HEADER HYDROLASE 18-SEP-22 8GX2 TITLE THE CRYSTAL STRUCTURE OF HUMAN CTSL IN COMPLEX WITH 14C COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROCATHEPSIN L; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CATHEPSIN L1,MAJOR EXCRETED PROTEIN,MEP; COMPND 5 EC: 3.4.22.15; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CTSL, CTSL1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS HUMAN PROTEASE, CTSL, ANTIVIRAL INHIBITOR, 14C, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.ZHAO,M.SHAO,J.ZHAO,H.YANG,Z.RAO REVDAT 1 20-SEP-23 8GX2 0 JRNL AUTH Y.ZHAO,M.SHAO,J.ZHAO,H.YANG,Z.RAO JRNL TITL THE CRYSTAL STRUCTURE OF HUMAN CTSL IN COMPLEX WITH 14A JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.35 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 33206 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1995 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.3500 - 4.8200 0.99 2373 151 0.2313 0.2486 REMARK 3 2 4.8200 - 3.8300 1.00 2281 145 0.1628 0.1941 REMARK 3 3 3.8300 - 3.3400 1.00 2270 146 0.1673 0.2039 REMARK 3 4 3.3400 - 3.0400 1.00 2224 142 0.1832 0.2241 REMARK 3 5 3.0400 - 2.8200 1.00 2237 143 0.1889 0.2097 REMARK 3 6 2.8200 - 2.6500 1.00 2211 142 0.1916 0.2488 REMARK 3 7 2.6500 - 2.5200 1.00 2213 141 0.1920 0.2353 REMARK 3 8 2.5200 - 2.4100 1.00 2217 141 0.1987 0.2794 REMARK 3 9 2.4100 - 2.3200 1.00 2202 141 0.1967 0.2517 REMARK 3 10 2.3200 - 2.2400 1.00 2195 142 0.2041 0.2211 REMARK 3 11 2.2400 - 2.1700 1.00 2211 141 0.2069 0.2191 REMARK 3 12 2.1700 - 2.1100 1.00 2223 142 0.2157 0.2754 REMARK 3 13 2.1100 - 2.0500 1.00 2167 138 0.2277 0.2830 REMARK 3 14 2.0500 - 2.0000 1.00 2187 140 0.2426 0.2771 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.590 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.58 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 10.0278 -18.9514 21.6476 REMARK 3 T TENSOR REMARK 3 T11: 0.1565 T22: 0.1205 REMARK 3 T33: 0.1443 T12: 0.0102 REMARK 3 T13: 0.0149 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 1.4350 L22: 0.4717 REMARK 3 L33: 0.3650 L12: 0.5031 REMARK 3 L13: 0.3478 L23: 0.2321 REMARK 3 S TENSOR REMARK 3 S11: -0.0105 S12: 0.0305 S13: 0.0057 REMARK 3 S21: -0.0179 S22: 0.0203 S23: -0.0026 REMARK 3 S31: 0.0066 S32: -0.0267 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8GX2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-SEP-22. REMARK 100 THE DEPOSITION ID IS D_1300032358. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-SEP-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL02U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979183 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33284 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 44.350 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 17.00 REMARK 200 R MERGE (I) : 0.33200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.4100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 17.34 REMARK 200 R MERGE FOR SHELL (I) : 1.42200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.730 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6F06 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 22.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM SODIUM ACETATE (PH 4.1), 15% REMARK 280 (W/V) PEG 2000, 8MG/ML PROTEIN, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 289.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.13500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.51000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.13500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 54.51000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -112 REMARK 465 ASN A -111 REMARK 465 PRO A -110 REMARK 465 THR A -109 REMARK 465 LEU A -108 REMARK 465 ILE A -107 REMARK 465 LEU A -106 REMARK 465 ALA A -105 REMARK 465 ALA A -104 REMARK 465 PHE A -103 REMARK 465 CYS A -102 REMARK 465 LEU A -101 REMARK 465 GLY A -100 REMARK 465 ILE A -99 REMARK 465 ALA A -98 REMARK 465 SER A -97 REMARK 465 ALA A -96 REMARK 465 THR A -95 REMARK 465 LEU A -94 REMARK 465 THR A -93 REMARK 465 PHE A -92 REMARK 465 ASP A -91 REMARK 465 HIS A -90 REMARK 465 SER A -89 REMARK 465 LEU A -88 REMARK 465 GLU A -87 REMARK 465 ALA A -86 REMARK 465 GLN A -85 REMARK 465 TRP A -84 REMARK 465 THR A -83 REMARK 465 LYS A -82 REMARK 465 TRP A -81 REMARK 465 LYS A -80 REMARK 465 ALA A -79 REMARK 465 MET A -78 REMARK 465 HIS A -77 REMARK 465 ASN A -76 REMARK 465 ARG A -75 REMARK 465 LEU A -74 REMARK 465 TYR A -73 REMARK 465 GLY A -72 REMARK 465 MET A -71 REMARK 465 ASN A -70 REMARK 465 GLU A -69 REMARK 465 GLU A -68 REMARK 465 GLY A -67 REMARK 465 TRP A -66 REMARK 465 ARG A -65 REMARK 465 ARG A -64 REMARK 465 ALA A -63 REMARK 465 VAL A -62 REMARK 465 TRP A -61 REMARK 465 GLU A -60 REMARK 465 LYS A -59 REMARK 465 ASN A -58 REMARK 465 MET A -57 REMARK 465 LYS A -56 REMARK 465 MET A -55 REMARK 465 ILE A -54 REMARK 465 GLU A -53 REMARK 465 LEU A -52 REMARK 465 HIS A -51 REMARK 465 ASN A -50 REMARK 465 GLN A -49 REMARK 465 GLU A -48 REMARK 465 TYR A -47 REMARK 465 ARG A -46 REMARK 465 GLU A -45 REMARK 465 GLY A -44 REMARK 465 LYS A -43 REMARK 465 HIS A -42 REMARK 465 SER A -41 REMARK 465 PHE A -40 REMARK 465 THR A -39 REMARK 465 MET A -38 REMARK 465 ALA A -37 REMARK 465 MET A -36 REMARK 465 ASN A -35 REMARK 465 ALA A -34 REMARK 465 PHE A -33 REMARK 465 GLY A -32 REMARK 465 ASP A -31 REMARK 465 MET A -30 REMARK 465 THR A -29 REMARK 465 SER A -28 REMARK 465 GLU A -27 REMARK 465 GLU A -26 REMARK 465 PHE A -25 REMARK 465 ARG A -24 REMARK 465 GLN A -23 REMARK 465 VAL A -22 REMARK 465 MET A -21 REMARK 465 ASN A -20 REMARK 465 GLY A -19 REMARK 465 PHE A -18 REMARK 465 GLN A -17 REMARK 465 ASN A -16 REMARK 465 ARG A -15 REMARK 465 LYS A -14 REMARK 465 PRO A -13 REMARK 465 ARG A -12 REMARK 465 LYS A -11 REMARK 465 GLY A -10 REMARK 465 LYS A -9 REMARK 465 VAL A -8 REMARK 465 PHE A -7 REMARK 465 GLN A -6 REMARK 465 GLU A -5 REMARK 465 PRO A -4 REMARK 465 LEU A -3 REMARK 465 PHE A -2 REMARK 465 TYR A -1 REMARK 465 GLU A 0 REMARK 465 MET B -112 REMARK 465 ASN B -111 REMARK 465 PRO B -110 REMARK 465 THR B -109 REMARK 465 LEU B -108 REMARK 465 ILE B -107 REMARK 465 LEU B -106 REMARK 465 ALA B -105 REMARK 465 ALA B -104 REMARK 465 PHE B -103 REMARK 465 CYS B -102 REMARK 465 LEU B -101 REMARK 465 GLY B -100 REMARK 465 ILE B -99 REMARK 465 ALA B -98 REMARK 465 SER B -97 REMARK 465 ALA B -96 REMARK 465 THR B -95 REMARK 465 LEU B -94 REMARK 465 THR B -93 REMARK 465 PHE B -92 REMARK 465 ASP B -91 REMARK 465 HIS B -90 REMARK 465 SER B -89 REMARK 465 LEU B -88 REMARK 465 GLU B -87 REMARK 465 ALA B -86 REMARK 465 GLN B -85 REMARK 465 TRP B -84 REMARK 465 THR B -83 REMARK 465 LYS B -82 REMARK 465 TRP B -81 REMARK 465 LYS B -80 REMARK 465 ALA B -79 REMARK 465 MET B -78 REMARK 465 HIS B -77 REMARK 465 ASN B -76 REMARK 465 ARG B -75 REMARK 465 LEU B -74 REMARK 465 TYR B -73 REMARK 465 GLY B -72 REMARK 465 MET B -71 REMARK 465 ASN B -70 REMARK 465 GLU B -69 REMARK 465 GLU B -68 REMARK 465 GLY B -67 REMARK 465 TRP B -66 REMARK 465 ARG B -65 REMARK 465 ARG B -64 REMARK 465 ALA B -63 REMARK 465 VAL B -62 REMARK 465 TRP B -61 REMARK 465 GLU B -60 REMARK 465 LYS B -59 REMARK 465 ASN B -58 REMARK 465 MET B -57 REMARK 465 LYS B -56 REMARK 465 MET B -55 REMARK 465 ILE B -54 REMARK 465 GLU B -53 REMARK 465 LEU B -52 REMARK 465 HIS B -51 REMARK 465 ASN B -50 REMARK 465 GLN B -49 REMARK 465 GLU B -48 REMARK 465 TYR B -47 REMARK 465 ARG B -46 REMARK 465 GLU B -45 REMARK 465 GLY B -44 REMARK 465 LYS B -43 REMARK 465 HIS B -42 REMARK 465 SER B -41 REMARK 465 PHE B -40 REMARK 465 THR B -39 REMARK 465 MET B -38 REMARK 465 ALA B -37 REMARK 465 MET B -36 REMARK 465 ASN B -35 REMARK 465 ALA B -34 REMARK 465 PHE B -33 REMARK 465 GLY B -32 REMARK 465 ASP B -31 REMARK 465 MET B -30 REMARK 465 THR B -29 REMARK 465 SER B -28 REMARK 465 GLU B -27 REMARK 465 GLU B -26 REMARK 465 PHE B -25 REMARK 465 ARG B -24 REMARK 465 GLN B -23 REMARK 465 VAL B -22 REMARK 465 MET B -21 REMARK 465 ASN B -20 REMARK 465 GLY B -19 REMARK 465 PHE B -18 REMARK 465 GLN B -17 REMARK 465 ASN B -16 REMARK 465 ARG B -15 REMARK 465 LYS B -14 REMARK 465 PRO B -13 REMARK 465 ARG B -12 REMARK 465 LYS B -11 REMARK 465 GLY B -10 REMARK 465 LYS B -9 REMARK 465 VAL B -8 REMARK 465 PHE B -7 REMARK 465 GLN B -6 REMARK 465 GLU B -5 REMARK 465 PRO B -4 REMARK 465 LEU B -3 REMARK 465 PHE B -2 REMARK 465 TYR B -1 REMARK 465 GLU B 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 177 OG REMARK 470 ASP A 178 CG OD1 OD2 REMARK 470 ASN A 179 CG OD1 ND2 REMARK 470 ARG A 205 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 206 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 207 CG OD1 ND2 REMARK 470 HIS A 208 CG ND1 CD2 CE1 NE2 REMARK 470 SER B 177 OG REMARK 470 ASP B 178 CG OD1 OD2 REMARK 470 ASN B 179 CG OD1 ND2 REMARK 470 ARG B 205 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 206 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 207 CG OD1 ND2 REMARK 470 HIS B 208 CG ND1 CD2 CE1 NE2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 87 CD REMARK 480 GLU B 87 CD REMARK 480 LYS B 147 CE REMARK 480 GLU B 148 CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 147 -50.33 -124.37 REMARK 500 ASP A 155 47.59 -93.33 REMARK 500 CYS A 156 -131.67 42.70 REMARK 500 THR A 175 -143.80 -102.05 REMARK 500 SER A 177 -82.18 -119.63 REMARK 500 ASN A 180 77.98 53.63 REMARK 500 ILE A 211 0.62 -152.46 REMARK 500 THR B 175 -141.70 -115.07 REMARK 500 GLU B 176 -70.87 -60.03 REMARK 500 ASN B 180 72.18 42.75 REMARK 500 HIS B 208 -5.07 97.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 578 DISTANCE = 6.09 ANGSTROMS REMARK 525 HOH A 579 DISTANCE = 7.00 ANGSTROMS REMARK 525 HOH A 580 DISTANCE = 7.08 ANGSTROMS REMARK 525 HOH B 577 DISTANCE = 6.03 ANGSTROMS REMARK 525 HOH B 578 DISTANCE = 6.16 ANGSTROMS REMARK 525 HOH B 579 DISTANCE = 6.17 ANGSTROMS REMARK 525 HOH B 580 DISTANCE = 6.25 ANGSTROMS REMARK 525 HOH B 581 DISTANCE = 6.92 ANGSTROMS REMARK 525 HOH B 582 DISTANCE = 7.59 ANGSTROMS REMARK 525 HOH B 583 DISTANCE = 8.14 ANGSTROMS DBREF 8GX2 A -112 220 UNP P07711 CATL1_HUMAN 1 333 DBREF 8GX2 B -112 220 UNP P07711 CATL1_HUMAN 1 333 SEQRES 1 A 333 MET ASN PRO THR LEU ILE LEU ALA ALA PHE CYS LEU GLY SEQRES 2 A 333 ILE ALA SER ALA THR LEU THR PHE ASP HIS SER LEU GLU SEQRES 3 A 333 ALA GLN TRP THR LYS TRP LYS ALA MET HIS ASN ARG LEU SEQRES 4 A 333 TYR GLY MET ASN GLU GLU GLY TRP ARG ARG ALA VAL TRP SEQRES 5 A 333 GLU LYS ASN MET LYS MET ILE GLU LEU HIS ASN GLN GLU SEQRES 6 A 333 TYR ARG GLU GLY LYS HIS SER PHE THR MET ALA MET ASN SEQRES 7 A 333 ALA PHE GLY ASP MET THR SER GLU GLU PHE ARG GLN VAL SEQRES 8 A 333 MET ASN GLY PHE GLN ASN ARG LYS PRO ARG LYS GLY LYS SEQRES 9 A 333 VAL PHE GLN GLU PRO LEU PHE TYR GLU ALA PRO ARG SER SEQRES 10 A 333 VAL ASP TRP ARG GLU LYS GLY TYR VAL THR PRO VAL LYS SEQRES 11 A 333 ASN GLN GLY GLN CYS GLY SER CYS TRP ALA PHE SER ALA SEQRES 12 A 333 THR GLY ALA LEU GLU GLY GLN MET PHE ARG LYS THR GLY SEQRES 13 A 333 ARG LEU ILE SER LEU SER GLU GLN ASN LEU VAL ASP CYS SEQRES 14 A 333 SER GLY PRO GLN GLY ASN GLU GLY CYS ASN GLY GLY LEU SEQRES 15 A 333 MET ASP TYR ALA PHE GLN TYR VAL GLN ASP ASN GLY GLY SEQRES 16 A 333 LEU ASP SER GLU GLU SER TYR PRO TYR GLU ALA THR GLU SEQRES 17 A 333 GLU SER CYS LYS TYR ASN PRO LYS TYR SER VAL ALA ASN SEQRES 18 A 333 ASP THR GLY PHE VAL ASP ILE PRO LYS GLN GLU LYS ALA SEQRES 19 A 333 LEU MET LYS ALA VAL ALA THR VAL GLY PRO ILE SER VAL SEQRES 20 A 333 ALA ILE ASP ALA GLY HIS GLU SER PHE LEU PHE TYR LYS SEQRES 21 A 333 GLU GLY ILE TYR PHE GLU PRO ASP CYS SER SER GLU ASP SEQRES 22 A 333 MET ASP HIS GLY VAL LEU VAL VAL GLY TYR GLY PHE GLU SEQRES 23 A 333 SER THR GLU SER ASP ASN ASN LYS TYR TRP LEU VAL LYS SEQRES 24 A 333 ASN SER TRP GLY GLU GLU TRP GLY MET GLY GLY TYR VAL SEQRES 25 A 333 LYS MET ALA LYS ASP ARG ARG ASN HIS CYS GLY ILE ALA SEQRES 26 A 333 SER ALA ALA SER TYR PRO THR VAL SEQRES 1 B 333 MET ASN PRO THR LEU ILE LEU ALA ALA PHE CYS LEU GLY SEQRES 2 B 333 ILE ALA SER ALA THR LEU THR PHE ASP HIS SER LEU GLU SEQRES 3 B 333 ALA GLN TRP THR LYS TRP LYS ALA MET HIS ASN ARG LEU SEQRES 4 B 333 TYR GLY MET ASN GLU GLU GLY TRP ARG ARG ALA VAL TRP SEQRES 5 B 333 GLU LYS ASN MET LYS MET ILE GLU LEU HIS ASN GLN GLU SEQRES 6 B 333 TYR ARG GLU GLY LYS HIS SER PHE THR MET ALA MET ASN SEQRES 7 B 333 ALA PHE GLY ASP MET THR SER GLU GLU PHE ARG GLN VAL SEQRES 8 B 333 MET ASN GLY PHE GLN ASN ARG LYS PRO ARG LYS GLY LYS SEQRES 9 B 333 VAL PHE GLN GLU PRO LEU PHE TYR GLU ALA PRO ARG SER SEQRES 10 B 333 VAL ASP TRP ARG GLU LYS GLY TYR VAL THR PRO VAL LYS SEQRES 11 B 333 ASN GLN GLY GLN CYS GLY SER CYS TRP ALA PHE SER ALA SEQRES 12 B 333 THR GLY ALA LEU GLU GLY GLN MET PHE ARG LYS THR GLY SEQRES 13 B 333 ARG LEU ILE SER LEU SER GLU GLN ASN LEU VAL ASP CYS SEQRES 14 B 333 SER GLY PRO GLN GLY ASN GLU GLY CYS ASN GLY GLY LEU SEQRES 15 B 333 MET ASP TYR ALA PHE GLN TYR VAL GLN ASP ASN GLY GLY SEQRES 16 B 333 LEU ASP SER GLU GLU SER TYR PRO TYR GLU ALA THR GLU SEQRES 17 B 333 GLU SER CYS LYS TYR ASN PRO LYS TYR SER VAL ALA ASN SEQRES 18 B 333 ASP THR GLY PHE VAL ASP ILE PRO LYS GLN GLU LYS ALA SEQRES 19 B 333 LEU MET LYS ALA VAL ALA THR VAL GLY PRO ILE SER VAL SEQRES 20 B 333 ALA ILE ASP ALA GLY HIS GLU SER PHE LEU PHE TYR LYS SEQRES 21 B 333 GLU GLY ILE TYR PHE GLU PRO ASP CYS SER SER GLU ASP SEQRES 22 B 333 MET ASP HIS GLY VAL LEU VAL VAL GLY TYR GLY PHE GLU SEQRES 23 B 333 SER THR GLU SER ASP ASN ASN LYS TYR TRP LEU VAL LYS SEQRES 24 B 333 ASN SER TRP GLY GLU GLU TRP GLY MET GLY GLY TYR VAL SEQRES 25 B 333 LYS MET ALA LYS ASP ARG ARG ASN HIS CYS GLY ILE ALA SEQRES 26 B 333 SER ALA ALA SER TYR PRO THR VAL HET DMS A 301 4 HET KJ0 A 302 40 HET DMS A 303 4 HET DMS B 301 4 HET KJ0 B 302 40 HETNAM DMS DIMETHYL SULFOXIDE HETNAM KJ0 N-[(2S)-3-CYCLOHEXYL-1-[[(2S,3S)-4-(CYCLOPROPYLAMINO)- HETNAM 2 KJ0 3-OXIDANYL-4-OXIDANYLIDENE-1-[(3S)-2- HETNAM 3 KJ0 OXIDANYLIDENEPIPERIDIN-3-YL]BUTAN-2-YL]AMINO]-1- HETNAM 4 KJ0 OXIDANYLIDENE-PROPAN-2-YL]-1-BENZOFURAN-2-CARBOXAMIDE FORMUL 3 DMS 3(C2 H6 O S) FORMUL 4 KJ0 2(C30 H40 N4 O6) FORMUL 8 HOH *363(H2 O) HELIX 1 AA1 ARG A 8 GLY A 11 5 4 HELIX 2 AA2 SER A 24 GLY A 43 1 20 HELIX 3 AA3 SER A 49 SER A 57 1 9 HELIX 4 AA4 GLY A 58 GLY A 61 5 4 HELIX 5 AA5 GLU A 63 GLY A 67 5 5 HELIX 6 AA6 LEU A 69 GLY A 81 1 13 HELIX 7 AA7 ASN A 101 LYS A 103 5 3 HELIX 8 AA8 GLN A 118 VAL A 129 1 12 HELIX 9 AA9 HIS A 140 PHE A 145 1 6 HELIX 10 AB1 ARG B 8 GLY B 11 5 4 HELIX 11 AB2 SER B 24 GLY B 43 1 20 HELIX 12 AB3 SER B 49 SER B 57 1 9 HELIX 13 AB4 GLY B 58 GLY B 61 5 4 HELIX 14 AB5 GLU B 63 GLY B 67 5 5 HELIX 15 AB6 LEU B 69 GLY B 81 1 13 HELIX 16 AB7 ASN B 101 LYS B 103 5 3 HELIX 17 AB8 GLN B 118 VAL B 129 1 12 HELIX 18 AB9 HIS B 140 PHE B 145 1 6 SHEET 1 AA1 3 VAL A 5 ASP A 6 0 SHEET 2 AA1 3 HIS A 163 PHE A 172 -1 O TYR A 170 N VAL A 5 SHEET 3 AA1 3 ILE A 132 ILE A 136 -1 N ILE A 132 O VAL A 167 SHEET 1 AA2 5 VAL A 5 ASP A 6 0 SHEET 2 AA2 5 HIS A 163 PHE A 172 -1 O TYR A 170 N VAL A 5 SHEET 3 AA2 5 LYS A 181 LYS A 186 -1 O LYS A 186 N LEU A 166 SHEET 4 AA2 5 TYR A 198 ALA A 202 -1 O MET A 201 N TRP A 183 SHEET 5 AA2 5 ILE A 150 TYR A 151 1 N TYR A 151 O LYS A 200 SHEET 1 AA3 2 LEU A 83 ASP A 84 0 SHEET 2 AA3 2 SER A 105 ALA A 107 -1 O VAL A 106 N LEU A 83 SHEET 1 AA4 2 PHE A 112 ASP A 114 0 SHEET 2 AA4 2 SER A 216 PRO A 218 -1 O TYR A 217 N VAL A 113 SHEET 1 AA5 3 VAL B 5 ASP B 6 0 SHEET 2 AA5 3 HIS B 163 PHE B 172 -1 O TYR B 170 N VAL B 5 SHEET 3 AA5 3 ILE B 132 ILE B 136 -1 N ILE B 132 O VAL B 167 SHEET 1 AA6 5 VAL B 5 ASP B 6 0 SHEET 2 AA6 5 HIS B 163 PHE B 172 -1 O TYR B 170 N VAL B 5 SHEET 3 AA6 5 LYS B 181 LYS B 186 -1 O LYS B 186 N LEU B 166 SHEET 4 AA6 5 TYR B 198 ALA B 202 -1 O MET B 201 N TRP B 183 SHEET 5 AA6 5 ILE B 150 TYR B 151 1 N TYR B 151 O LYS B 200 SHEET 1 AA7 2 LEU B 83 ASP B 84 0 SHEET 2 AA7 2 SER B 105 ALA B 107 -1 O VAL B 106 N LEU B 83 SHEET 1 AA8 2 PHE B 112 ASP B 114 0 SHEET 2 AA8 2 SER B 216 PRO B 218 -1 O TYR B 217 N VAL B 113 SSBOND 1 CYS A 22 CYS A 65 1555 1555 2.03 SSBOND 2 CYS A 56 CYS A 98 1555 1555 2.05 SSBOND 3 CYS A 156 CYS A 209 1555 1555 2.06 SSBOND 4 CYS B 22 CYS B 65 1555 1555 2.03 SSBOND 5 CYS B 56 CYS B 98 1555 1555 2.05 SSBOND 6 CYS B 156 CYS B 209 1555 1555 2.05 LINK SG CYS A 25 C33 KJ0 A 302 1555 1555 1.83 LINK SG CYS B 25 C33 KJ0 B 302 1555 1555 1.83 CRYST1 57.760 76.270 109.020 90.00 90.00 90.00 P 2 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017313 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013111 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009173 0.00000