HEADER DNA BINDING PROTEIN 15-MAR-23 8GJ8 TITLE RAD51C C-TERMINAL DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: RAD51C; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C-TERMINAL DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ALVINELLA POMPEJANA; SOURCE 3 ORGANISM_TAXID: 6376; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DNA-BINDING DNA DAMAGE DNA REPAIR ATP BINDING, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.S.ARVAI,J.A.TAINER,G.WILLIAMS REVDAT 1 16-AUG-23 8GJ8 0 JRNL AUTH M.A.LONGO,S.ROY,Y.CHEN,K.H.TOMASZOWSKI,A.S.ARVAI,J.T.PEPPER, JRNL AUTH 2 R.A.BOISVERT,S.KUNNIMALAIYAAN,C.KESHVANI,D.SCHILD,A.BACOLLA, JRNL AUTH 3 G.J.WILLIAMS,J.A.TAINER,K.SCHLACHER JRNL TITL RAD51C-XRCC3 STRUCTURE AND CANCER PATIENT MUTATIONS DEFINE JRNL TITL 2 DNA REPLICATION ROLES. JRNL REF NAT COMMUN V. 14 4445 2023 JRNL REFN ESSN 2041-1723 JRNL PMID 37488098 JRNL DOI 10.1038/S41467-023-40096-1 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.36 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 12763 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 641 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 922 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.38 REMARK 3 BIN R VALUE (WORKING SET) : 0.2710 REMARK 3 BIN FREE R VALUE SET COUNT : 47 REMARK 3 BIN FREE R VALUE : 0.3950 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2013 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 28 REMARK 3 SOLVENT ATOMS : 44 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.43000 REMARK 3 B22 (A**2) : -0.43000 REMARK 3 B33 (A**2) : 1.38000 REMARK 3 B12 (A**2) : -0.43000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.304 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.225 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.169 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.916 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2095 ; 0.016 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2025 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2851 ; 1.856 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4658 ; 0.876 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 259 ; 6.673 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 88 ;33.467 ;24.318 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 364 ;17.298 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;19.796 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 338 ; 0.109 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2322 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 475 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 74 A 85 REMARK 3 ORIGIN FOR THE GROUP (A): 61.0297 33.9278 22.2225 REMARK 3 T TENSOR REMARK 3 T11: 0.2982 T22: 0.2142 REMARK 3 T33: 0.1733 T12: 0.1130 REMARK 3 T13: -0.0818 T23: -0.0403 REMARK 3 L TENSOR REMARK 3 L11: 9.1824 L22: 17.9473 REMARK 3 L33: 4.7861 L12: 9.7869 REMARK 3 L13: -2.9937 L23: -8.5414 REMARK 3 S TENSOR REMARK 3 S11: -0.1733 S12: -0.4984 S13: 0.4831 REMARK 3 S21: 0.8800 S22: -0.0506 S23: -0.0208 REMARK 3 S31: -0.7131 S32: -0.1770 S33: 0.2239 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 86 A 178 REMARK 3 ORIGIN FOR THE GROUP (A): 52.4495 44.1464 0.8517 REMARK 3 T TENSOR REMARK 3 T11: 0.1582 T22: 0.2254 REMARK 3 T33: 0.0352 T12: -0.0285 REMARK 3 T13: 0.0090 T23: 0.0272 REMARK 3 L TENSOR REMARK 3 L11: 2.5814 L22: 3.9587 REMARK 3 L33: 3.0554 L12: -0.4260 REMARK 3 L13: -0.0416 L23: -0.2005 REMARK 3 S TENSOR REMARK 3 S11: -0.0422 S12: 0.3293 S13: -0.0420 REMARK 3 S21: -0.2005 S22: -0.0572 S23: -0.3215 REMARK 3 S31: 0.1988 S32: 0.2423 S33: 0.0994 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 179 A 240 REMARK 3 ORIGIN FOR THE GROUP (A): 44.8017 41.2916 9.0196 REMARK 3 T TENSOR REMARK 3 T11: 0.1526 T22: 0.2129 REMARK 3 T33: 0.0126 T12: -0.0379 REMARK 3 T13: 0.0067 T23: 0.0088 REMARK 3 L TENSOR REMARK 3 L11: 4.1837 L22: 5.7864 REMARK 3 L33: 3.8639 L12: -1.1191 REMARK 3 L13: 0.3847 L23: -0.5126 REMARK 3 S TENSOR REMARK 3 S11: -0.0571 S12: -0.0522 S13: -0.2070 REMARK 3 S21: 0.2571 S22: 0.0086 S23: 0.1071 REMARK 3 S31: 0.3099 S32: -0.1382 S33: 0.0485 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 241 A 276 REMARK 3 ORIGIN FOR THE GROUP (A): 43.8147 57.0754 16.8427 REMARK 3 T TENSOR REMARK 3 T11: 0.4484 T22: 0.4264 REMARK 3 T33: 0.2007 T12: 0.1257 REMARK 3 T13: -0.1074 T23: -0.0715 REMARK 3 L TENSOR REMARK 3 L11: 3.8696 L22: 7.7761 REMARK 3 L33: 5.8758 L12: -3.2352 REMARK 3 L13: 0.0033 L23: 3.8268 REMARK 3 S TENSOR REMARK 3 S11: -0.7096 S12: -0.6990 S13: 0.7423 REMARK 3 S21: 0.7464 S22: 0.5089 S23: -0.1618 REMARK 3 S31: -0.7307 S32: -0.5158 S33: 0.2006 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 277 A 302 REMARK 3 ORIGIN FOR THE GROUP (A): 47.7341 65.5357 5.5312 REMARK 3 T TENSOR REMARK 3 T11: 0.7054 T22: 0.5348 REMARK 3 T33: 0.6355 T12: 0.0980 REMARK 3 T13: 0.0487 T23: 0.0641 REMARK 3 L TENSOR REMARK 3 L11: 13.5894 L22: 5.5103 REMARK 3 L33: 0.1531 L12: -3.3731 REMARK 3 L13: -1.2565 L23: 0.7099 REMARK 3 S TENSOR REMARK 3 S11: 0.3062 S12: 0.3604 S13: 1.1215 REMARK 3 S21: -0.6548 S22: -0.2136 S23: 0.0790 REMARK 3 S31: -0.1026 S32: -0.0760 S33: -0.0926 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 303 A 326 REMARK 3 ORIGIN FOR THE GROUP (A): 54.6313 60.3940 -1.3446 REMARK 3 T TENSOR REMARK 3 T11: 0.1440 T22: 0.0902 REMARK 3 T33: 0.2192 T12: 0.0040 REMARK 3 T13: 0.0286 T23: 0.0468 REMARK 3 L TENSOR REMARK 3 L11: 5.2453 L22: 5.0779 REMARK 3 L33: 13.6198 L12: 0.8333 REMARK 3 L13: 2.3618 L23: -1.2170 REMARK 3 S TENSOR REMARK 3 S11: 0.0525 S12: 0.2776 S13: 0.3882 REMARK 3 S21: 0.0501 S22: -0.1122 S23: -0.2491 REMARK 3 S31: -0.7479 S32: 0.1510 S33: 0.0597 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 327 A 345 REMARK 3 ORIGIN FOR THE GROUP (A): 56.8384 53.9076 -6.7932 REMARK 3 T TENSOR REMARK 3 T11: 0.1914 T22: 0.2170 REMARK 3 T33: 0.0929 T12: 0.0337 REMARK 3 T13: 0.0345 T23: 0.0837 REMARK 3 L TENSOR REMARK 3 L11: 9.1135 L22: 15.2510 REMARK 3 L33: 2.6785 L12: 6.6764 REMARK 3 L13: -0.1796 L23: 2.7665 REMARK 3 S TENSOR REMARK 3 S11: 0.1121 S12: 0.4440 S13: 0.2021 REMARK 3 S21: -0.0905 S22: 0.0526 S23: -0.6748 REMARK 3 S31: -0.0560 S32: 0.3128 S33: -0.1647 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8GJ8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAR-23. REMARK 100 THE DEPOSITION ID IS D_1000273006. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.11587 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13402 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 36.360 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.02200 REMARK 200 FOR THE DATA SET : 15.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.32300 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: (25 MG/ML PROTEIN) CRYSTALLIZED IN 1:1 REMARK 280 PROTEIN:CRYSTALLIZATION REAGENT (0.1 M BIS-TRIS PH 5.5, 0.3 M NA REMARK 280 FORMATE), WITH BEST DIFFRACTION ACHIEVED AFTER ADDITIVE SCREEN REMARK 280 OPTIMIZATION WITH 4% 1,3-PROPANEDIOL AND 10 DAYS OF GROWTH., REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 288K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.12200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 18.56100 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 18.56100 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 37.12200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 519 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 537 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 70 REMARK 465 GLN A 71 REMARK 465 ASP A 72 REMARK 465 THR A 73 REMARK 465 ALA A 284 REMARK 465 SER A 285 REMARK 465 GLN A 286 REMARK 465 GLN A 287 REMARK 465 GLU A 288 REMARK 465 THR A 289 REMARK 465 SER A 290 REMARK 465 HIS A 291 REMARK 465 LEU A 292 REMARK 465 ILE A 293 REMARK 465 PRO A 294 REMARK 465 ALA A 295 REMARK 465 LEU A 296 REMARK 465 GLY A 297 REMARK 465 GLU A 298 REMARK 465 PRO A 346 REMARK 465 THR A 347 REMARK 465 SER A 348 REMARK 465 GLY A 349 REMARK 465 LEU A 350 REMARK 465 GLU A 351 REMARK 465 HIS A 352 REMARK 465 HIS A 353 REMARK 465 HIS A 354 REMARK 465 HIS A 355 REMARK 465 HIS A 356 REMARK 465 HIS A 357 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 252 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 88 -35.42 -38.25 REMARK 500 PHE A 95 -4.06 70.43 REMARK 500 GLU A 179 82.52 34.19 REMARK 500 ALA A 182 12.06 -69.61 REMARK 500 LYS A 281 31.67 -85.82 REMARK 500 GLU A 314 -127.13 55.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 124 OG1 REMARK 620 2 ADP A 402 O2B 84.5 REMARK 620 3 HOH A 506 O 176.8 98.4 REMARK 620 4 HOH A 509 O 85.8 106.4 92.1 REMARK 620 5 HOH A 511 O 91.8 172.7 85.4 79.6 REMARK 620 6 HOH A 514 O 80.3 84.2 101.2 161.6 88.9 REMARK 620 N 1 2 3 4 5 DBREF 8GJ8 A 70 357 PDB 8GJ8 8GJ8 70 357 SEQRES 1 A 288 MET GLN ASP THR SER GLY PRO VAL THR ILE LEU ASP LEU SEQRES 2 A 288 LEU LYS ASP GLU ARG SER GLN LEU SER ILE VAL THR PHE SEQRES 3 A 288 SER GLU GLN LEU ASP GLN ILE LEU GLY GLY GLY VAL PRO SEQRES 4 A 288 LEU THR LYS ILE THR GLU ILE CYS GLY ALA PRO GLY VAL SEQRES 5 A 288 GLY LYS THR GLN LEU SER MET GLN LEU SER VAL ASP VAL SEQRES 6 A 288 GLN ILE PRO LYS CYS PHE GLY GLY VAL GLU GLY GLN ALA SEQRES 7 A 288 ILE TYR ILE ASP THR GLU GLY SER PHE ILE VAL ASP ARG SEQRES 8 A 288 VAL VAL ASP ILE ALA THR ALA THR VAL GLN HIS CYS GLN SEQRES 9 A 288 HIS ILE ALA SER ILE GLU ASN ASN ALA GLU GLN ALA ASP SEQRES 10 A 288 SER MET GLN SER LEU THR MET GLU SER ILE LEU GLU GLY SEQRES 11 A 288 ILE HIS TYR PHE ARG CYS HIS ASP TYR VAL GLN LEU LEU SEQRES 12 A 288 ALA LEU VAL HIS THR LEU PRO ASP PHE LEU LYS GLN HIS SEQRES 13 A 288 PRO GLN ILE CYS LEU ILE VAL VAL ASP SER ILE ALA PHE SEQRES 14 A 288 PRO PHE ARG HIS HIS PHE GLU ASP TYR ALA LEU ARG THR SEQRES 15 A 288 ARG LEU LEU ASN GLY LEU ALA GLN SER PHE ILE LYS LEU SEQRES 16 A 288 ALA VAL ASP PHE LYS LEU ALA VAL LEU LEU THR ASN GLN SEQRES 17 A 288 MET THR THR LYS ILE SER ALA SER GLN GLN GLU THR SER SEQRES 18 A 288 HIS LEU ILE PRO ALA LEU GLY GLU SER TRP GLY HIS SER SEQRES 19 A 288 SER THR ILE ARG LEU ILE LEU TYR TRP GLN GLU LYS SER SEQRES 20 A 288 ARG TYR ALA LEU LEU TYR LYS SER PRO SER HIS LYS GLN SEQRES 21 A 288 ILE SER VAL PRO PHE GLN ILE THR THR ALA GLY ILE ARG SEQRES 22 A 288 ASP VAL CYS PRO THR SER GLY LEU GLU HIS HIS HIS HIS SEQRES 23 A 288 HIS HIS HET MG A 401 1 HET ADP A 402 27 HETNAM MG MAGNESIUM ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE FORMUL 2 MG MG 2+ FORMUL 3 ADP C10 H15 N5 O10 P2 FORMUL 4 HOH *44(H2 O) HELIX 1 AA1 THR A 78 GLN A 89 1 12 HELIX 2 AA2 SER A 96 GLY A 104 1 9 HELIX 3 AA3 GLY A 122 VAL A 134 1 13 HELIX 4 AA4 GLN A 135 ILE A 136 5 2 HELIX 5 AA5 PRO A 137 GLY A 141 5 5 HELIX 6 AA6 ILE A 157 ILE A 178 1 22 HELIX 7 AA7 GLU A 183 LEU A 191 1 9 HELIX 8 AA8 THR A 192 GLY A 199 1 8 HELIX 9 AA9 ASP A 207 HIS A 225 1 19 HELIX 10 AB1 ALA A 237 ARG A 241 5 5 HELIX 11 AB2 ASP A 246 PHE A 268 1 23 SHEET 1 AA1 2 SER A 91 ILE A 92 0 SHEET 2 AA1 2 VAL A 107 PRO A 108 -1 O VAL A 107 N ILE A 92 SHEET 1 AA2 9 ILE A 200 ARG A 204 0 SHEET 2 AA2 9 GLN A 146 ASP A 151 1 N ASP A 151 O PHE A 203 SHEET 3 AA2 9 ILE A 228 ASP A 234 1 O VAL A 232 N ILE A 150 SHEET 4 AA2 9 ALA A 271 ASN A 276 1 O LEU A 273 N ILE A 231 SHEET 5 AA2 9 ILE A 112 CYS A 116 1 N THR A 113 O VAL A 272 SHEET 6 AA2 9 ILE A 306 GLN A 313 1 O LEU A 310 N CYS A 116 SHEET 7 AA2 9 SER A 316 LYS A 323 -1 O LEU A 320 N ILE A 309 SHEET 8 AA2 9 SER A 331 THR A 337 -1 O VAL A 332 N ALA A 319 SHEET 9 AA2 9 GLY A 340 ARG A 342 -1 O GLY A 340 N THR A 337 LINK OG1 THR A 124 MG MG A 401 1555 1555 2.20 LINK MG MG A 401 O2B ADP A 402 1555 1555 2.02 LINK MG MG A 401 O HOH A 506 1555 1555 2.05 LINK MG MG A 401 O HOH A 509 1555 1555 2.17 LINK MG MG A 401 O HOH A 511 1555 1555 2.08 LINK MG MG A 401 O HOH A 514 1555 1555 2.19 CISPEP 1 GLY A 75 PRO A 76 0 4.12 CISPEP 2 ASP A 234 SER A 235 0 -0.19 CRYST1 96.032 96.032 55.683 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010413 0.006012 0.000000 0.00000 SCALE2 0.000000 0.012024 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017959 0.00000