HEADER OXIDOREDUCTASE 19-SEP-22 8GXD TITLE L-LEUCINE DEHYDROGENASE FROM EXIGUOBACTERIUM SIBIRICUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLU/LEU/PHE/VAL DEHYDROGENASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.4.1.9; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: EXIGUOBACTERIUM SIBIRICUM (STRAIN DSM 17290 / SOURCE 3 CIP 109462 / JCM 13490 / 255-15); SOURCE 4 ORGANISM_TAXID: 262543; SOURCE 5 GENE: EXIG_0916; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS L-LEUCINE DEHYDROGENASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR X.MU,Y.NIE,T.WU,Y.WANG,N.ZHANG,D.YIN,Y.XU REVDAT 2 08-NOV-23 8GXD 1 REMARK REVDAT 1 26-APR-23 8GXD 0 JRNL AUTH T.WU,Y.WANG,N.ZHANG,D.YIN,Y.XU,Y.NIE,X.MU JRNL TITL RESHAPING SUBSTRATE-BINDING POCKET OF LEUCINE DEHYDROGENASE JRNL TITL 2 FOR BIDIRECTIONALLY ACCESSING STRUCTURALLY DIVERSE JRNL TITL 3 SUBSTRATES JRNL REF ACS CATALYSIS V. 13 158 2023 JRNL REFN ESSN 2155-5435 JRNL DOI 10.1021/ACSCATAL.2C04735 REMARK 2 REMARK 2 RESOLUTION. 3.02 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.02 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.62 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 14819 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 815 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.02 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1036 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.08 REMARK 3 BIN R VALUE (WORKING SET) : 0.3510 REMARK 3 BIN FREE R VALUE SET COUNT : 62 REMARK 3 BIN FREE R VALUE : 0.4370 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2786 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 22 REMARK 3 SOLVENT ATOMS : 31 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.77000 REMARK 3 B22 (A**2) : -1.77000 REMARK 3 B33 (A**2) : 3.53000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.595 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.344 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.266 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 15.959 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.917 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.871 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; NULL ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 8GXD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 26-SEP-22. REMARK 100 THE DEPOSITION ID IS D_1300032225. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-SEP-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : SEALED TUBE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER D8 QUEST REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : BRUKER PHOTON II REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15638 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.020 REMARK 200 RESOLUTION RANGE LOW (A) : 47.620 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.02 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.20 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 6ACF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 74.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M CALCIUM CHLORIDE, 0.1M SODIUM REMARK 280 ACETATE BUFFER (PH 4.6), 20% GLYCEROL (W/V), VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 76.49500 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 76.49500 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 66.01000 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 76.49500 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 76.49500 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 66.01000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 76.49500 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 76.49500 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 66.01000 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 76.49500 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 76.49500 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 66.01000 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 76.49500 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 76.49500 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 66.01000 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 76.49500 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 76.49500 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 66.01000 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 76.49500 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 76.49500 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 66.01000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 76.49500 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 76.49500 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 66.01000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 O2 GOL A 401 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 GLU A 3 REMARK 465 THR A 4 REMARK 465 ASN A 5 REMARK 465 VAL A 6 REMARK 465 GLU A 7 REMARK 465 ALA A 8 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 20 70.83 63.54 REMARK 500 LYS A 30 -71.81 -54.26 REMARK 500 ASN A 84 55.16 -90.48 REMARK 500 ASP A 124 -132.55 -137.43 REMARK 500 PHE A 141 52.98 -91.03 REMARK 500 PRO A 232 -37.81 -36.51 REMARK 500 VAL A 238 154.43 -46.35 REMARK 500 ALA A 247 -98.74 -89.00 REMARK 500 ALA A 266 83.51 -163.87 REMARK 500 GLN A 283 -70.12 -57.86 REMARK 500 GLU A 320 -35.15 -37.04 REMARK 500 REMARK 500 REMARK: NULL DBREF 8GXD A 1 374 UNP B1YLR3 B1YLR3_EXIS2 1 374 SEQRES 1 A 374 MET VAL GLU THR ASN VAL GLU ALA ARG PHE SER ILE PHE SEQRES 2 A 374 GLU THR MET ALA MET GLU ASP TYR GLU GLN VAL VAL PHE SEQRES 3 A 374 CYS HIS ASP LYS VAL SER GLY LEU LYS ALA ILE ILE ALA SEQRES 4 A 374 ILE HIS ASP THR THR LEU GLY PRO ALA LEU GLY GLY LEU SEQRES 5 A 374 ARG MET TRP ASN TYR ALA SER ASP GLU GLU ALA LEU ILE SEQRES 6 A 374 ASP ALA LEU ARG LEU ALA LYS GLY MET THR TYR LYS ASN SEQRES 7 A 374 ALA ALA ALA GLY LEU ASN LEU GLY GLY GLY LYS ALA VAL SEQRES 8 A 374 ILE ILE GLY ASP ALA LYS THR GLN LYS SER GLU ALA LEU SEQRES 9 A 374 PHE ARG ALA PHE GLY ARG TYR VAL GLN SER LEU ASN GLY SEQRES 10 A 374 ARG TYR ILE THR ALA GLU ASP VAL ASN THR THR VAL ALA SEQRES 11 A 374 ASP MET ASP TYR ILE HIS MET GLU THR ASP PHE VAL THR SEQRES 12 A 374 GLY VAL SER PRO ALA PHE GLY SER SER GLY ASN PRO SER SEQRES 13 A 374 PRO VAL THR ALA TYR GLY VAL TYR ARG GLY MET LYS ALA SEQRES 14 A 374 ALA ALA LYS GLU VAL TYR GLY THR ASP SER LEU GLY GLY SEQRES 15 A 374 LYS THR VAL ALA ILE GLN GLY VAL GLY ASN VAL ALA PHE SEQRES 16 A 374 ASN LEU CYS ARG HIS LEU HIS GLU GLU GLY ALA LYS LEU SEQRES 17 A 374 ILE VAL THR ASP ILE ASN GLN ASP ALA LEU ARG ARG ALA SEQRES 18 A 374 GLU GLU ALA PHE GLY ALA LEU VAL VAL GLY PRO ASP GLU SEQRES 19 A 374 ILE TYR SER VAL ASP ALA ASP ILE PHE ALA PRO CYS ALA SEQRES 20 A 374 LEU GLY ALA THR LEU ASN ASP GLU THR ILE PRO GLN LEU SEQRES 21 A 374 LYS VAL LYS ILE ILE ALA GLY ALA ALA ASN ASN GLN LEU SEQRES 22 A 374 LYS GLU ASP ARG HIS GLY ASP MET LEU GLN GLU ARG GLY SEQRES 23 A 374 ILE LEU TYR THR PRO ASP PHE VAL ILE ASN ALA GLY GLY SEQRES 24 A 374 VAL ILE ASN VAL ALA ASP GLU LEU ASP GLY TYR ASN ARG SEQRES 25 A 374 GLU ARG ALA MET LYS LYS VAL GLU LEU VAL TYR ASP ALA SEQRES 26 A 374 VAL ALA LYS VAL ILE GLU ILE ALA LYS ARG ASP HIS LEU SEQRES 27 A 374 PRO THR TYR ARG ALA ALA GLU LYS MET ALA GLU GLU ARG SEQRES 28 A 374 ILE ALA THR MET GLY SER ALA ARG SER GLN PHE LEU ARG SEQRES 29 A 374 ARG ASP LYS ASN ILE LEU GLY SER ARG GLY HET GOL A 401 6 HET GOL A 402 6 HET GOL A 403 6 HET CA A 404 1 HET CA A 405 1 HET CA A 406 1 HET CA A 407 1 HETNAM GOL GLYCEROL HETNAM CA CALCIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL 3(C3 H8 O3) FORMUL 5 CA 4(CA 2+) FORMUL 9 HOH *31(H2 O) HELIX 1 AA1 SER A 11 ASP A 20 1 10 HELIX 2 AA2 SER A 59 ALA A 81 1 23 HELIX 3 AA3 SER A 101 SER A 114 1 14 HELIX 4 AA4 THR A 128 MET A 137 1 10 HELIX 5 AA5 SER A 146 GLY A 153 1 8 HELIX 6 AA6 PRO A 155 GLY A 176 1 22 HELIX 7 AA7 GLY A 191 GLU A 204 1 14 HELIX 8 AA8 ASN A 214 GLY A 226 1 13 HELIX 9 AA9 THR A 256 LEU A 260 5 5 HELIX 10 AB1 ASP A 276 ARG A 285 1 10 HELIX 11 AB2 PRO A 291 ASN A 296 1 6 HELIX 12 AB3 ALA A 297 LEU A 307 1 11 HELIX 13 AB4 ASN A 311 GLU A 320 1 10 HELIX 14 AB5 LEU A 321 ASP A 336 1 16 HELIX 15 AB6 PRO A 339 ARG A 359 1 21 SHEET 1 AA1 4 GLN A 23 ASP A 29 0 SHEET 2 AA1 4 LEU A 34 ASP A 42 -1 O ILE A 38 N VAL A 25 SHEET 3 AA1 4 GLY A 86 ILE A 93 -1 O GLY A 87 N HIS A 41 SHEET 4 AA1 4 LEU A 52 TRP A 55 1 N TRP A 55 O ILE A 92 SHEET 1 AA2 5 GLN A 23 ASP A 29 0 SHEET 2 AA2 5 LEU A 34 ASP A 42 -1 O ILE A 38 N VAL A 25 SHEET 3 AA2 5 GLY A 86 ILE A 93 -1 O GLY A 87 N HIS A 41 SHEET 4 AA2 5 ALA A 48 LEU A 49 1 N LEU A 49 O GLY A 86 SHEET 5 AA2 5 TYR A 119 ILE A 120 1 O ILE A 120 N ALA A 48 SHEET 1 AA3 6 LEU A 228 VAL A 229 0 SHEET 2 AA3 6 LYS A 207 THR A 211 1 N VAL A 210 O LEU A 228 SHEET 3 AA3 6 THR A 184 GLN A 188 1 N ILE A 187 O ILE A 209 SHEET 4 AA3 6 ILE A 242 PRO A 245 1 O ALA A 244 N ALA A 186 SHEET 5 AA3 6 ILE A 264 ILE A 265 1 O ILE A 264 N PHE A 243 SHEET 6 AA3 6 LEU A 288 TYR A 289 1 O LEU A 288 N ILE A 265 CRYST1 152.990 152.990 132.020 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006536 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006536 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007575 0.00000 TER 2787 GLY A 374 HETATM 2788 C1 GOL A 401 34.288 34.708 1.284 0.50 61.07 C HETATM 2789 O1 GOL A 401 34.254 35.793 2.207 0.50 59.19 O HETATM 2790 C2 GOL A 401 34.737 35.161 -0.089 0.50 62.13 C HETATM 2791 O2 GOL A 401 35.936 35.930 0.022 0.50 62.51 O HETATM 2792 C3 GOL A 401 34.953 34.011 -1.050 0.50 61.11 C HETATM 2793 O3 GOL A 401 35.211 34.476 -2.371 0.50 59.86 O HETATM 2794 C1 GOL A 402 39.961 21.409 14.930 1.00 66.36 C HETATM 2795 O1 GOL A 402 40.663 22.324 15.765 1.00 61.95 O HETATM 2796 C2 GOL A 402 39.998 20.005 15.498 1.00 68.81 C HETATM 2797 O2 GOL A 402 39.670 20.040 16.890 1.00 68.66 O HETATM 2798 C3 GOL A 402 39.084 19.043 14.764 1.00 65.37 C HETATM 2799 O3 GOL A 402 39.191 17.725 15.291 1.00 62.45 O HETATM 2800 C1 GOL A 403 30.666 -0.269 19.380 1.00 66.59 C HETATM 2801 O1 GOL A 403 30.169 0.615 20.383 1.00 65.02 O HETATM 2802 C2 GOL A 403 32.101 0.054 19.008 1.00 68.23 C HETATM 2803 O2 GOL A 403 32.982 -0.315 20.072 1.00 69.30 O HETATM 2804 C3 GOL A 403 32.546 -0.616 17.724 1.00 66.60 C HETATM 2805 O3 GOL A 403 33.676 0.039 17.148 1.00 65.09 O HETATM 2806 CA CA A 404 10.362 31.093 0.854 1.00 30.83 CA HETATM 2807 CA CA A 405 14.454 37.882 4.746 1.00 51.77 CA HETATM 2808 CA CA A 406 26.668 15.989 23.650 1.00 57.70 CA HETATM 2809 CA CA A 407 36.351 14.925 15.521 1.00 44.54 CA HETATM 2810 O HOH A 501 6.736 15.057 24.581 1.00 26.32 O HETATM 2811 O HOH A 502 39.068 13.915 20.766 1.00 12.18 O HETATM 2812 O HOH A 503 5.774 32.485 13.132 1.00 28.14 O HETATM 2813 O HOH A 504 12.513 12.446 32.491 1.00 29.95 O HETATM 2814 O HOH A 505 51.549 21.735 38.375 1.00 34.24 O HETATM 2815 O HOH A 506 32.242 -1.235 0.656 1.00 16.17 O HETATM 2816 O HOH A 507 38.171 18.909 19.934 1.00 25.15 O HETATM 2817 O HOH A 508 24.033 16.610 18.343 1.00 19.05 O HETATM 2818 O HOH A 509 21.920 2.510 16.231 1.00 22.10 O HETATM 2819 O HOH A 510 39.369 14.486 17.795 1.00 20.67 O HETATM 2820 O HOH A 511 27.536 25.528 34.131 1.00 17.45 O HETATM 2821 O HOH A 512 30.007 36.156 5.198 1.00 29.49 O HETATM 2822 O HOH A 513 47.032 20.394 15.697 1.00 35.14 O HETATM 2823 O HOH A 514 29.946 35.125 16.461 1.00 32.40 O HETATM 2824 O HOH A 515 12.026 28.247 22.907 1.00 17.81 O HETATM 2825 O HOH A 516 4.991 18.145 17.793 1.00 16.17 O HETATM 2826 O HOH A 517 29.745 9.185 50.657 1.00 38.88 O HETATM 2827 O HOH A 518 5.045 15.921 19.851 1.00 20.27 O HETATM 2828 O HOH A 519 27.896 27.272 18.443 1.00 20.80 O HETATM 2829 O HOH A 520 31.295 23.075 20.466 1.00 8.18 O HETATM 2830 O HOH A 521 25.888 26.444 35.610 1.00 18.84 O HETATM 2831 O HOH A 522 30.333 1.430 1.701 1.00 18.80 O HETATM 2832 O HOH A 523 10.693 8.196 11.528 1.00 16.08 O HETATM 2833 O HOH A 524 53.765 17.705 26.470 1.00 30.50 O HETATM 2834 O HOH A 525 52.846 20.216 37.242 1.00 16.93 O HETATM 2835 O HOH A 526 2.907 11.735 9.437 1.00 19.74 O HETATM 2836 O HOH A 527 30.024 28.530 18.460 1.00 18.73 O HETATM 2837 O HOH A 528 11.293 7.336 14.013 1.00 11.71 O HETATM 2838 O HOH A 529 36.899 18.932 12.261 1.00 36.99 O HETATM 2839 O HOH A 530 22.556 15.606 21.147 1.00 24.40 O HETATM 2840 O HOH A 531 37.960 21.200 12.342 1.00 44.90 O CONECT 2788 2789 2790 CONECT 2789 2788 CONECT 2790 2788 2791 2792 CONECT 2791 2790 CONECT 2792 2790 2793 CONECT 2793 2792 CONECT 2794 2795 2796 CONECT 2795 2794 CONECT 2796 2794 2797 2798 CONECT 2797 2796 CONECT 2798 2796 2799 CONECT 2799 2798 CONECT 2800 2801 2802 CONECT 2801 2800 CONECT 2802 2800 2803 2804 CONECT 2803 2802 CONECT 2804 2802 2805 CONECT 2805 2804 MASTER 334 0 7 15 15 0 0 6 2839 1 18 29 END