HEADER TRANSFERASE 20-SEP-22 8GXF TITLE PSEUDOMONAS FLEXIBILIS GCN5 FAMILY ACETYLTRANSFERASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GCN5 FAMILY ACETYLTRANSFERASE; COMPND 3 CHAIN: B, A, C, D; COMPND 4 SYNONYM: PROTEIN N-ACETYLTRANSFERASE,RIMJ/RIML FAMILY; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS FLEXIBILIS; SOURCE 3 ORGANISM_TAXID: 706570; SOURCE 4 GENE: PT85_02890, SAMN05421672_12249; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS COMPLEX WITH ACCOA, ACETYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.J.SONG,R.BAO REVDAT 3 08-NOV-23 8GXF 1 REMARK REVDAT 2 02-NOV-22 8GXF 1 JRNL REVDAT 1 19-OCT-22 8GXF 0 JRNL AUTH Y.SONG,S.ZHANG,Z.YE,Y.SONG,L.CHEN,A.TONG,Y.HE,R.BAO JRNL TITL THE NOVEL TYPE II TOXIN-ANTITOXIN PACTA MODULATES JRNL TITL 2 PSEUDOMONAS AERUGINOSA IRON HOMEOSTASIS BY OBSTRUCTING THE JRNL TITL 3 DNA-BINDING ACTIVITY OF FUR. JRNL REF NUCLEIC ACIDS RES. V. 50 10586 2022 JRNL REFN ESSN 1362-4962 JRNL PMID 36200834 JRNL DOI 10.1093/NAR/GKAC867 REMARK 2 REMARK 2 RESOLUTION. 3.04 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.04 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.95 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 30921 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.233 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.302 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3093 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.9500 - 8.5100 0.97 1235 137 0.2306 0.2673 REMARK 3 2 8.5100 - 6.7600 1.00 1288 141 0.2281 0.2737 REMARK 3 3 6.7600 - 5.9100 1.00 1264 146 0.2520 0.2908 REMARK 3 4 5.9100 - 5.3700 1.00 1284 129 0.2443 0.2983 REMARK 3 5 5.3700 - 4.9900 1.00 1279 141 0.2270 0.2885 REMARK 3 6 4.9900 - 4.6900 1.00 1249 140 0.1964 0.2942 REMARK 3 7 4.6900 - 4.4600 1.00 1280 146 0.1850 0.2298 REMARK 3 8 4.4600 - 4.2600 0.99 1269 135 0.1967 0.2911 REMARK 3 9 4.2600 - 4.1000 1.00 1276 145 0.1818 0.2421 REMARK 3 10 4.1000 - 3.9600 1.00 1263 139 0.1884 0.2602 REMARK 3 11 3.9600 - 3.8400 1.00 1289 152 0.2100 0.2919 REMARK 3 12 3.8400 - 3.7300 1.00 1309 138 0.2273 0.3158 REMARK 3 13 3.7300 - 3.6300 0.99 1228 135 0.2305 0.3341 REMARK 3 14 3.6300 - 3.5400 0.99 1312 145 0.2330 0.2922 REMARK 3 15 3.5400 - 3.4600 1.00 1241 141 0.2285 0.3514 REMARK 3 16 3.4600 - 3.3900 1.00 1240 144 0.2461 0.3700 REMARK 3 17 3.3900 - 3.3200 0.99 1308 135 0.2458 0.3301 REMARK 3 18 3.3200 - 3.2500 0.99 1279 132 0.2386 0.3520 REMARK 3 19 3.2500 - 3.2000 0.99 1201 155 0.2613 0.3604 REMARK 3 20 3.2000 - 3.1400 0.98 1278 135 0.2767 0.3396 REMARK 3 21 3.1400 - 3.0900 0.97 1259 138 0.2827 0.3705 REMARK 3 22 3.0900 - 3.0400 0.93 1197 144 0.2623 0.3624 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.460 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.449 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 34.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.022 6332 REMARK 3 ANGLE : 2.104 8588 REMARK 3 CHIRALITY : 0.105 916 REMARK 3 PLANARITY : 0.016 1112 REMARK 3 DIHEDRAL : 33.856 2452 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8GXF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 26-SEP-22. REMARK 100 THE DEPOSITION ID IS D_1300032387. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAY-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 V1.0 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 V1.0 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30921 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.040 REMARK 200 RESOLUTION RANGE LOW (A) : 42.950 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 9.400 REMARK 200 R MERGE (I) : 0.47100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 34.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.04 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.15 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.51100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.20.1 REMARK 200 STARTING MODEL: 1YRE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M NACL, 0.1M MES PH6.5, 10% REMARK 280 PEG4000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 49.50650 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 ALA B 189 REMARK 465 ALA B 190 REMARK 465 ALA B 191 REMARK 465 ARG B 192 REMARK 465 PRO B 193 REMARK 465 MET A 1 REMARK 465 ALA A 189 REMARK 465 ALA A 190 REMARK 465 ALA A 191 REMARK 465 ARG A 192 REMARK 465 PRO A 193 REMARK 465 MET C 1 REMARK 465 ALA C 189 REMARK 465 ALA C 190 REMARK 465 ALA C 191 REMARK 465 ARG C 192 REMARK 465 PRO C 193 REMARK 465 MET D 1 REMARK 465 ALA D 189 REMARK 465 ALA D 190 REMARK 465 ALA D 191 REMARK 465 ARG D 192 REMARK 465 PRO D 193 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O THR A 182 OG1 THR A 185 1.75 REMARK 500 OE1 GLN A 116 OE1 GLN A 120 1.82 REMARK 500 O THR C 182 OG1 THR C 185 1.92 REMARK 500 O ASP A 175 CD1 ILE A 179 1.97 REMARK 500 CD2 LEU B 24 CB TYR B 50 2.02 REMARK 500 OE1 GLN A 116 CD GLN A 120 2.03 REMARK 500 OE1 GLN A 116 NE2 GLN A 120 2.07 REMARK 500 O ARG B 100 OG SER B 103 2.12 REMARK 500 OG SER A 133 OD2 ASP A 164 2.14 REMARK 500 OE1 GLU B 26 CE1 HIS B 71 2.16 REMARK 500 OE1 GLU C 119 NE1 TRP C 176 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG B 51 O SER A 188 2545 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 21 CG GLU B 21 CD 0.094 REMARK 500 PHE A 79 CG PHE A 79 CD1 -0.094 REMARK 500 GLU C 90 CD GLU C 90 OE1 -0.089 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 HIS B 71 N - CA - C ANGL. DEV. = -21.9 DEGREES REMARK 500 PRO B 87 C - N - CD ANGL. DEV. = 15.9 DEGREES REMARK 500 PRO B 87 CA - N - CD ANGL. DEV. = -8.4 DEGREES REMARK 500 ARG B 100 NE - CZ - NH2 ANGL. DEV. = 4.9 DEGREES REMARK 500 LEU A 16 CB - CG - CD2 ANGL. DEV. = -14.6 DEGREES REMARK 500 PRO C 87 C - N - CD ANGL. DEV. = 15.7 DEGREES REMARK 500 CYS D 15 CA - CB - SG ANGL. DEV. = 9.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU B 28 -70.10 -75.97 REMARK 500 ARG B 35 3.00 -60.95 REMARK 500 LEU B 38 77.84 -116.93 REMARK 500 MET B 41 70.79 -153.18 REMARK 500 ALA B 55 -75.42 -54.82 REMARK 500 GLU B 56 -44.58 -17.43 REMARK 500 HIS B 71 177.95 89.57 REMARK 500 LEU B 86 -75.14 -46.74 REMARK 500 THR B 130 -167.44 -127.90 REMARK 500 ALA B 159 7.59 -62.50 REMARK 500 GLU B 184 8.35 -61.76 REMARK 500 THR B 185 -63.62 -99.97 REMARK 500 PRO A 18 166.16 -47.55 REMARK 500 ASN A 34 31.88 -85.34 REMARK 500 ASP A 70 -86.76 69.17 REMARK 500 PHE A 80 -165.42 -164.37 REMARK 500 GLU A 98 -44.76 -29.99 REMARK 500 LEU A 163 156.72 -45.20 REMARK 500 ARG A 181 -65.38 -27.38 REMARK 500 LEU A 183 12.64 -69.57 REMARK 500 PRO C 4 85.55 -69.75 REMARK 500 ASP C 70 10.73 59.32 REMARK 500 VAL C 74 -25.54 -149.68 REMARK 500 PHE C 80 -178.91 179.68 REMARK 500 ASP C 81 61.74 60.74 REMARK 500 MET C 83 73.00 -115.52 REMARK 500 LEU C 86 -75.16 -125.52 REMARK 500 ASP C 99 -8.90 -54.03 REMARK 500 THR C 130 -157.06 -117.71 REMARK 500 ASN C 134 55.63 -65.28 REMARK 500 LEU C 135 -15.19 -46.98 REMARK 500 GLU C 184 12.65 -61.57 REMARK 500 ALA D 31 -75.23 -47.88 REMARK 500 PRO D 44 0.96 -51.02 REMARK 500 ASP D 48 -2.56 -59.81 REMARK 500 ASP D 70 -75.54 61.35 REMARK 500 HIS D 71 -40.04 -138.54 REMARK 500 ASP D 81 68.08 60.26 REMARK 500 SER D 133 34.42 -87.54 REMARK 500 ASN D 134 76.53 -161.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU D 135 ARG D 136 146.90 REMARK 500 REMARK 500 REMARK: NULL DBREF1 8GXF B 1 193 UNP A0A0B3C4T8_9PSED DBREF2 8GXF B A0A0B3C4T8 1 193 DBREF1 8GXF A 1 193 UNP A0A0B3C4T8_9PSED DBREF2 8GXF A A0A0B3C4T8 1 193 DBREF1 8GXF C 1 193 UNP A0A0B3C4T8_9PSED DBREF2 8GXF C A0A0B3C4T8 1 193 DBREF1 8GXF D 1 193 UNP A0A0B3C4T8_9PSED DBREF2 8GXF D A0A0B3C4T8 1 193 SEQRES 1 B 193 MET PHE LYS PRO GLN PRO VAL THR LEU ARG ARG GLY ALA SEQRES 2 B 193 LEU CYS LEU GLU PRO LEU ALA GLU ALA ASP LEU VAL GLU SEQRES 3 B 193 LEU LEU SER LEU ALA GLU ALA ASN ARG GLN SER LEU ILE SEQRES 4 B 193 TYR MET ASN GLY PRO LEU ARG PRO ASP TRP TYR ARG GLN SEQRES 5 B 193 GLY LEU ALA GLU GLN ARG GLU GLY GLN ALA VAL ILE TYR SEQRES 6 B 193 ALA VAL ARG GLN ASP HIS ALA LEU VAL GLY THR THR ARG SEQRES 7 B 193 PHE PHE ASP PHE MET PRO GLY LEU PRO ALA VAL GLU ILE SEQRES 8 B 193 GLY GLY THR TRP LEU ALA GLU ASP ARG HIS GLY SER GLY SEQRES 9 B 193 LEU ASN ALA ALA ILE LYS PHE LEU MET LEU ARG GLN ALA SEQRES 10 B 193 PHE GLU GLN TRP GLU MET VAL ARG VAL GLN LEU LYS THR SEQRES 11 B 193 ALA ALA SER ASN LEU ARG ALA GLN ARG ALA ILE GLU LYS SEQRES 12 B 193 LEU GLY ALA ARG ARG GLU GLY GLN LEU ARG ASN HIS ARG SEQRES 13 B 193 ARG LEU ALA ASP GLY ARG LEU ASP ASP SER ILE LEU TYR SEQRES 14 B 193 SER ILE THR ASP ARG ASP TRP PRO GLU ILE ARG ARG THR SEQRES 15 B 193 LEU GLU THR GLU LEU SER ALA ALA ALA ARG PRO SEQRES 1 A 193 MET PHE LYS PRO GLN PRO VAL THR LEU ARG ARG GLY ALA SEQRES 2 A 193 LEU CYS LEU GLU PRO LEU ALA GLU ALA ASP LEU VAL GLU SEQRES 3 A 193 LEU LEU SER LEU ALA GLU ALA ASN ARG GLN SER LEU ILE SEQRES 4 A 193 TYR MET ASN GLY PRO LEU ARG PRO ASP TRP TYR ARG GLN SEQRES 5 A 193 GLY LEU ALA GLU GLN ARG GLU GLY GLN ALA VAL ILE TYR SEQRES 6 A 193 ALA VAL ARG GLN ASP HIS ALA LEU VAL GLY THR THR ARG SEQRES 7 A 193 PHE PHE ASP PHE MET PRO GLY LEU PRO ALA VAL GLU ILE SEQRES 8 A 193 GLY GLY THR TRP LEU ALA GLU ASP ARG HIS GLY SER GLY SEQRES 9 A 193 LEU ASN ALA ALA ILE LYS PHE LEU MET LEU ARG GLN ALA SEQRES 10 A 193 PHE GLU GLN TRP GLU MET VAL ARG VAL GLN LEU LYS THR SEQRES 11 A 193 ALA ALA SER ASN LEU ARG ALA GLN ARG ALA ILE GLU LYS SEQRES 12 A 193 LEU GLY ALA ARG ARG GLU GLY GLN LEU ARG ASN HIS ARG SEQRES 13 A 193 ARG LEU ALA ASP GLY ARG LEU ASP ASP SER ILE LEU TYR SEQRES 14 A 193 SER ILE THR ASP ARG ASP TRP PRO GLU ILE ARG ARG THR SEQRES 15 A 193 LEU GLU THR GLU LEU SER ALA ALA ALA ARG PRO SEQRES 1 C 193 MET PHE LYS PRO GLN PRO VAL THR LEU ARG ARG GLY ALA SEQRES 2 C 193 LEU CYS LEU GLU PRO LEU ALA GLU ALA ASP LEU VAL GLU SEQRES 3 C 193 LEU LEU SER LEU ALA GLU ALA ASN ARG GLN SER LEU ILE SEQRES 4 C 193 TYR MET ASN GLY PRO LEU ARG PRO ASP TRP TYR ARG GLN SEQRES 5 C 193 GLY LEU ALA GLU GLN ARG GLU GLY GLN ALA VAL ILE TYR SEQRES 6 C 193 ALA VAL ARG GLN ASP HIS ALA LEU VAL GLY THR THR ARG SEQRES 7 C 193 PHE PHE ASP PHE MET PRO GLY LEU PRO ALA VAL GLU ILE SEQRES 8 C 193 GLY GLY THR TRP LEU ALA GLU ASP ARG HIS GLY SER GLY SEQRES 9 C 193 LEU ASN ALA ALA ILE LYS PHE LEU MET LEU ARG GLN ALA SEQRES 10 C 193 PHE GLU GLN TRP GLU MET VAL ARG VAL GLN LEU LYS THR SEQRES 11 C 193 ALA ALA SER ASN LEU ARG ALA GLN ARG ALA ILE GLU LYS SEQRES 12 C 193 LEU GLY ALA ARG ARG GLU GLY GLN LEU ARG ASN HIS ARG SEQRES 13 C 193 ARG LEU ALA ASP GLY ARG LEU ASP ASP SER ILE LEU TYR SEQRES 14 C 193 SER ILE THR ASP ARG ASP TRP PRO GLU ILE ARG ARG THR SEQRES 15 C 193 LEU GLU THR GLU LEU SER ALA ALA ALA ARG PRO SEQRES 1 D 193 MET PHE LYS PRO GLN PRO VAL THR LEU ARG ARG GLY ALA SEQRES 2 D 193 LEU CYS LEU GLU PRO LEU ALA GLU ALA ASP LEU VAL GLU SEQRES 3 D 193 LEU LEU SER LEU ALA GLU ALA ASN ARG GLN SER LEU ILE SEQRES 4 D 193 TYR MET ASN GLY PRO LEU ARG PRO ASP TRP TYR ARG GLN SEQRES 5 D 193 GLY LEU ALA GLU GLN ARG GLU GLY GLN ALA VAL ILE TYR SEQRES 6 D 193 ALA VAL ARG GLN ASP HIS ALA LEU VAL GLY THR THR ARG SEQRES 7 D 193 PHE PHE ASP PHE MET PRO GLY LEU PRO ALA VAL GLU ILE SEQRES 8 D 193 GLY GLY THR TRP LEU ALA GLU ASP ARG HIS GLY SER GLY SEQRES 9 D 193 LEU ASN ALA ALA ILE LYS PHE LEU MET LEU ARG GLN ALA SEQRES 10 D 193 PHE GLU GLN TRP GLU MET VAL ARG VAL GLN LEU LYS THR SEQRES 11 D 193 ALA ALA SER ASN LEU ARG ALA GLN ARG ALA ILE GLU LYS SEQRES 12 D 193 LEU GLY ALA ARG ARG GLU GLY GLN LEU ARG ASN HIS ARG SEQRES 13 D 193 ARG LEU ALA ASP GLY ARG LEU ASP ASP SER ILE LEU TYR SEQRES 14 D 193 SER ILE THR ASP ARG ASP TRP PRO GLU ILE ARG ARG THR SEQRES 15 D 193 LEU GLU THR GLU LEU SER ALA ALA ALA ARG PRO HET COA B 201 48 HET COA A 201 48 HET COA C 201 48 HET COA D 201 48 HETNAM COA COENZYME A FORMUL 5 COA 4(C21 H36 N7 O16 P3 S) FORMUL 9 HOH *37(H2 O) HELIX 1 AA1 ALA B 20 ALA B 22 5 3 HELIX 2 AA2 ASP B 23 ASN B 34 1 12 HELIX 3 AA3 PRO B 47 GLY B 60 1 14 HELIX 4 AA4 GLU B 98 HIS B 101 5 4 HELIX 5 AA5 GLY B 104 GLN B 120 1 17 HELIX 6 AA6 ASN B 134 LEU B 144 1 11 HELIX 7 AA7 ASP B 175 LEU B 187 1 13 HELIX 8 AA8 ASP A 23 ASN A 34 1 12 HELIX 9 AA9 ARG A 46 GLU A 59 1 14 HELIX 10 AB1 GLU A 98 HIS A 101 5 4 HELIX 11 AB2 LEU A 105 GLU A 119 1 15 HELIX 12 AB3 ASN A 134 LEU A 144 1 11 HELIX 13 AB4 ASP A 175 GLU A 186 1 12 HELIX 14 AB5 ALA C 20 ALA C 22 5 3 HELIX 15 AB6 ASP C 23 ASN C 34 1 12 HELIX 16 AB7 ARG C 35 ILE C 39 5 5 HELIX 17 AB8 ARG C 46 GLU C 59 1 14 HELIX 18 AB9 GLU C 98 HIS C 101 5 4 HELIX 19 AC1 GLY C 104 GLU C 119 1 16 HELIX 20 AC2 ASN C 134 LYS C 143 1 10 HELIX 21 AC3 TRP C 176 GLU C 184 1 9 HELIX 22 AC4 ALA D 22 GLU D 32 1 11 HELIX 23 AC5 ASN D 34 ILE D 39 1 6 HELIX 24 AC6 ARG D 46 GLU D 59 1 14 HELIX 25 AC7 GLU D 98 HIS D 101 5 4 HELIX 26 AC8 GLY D 104 GLU D 119 1 16 HELIX 27 AC9 ARG D 136 GLY D 145 1 10 HELIX 28 AD1 ASP D 175 SER D 188 1 14 SHEET 1 AA1 8 LEU B 9 ARG B 11 0 SHEET 2 AA1 8 LEU B 14 PRO B 18 -1 O LEU B 16 N LEU B 9 SHEET 3 AA1 8 ALA B 62 ARG B 68 -1 O ALA B 66 N GLU B 17 SHEET 4 AA1 8 LEU B 73 MET B 83 -1 O THR B 77 N TYR B 65 SHEET 5 AA1 8 ALA B 88 LEU B 96 -1 O GLU B 90 N PHE B 80 SHEET 6 AA1 8 ARG B 125 ALA B 131 1 O GLN B 127 N VAL B 89 SHEET 7 AA1 8 LEU B 163 SER B 170 -1 O TYR B 169 N LEU B 128 SHEET 8 AA1 8 ARG B 147 ARG B 157 -1 N LEU B 152 O SER B 166 SHEET 1 AA2 8 LEU A 9 ARG A 11 0 SHEET 2 AA2 8 LEU A 14 PRO A 18 -1 O LEU A 14 N ARG A 11 SHEET 3 AA2 8 VAL A 63 GLN A 69 -1 O ALA A 66 N GLU A 17 SHEET 4 AA2 8 ALA A 72 MET A 83 -1 O GLY A 75 N VAL A 67 SHEET 5 AA2 8 ALA A 88 LEU A 96 -1 O ALA A 88 N MET A 83 SHEET 6 AA2 8 ARG A 125 ALA A 131 1 O GLN A 127 N VAL A 89 SHEET 7 AA2 8 LEU A 163 THR A 172 -1 O TYR A 169 N LEU A 128 SHEET 8 AA2 8 ARG A 147 ARG A 157 -1 N GLU A 149 O LEU A 168 SHEET 1 AA3 5 LEU C 9 ARG C 11 0 SHEET 2 AA3 5 LEU C 14 PRO C 18 -1 O LEU C 16 N LEU C 9 SHEET 3 AA3 5 ALA C 62 GLN C 69 -1 O ALA C 66 N GLU C 17 SHEET 4 AA3 5 ALA C 72 PHE C 80 -1 O ALA C 72 N GLN C 69 SHEET 5 AA3 5 TRP C 95 LEU C 96 -1 O TRP C 95 N THR C 76 SHEET 1 AA4 8 LEU C 9 ARG C 11 0 SHEET 2 AA4 8 LEU C 14 PRO C 18 -1 O LEU C 16 N LEU C 9 SHEET 3 AA4 8 ALA C 62 GLN C 69 -1 O ALA C 66 N GLU C 17 SHEET 4 AA4 8 ALA C 72 PHE C 80 -1 O ALA C 72 N GLN C 69 SHEET 5 AA4 8 ALA C 88 ILE C 91 -1 O GLU C 90 N PHE C 80 SHEET 6 AA4 8 ARG C 125 ALA C 131 1 O GLN C 127 N VAL C 89 SHEET 7 AA4 8 SER C 166 THR C 172 -1 O TYR C 169 N LEU C 128 SHEET 8 AA4 8 ARG C 147 GLN C 151 -1 N GLY C 150 O LEU C 168 SHEET 1 AA5 2 ARG C 156 ARG C 157 0 SHEET 2 AA5 2 LEU C 163 ASP C 164 -1 O ASP C 164 N ARG C 156 SHEET 1 AA6 8 LEU D 9 ARG D 10 0 SHEET 2 AA6 8 LEU D 14 PRO D 18 -1 O LEU D 16 N LEU D 9 SHEET 3 AA6 8 ALA D 62 GLN D 69 -1 O ARG D 68 N CYS D 15 SHEET 4 AA6 8 ALA D 72 MET D 83 -1 O PHE D 79 N VAL D 63 SHEET 5 AA6 8 ALA D 88 LEU D 96 -1 O ALA D 88 N MET D 83 SHEET 6 AA6 8 ARG D 125 ALA D 131 1 O GLN D 127 N VAL D 89 SHEET 7 AA6 8 LEU D 163 THR D 172 -1 O ILE D 171 N VAL D 126 SHEET 8 AA6 8 ARG D 147 ARG D 157 -1 N GLU D 149 O LEU D 168 CISPEP 1 HIS B 71 ALA B 72 0 0.46 CISPEP 2 LEU B 86 PRO B 87 0 -0.31 CISPEP 3 LEU A 86 PRO A 87 0 -11.06 CISPEP 4 LEU C 86 PRO C 87 0 -0.77 CISPEP 5 LEU D 86 PRO D 87 0 -5.04 CRYST1 43.889 99.013 98.822 90.00 101.87 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022785 0.000000 0.004787 0.00000 SCALE2 0.000000 0.010100 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010340 0.00000