HEADER PROTEIN BINDING/ HYDROLASE 19-SEP-22 8GXE TITLE PTPN21 FERM PTP COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 21; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PTPN21 PTP DOMAIN; COMPND 5 SYNONYM: PROTEIN-TYROSINE PHOSPHATASE D1; COMPND 6 EC: 3.1.3.48; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 21; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: PTPN21 FERM DOMAIN; COMPND 12 SYNONYM: PROTEIN-TYROSINE PHOSPHATASE D1; COMPND 13 EC: 3.1.3.48; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PTPN21, PTPD1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: PTPN21, PTPD1; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PTPN21, FERM, PHOSPHOTASE DOMAIN, PTP, PTPD1, HYDROLASE, PROTEIN KEYWDS 2 BINDING- HYDROLASE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR L.CHEN,Y.Y.ZHENG,C.ZHOU REVDAT 2 17-APR-24 8GXE 1 JRNL REVDAT 1 27-SEP-23 8GXE 0 JRNL AUTH L.CHEN,Z.QIAN,Y.ZHENG,J.ZHANG,J.SUN,C.ZHOU,H.XIAO JRNL TITL STRUCTURAL ANALYSIS OF PTPN21 REVEALS A DOMINANT-NEGATIVE JRNL TITL 2 EFFECT OF THE FERM DOMAIN ON ITS PHOSPHATASE ACTIVITY. JRNL REF SCI ADV V. 10 I7404 2024 JRNL REFN ESSN 2375-2548 JRNL PMID 38416831 JRNL DOI 10.1126/SCIADV.ADI7404 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20RC1_4392 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.84 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 37344 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.220 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1896 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.8400 - 7.2200 0.99 2515 149 0.1844 0.2051 REMARK 3 2 7.2200 - 5.7400 1.00 2550 138 0.2351 0.3444 REMARK 3 3 5.7400 - 5.0100 1.00 2556 120 0.1963 0.2285 REMARK 3 4 5.0100 - 4.5500 1.00 2516 145 0.1745 0.2363 REMARK 3 5 4.5500 - 4.2300 1.00 2587 113 0.1764 0.2325 REMARK 3 6 4.2300 - 3.9800 1.00 2492 149 0.1853 0.2231 REMARK 3 7 3.9800 - 3.7800 1.00 2582 115 0.2103 0.2571 REMARK 3 8 3.7800 - 3.6200 1.00 2523 136 0.2193 0.2764 REMARK 3 9 3.6200 - 3.4800 1.00 2516 176 0.2401 0.2707 REMARK 3 10 3.4800 - 3.3600 1.00 2531 112 0.2686 0.3031 REMARK 3 11 3.3600 - 3.2500 1.00 2518 143 0.2641 0.3208 REMARK 3 12 3.2500 - 3.1600 1.00 2494 141 0.2962 0.3818 REMARK 3 13 3.1600 - 3.0800 0.99 2574 126 0.3046 0.3334 REMARK 3 14 3.0700 - 3.0000 0.99 2494 133 0.3442 0.3453 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.320 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 91.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 878 THROUGH 912 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.3754 -49.9158 18.5525 REMARK 3 T TENSOR REMARK 3 T11: 0.3816 T22: 1.0838 REMARK 3 T33: 0.3492 T12: -0.0489 REMARK 3 T13: 0.0741 T23: -0.0034 REMARK 3 L TENSOR REMARK 3 L11: 6.0142 L22: 5.0259 REMARK 3 L33: 4.6946 L12: -0.8553 REMARK 3 L13: 1.3695 L23: -1.7361 REMARK 3 S TENSOR REMARK 3 S11: 0.0881 S12: 0.6297 S13: 0.3936 REMARK 3 S21: -0.4003 S22: -0.0904 S23: -0.8480 REMARK 3 S31: 0.1698 S32: 1.1892 S33: 0.0398 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 913 THROUGH 987 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.7057 -41.7941 12.6397 REMARK 3 T TENSOR REMARK 3 T11: 0.2993 T22: 0.4173 REMARK 3 T33: 0.3091 T12: 0.0024 REMARK 3 T13: -0.0151 T23: 0.0372 REMARK 3 L TENSOR REMARK 3 L11: 5.0121 L22: 5.7051 REMARK 3 L33: 5.8627 L12: 1.2903 REMARK 3 L13: -0.6640 L23: -0.0063 REMARK 3 S TENSOR REMARK 3 S11: 0.1096 S12: 0.5558 S13: 0.7590 REMARK 3 S21: -0.3108 S22: 0.0323 S23: 0.2031 REMARK 3 S31: -0.1854 S32: -0.1589 S33: -0.1505 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 988 THROUGH 1073 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.7748 -57.6220 19.2095 REMARK 3 T TENSOR REMARK 3 T11: 0.3008 T22: 0.3460 REMARK 3 T33: 0.2167 T12: 0.0257 REMARK 3 T13: 0.0509 T23: 0.0209 REMARK 3 L TENSOR REMARK 3 L11: 5.7153 L22: 3.7674 REMARK 3 L33: 5.6987 L12: 0.2243 REMARK 3 L13: -1.0018 L23: 0.5872 REMARK 3 S TENSOR REMARK 3 S11: 0.0992 S12: -0.0042 S13: -0.1382 REMARK 3 S21: -0.0762 S22: -0.0278 S23: 0.1836 REMARK 3 S31: 0.1257 S32: -0.1354 S33: 0.0066 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1074 THROUGH 1171 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.5308 -56.1004 14.4255 REMARK 3 T TENSOR REMARK 3 T11: 0.3605 T22: 0.6521 REMARK 3 T33: 0.1950 T12: 0.0556 REMARK 3 T13: 0.0102 T23: 0.0123 REMARK 3 L TENSOR REMARK 3 L11: 4.9809 L22: 4.1832 REMARK 3 L33: 2.3281 L12: 0.1404 REMARK 3 L13: -1.1908 L23: -0.3710 REMARK 3 S TENSOR REMARK 3 S11: 0.0838 S12: 0.3201 S13: 0.0464 REMARK 3 S21: -0.6483 S22: -0.1055 S23: -0.1386 REMARK 3 S31: 0.1563 S32: 0.5962 S33: -0.0387 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 20 THROUGH 130 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.1202 -81.7029 10.8446 REMARK 3 T TENSOR REMARK 3 T11: 0.7357 T22: 0.5080 REMARK 3 T33: 0.9859 T12: 0.1284 REMARK 3 T13: -0.2036 T23: -0.2036 REMARK 3 L TENSOR REMARK 3 L11: 1.1849 L22: 5.2382 REMARK 3 L33: 3.2554 L12: 0.3329 REMARK 3 L13: 0.5938 L23: 1.4706 REMARK 3 S TENSOR REMARK 3 S11: 0.0895 S12: 0.7235 S13: -1.1056 REMARK 3 S21: -0.3712 S22: -0.4269 S23: 1.0386 REMARK 3 S31: 0.5704 S32: -0.0499 S33: 0.2459 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 131 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.5382 -98.8756 9.0190 REMARK 3 T TENSOR REMARK 3 T11: 1.2000 T22: 1.1870 REMARK 3 T33: 1.5557 T12: 0.3765 REMARK 3 T13: -0.1828 T23: -0.1766 REMARK 3 L TENSOR REMARK 3 L11: 1.0356 L22: 3.1390 REMARK 3 L33: 2.9400 L12: -0.8374 REMARK 3 L13: -0.4209 L23: -1.7841 REMARK 3 S TENSOR REMARK 3 S11: 0.3118 S12: -0.1248 S13: -1.1238 REMARK 3 S21: -0.2880 S22: -0.3156 S23: -0.6824 REMARK 3 S31: 1.0773 S32: 1.3946 S33: -0.0005 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 214 THROUGH 286 ) REMARK 3 ORIGIN FOR THE GROUP (A): -46.9887 -99.1333 -1.3282 REMARK 3 T TENSOR REMARK 3 T11: 1.5554 T22: 0.8058 REMARK 3 T33: 2.1648 T12: 0.0102 REMARK 3 T13: -0.4979 T23: -0.3884 REMARK 3 L TENSOR REMARK 3 L11: 2.5971 L22: 1.6716 REMARK 3 L33: 3.3751 L12: -0.5818 REMARK 3 L13: 0.7477 L23: 0.1400 REMARK 3 S TENSOR REMARK 3 S11: -0.0553 S12: 0.3149 S13: -0.9122 REMARK 3 S21: -1.3136 S22: -0.4904 S23: 1.3979 REMARK 3 S31: 1.1383 S32: -0.9993 S33: 0.4216 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 287 THROUGH 307 ) REMARK 3 ORIGIN FOR THE GROUP (A): -44.9532 -87.0633 -1.2767 REMARK 3 T TENSOR REMARK 3 T11: 1.3600 T22: 0.7835 REMARK 3 T33: 1.9742 T12: 0.3161 REMARK 3 T13: -0.8201 T23: -0.5652 REMARK 3 L TENSOR REMARK 3 L11: 1.7160 L22: 7.3659 REMARK 3 L33: 1.0203 L12: 1.3240 REMARK 3 L13: -0.1333 L23: -0.2612 REMARK 3 S TENSOR REMARK 3 S11: 0.2251 S12: 0.2135 S13: 0.3490 REMARK 3 S21: -1.0321 S22: -0.5268 S23: 1.7344 REMARK 3 S31: -0.2209 S32: -0.5319 S33: 0.0634 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8GXE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 26-SEP-22. REMARK 100 THE DEPOSITION ID IS D_1300032394. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JAN-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9785 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37344 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 47.840 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 13.30 REMARK 200 R MERGE (I) : 0.28930 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.8900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.58300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2BZL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEGMME 2000, HEPES PH 7.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.52500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 58.52500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 36.15650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 114.12300 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 36.15650 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 114.12300 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 58.52500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 36.15650 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 114.12300 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 58.52500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 36.15650 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 114.12300 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 1098 REMARK 465 SER A 1099 REMARK 465 ARG A 1172 REMARK 465 LEU A 1173 REMARK 465 ILE A 1174 REMARK 465 SER B 18 REMARK 465 SER B 19 REMARK 465 TYR B 158 REMARK 465 GLU B 159 REMARK 465 SER B 160 REMARK 465 GLN B 161 REMARK 465 ASP B 162 REMARK 465 TRP B 174 REMARK 465 LEU B 175 REMARK 465 ARG B 255 REMARK 465 TRP B 256 REMARK 465 HIS B 257 REMARK 465 ALA B 274 REMARK 465 ASN B 275 REMARK 465 LYS B 276 REMARK 465 GLU B 277 REMARK 465 GLU B 278 REMARK 465 GLN B 308 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 897 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 71 CG CD CE NZ REMARK 470 LYS B 179 CG CD CE NZ REMARK 470 LYS B 194 CG CD CE NZ REMARK 470 ARG B 196 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 266 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 943 -166.08 -126.35 REMARK 500 SER A1108 -158.70 -129.49 REMARK 500 VAL A1112 -62.40 -129.01 REMARK 500 VAL A1151 97.76 59.79 REMARK 500 LYS A1169 43.63 -84.10 REMARK 500 GLU B 57 19.47 57.56 REMARK 500 PRO B 171 -175.28 -68.36 REMARK 500 GLN B 209 5.00 -69.84 REMARK 500 LYS B 266 -131.23 56.71 REMARK 500 THR B 284 -168.29 -120.12 REMARK 500 REMARK 500 REMARK: NULL DBREF 8GXE A 878 1174 UNP Q16825 PTN21_HUMAN 878 1174 DBREF 8GXE B 18 308 UNP Q16825 PTN21_HUMAN 18 308 SEQADV 8GXE SER A 1108 UNP Q16825 CYS 1108 ENGINEERED MUTATION SEQRES 1 A 297 ALA THR ASN ASP GLU ARG CYS LYS ILE LEU GLU GLN ARG SEQRES 2 A 297 LEU GLU GLN GLY MET VAL PHE THR GLU TYR GLU ARG ILE SEQRES 3 A 297 LEU LYS LYS ARG LEU VAL ASP GLY GLU CYS SER THR ALA SEQRES 4 A 297 ARG LEU PRO GLU ASN ALA GLU ARG ASN ARG PHE GLN ASP SEQRES 5 A 297 VAL LEU PRO TYR ASP ASP VAL ARG VAL GLU LEU VAL PRO SEQRES 6 A 297 THR LYS GLU ASN ASN THR GLY TYR ILE ASN ALA SER HIS SEQRES 7 A 297 ILE LYS VAL SER VAL SER GLY ILE GLU TRP ASP TYR ILE SEQRES 8 A 297 ALA THR GLN GLY PRO LEU GLN ASN THR CYS GLN ASP PHE SEQRES 9 A 297 TRP GLN MET VAL TRP GLU GLN GLY ILE ALA ILE ILE ALA SEQRES 10 A 297 MET VAL THR ALA GLU GLU GLU GLY GLY ARG GLU LYS SER SEQRES 11 A 297 PHE ARG TYR TRP PRO ARG LEU GLY SER ARG HIS ASN THR SEQRES 12 A 297 VAL THR TYR GLY ARG PHE LYS ILE THR THR ARG PHE ARG SEQRES 13 A 297 THR ASP SER GLY CYS TYR ALA THR THR GLY LEU LYS MET SEQRES 14 A 297 LYS HIS LEU LEU THR GLY GLN GLU ARG THR VAL TRP HIS SEQRES 15 A 297 LEU GLN TYR THR ASP TRP PRO GLU HIS GLY CYS PRO GLU SEQRES 16 A 297 ASP LEU LYS GLY PHE LEU SER TYR LEU GLU GLU ILE GLN SEQRES 17 A 297 SER VAL ARG ARG HIS THR ASN SER THR SER ASP PRO GLN SEQRES 18 A 297 SER PRO ASN PRO PRO LEU LEU VAL HIS SER SER ALA GLY SEQRES 19 A 297 VAL GLY ARG THR GLY VAL VAL ILE LEU SER GLU ILE MET SEQRES 20 A 297 ILE ALA CYS LEU GLU HIS ASN GLU VAL LEU ASP ILE PRO SEQRES 21 A 297 ARG VAL LEU ASP MET LEU ARG GLN GLN ARG MET MET LEU SEQRES 22 A 297 VAL GLN THR LEU CYS GLN TYR THR PHE VAL TYR ARG VAL SEQRES 23 A 297 LEU ILE GLN PHE LEU LYS SER SER ARG LEU ILE SEQRES 1 B 291 SER SER LYS SER CYS LEU VAL ALA ARG ILE GLN LEU LEU SEQRES 2 B 291 ASN ASN GLU PHE VAL GLU PHE THR LEU SER VAL GLU SER SEQRES 3 B 291 THR GLY GLN GLU SER LEU GLU ALA VAL ALA GLN ARG LEU SEQRES 4 B 291 GLU LEU ARG GLU VAL THR TYR PHE SER LEU TRP TYR TYR SEQRES 5 B 291 ASN LYS GLN ASN GLN ARG ARG TRP VAL ASP LEU GLU LYS SEQRES 6 B 291 PRO LEU LYS LYS GLN LEU ASP LYS TYR ALA LEU GLU PRO SEQRES 7 B 291 THR VAL TYR PHE GLY VAL VAL PHE TYR VAL PRO SER VAL SEQRES 8 B 291 SER GLN LEU GLN GLN GLU ILE THR ARG TYR GLN TYR TYR SEQRES 9 B 291 LEU GLN LEU LYS LYS ASP ILE LEU GLU GLY SER ILE PRO SEQRES 10 B 291 CYS THR LEU GLU GLN ALA ILE GLN LEU ALA GLY LEU ALA SEQRES 11 B 291 VAL GLN ALA ASP PHE GLY ASP PHE ASP GLN TYR GLU SER SEQRES 12 B 291 GLN ASP PHE LEU GLN LYS PHE ALA LEU PHE PRO VAL GLY SEQRES 13 B 291 TRP LEU GLN ASP GLU LYS VAL LEU GLU GLU ALA THR GLN SEQRES 14 B 291 LYS VAL ALA LEU LEU HIS GLN LYS TYR ARG GLY LEU THR SEQRES 15 B 291 ALA PRO ASP ALA GLU MET LEU TYR MET GLN GLU VAL GLU SEQRES 16 B 291 ARG MET ASP GLY TYR GLY GLU GLU SER TYR PRO ALA LYS SEQRES 17 B 291 ASP SER GLN GLY SER ASP ILE SER ILE GLY ALA CYS LEU SEQRES 18 B 291 GLU GLY ILE PHE VAL LYS HIS LYS ASN GLY ARG HIS PRO SEQRES 19 B 291 VAL VAL PHE ARG TRP HIS ASP ILE ALA ASN MET SER HIS SEQRES 20 B 291 ASN LYS SER PHE PHE ALA LEU GLU LEU ALA ASN LYS GLU SEQRES 21 B 291 GLU THR ILE GLN PHE GLN THR GLU ASP MET GLU THR ALA SEQRES 22 B 291 LYS TYR ILE TRP ARG LEU CYS VAL ALA ARG HIS LYS PHE SEQRES 23 B 291 TYR ARG LEU ASN GLN HET CL A1201 1 HETNAM CL CHLORIDE ION FORMUL 3 CL CL 1- FORMUL 4 HOH *16(H2 O) HELIX 1 AA1 THR A 879 GLN A 893 1 15 HELIX 2 AA2 GLY A 894 ARG A 902 1 9 HELIX 3 AA3 LEU A 918 GLU A 923 1 6 HELIX 4 AA4 THR A 977 GLN A 988 1 12 HELIX 5 AA5 ASP A 1073 SER A 1093 1 21 HELIX 6 AA6 VAL A 1112 HIS A 1130 1 19 HELIX 7 AA7 ASP A 1135 GLN A 1145 1 11 HELIX 8 AA8 THR A 1153 LYS A 1169 1 17 HELIX 9 AA9 THR B 44 LEU B 56 1 13 HELIX 10 AB1 GLU B 60 THR B 62 5 3 HELIX 11 AB2 PRO B 83 ALA B 92 1 10 HELIX 12 AB3 GLN B 113 GLU B 130 1 18 HELIX 13 AB4 THR B 136 PHE B 152 1 17 HELIX 14 AB5 ASP B 177 TYR B 195 1 19 HELIX 15 AB6 THR B 199 GLU B 212 1 14 HELIX 16 AB7 ASP B 286 LEU B 306 1 21 SHEET 1 AA1 9 ARG A 937 GLU A 939 0 SHEET 2 AA1 9 TYR A 950 VAL A 960 -1 O ALA A 953 N VAL A 938 SHEET 3 AA1 9 ILE A 963 GLN A 971 -1 O TYR A 967 N ILE A 956 SHEET 4 AA1 9 LEU A1104 SER A1108 1 O LEU A1104 N ILE A 968 SHEET 5 AA1 9 ILE A 992 MET A 995 1 N ALA A 994 O LEU A1105 SHEET 6 AA1 9 GLU A1054 TYR A1062 1 O LEU A1060 N MET A 995 SHEET 7 AA1 9 TYR A1039 HIS A1048 -1 N THR A1042 O HIS A1059 SHEET 8 AA1 9 PHE A1026 ASP A1035 -1 N ARG A1031 O GLY A1043 SHEET 9 AA1 9 THR A1020 TYR A1023 -1 N TYR A1023 O PHE A1026 SHEET 1 AA213 ARG A 937 GLU A 939 0 SHEET 2 AA213 TYR A 950 VAL A 960 -1 O ALA A 953 N VAL A 938 SHEET 3 AA213 ILE A 963 GLN A 971 -1 O TYR A 967 N ILE A 956 SHEET 4 AA213 LEU A1104 SER A1108 1 O LEU A1104 N ILE A 968 SHEET 5 AA213 ILE A 992 MET A 995 1 N ALA A 994 O LEU A1105 SHEET 6 AA213 GLU A1054 TYR A1062 1 O LEU A1060 N MET A 995 SHEET 7 AA213 TYR A1039 HIS A1048 -1 N THR A1042 O HIS A1059 SHEET 8 AA213 PHE A1026 ASP A1035 -1 N ARG A1031 O GLY A1043 SHEET 9 AA213 PHE B 34 SER B 40 -1 O THR B 38 N ARG A1033 SHEET 10 AA213 CYS B 22 GLN B 28 -1 N ALA B 25 O PHE B 37 SHEET 11 AA213 THR B 96 VAL B 101 1 O PHE B 99 N GLN B 28 SHEET 12 AA213 PHE B 64 TYR B 69 -1 N TRP B 67 O TYR B 98 SHEET 13 AA213 ARG B 75 TRP B 77 -1 O ARG B 76 N TYR B 68 SHEET 1 AA3 2 GLU A1000 GLU A1001 0 SHEET 2 AA3 2 ARG A1004 GLU A1005 -1 O ARG A1004 N GLU A1001 SHEET 1 AA4 4 TYR B 222 LYS B 225 0 SHEET 2 AA4 4 ASP B 231 ALA B 236 -1 O ILE B 232 N ALA B 224 SHEET 3 AA4 4 ILE B 241 HIS B 245 -1 O LYS B 244 N SER B 233 SHEET 4 AA4 4 VAL B 252 PHE B 254 -1 O VAL B 252 N VAL B 243 SHEET 1 AA5 3 ASN B 261 ASN B 265 0 SHEET 2 AA5 3 PHE B 268 GLU B 272 -1 O ALA B 270 N SER B 263 SHEET 3 AA5 3 ILE B 280 GLN B 283 -1 O PHE B 282 N PHE B 269 CRYST1 72.313 228.246 117.050 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013829 0.000000 0.000000 0.00000 SCALE2 0.000000 0.004381 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008543 0.00000