HEADER SIGNALING PROTEIN 30-AUG-22 8GQE TITLE CRYSTAL STRUCTURE OF THE W285A MUTANT OF UVR8 IN COMPLEX WITH RUP2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: WD REPEAT-CONTAINING PROTEIN RUP2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROTEIN EARLY FLOWERING BY OVEREXPRESSION 2,PROTEIN COMPND 5 REPRESSOR OF UV-B PHOTOMORPHOGENESIS 2; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ULTRAVIOLET-B RECEPTOR UVR8; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: PROTEIN UV-B RESISTANCE 8,RCC1 DOMAIN-CONTAINING PROTEIN COMPND 11 UVR8; COMPND 12 ENGINEERED: YES; COMPND 13 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: RUP2; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 11 ORGANISM_COMMON: THALE CRESS; SOURCE 12 ORGANISM_TAXID: 3702; SOURCE 13 GENE: UVR8; SOURCE 14 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 16 EXPRESSION_SYSTEM_CELL_LINE: HEK293 KEYWDS SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.D.WANG,L.X.WANG,Z.Y.GUAN,H.F.CHANG,P.YIN REVDAT 4 29-NOV-23 8GQE 1 REMARK REVDAT 3 25-JAN-23 8GQE 1 JRNL REVDAT 2 21-SEP-22 8GQE 1 JRNL REVDAT 1 14-SEP-22 8GQE 0 JRNL AUTH L.WANG,Y.WANG,H.CHANG,H.REN,X.WU,J.WEN,Z.GUAN,L.MA,L.QIU, JRNL AUTH 2 J.YAN,D.ZHANG,X.HUANG,P.YIN JRNL TITL RUP2 FACILITATES UVR8 REDIMERIZATION VIA TWO INTERFACES. JRNL REF PLANT COMMUN. V. 4 00428 2023 JRNL REFN ISSN 2590-3462 JRNL PMID 36065466 JRNL DOI 10.1016/J.XPLC.2022.100428 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.1_4122 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.01 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 76500 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3905 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.0100 - 6.0700 0.93 2525 130 0.1979 0.2133 REMARK 3 2 6.0700 - 4.8200 0.99 2603 151 0.1716 0.1880 REMARK 3 3 4.8200 - 4.2100 0.99 2620 120 0.1442 0.1843 REMARK 3 4 4.2100 - 3.8300 1.00 2615 155 0.1583 0.1585 REMARK 3 5 3.8300 - 3.5500 1.00 2589 153 0.1601 0.1886 REMARK 3 6 3.5500 - 3.3400 1.00 2599 153 0.1704 0.2099 REMARK 3 7 3.3400 - 3.1800 1.00 2584 169 0.1641 0.1930 REMARK 3 8 3.1800 - 3.0400 1.00 2599 145 0.1758 0.2204 REMARK 3 9 3.0400 - 2.9200 1.00 2587 129 0.1784 0.2103 REMARK 3 10 2.9200 - 2.8200 1.00 2642 121 0.1840 0.2063 REMARK 3 11 2.8200 - 2.7300 1.00 2577 145 0.1795 0.2118 REMARK 3 12 2.7300 - 2.6500 1.00 2607 139 0.1855 0.2264 REMARK 3 13 2.6500 - 2.5800 1.00 2619 117 0.1852 0.2132 REMARK 3 14 2.5800 - 2.5200 1.00 2591 137 0.1807 0.1937 REMARK 3 15 2.5200 - 2.4600 1.00 2590 137 0.1759 0.2017 REMARK 3 16 2.4600 - 2.4100 1.00 2578 159 0.1765 0.2185 REMARK 3 17 2.4100 - 2.3600 1.00 2586 162 0.1791 0.2151 REMARK 3 18 2.3600 - 2.3200 1.00 2587 135 0.1842 0.2137 REMARK 3 19 2.3200 - 2.2800 1.00 2600 127 0.1710 0.1863 REMARK 3 20 2.2800 - 2.2400 1.00 2582 163 0.1767 0.2035 REMARK 3 21 2.2400 - 2.2000 1.00 2582 149 0.1794 0.2196 REMARK 3 22 2.2000 - 2.1700 1.00 2600 124 0.1785 0.2058 REMARK 3 23 2.1700 - 2.1400 1.00 2597 129 0.1736 0.1897 REMARK 3 24 2.1400 - 2.1100 1.00 2565 140 0.1815 0.2205 REMARK 3 25 2.1100 - 2.0800 1.00 2615 114 0.1846 0.2164 REMARK 3 26 2.0800 - 2.0500 1.00 2624 109 0.1986 0.2116 REMARK 3 27 2.0500 - 2.0300 1.00 2577 147 0.2029 0.2616 REMARK 3 28 2.0300 - 2.0000 0.98 2555 146 0.2111 0.2465 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.280 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 41.4805 69.8859 62.1317 REMARK 3 T TENSOR REMARK 3 T11: 0.2104 T22: 0.2259 REMARK 3 T33: 0.1994 T12: -0.0045 REMARK 3 T13: -0.0016 T23: 0.0031 REMARK 3 L TENSOR REMARK 3 L11: 0.3580 L22: 1.9551 REMARK 3 L33: 0.3991 L12: 0.2133 REMARK 3 L13: 0.0558 L23: -0.1850 REMARK 3 S TENSOR REMARK 3 S11: 0.0006 S12: -0.0085 S13: 0.0687 REMARK 3 S21: 0.0547 S22: 0.0284 S23: 0.3963 REMARK 3 S31: -0.1132 S32: -0.0620 S33: -0.0240 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8GQE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-SEP-22. REMARK 100 THE DEPOSITION ID IS D_1300031909. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JAN-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9785 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 76777 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 45.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4DNV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 6000, AMMONIUM CHLORIDE, REMARK 280 HEXAMMINECOBALT (III) CHLORIDE, SUCROSE, PH 5.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 86.69650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 86.69650 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 38.36850 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 86.69650 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 86.69650 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 38.36850 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 86.69650 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 86.69650 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 38.36850 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 86.69650 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 86.69650 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 38.36850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 19 REMARK 465 GLU A 368 REMARK 465 ASP A 369 REMARK 465 TYR A 370 REMARK 465 LYS A 371 REMARK 465 ASP A 372 REMARK 465 HIS A 373 REMARK 465 ASP A 374 REMARK 465 GLY A 375 REMARK 465 ASP A 376 REMARK 465 TYR A 377 REMARK 465 LYS A 378 REMARK 465 ASP A 379 REMARK 465 HIS A 380 REMARK 465 ASP A 381 REMARK 465 ILE A 382 REMARK 465 ASP A 383 REMARK 465 TYR A 384 REMARK 465 LYS A 385 REMARK 465 ASP A 386 REMARK 465 ASP A 387 REMARK 465 MET B 11 REMARK 465 ALA B 12 REMARK 465 ALA B 382 REMARK 465 SER B 383 REMARK 465 GLY B 384 REMARK 465 GLN B 385 REMARK 465 HIS B 386 REMARK 465 ILE B 387 REMARK 465 GLU B 388 REMARK 465 SER B 389 REMARK 465 SER B 390 REMARK 465 ASN B 391 REMARK 465 ILE B 392 REMARK 465 ASP B 393 REMARK 465 PRO B 394 REMARK 465 SER B 395 REMARK 465 SER B 396 REMARK 465 THR B 414 REMARK 465 GLY B 415 REMARK 465 LEU B 416 REMARK 465 THR B 417 REMARK 465 ASP B 418 REMARK 465 GLY B 419 REMARK 465 SER B 420 REMARK 465 SER B 421 REMARK 465 LEU B 422 REMARK 465 GLU B 423 REMARK 465 SER B 424 REMARK 465 ALA B 425 REMARK 465 TRP B 426 REMARK 465 SER B 427 REMARK 465 HIS B 428 REMARK 465 PRO B 429 REMARK 465 GLN B 430 REMARK 465 PHE B 431 REMARK 465 GLU B 432 REMARK 465 LYS B 433 REMARK 465 GLY B 434 REMARK 465 GLY B 435 REMARK 465 GLY B 436 REMARK 465 SER B 437 REMARK 465 GLY B 438 REMARK 465 GLY B 439 REMARK 465 GLY B 440 REMARK 465 SER B 441 REMARK 465 GLY B 442 REMARK 465 GLY B 443 REMARK 465 SER B 444 REMARK 465 ALA B 445 REMARK 465 TRP B 446 REMARK 465 SER B 447 REMARK 465 HIS B 448 REMARK 465 PRO B 449 REMARK 465 GLN B 450 REMARK 465 PHE B 451 REMARK 465 GLU B 452 REMARK 465 LYS B 453 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 691 O HOH B 728 1.83 REMARK 500 OE1 GLU A 276 O HOH A 401 1.84 REMARK 500 O HOH A 644 O HOH A 647 1.86 REMARK 500 O HOH A 481 O HOH B 737 1.92 REMARK 500 O HOH A 491 O HOH A 608 1.98 REMARK 500 O HOH A 598 O HOH A 624 2.02 REMARK 500 O HOH A 614 O HOH B 771 2.06 REMARK 500 O HOH A 532 O HOH A 618 2.07 REMARK 500 O HOH A 428 O HOH B 763 2.09 REMARK 500 OE2 GLU A 201 O HOH A 402 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 570 O HOH A 577 6554 1.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 177 NE - CZ - NH2 ANGL. DEV. = -8.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 41 36.11 -153.19 REMARK 500 LYS A 226 81.46 -155.90 REMARK 500 ARG A 282 -60.14 -139.15 REMARK 500 ASN A 302 31.39 -93.70 REMARK 500 SER A 330 -8.46 72.73 REMARK 500 VAL A 345 -66.88 -128.81 REMARK 500 ASN B 147 19.76 -140.37 REMARK 500 ARG B 286 14.75 -140.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 647 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH A 648 DISTANCE = 6.54 ANGSTROMS REMARK 525 HOH B 802 DISTANCE = 6.53 ANGSTROMS DBREF 8GQE A 20 366 UNP Q9FFA7 RUP2_ARATH 20 366 DBREF 8GQE B 12 421 UNP Q9FN03 UVR8_ARATH 12 421 SEQADV 8GQE MET A 19 UNP Q9FFA7 INITIATING METHIONINE SEQADV 8GQE LEU A 367 UNP Q9FFA7 EXPRESSION TAG SEQADV 8GQE GLU A 368 UNP Q9FFA7 EXPRESSION TAG SEQADV 8GQE ASP A 369 UNP Q9FFA7 EXPRESSION TAG SEQADV 8GQE TYR A 370 UNP Q9FFA7 EXPRESSION TAG SEQADV 8GQE LYS A 371 UNP Q9FFA7 EXPRESSION TAG SEQADV 8GQE ASP A 372 UNP Q9FFA7 EXPRESSION TAG SEQADV 8GQE HIS A 373 UNP Q9FFA7 EXPRESSION TAG SEQADV 8GQE ASP A 374 UNP Q9FFA7 EXPRESSION TAG SEQADV 8GQE GLY A 375 UNP Q9FFA7 EXPRESSION TAG SEQADV 8GQE ASP A 376 UNP Q9FFA7 EXPRESSION TAG SEQADV 8GQE TYR A 377 UNP Q9FFA7 EXPRESSION TAG SEQADV 8GQE LYS A 378 UNP Q9FFA7 EXPRESSION TAG SEQADV 8GQE ASP A 379 UNP Q9FFA7 EXPRESSION TAG SEQADV 8GQE HIS A 380 UNP Q9FFA7 EXPRESSION TAG SEQADV 8GQE ASP A 381 UNP Q9FFA7 EXPRESSION TAG SEQADV 8GQE ILE A 382 UNP Q9FFA7 EXPRESSION TAG SEQADV 8GQE ASP A 383 UNP Q9FFA7 EXPRESSION TAG SEQADV 8GQE TYR A 384 UNP Q9FFA7 EXPRESSION TAG SEQADV 8GQE LYS A 385 UNP Q9FFA7 EXPRESSION TAG SEQADV 8GQE ASP A 386 UNP Q9FFA7 EXPRESSION TAG SEQADV 8GQE ASP A 387 UNP Q9FFA7 EXPRESSION TAG SEQADV 8GQE MET B 11 UNP Q9FN03 INITIATING METHIONINE SEQADV 8GQE ALA B 285 UNP Q9FN03 TRP 285 ENGINEERED MUTATION SEQADV 8GQE LEU B 422 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE GLU B 423 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE SER B 424 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE ALA B 425 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE TRP B 426 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE SER B 427 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE HIS B 428 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE PRO B 429 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE GLN B 430 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE PHE B 431 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE GLU B 432 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE LYS B 433 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE GLY B 434 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE GLY B 435 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE GLY B 436 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE SER B 437 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE GLY B 438 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE GLY B 439 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE GLY B 440 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE SER B 441 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE GLY B 442 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE GLY B 443 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE SER B 444 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE ALA B 445 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE TRP B 446 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE SER B 447 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE HIS B 448 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE PRO B 449 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE GLN B 450 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE PHE B 451 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE GLU B 452 UNP Q9FN03 EXPRESSION TAG SEQADV 8GQE LYS B 453 UNP Q9FN03 EXPRESSION TAG SEQRES 1 A 369 MET ALA ARG TYR GLU TRP ASP LEU SER LEU SER THR VAL SEQRES 2 A 369 VAL SER SER SER SER SER SER ALA SER ASP VAL ILE GLY SEQRES 3 A 369 ALA ILE GLU PHE ASP PRO THR ASP ASN ILE VAL ALA THR SEQRES 4 A 369 ALA GLY ILE SER ARG LYS ILE ARG PHE TYR GLY LEU PRO SEQRES 5 A 369 SER LEU LEU ARG ASN ASN ALA VAL SER GLY THR GLY VAL SEQRES 6 A 369 SER PHE VAL ASP GLN ALA THR ALA CYS GLU TYR TYR ILE SEQRES 7 A 369 CYS THR PRO ALA LYS LEU SER SER LEU ARG TRP ARG PRO SEQRES 8 A 369 GLY SER GLY GLY ARG VAL ILE GLY SER GLY ASP TYR ASP SEQRES 9 A 369 GLY VAL VAL MET GLU TYR ASP LEU GLU LYS ARG THR PRO SEQRES 10 A 369 VAL PHE GLU ARG ASP GLU HIS GLY GLY ARG ARG VAL TRP SEQRES 11 A 369 SER VAL ASP TYR THR ARG HIS GLY GLY ALA SER THR VAL SEQRES 12 A 369 GLY ALA SER GLY SER ASP ASP GLY THR MET GLN VAL TRP SEQRES 13 A 369 ASP PRO ARG CYS PRO PRO GLU GLU SER VAL GLY VAL VAL SEQRES 14 A 369 ARG PRO ALA GLY ILE CYS ARG SER ALA VAL CYS CYS VAL SEQRES 15 A 369 GLU PHE ASP PRO SER GLY GLY PRO ALA VAL ALA VAL GLY SEQRES 16 A 369 CYS ALA ASP ARG LYS GLY TYR VAL TYR ASP ILE ARG LYS SEQRES 17 A 369 LEU VAL ASP PRO ALA LEU THR LEU GLN GLY HIS THR LYS SEQRES 18 A 369 THR VAL SER TYR VAL ARG PHE LEU ASP GLY GLY THR VAL SEQRES 19 A 369 VAL THR ALA GLY THR ASP GLY CYS LEU LYS LEU TRP SER SEQRES 20 A 369 VAL GLU ASP GLY ARG VAL ILE ARG THR TYR GLU GLY HIS SEQRES 21 A 369 VAL ASN ASN ARG ASN PHE VAL GLY LEU SER VAL TRP ARG SEQRES 22 A 369 ASN GLY ALA LEU PHE GLY CYS GLY SER GLU ASN ASN ARG SEQRES 23 A 369 VAL PHE VAL TYR ASP ARG ARG TRP GLY LYS PRO VAL TRP SEQRES 24 A 369 VAL ASP GLY PHE GLU PRO VAL GLY MET ASN SER GLY SER SEQRES 25 A 369 ASP LYS ARG PHE VAL SER SER VAL CYS TRP ARG GLN SER SEQRES 26 A 369 GLY VAL ASP GLN CYS THR LEU VAL ALA GLY GLY SER ASP SEQRES 27 A 369 GLY VAL LEU GLN VAL TYR VAL GLY LYS ARG LEU GLU ASP SEQRES 28 A 369 TYR LYS ASP HIS ASP GLY ASP TYR LYS ASP HIS ASP ILE SEQRES 29 A 369 ASP TYR LYS ASP ASP SEQRES 1 B 443 MET ALA PRO PRO ARG LYS VAL LEU ILE ILE SER ALA GLY SEQRES 2 B 443 ALA SER HIS SER VAL ALA LEU LEU SER GLY ASP ILE VAL SEQRES 3 B 443 CYS SER TRP GLY ARG GLY GLU ASP GLY GLN LEU GLY HIS SEQRES 4 B 443 GLY ASP ALA GLU ASP ARG PRO SER PRO THR GLN LEU SER SEQRES 5 B 443 ALA LEU ASP GLY HIS GLN ILE VAL SER VAL THR CYS GLY SEQRES 6 B 443 ALA ASP HIS THR VAL ALA TYR SER GLN SER GLY MET GLU SEQRES 7 B 443 VAL TYR SER TRP GLY TRP GLY ASP PHE GLY ARG LEU GLY SEQRES 8 B 443 HIS GLY ASN SER SER ASP LEU PHE THR PRO LEU PRO ILE SEQRES 9 B 443 LYS ALA LEU HIS GLY ILE ARG ILE LYS GLN ILE ALA CYS SEQRES 10 B 443 GLY ASP SER HIS CYS LEU ALA VAL THR MET GLU GLY GLU SEQRES 11 B 443 VAL GLN SER TRP GLY ARG ASN GLN ASN GLY GLN LEU GLY SEQRES 12 B 443 LEU GLY ASP THR GLU ASP SER LEU VAL PRO GLN LYS ILE SEQRES 13 B 443 GLN ALA PHE GLU GLY ILE ARG ILE LYS MET VAL ALA ALA SEQRES 14 B 443 GLY ALA GLU HIS THR ALA ALA VAL THR GLU ASP GLY ASP SEQRES 15 B 443 LEU TYR GLY TRP GLY TRP GLY ARG TYR GLY ASN LEU GLY SEQRES 16 B 443 LEU GLY ASP ARG THR ASP ARG LEU VAL PRO GLU ARG VAL SEQRES 17 B 443 THR SER THR GLY GLY GLU LYS MET SER MET VAL ALA CYS SEQRES 18 B 443 GLY TRP ARG HIS THR ILE SER VAL SER TYR SER GLY ALA SEQRES 19 B 443 LEU TYR THR TYR GLY TRP SER LYS TYR GLY GLN LEU GLY SEQRES 20 B 443 HIS GLY ASP LEU GLU ASP HIS LEU ILE PRO HIS LYS LEU SEQRES 21 B 443 GLU ALA LEU SER ASN SER PHE ILE SER GLN ILE SER GLY SEQRES 22 B 443 GLY ALA ARG HIS THR MET ALA LEU THR SER ASP GLY LYS SEQRES 23 B 443 LEU TYR GLY TRP GLY TRP ASN LYS PHE GLY GLN VAL GLY SEQRES 24 B 443 VAL GLY ASN ASN LEU ASP GLN CYS SER PRO VAL GLN VAL SEQRES 25 B 443 ARG PHE PRO ASP ASP GLN LYS VAL VAL GLN VAL SER CYS SEQRES 26 B 443 GLY TRP ARG HIS THR LEU ALA VAL THR GLU ARG ASN ASN SEQRES 27 B 443 VAL PHE ALA TRP GLY ARG GLY THR ASN GLY GLN LEU GLY SEQRES 28 B 443 ILE GLY GLU SER VAL ASP ARG ASN PHE PRO LYS ILE ILE SEQRES 29 B 443 GLU ALA LEU SER VAL ASP GLY ALA SER GLY GLN HIS ILE SEQRES 30 B 443 GLU SER SER ASN ILE ASP PRO SER SER GLY LYS SER TRP SEQRES 31 B 443 VAL SER PRO ALA GLU ARG TYR ALA VAL VAL PRO ASP GLU SEQRES 32 B 443 THR GLY LEU THR ASP GLY SER SER LEU GLU SER ALA TRP SEQRES 33 B 443 SER HIS PRO GLN PHE GLU LYS GLY GLY GLY SER GLY GLY SEQRES 34 B 443 GLY SER GLY GLY SER ALA TRP SER HIS PRO GLN PHE GLU SEQRES 35 B 443 LYS HET MES B 501 12 HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID FORMUL 3 MES C6 H13 N O4 S FORMUL 4 HOH *450(H2 O) HELIX 1 AA1 LEU A 69 ASN A 76 1 8 HELIX 2 AA2 GLN A 88 CYS A 92 1 5 HELIX 3 AA3 GLY A 156 THR A 160 5 5 HELIX 4 AA4 SER B 62 ASP B 65 5 4 HELIX 5 AA5 GLY B 95 ARG B 99 5 5 HELIX 6 AA6 LYS B 115 HIS B 118 5 4 HELIX 7 AA7 GLN B 167 GLU B 170 5 4 HELIX 8 AA8 GLU B 271 SER B 274 5 4 HELIX 9 AA9 PHE B 324 GLN B 328 5 5 HELIX 10 AB1 GLU B 375 SER B 378 5 4 HELIX 11 AB2 SER B 402 ARG B 406 5 5 SHEET 1 AA1 5 SER A 84 ASP A 87 0 SHEET 2 AA1 5 TRP A 24 SER A 33 1 N VAL A 31 O VAL A 86 SHEET 3 AA1 5 LEU A 359 ARG A 366 -1 O LYS A 365 N ASP A 25 SHEET 4 AA1 5 GLN A 347 GLY A 354 -1 N LEU A 350 O TYR A 362 SHEET 5 AA1 5 VAL A 335 TRP A 340 -1 N CYS A 339 O VAL A 351 SHEET 1 AA2 4 ILE A 43 PHE A 48 0 SHEET 2 AA2 4 ILE A 54 GLY A 59 -1 O ALA A 56 N GLU A 47 SHEET 3 AA2 4 LYS A 63 GLY A 68 -1 O TYR A 67 N VAL A 55 SHEET 4 AA2 4 TYR A 94 CYS A 97 -1 O ILE A 96 N ILE A 64 SHEET 1 AA3 4 LEU A 102 TRP A 107 0 SHEET 2 AA3 4 VAL A 115 ASP A 120 -1 O GLY A 117 N ARG A 106 SHEET 3 AA3 4 VAL A 125 ASP A 129 -1 O TYR A 128 N ILE A 116 SHEET 4 AA3 4 THR A 134 ARG A 139 -1 O VAL A 136 N GLU A 127 SHEET 1 AA4 4 VAL A 147 TYR A 152 0 SHEET 2 AA4 4 GLY A 162 SER A 166 -1 O GLY A 165 N TRP A 148 SHEET 3 AA4 4 MET A 171 TRP A 174 -1 O TRP A 174 N GLY A 162 SHEET 4 AA4 4 GLY A 185 VAL A 187 -1 O GLY A 185 N VAL A 173 SHEET 1 AA5 4 VAL A 197 PHE A 202 0 SHEET 2 AA5 4 ALA A 209 CYS A 214 -1 O ALA A 211 N GLU A 201 SHEET 3 AA5 4 GLY A 219 ASP A 223 -1 O TYR A 222 N VAL A 210 SHEET 4 AA5 4 LEU A 232 LEU A 234 -1 O LEU A 234 N GLY A 219 SHEET 1 AA6 4 VAL A 241 ASP A 248 0 SHEET 2 AA6 4 THR A 251 GLY A 256 -1 O VAL A 253 N ARG A 245 SHEET 3 AA6 4 CYS A 260 SER A 265 -1 O TRP A 264 N VAL A 252 SHEET 4 AA6 4 VAL A 271 GLU A 276 -1 O ILE A 272 N LEU A 263 SHEET 1 AA7 4 LEU A 287 TRP A 290 0 SHEET 2 AA7 4 LEU A 295 CYS A 298 -1 O GLY A 297 N SER A 288 SHEET 3 AA7 4 VAL A 305 ASP A 309 -1 O PHE A 306 N CYS A 298 SHEET 4 AA7 4 TRP A 317 ASP A 319 -1 O TRP A 317 N VAL A 307 SHEET 1 AA8 4 VAL B 17 ALA B 22 0 SHEET 2 AA8 4 HIS B 26 LEU B 31 -1 O VAL B 28 N SER B 21 SHEET 3 AA8 4 ILE B 35 GLY B 40 -1 O ILE B 35 N LEU B 31 SHEET 4 AA8 4 ARG B 55 GLN B 60 -1 O ARG B 55 N GLY B 40 SHEET 1 AA9 4 SER B 71 CYS B 74 0 SHEET 2 AA9 4 HIS B 78 SER B 83 -1 O VAL B 80 N THR B 73 SHEET 3 AA9 4 GLU B 88 GLY B 93 -1 O TYR B 90 N ALA B 81 SHEET 4 AA9 4 LEU B 108 PRO B 113 -1 O LEU B 108 N GLY B 93 SHEET 1 AB1 4 ILE B 122 CYS B 127 0 SHEET 2 AB1 4 HIS B 131 THR B 136 -1 O VAL B 135 N LYS B 123 SHEET 3 AB1 4 VAL B 141 GLY B 145 -1 O GLN B 142 N ALA B 134 SHEET 4 AB1 4 SER B 160 LYS B 165 -1 O SER B 160 N GLY B 145 SHEET 1 AB2 4 ILE B 174 ALA B 179 0 SHEET 2 AB2 4 HIS B 183 THR B 188 -1 O ALA B 185 N ALA B 178 SHEET 3 AB2 4 LEU B 193 GLY B 197 -1 O TRP B 196 N THR B 184 SHEET 4 AB2 4 ARG B 212 ARG B 217 -1 O ARG B 212 N GLY B 197 SHEET 1 AB3 4 MET B 226 CYS B 231 0 SHEET 2 AB3 4 HIS B 235 SER B 240 -1 O VAL B 239 N SER B 227 SHEET 3 AB3 4 LEU B 245 GLY B 249 -1 O TYR B 246 N SER B 238 SHEET 4 AB3 4 HIS B 264 LYS B 269 -1 O HIS B 268 N THR B 247 SHEET 1 AB4 4 ILE B 278 GLY B 283 0 SHEET 2 AB4 4 HIS B 287 THR B 292 -1 O LEU B 291 N SER B 279 SHEET 3 AB4 4 LEU B 297 GLY B 301 -1 O TYR B 298 N ALA B 290 SHEET 4 AB4 4 GLN B 316 VAL B 322 -1 O VAL B 322 N LEU B 297 SHEET 1 AB5 4 VAL B 330 CYS B 335 0 SHEET 2 AB5 4 HIS B 339 THR B 344 -1 O VAL B 343 N VAL B 331 SHEET 3 AB5 4 VAL B 349 GLY B 353 -1 O PHE B 350 N ALA B 342 SHEET 4 AB5 4 ARG B 368 ILE B 373 -1 O ARG B 368 N GLY B 353 CRYST1 173.393 173.393 76.737 90.00 90.00 90.00 I 4 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005767 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005767 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013032 0.00000