HEADER STRUCTURAL PROTEIN 05-SEP-22 8GS7 TITLE SOLUTION NMR STRUCTURE OF N-TERMINAL DOMAIN OF TRICONEPHILA CLAVIPES TITLE 2 MAJOR AMPULLATE SPIDROIN 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAJOR AMPULLATE SPIDROIN 2 VARIANT 3; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRICHONEPHILA CLAVIPES; SOURCE 3 ORGANISM_TAXID: 2585209; SOURCE 4 GENE: MASP2; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DRAGLINE SPIDER SILK, SPIDER SILK ASSEMBLY, PH REGULATION, STRUCTURAL KEYWDS 2 PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR N.A.OKTAVIANI,A.D.MALAY,A.MATSUGAMI,F.HAYASHI,K.NUMATA REVDAT 4 15-MAY-24 8GS7 1 REMARK REVDAT 3 26-APR-23 8GS7 1 JRNL REVDAT 2 12-APR-23 8GS7 1 JRNL REVDAT 1 15-MAR-23 8GS7 0 JRNL AUTH N.A.OKTAVIANI,A.D.MALAY,A.MATSUGAMI,F.HAYASHI,K.NUMATA JRNL TITL UNUSUAL P K A VALUES MEDIATE THE SELF-ASSEMBLY OF SPIDER JRNL TITL 2 DRAGLINE SILK PROTEINS. JRNL REF BIOMACROMOLECULES V. 24 1604 2023 JRNL REFN ESSN 1526-4602 JRNL PMID 36990448 JRNL DOI 10.1021/ACS.BIOMAC.2C01344 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8GS7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-SEP-22. REMARK 100 THE DEPOSITION ID IS D_1300031978. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 300 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1 MM [U-13C; U-15N] N-TERMINAL REMARK 210 DOMAIN OF NTD MASP2 FROM REMARK 210 TRICONEPHILA CLAVIPES, 0.1 MM REMARK 210 DSS, 10 % V/V [U-100% 2H] D2O, REMARK 210 300 MM SODIUM CHLORIDE, 10 MM REMARK 210 SODIUM PHOSPHATE, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC; 3D CBCA(CO)NH; 3D REMARK 210 HNCACB; 3D HNCO; 3D HN(CA)CO; 3D REMARK 210 HNHAHB; 3D HBHA(CO)NH; 3D 1H-13C REMARK 210 NOESY ALIPHATIC; 3D 1H-15N NOESY; REMARK 210 3D H(CCO)NH; 3D HCCH-TOCSY; 2D REMARK 210 HB(CBCG)CD(HD); 2D HB(CBCGCD) REMARK 210 CE(HE); 2D HB(CBCGCD)CE(HE) REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, NMRFAM-SPARKY, MAGRO REMARK 210 -NMRVIEW, CYANA REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 93 -52.98 -122.14 REMARK 500 1 THR A 110 -62.14 -129.02 REMARK 500 1 SER A 132 -95.80 50.55 REMARK 500 1 ALA A 133 99.73 65.27 REMARK 500 2 ASN A 60 77.29 47.85 REMARK 500 2 SER A 63 65.43 -113.11 REMARK 500 2 GLU A 85 -94.90 57.49 REMARK 500 2 GLN A 86 -56.46 -140.66 REMARK 500 2 SER A 90 80.05 -152.58 REMARK 500 2 VAL A 93 -54.65 -121.59 REMARK 500 2 THR A 110 36.86 -169.93 REMARK 500 2 SER A 132 -164.33 62.13 REMARK 500 2 SER A 137 108.60 61.47 REMARK 500 3 ALA A 7 92.16 176.20 REMARK 500 3 GLN A 86 -46.72 -150.26 REMARK 500 3 THR A 110 -60.26 -134.49 REMARK 500 3 SER A 137 89.49 63.26 REMARK 500 4 MET A 4 28.77 49.92 REMARK 500 4 GLN A 6 -173.67 53.26 REMARK 500 4 GLU A 85 135.82 -173.35 REMARK 500 4 THR A 110 -60.92 -131.03 REMARK 500 5 GLU A 85 102.47 -177.09 REMARK 500 5 SER A 132 -159.88 64.51 REMARK 500 6 SER A 9 147.63 179.68 REMARK 500 6 ASN A 60 -160.45 48.49 REMARK 500 6 THR A 110 -58.07 -133.39 REMARK 500 6 ALA A 131 -87.53 -89.83 REMARK 500 6 SER A 137 -66.67 72.15 REMARK 500 7 ALA A 7 77.55 56.40 REMARK 500 7 ASN A 60 177.20 55.40 REMARK 500 7 THR A 110 -45.46 -145.55 REMARK 500 7 SER A 132 177.95 55.30 REMARK 500 7 GLU A 135 32.24 -160.87 REMARK 500 8 GLU A 85 -173.96 52.54 REMARK 500 8 SER A 132 -164.00 58.02 REMARK 500 9 GLN A 6 -88.20 62.08 REMARK 500 9 SER A 9 75.84 60.13 REMARK 500 9 THR A 110 -55.01 -136.13 REMARK 500 10 ALA A 5 -64.62 -107.18 REMARK 500 10 ASN A 60 -169.44 48.47 REMARK 500 10 SER A 132 96.82 179.55 REMARK 500 11 VAL A 84 107.76 -53.84 REMARK 500 11 GLU A 85 -97.28 48.85 REMARK 500 11 THR A 110 -62.41 -128.52 REMARK 500 11 SER A 132 109.12 -175.08 REMARK 500 11 ALA A 133 91.22 -177.07 REMARK 500 12 ARG A 8 137.98 -173.80 REMARK 500 12 ASN A 60 -160.04 53.61 REMARK 500 12 GLU A 85 -76.12 -177.12 REMARK 500 12 GLN A 86 73.50 -177.53 REMARK 500 REMARK 500 THIS ENTRY HAS 89 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 50353 RELATED DB: BMRB DBREF1 8GS7 A 5 138 UNP A0A2S2B4G5_NEPCL DBREF2 8GS7 A A0A2S2B4G5 23 156 SEQADV 8GS7 GLY A 1 UNP A0A2S2B4G EXPRESSION TAG SEQADV 8GS7 SER A 2 UNP A0A2S2B4G EXPRESSION TAG SEQADV 8GS7 HIS A 3 UNP A0A2S2B4G EXPRESSION TAG SEQADV 8GS7 MET A 4 UNP A0A2S2B4G EXPRESSION TAG SEQRES 1 A 138 GLY SER HIS MET ALA GLN ALA ARG SER PRO TRP SER ASP SEQRES 2 A 138 THR ALA THR ALA ASP ALA PHE ILE GLN ASN PHE LEU ALA SEQRES 3 A 138 ALA VAL SER GLY SER GLY ALA PHE THR SER ASP GLN LEU SEQRES 4 A 138 ASP ASP MET SER THR ILE GLY ASP THR ILE MET SER ALA SEQRES 5 A 138 MET ASP LYS MET ALA ARG SER ASN LYS SER SER GLN HIS SEQRES 6 A 138 LYS LEU GLN ALA LEU ASN MET ALA PHE ALA SER SER MET SEQRES 7 A 138 ALA GLU ILE ALA ALA VAL GLU GLN GLY GLY MET SER MET SEQRES 8 A 138 ALA VAL LYS THR ASN ALA ILE VAL ASP GLY LEU ASN SER SEQRES 9 A 138 ALA PHE TYR MET THR THR GLY ALA ALA ASN PRO GLN PHE SEQRES 10 A 138 VAL ASN GLU MET ARG SER LEU ILE SER MET ILE SER ALA SEQRES 11 A 138 ALA SER ALA ASN GLU VAL SER TYR HELIX 1 AA1 SER A 9 SER A 12 5 4 HELIX 2 AA2 ASP A 13 GLY A 32 1 20 HELIX 3 AA3 THR A 35 SER A 59 1 25 HELIX 4 AA4 SER A 63 GLN A 86 1 24 HELIX 5 AA5 VAL A 93 THR A 110 1 18 HELIX 6 AA6 ASN A 114 SER A 132 1 19 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 TER 1970 TYR A 138 ENDMDL MODEL 2 TER 1970 TYR A 138 ENDMDL MODEL 3 TER 1970 TYR A 138 ENDMDL MODEL 4 TER 1970 TYR A 138 ENDMDL MODEL 5 TER 1970 TYR A 138 ENDMDL MODEL 6 TER 1970 TYR A 138 ENDMDL MODEL 7 TER 1970 TYR A 138 ENDMDL MODEL 8 TER 1970 TYR A 138 ENDMDL MODEL 9 TER 1970 TYR A 138 ENDMDL MODEL 10 TER 1970 TYR A 138 ENDMDL MODEL 11 TER 1970 TYR A 138 ENDMDL MODEL 12 TER 1970 TYR A 138 ENDMDL MODEL 13 TER 1970 TYR A 138 ENDMDL MODEL 14 TER 1970 TYR A 138 ENDMDL MODEL 15 TER 1970 TYR A 138 ENDMDL MODEL 16 TER 1970 TYR A 138 ENDMDL MODEL 17 TER 1970 TYR A 138 ENDMDL MODEL 18 TER 1970 TYR A 138 ENDMDL MODEL 19 TER 1970 TYR A 138 ENDMDL MODEL 20 TER 1970 TYR A 138 ENDMDL MASTER 149 0 0 6 0 0 0 6 1004 1 0 11 END