134 ? UNP P07237 LYS 130 'engineered mutation' 130 59 2 8GDY ARG B 135 ? UNP P07237 LYS 131 'engineered mutation' 131 60 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,F 2 1 B,E,G # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details 'crystal structure' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ARG A 34 ? HIS A 45 ? ARG A 30 HIS A 41 1 ? 12 HELX_P HELX_P2 AA2 CYS A 57 ? GLU A 77 ? CYS A 53 GLU A 73 1 ? 21 HELX_P HELX_P3 AA3 GLU A 91 ? TYR A 98 ? GLU A 87 TYR A 94 1 ? 8 HELX_P HELX_P4 AA4 GLU A 125 ? GLY A 138 ? GLU A 121 GLY A 134 1 ? 14 HELX_P HELX_P5 AA5 ARG B 34 ? HIS B 45 ? ARG B 30 HIS B 41 1 ? 12 HELX_P HELX_P6 AA6 CYS B 57 ? GLU B 77 ? CYS B 53 GLU B 73 1 ? 21 HELX_P HELX_P7 AA7 GLU B 91 ? TYR B 98 ? GLU B 87 TYR B 94 1 ? 8 HELX_P HELX_P8 AA8 GLU B 125 ? THR B 137 ? GLU B 121 THR B 133 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 103 A . ? TYR 99 A PRO 104 A ? PRO 100 A 1 -9.48 2 TYR 103 B . ? TYR 99 B PRO 104 B ? PRO 100 B 1 -8.73 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? parallel AA2 3 4 ? parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLU A 26 ? GLU A 27 ? GLU A 22 GLU A 23 AA1 2 VAL A 30 ? VAL A 32 ? VAL A 26 VAL A 28 AA1 3 ARG A 82 ? ASP A 87 ? ARG A 78 ASP A 83 AA1 4 TYR A 47 ? TYR A 53 ? TYR A 43 TYR A 49 AA1 5 THR A 105 ? ARG A 110 ? THR A 101 ARG A 106 AA1 6 ARG A 118 ? GLU A 119 ? ARG A 114 GLU A 115 AA2 1 GLU B 26 ? GLU B 27 ? GLU B 22 GLU B 23 AA2 2 VAL B 30 ? VAL B 32 ? VAL B 26 VAL B 28 AA2 3 ARG B 82 ? ASP B 87 ? ARG B 78 ASP B 83 AA2 4 TYR B 47 ? TYR B 53 ? TYR B 43 TYR B 49 AA2 5 THR B 105 ? ARG B 110 ? THR B 101 ARG B 106 AA2 6 ARG B 118 ? GLU B 119 ? ARG B 114 GLU B 115 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLU A 27 ? N GLU A 23 O VAL A 30 ? O VAL A 26 AA1 2 3 N LEU A 31 ? N LEU A 27 O LEU A 83 ? O LEU A 79 AA1 3 4 O ALA A 84 ? O ALA A 80 N LEU A 49 ? N LEU A 45 AA1 4 5 N PHE A 52 ? N PHE A 48 O THR A 105 ? O THR A 101 AA1 5 6 N PHE A 108 ? N PHE A 104 O ARG A 118 ? O ARG A 114 AA2 1 2 N GLU B 27 ? N GLU B 23 O VAL B 30 ? O VAL B 26 AA2 2 3 N LEU B 31 ? N LEU B 27 O LEU B 83 ? O LEU B 79 AA2 3 4 O ALA B 84 ? O ALA B 80 N LEU B 49 ? N LEU B 45 AA2 4 5 N PHE B 52 ? N PHE B 48 O THR B 105 ? O THR B 101 AA2 5 6 N PHE B 108 ? N PHE B 104 O ARG B 118 ? O ARG B 114 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 87 ? ? -110.00 64.74 2 1 THR A 133 ? ? -124.37 -60.92 3 1 GLU B 87 ? ? -106.77 65.18 4 1 VAL B 96 ? ? -57.15 109.78 5 1 THR B 133 ? ? -122.31 -71.49 # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -15.3877 _pdbx_refine_tls.origin_y -15.1971 _pdbx_refine_tls.origin_z 16.9988 _pdbx_refine_tls.T[1][1] 0.1822 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] 0.0010 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] -0.0015 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.1799 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] -0.0073 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.1886 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 0.1996 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] -0.1214 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] 0.0652 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 0.3139 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] -0.2265 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 0.1826 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] -0.0399 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] -0.0012 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] 0.0149 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] -0.0044 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] -0.0148 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] -0.0043 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] -0.0417 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] -0.0322 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] -0.0000 _pdbx_refine_tls.S[3][3]_esd ? # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_PDB_ins_code ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_PDB_ins_code ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # _pdbx_entry_details.entry_id 8GDY _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -3 ? A MET 1 2 1 Y 1 A GLY -2 ? A GLY 2 3 1 Y 1 A SER -1 ? A SER 3 4 1 Y 1 A SER 0 ? A SER 4 5 1 Y 1 A HIS 1 ? A HIS 5 6 1 Y 1 A HIS 2 ? A HIS 6 7 1 Y 1 A HIS 3 ? A HIS 7 8 1 Y 1 A HIS 4 ? A HIS 8 9 1 Y 1 A HIS 5 ? A HIS 9 10 1 Y 1 A HIS 6 ? A HIS 10 11 1 Y 1 A SER 7 ? A SER 11 12 1 Y 1 A SER 8 ? A SER 12 13 1 Y 1 A GLY 9 ? A GLY 13 14 1 Y 1 A LEU 10 ? A LEU 14 15 1 Y 1 A VAL 11 ? A VAL 15 16 1 Y 1 A PRO 12 ? A PRO 16 17 1 Y 1 A ARG 13 ? A ARG 17 18 1 Y 1 A GLY 14 ? A GLY 18 19 1 Y 1 A SER 15 ? A SER 19 20 1 Y 1 A HIS 16 ? A HIS 20 21 1 Y 1 A MET 17 ? A MET 21 22 1 Y 1 A ASP 18 ? A ASP 22 23 1 Y 1 A ALA 19 ? A ALA 23 24 1 Y 1 B MET -3 ? B MET 1 25 1 Y 1 B GLY -2 ? B GLY 2 26 1 Y 1 B SER -1 ? B SER 3 27 1 Y 1 B SER 0 ? B SER 4 28 1 Y 1 B HIS 1 ? B HIS 5 29 1 Y 1 B HIS 2 ? B HIS 6 30 1 Y 1 B HIS 3 ? B HIS 7 31 1 Y 1 B HIS 4 ? B HIS 8 32 1 Y 1 B HIS 5 ? B HIS 9 33 1 Y 1 B HIS 6 ? B HIS 10 34 1 Y 1 B SER 7 ? B SER 11 35 1 Y 1 B SER 8 ? B SER 12 36 1 Y 1 B GLY 9 ? B GLY 13 37 1 Y 1 B LEU 10 ? B LEU 14 38 1 Y 1 B VAL 11 ? B VAL 15 39 1 Y 1 B PRO 12 ? B PRO 16 40 1 Y 1 B ARG 13 ? B ARG 17 41 1 Y 1 B GLY 14 ? B GLY 18 42 1 Y 1 B SER 15 ? B SER 19 43 1 Y 1 B HIS 16 ? B HIS 20 44 1 Y 1 B MET 17 ? B MET 21 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EDO C1 C N N 88 EDO O1 O N N 89 EDO C2 C N N 90 EDO O2 O N N 91 EDO H11 H N N 92 EDO H12 H N N 93 EDO HO1 H N N 94 EDO H21 H N N 95 EDO H22 H N N 96 EDO HO2 H N N 97 GLN N N N N 98 GLN CA C N S 99 GLN C C N N 100 GLN O O N N 101 GLN CB C N N 102 GLN CG C N N 103 GLN CD C N N 104 GLN OE1 O N N 105 GLN NE2 N N N 106 GLN OXT O N N 107 GLN H H N N 108 GLN H2 H N N 109 GLN HA H N N 110 GLN HB2 H N N 111 GLN HB3 H N N 112 GLN HG2 H N N 113 GLN HG3 H N N 114 GLN HE21 H N N 115 GLN HE22 H N N 116 GLN HXT H N N 117 GLU N N N N 118 GLU CA C N S 119 GLU C C N N 120 GLU O O N N 121 GLU CB C N N 122 GLU CG C N N 123 GLU CD C N N 124 GLU OE1 O N N 125 GLU OE2 O N N 126 GLU OXT O N N 127 GLU H H N N 128 GLU H2 H N N 129 GLU HA H N N 130 GLU HB2 H N N 131 GLU HB3 H N N 132 GLU HG2 H N N 133 GLU HG3 H N N 134 GLU HE2 H N N 135 GLU HXT H N N 136 GLY N N N N 137 GLY CA C N N 138 GLY C C N N 139 GLY O O N N 140 GLY OXT O N N 141 GLY H H N N 142 GLY H2 H N N 143 GLY HA2 H N N 144 GLY HA3 H N N 145 GLY HXT H N N 146 HIS N N N N 147 HIS CA C N S 148 HIS C C N N 149 HIS O O N N 150 HIS CB C N N 151 HIS CG C Y N 152 HIS ND1 N Y N 153 HIS CD2 C Y N 154 HIS CE1 C Y N 155 HIS NE2 N Y N 156 HIS OXT O N N 157 HIS H H N N 158 HIS H2 H N N 159 HIS HA H N N 160 HIS HB2 H N N 161 HIS HB3 H N N 162 HIS HD1 H N N 163 HIS HD2 H N N 164 HIS HE1 H N N 165 HIS HE2 H N N 166 HIS HXT H N N 167 HOH O O N N 168 HOH H1 H N N 169 HOH H2 H N N 170 ILE N N N N 171 ILE CA C N S 172 ILE C C N N 173 ILE O O N N 174 ILE CB C N S 175 ILE CG1 C N N 176 ILE CG2 C N N 177 ILE CD1 C N N 178 ILE OXT O N N 179 ILE H H N N 180 ILE H2 H N N 181 ILE HA H N N 182 ILE HB H N N 183 ILE HG12 H N N 184 ILE HG13 H N N 185 ILE HG21 H N N 186 ILE HG22 H N N 187 ILE HG23 H N N 188 ILE HD11 H N N 189 ILE HD12 H N N 190 ILE HD13 H N N 191 ILE HXT H N N 192 LEU N N N N 193 LEU CA C N S 194 LEU C C N N 195 LEU O O N N 196 LEU CB C N N 197 LEU CG C N N 198 LEU CD1 C N N 199 LEU CD2 C N N 200 LEU OXT O N N 201 LEU H H N N 202 LEU H2 H N N 203 LEU HA H N N 204 LEU HB2 H N N 205 LEU HB3 H N N 206 LEU HG H N N 207 LEU HD11 H N N 208 LEU HD12 H N N 209 LEU HD13 H N N 210 LEU HD21 H N N 211 LEU HD22 H N N 212 LEU HD23 H N N 213 LEU HXT H N N 214 LYS N N N N 215 LYS CA C N S 216 LYS C C N N 217 LYS O O N N 218 LYS CB C N N 219 LYS CG C N N 220 LYS CD C N N 221 LYS CE C N N 222 LYS NZ N N N 223 LYS OXT O N N 224 LYS H H N N 225 LYS H2 H N N 226 LYS HA H N N 227 LYS HB2 H N N 228 LYS HB3 H N N 229 LYS HG2 H N N 230 LYS HG3 H N N 231 LYS HD2 H N N 232 LYS HD3 H N N 233 LYS HE2 H N N 234 LYS HE3 H N N 235 LYS HZ1 H N N 236 LYS HZ2 H N N 237 LYS HZ3 H N N 238 LYS HXT H N N 239 MET N N N N 240 MET CA C N S 241 MET C C N N 242 MET O O N N 243 MET CB C N N 244 MET CG C N N 245 MET SD S N N 246 MET CE C N N 247 MET OXT O N N 248 MET H H N N 249 MET H2 H N N 250 MET HA H N N 251 MET HB2 H N N 252 MET HB3 H N N 253 MET HG2 H N N 254 MET HG3 H N N 255 MET HE1 H N N 256 MET HE2 H N N 257 MET HE3 H N N 258 MET HXT H N N 259 PHE N N N N 260 PHE CA C N S 261 PHE C C N N 262 PHE O O N N 263 PHE CB C N N 264 PHE CG C Y N 265 PHE CD1 C Y N 266 PHE CD2 C Y N 267 PHE CE1 C Y N 268 PHE CE2 C Y N 269 PHE CZ C Y N 270 PHE OXT O N N 271 PHE H H N N 272 PHE H2 H N N 273 PHE HA H N N 274 PHE HB2 H N N 275 PHE HB3 H N N 276 PHE HD1 H N N 277 PHE HD2 H N N 278 PHE HE1 H N N 279 PHE HE2 H N N 280 PHE HZ H N N 281 PHE HXT H N N 282 PRO N N N N 283 PRO CA C N S 284 PRO C C N N 285 PRO O O N N 286 PRO CB C N N 287 PRO CG C N N 288 PRO CD C N N 289 PRO OXT O N N 290 PRO H H N N 291 PRO HA H N N 292 PRO HB2 H N N 293 PRO HB3 H N N 294 PRO HG2 H N N 295 PRO HG3 H N N 296 PRO HD2 H N N 297 PRO HD3 H N N 298 PRO HXT H N N 299 SCN S S N N 300 SCN C C N N 301 SCN N N N N 302 SER N N N N 303 SER CA C N S 304 SER C C N N 305 SER O O N N 306 SER CB C N N 307 SER OG O N N 308 SER OXT O N N 309 SER H H N N 310 SER H2 H N N 311 SER HA H N N 312 SER HB2 H N N 313 SER HB3 H N N 314 SER HG H N N 315 SER HXT H N N 316 THR N N N N 317 THR CA C N S 318 THR C C N N 319 THR O O N N 320 THR CB C N R 321 THR OG1 O N N 322 THR CG2 C N N 323 THR OXT O N N 324 THR H H N N 325 THR H2 H N N 326 THR HA H N N 327 THR HB H N N 328 THR HG1 H N N 329 THR HG21 H N N 330 THR HG22 H N N 331 THR HG23 H N N 332 THR HXT H N N 333 TRP N N N N 334 TRP CA C N S 335 TRP C C N N 336 TRP O O N N 337 TRP CB C N N 338 TRP CG C Y N 339 TRP CD1 C Y N 340 TRP CD2 C Y N 341 TRP NE1 N Y N 342 TRP CE2 C Y N 343 TRP CE3 C Y N 344 TRP CZ2 C Y N 345 TRP CZ3 C Y N 346 TRP CH2 C Y N 347 TRP OXT O N N 348 TRP H H N N 349 TRP H2 H N N 350 TRP HA H N N 351 TRP HB2 H N N 352 TRP HB3 H N N 353 TRP HD1 H N N 354 TRP HE1 H N N 355 TRP HE3 H N N 356 TRP HZ2 H N N 357 TRP HZ3 H N N 358 TRP HH2 H N N 359 TRP HXT H N N 360 TYR N N N N 361 TYR CA C N S 362 TYR C C N N 363 TYR O O N N 364 TYR CB C N N 365 TYR CG C Y N 366 TYR CD1 C Y N 367 TYR CD2 C Y N 368 TYR CE1 C Y N 369 TYR CE2 C Y N 370 TYR CZ C Y N 371 TYR OH O N N 372 TYR OXT O N N 373 TYR H H N N 374 TYR H2 H N N 375 TYR HA H N N 376 TYR HB2 H N N 377 TYR HB3 H N N 378 TYR HD1 H N N 379 TYR HD2 H N N 380 TYR HE1 H N N 381 TYR HE2 H N N 382 TYR HH H N N 383 TYR HXT H N N 384 VAL N N N N 385 VAL CA C N S 386 VAL C C N N 387 VAL O O N N 388 VAL CB C N N 389 VAL CG1 C N N 390 VAL CG2 C N N 391 VAL OXT O N N 392 VAL H H N N 393 VAL H2 H N N 394 VAL HA H N N 395 VAL HB H N N 396 VAL HG11 H N N 397 VAL HG12 H N N 398 VAL HG13 H N N 399 VAL HG21 H N N 400 VAL HG22 H N N 401 VAL HG23 H N N 402 VAL HXT H N N 403 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 HIS N CA sing N N 138 HIS N H sing N N 139 HIS N H2 sing N N 140 HIS CA C sing N N 141 HIS CA CB sing N N 142 HIS CA HA sing N N 143 HIS C O doub N N 144 HIS C OXT sing N N 145 HIS CB CG sing N N 146 HIS CB HB2 sing N N 147 HIS CB HB3 sing N N 148 HIS CG ND1 sing Y N 149 HIS CG CD2 doub Y N 150 HIS ND1 CE1 doub Y N 151 HIS ND1 HD1 sing N N 152 HIS CD2 NE2 sing Y N 153 HIS CD2 HD2 sing N N 154 HIS CE1 NE2 sing Y N 155 HIS CE1 HE1 sing N N 156 HIS NE2 HE2 sing N N 157 HIS OXT HXT sing N N 158 HOH O H1 sing N N 159 HOH O H2 sing N N 160 ILE N CA sing N N 161 ILE N H sing N N 162 ILE N H2 sing N N 163 ILE CA C sing N N 164 ILE CA CB sing N N 165 ILE CA HA sing N N 166 ILE C O doub N N 167 ILE C OXT sing N N 168 ILE CB CG1 sing N N 169 ILE CB CG2 sing N N 170 ILE CB HB sing N N 171 ILE CG1 CD1 sing N N 172 ILE CG1 HG12 sing N N 173 ILE CG1 HG13 sing N N 174 ILE CG2 HG21 sing N N 175 ILE CG2 HG22 sing N N 176 ILE CG2 HG23 sing N N 177 ILE CD1 HD11 sing N N 178 ILE CD1 HD12 sing N N 179 ILE CD1 HD13 sing N N 180 ILE OXT HXT sing N N 181 LEU N CA sing N N 182 LEU N H sing N N 183 LEU N H2 sing N N 184 LEU CA C sing N N 185 LEU CA CB sing N N 186 LEU CA HA sing N N 187 LEU C O doub N N 188 LEU C OXT sing N N 189 LEU CB CG sing N N 190 LEU CB HB2 sing N N 191 LEU CB HB3 sing N N 192 LEU CG CD1 sing N N 193 LEU CG CD2 sing N N 194 LEU CG HG sing N N 195 LEU CD1 HD11 sing N N 196 LEU CD1 HD12 sing N N 197 LEU CD1 HD13 sing N N 198 LEU CD2 HD21 sing N N 199 LEU CD2 HD22 sing N N 200 LEU CD2 HD23 sing N N 201 LEU OXT HXT sing N N 202 LYS N CA sing N N 203 LYS N H sing N N 204 LYS N H2 sing N N 205 LYS CA C sing N N 206 LYS CA CB sing N N 207 LYS CA HA sing N N 208 LYS C O doub N N 209 LYS C OXT sing N N 210 LYS CB CG sing N N 211 LYS CB HB2 sing N N 212 LYS CB HB3 sing N N 213 LYS CG CD sing N N 214 LYS CG HG2 sing N N 215 LYS CG HG3 sing N N 216 LYS CD CE sing N N 217 LYS CD HD2 sing N N 218 LYS CD HD3 sing N N 219 LYS CE NZ sing N N 220 LYS CE HE2 sing N N 221 LYS CE HE3 sing N N 222 LYS NZ HZ1 sing N N 223 LYS NZ HZ2 sing N N 224 LYS NZ HZ3 sing N N 225 LYS OXT HXT sing N N 226 MET N CA sing N N 227 MET N H sing N N 228 MET N H2 sing N N 229 MET CA C sing N N 230 MET CA CB sing N N 231 MET CA HA sing N N 232 MET C O doub N N 233 MET C OXT sing N N 234 MET CB CG sing N N 235 MET CB HB2 sing N N 236 MET CB HB3 sing N N 237 MET CG SD sing N N 238 MET CG HG2 sing N N 239 MET CG HG3 sing N N 240 MET SD CE sing N N 241 MET CE HE1 sing N N 242 MET CE HE2 sing N N 243 MET CE HE3 sing N N 244 MET OXT HXT sing N N 245 PHE N CA sing N N 246 PHE N H sing N N 247 PHE N H2 sing N N 248 PHE CA C sing N N 249 PHE CA CB sing N N 250 PHE CA HA sing N N 251 PHE C O doub N N 252 PHE C OXT sing N N 253 PHE CB CG sing N N 254 PHE CB HB2 sing N N 255 PHE CB HB3 sing N N 256 PHE CG CD1 doub Y N 257 PHE CG CD2 sing Y N 258 PHE CD1 CE1 sing Y N 259 PHE CD1 HD1 sing N N 260 PHE CD2 CE2 doub Y N 261 PHE CD2 HD2 sing N N 262 PHE CE1 CZ doub Y N 263 PHE CE1 HE1 sing N N 264 PHE CE2 CZ sing Y N 265 PHE CE2 HE2 sing N N 266 PHE CZ HZ sing N N 267 PHE OXT HXT sing N N 268 PRO N CA sing N N 269 PRO N CD sing N N 270 PRO N H sing N N 271 PRO CA C sing N N 272 PRO CA CB sing N N 273 PRO CA HA sing N N 274 PRO C O doub N N 275 PRO C OXT sing N N 276 PRO CB CG sing N N 277 PRO CB HB2 sing N N 278 PRO CB HB3 sing N N 279 PRO CG CD sing N N 280 PRO CG HG2 sing N N 281 PRO CG HG3 sing N N 282 PRO CD HD2 sing N N 283 PRO CD HD3 sing N N 284 PRO OXT HXT sing N N 285 SCN S C sing N N 286 SCN C N trip N N 287 SER N CA sing N N 288 SER N H sing N N 289 SER N H2 sing N N 290 SER CA C sing N N 291 SER CA CB sing N N 292 SER CA HA sing N N 293 SER C O doub N N 294 SER C OXT sing N N 295 SER CB OG sing N N 296 SER CB HB2 sing N N 297 SER CB HB3 sing N N 298 SER OG HG sing N N 299 SER OXT HXT sing N N 300 THR N CA sing N N 301 THR N H sing N N 302 THR N H2 sing N N 303 THR CA C sing N N 304 THR CA CB sing N N 305 THR CA HA sing N N 306 THR C O doub N N 307 THR C OXT sing N N 308 THR CB OG1 sing N N 309 THR CB CG2 sing N N 310 THR CB HB sing N N 311 THR OG1 HG1 sing N N 312 THR CG2 HG21 sing N N 313 THR CG2 HG22 sing N N 314 THR CG2 HG23 sing N N 315 THR OXT HXT sing N N 316 TRP N CA sing N N 317 TRP N H sing N N 318 TRP N H2 sing N N 319 TRP CA C sing N N 320 TRP CA CB sing N N 321 TRP CA HA sing N N 322 TRP C O doub N N 323 TRP C OXT sing N N 324 TRP CB CG sing N N 325 TRP CB HB2 sing N N 326 TRP CB HB3 sing N N 327 TRP CG CD1 doub Y N 328 TRP CG CD2 sing Y N 329 TRP CD1 NE1 sing Y N 330 TRP CD1 HD1 sing N N 331 TRP CD2 CE2 doub Y N 332 TRP CD2 CE3 sing Y N 333 TRP NE1 CE2 sing Y N 334 TRP NE1 HE1 sing N N 335 TRP CE2 CZ2 sing Y N 336 TRP CE3 CZ3 doub Y N 337 TRP CE3 HE3 sing N N 338 TRP CZ2 CH2 doub Y N 339 TRP CZ2 HZ2 sing N N 340 TRP CZ3 CH2 sing Y N 341 TRP CZ3 HZ3 sing N N 342 TRP CH2 HH2 sing N N 343 TRP OXT HXT sing N N 344 TYR N CA sing N N 345 TYR N H sing N N 346 TYR N H2 sing N N 347 TYR CA C sing N N 348 TYR CA CB sing N N 349 TYR CA HA sing N N 350 TYR C O doub N N 351 TYR C OXT sing N N 352 TYR CB CG sing N N 353 TYR CB HB2 sing N N 354 TYR CB HB3 sing N N 355 TYR CG CD1 doub Y N 356 TYR CG CD2 sing Y N 357 TYR CD1 CE1 sing Y N 358 TYR CD1 HD1 sing N N 359 TYR CD2 CE2 doub Y N 360 TYR CD2 HD2 sing N N 361 TYR CE1 CZ doub Y N 362 TYR CE1 HE1 sing N N 363 TYR CE2 CZ sing Y N 364 TYR CE2 HE2 sing N N 365 TYR CZ OH sing N N 366 TYR OH HH sing N N 367 TYR OXT HXT sing N N 368 VAL N CA sing N N 369 VAL N H sing N N 370 VAL N H2 sing N N 371 VAL CA C sing N N 372 VAL CA CB sing N N 373 VAL CA HA sing N N 374 VAL C O doub N N 375 VAL C OXT sing N N 376 VAL CB CG1 sing N N 377 VAL CB CG2 sing N N 378 VAL CB HB sing N N 379 VAL CG1 HG11 sing N N 380 VAL CG1 HG12 sing N N 381 VAL CG1 HG13 sing N N 382 VAL CG2 HG21 sing N N 383 VAL CG2 HG22 sing N N 384 VAL CG2 HG23 sing N N 385 VAL OXT HXT sing N N 386 # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 EDO ? ? EDO ? ? 'SUBJECT OF INVESTIGATION' ? 2 SCN ? ? SCN ? ? 'SUBJECT OF INVESTIGATION' ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4EKZ _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 8GDY _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.017034 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016312 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014586 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_