HEADER BIOSYNTHETIC PROTEIN 22-SEP-22 8GYI TITLE CRYSTAL STRUCTURE OF FIC25 (HOLO FORM) FROM STREPTOMYCES FICELLUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: DEGT/DNRJ/ERYC1/STRS FAMILY AMINOTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GLUTAMINE--SCYLLO-INOSITOL TRANSAMINASE, FIC25; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES FICELLUS; SOURCE 3 ORGANISM_TAXID: 1977088; SOURCE 4 GENE: EIZ62_06105; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS SUGAR AMINOTRANSFERASE, BIOSYNTHETIC ENZYME, DADH, BIOSYNTHETIC KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.KUROSAWA,A.YOSHIDA,T.TOMITA,M.NISHIYAMA REVDAT 3 29-NOV-23 8GYI 1 REMARK REVDAT 2 01-MAR-23 8GYI 1 JRNL REVDAT 1 22-FEB-23 8GYI 0 JRNL AUTH S.KUROSAWA,H.OKAMURA,A.YOSHIDA,T.TOMITA,Y.SONE,F.HASEBE, JRNL AUTH 2 T.SHINADA,H.TAKIKAWA,S.KOSONO,M.NISHIYAMA JRNL TITL MECHANISMS OF SUGAR AMINOTRANSFERASE-LIKE ENZYMES TO JRNL TITL 2 SYNTHESIZE STEREOISOMERS OF NON-PROTEINOGENIC AMINO ACIDS IN JRNL TITL 3 NATURAL PRODUCT BIOSYNTHESIS. JRNL REF ACS CHEM.BIOL. V. 18 385 2023 JRNL REFN ESSN 1554-8937 JRNL PMID 36669120 JRNL DOI 10.1021/ACSCHEMBIO.2C00823 REMARK 2 REMARK 2 RESOLUTION. 1.93 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.93 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.48 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 94493 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4946 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.93 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.98 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6873 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.45 REMARK 3 BIN R VALUE (WORKING SET) : 0.2460 REMARK 3 BIN FREE R VALUE SET COUNT : 378 REMARK 3 BIN FREE R VALUE : 0.2600 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6299 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 61 REMARK 3 SOLVENT ATOMS : 755 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.71000 REMARK 3 B22 (A**2) : 0.71000 REMARK 3 B33 (A**2) : -2.30000 REMARK 3 B12 (A**2) : 0.35000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.109 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.102 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.076 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.735 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6616 ; 0.018 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 6145 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9025 ; 1.244 ; 1.642 REMARK 3 BOND ANGLES OTHERS (DEGREES): 14138 ; 1.165 ; 1.572 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 858 ; 6.026 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 363 ;28.074 ;20.028 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 960 ;13.209 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 69 ;15.725 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 840 ; 0.049 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7719 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1514 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 8GYI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-SEP-22. REMARK 100 THE DEPOSITION ID IS D_1300032003. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-DEC-21 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 99447 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.930 REMARK 200 RESOLUTION RANGE LOW (A) : 48.480 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 10.20 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.93 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.96 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.90000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 8GYH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0 M SODIUM CITRATE, 0.1 M IMIDAZOLE, REMARK 280 PH 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.00600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 19.00300 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 28.50450 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 9.50150 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 47.50750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 41 REMARK 465 LEU A 42 REMARK 465 VAL A 43 REMARK 465 SER A 44 REMARK 465 ASN A 45 REMARK 465 SER A 46 REMARK 465 ASP A 47 REMARK 465 GLY A 48 REMARK 465 SER A 234 REMARK 465 GLY A 235 REMARK 465 SER A 431 REMARK 465 GLY A 432 REMARK 465 GLY A 433 REMARK 465 HIS A 434 REMARK 465 HIS A 435 REMARK 465 HIS A 436 REMARK 465 HIS A 437 REMARK 465 HIS A 438 REMARK 465 HIS A 439 REMARK 465 MET B 1 REMARK 465 LEU B 42 REMARK 465 VAL B 43 REMARK 465 SER B 44 REMARK 465 ASN B 45 REMARK 465 SER B 46 REMARK 465 ASP B 47 REMARK 465 GLY B 48 REMARK 465 GLU B 49 REMARK 465 ALA B 430 REMARK 465 SER B 431 REMARK 465 GLY B 432 REMARK 465 GLY B 433 REMARK 465 HIS B 434 REMARK 465 HIS B 435 REMARK 465 HIS B 436 REMARK 465 HIS B 437 REMARK 465 HIS B 438 REMARK 465 HIS B 439 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 236 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 41 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 236 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 318 CG OD1 OD2 REMARK 470 VAL B 320 CG1 CG2 REMARK 470 MET B 422 CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 148 -3.35 66.85 REMARK 500 GLN A 344 122.07 80.77 REMARK 500 LYS A 395 -55.49 77.92 REMARK 500 HIS B 148 -2.14 68.42 REMARK 500 GLN B 344 119.46 83.88 REMARK 500 ALA B 371 46.68 -96.58 REMARK 500 ASP B 379 -177.72 -62.92 REMARK 500 LYS B 395 -57.45 78.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B1342 DISTANCE = 6.20 ANGSTROMS REMARK 525 HOH B1343 DISTANCE = 6.81 ANGSTROMS DBREF1 8GYI A 1 431 UNP A0A1W5T2G9_9ACTN DBREF2 8GYI A A0A1W5T2G9 1 431 DBREF1 8GYI B 1 431 UNP A0A1W5T2G9_9ACTN DBREF2 8GYI B A0A1W5T2G9 1 431 SEQADV 8GYI GLY A 432 UNP A0A1W5T2G EXPRESSION TAG SEQADV 8GYI GLY A 433 UNP A0A1W5T2G EXPRESSION TAG SEQADV 8GYI HIS A 434 UNP A0A1W5T2G EXPRESSION TAG SEQADV 8GYI HIS A 435 UNP A0A1W5T2G EXPRESSION TAG SEQADV 8GYI HIS A 436 UNP A0A1W5T2G EXPRESSION TAG SEQADV 8GYI HIS A 437 UNP A0A1W5T2G EXPRESSION TAG SEQADV 8GYI HIS A 438 UNP A0A1W5T2G EXPRESSION TAG SEQADV 8GYI HIS A 439 UNP A0A1W5T2G EXPRESSION TAG SEQADV 8GYI GLY B 432 UNP A0A1W5T2G EXPRESSION TAG SEQADV 8GYI GLY B 433 UNP A0A1W5T2G EXPRESSION TAG SEQADV 8GYI HIS B 434 UNP A0A1W5T2G EXPRESSION TAG SEQADV 8GYI HIS B 435 UNP A0A1W5T2G EXPRESSION TAG SEQADV 8GYI HIS B 436 UNP A0A1W5T2G EXPRESSION TAG SEQADV 8GYI HIS B 437 UNP A0A1W5T2G EXPRESSION TAG SEQADV 8GYI HIS B 438 UNP A0A1W5T2G EXPRESSION TAG SEQADV 8GYI HIS B 439 UNP A0A1W5T2G EXPRESSION TAG SEQRES 1 A 439 MET SER LYS LEU ALA ALA PHE GLY GLY PRO PRO ALA VAL SEQRES 2 A 439 PRO ARG ASP ARG ARG HIS VAL GLU TRP PRO LEU VAL GLU SEQRES 3 A 439 ASP GLU ASP ARG LYS ALA VAL ILE ASP ALA LEU ASP GLY SEQRES 4 A 439 ALA ARG LEU VAL SER ASN SER ASP GLY GLU ASN PRO VAL SEQRES 5 A 439 SER THR LEU GLU GLU GLN TRP ALA GLY ARG PHE GLY PHE SEQRES 6 A 439 GLY HIS CYS VAL ALA VAL SER THR GLY THR ALA ALA LEU SEQRES 7 A 439 SER LEU ALA LEU ALA ALA LEU GLY VAL GLY PRO GLY ASP SEQRES 8 A 439 GLU VAL ILE VAL PRO ALA LEU SER PHE ILE ALA THR GLY SEQRES 9 A 439 LEU ALA PRO VAL HIS GLN MET ALA VAL PRO VAL PHE ALA SEQRES 10 A 439 ASP VAL ASP PRO VAL THR PHE ASN LEU ASP PRO ASP ASP SEQRES 11 A 439 VAL GLU ARG ARG ILE THR GLY ARG THR ALA ALA ILE ILE SEQRES 12 A 439 PRO VAL HIS LEU HIS GLY ALA PRO ALA ASP MET ASP ARG SEQRES 13 A 439 ILE THR ALA ILE ALA ARG ARG HIS GLY LEU ALA VAL ILE SEQRES 14 A 439 GLU ASP ALA ALA GLN ALA PRO GLY ALA THR HIS ARG GLY SEQRES 15 A 439 ARG PRO VAL GLY GLY ILE GLY ASP ALA GLY ALA PHE SER SEQRES 16 A 439 LEU GLN ALA THR LYS ASN ILE PRO THR CYS GLY GLU GLY SEQRES 17 A 439 GLY LEU LEU VAL THR GLY ASN ALA GLU LEU ALA GLU SER SEQRES 18 A 439 VAL ARG ARG GLY ARG GLN PHE GLY GLU VAL ILE GLU SER SEQRES 19 A 439 GLY ARG GLU ARG ASP TYR VAL SER TYR GLY LEU GLY TRP SEQRES 20 A 439 ASN HIS LYS MET ASN ALA LEU GLN ALA ALA PHE THR SER SEQRES 21 A 439 ALA GLN LEU THR ARG PHE ASP ASP TYR GLU SER ALA ARG SEQRES 22 A 439 GLN ARG ASN VAL ALA ALA PHE LEU ALA ARG LEU ALA GLU SEQRES 23 A 439 LEU PRO GLY LEU ARG VAL PRO THR ALA ALA PRO ASP THR SEQRES 24 A 439 THR HIS ALA TRP HIS ILE LEU ARG PHE ARG PHE ASP PRO SEQRES 25 A 439 ALA ALA PHE GLY LEU ASP GLY VAL ARG PRO GLN ALA LEU SEQRES 26 A 439 ARG SER ALA LEU ARG ARG LEU LEU ARG ALA GLU GLY VAL SEQRES 27 A 439 PRO MET SER GLN TYR GLN LEU MET PRO LEU PRO ASP GLN SEQRES 28 A 439 LYS VAL PHE VAL ASP ARG VAL GLY PHE GLY GLY GLY TYR SEQRES 29 A 439 PRO TRP THR VAL THR GLY ALA THR GLY PRO ALA ALA GLY SEQRES 30 A 439 GLU ASP HIS PRO VAL ALA ARG ALA VAL ILE ALA ASP SER SEQRES 31 A 439 LEU THR LEU GLN LYS ARG HIS LEU HIS PRO GLU SER GLY SEQRES 32 A 439 GLU LEU LEU HIS LEU TYR ALA ASP ALA PHE GLU LYS VAL SEQRES 33 A 439 TRP ALA ASN PRO ASP MET VAL ALA THR LEU ALA GLY ALA SEQRES 34 A 439 ALA SER GLY GLY HIS HIS HIS HIS HIS HIS SEQRES 1 B 439 MET SER LYS LEU ALA ALA PHE GLY GLY PRO PRO ALA VAL SEQRES 2 B 439 PRO ARG ASP ARG ARG HIS VAL GLU TRP PRO LEU VAL GLU SEQRES 3 B 439 ASP GLU ASP ARG LYS ALA VAL ILE ASP ALA LEU ASP GLY SEQRES 4 B 439 ALA ARG LEU VAL SER ASN SER ASP GLY GLU ASN PRO VAL SEQRES 5 B 439 SER THR LEU GLU GLU GLN TRP ALA GLY ARG PHE GLY PHE SEQRES 6 B 439 GLY HIS CYS VAL ALA VAL SER THR GLY THR ALA ALA LEU SEQRES 7 B 439 SER LEU ALA LEU ALA ALA LEU GLY VAL GLY PRO GLY ASP SEQRES 8 B 439 GLU VAL ILE VAL PRO ALA LEU SER PHE ILE ALA THR GLY SEQRES 9 B 439 LEU ALA PRO VAL HIS GLN MET ALA VAL PRO VAL PHE ALA SEQRES 10 B 439 ASP VAL ASP PRO VAL THR PHE ASN LEU ASP PRO ASP ASP SEQRES 11 B 439 VAL GLU ARG ARG ILE THR GLY ARG THR ALA ALA ILE ILE SEQRES 12 B 439 PRO VAL HIS LEU HIS GLY ALA PRO ALA ASP MET ASP ARG SEQRES 13 B 439 ILE THR ALA ILE ALA ARG ARG HIS GLY LEU ALA VAL ILE SEQRES 14 B 439 GLU ASP ALA ALA GLN ALA PRO GLY ALA THR HIS ARG GLY SEQRES 15 B 439 ARG PRO VAL GLY GLY ILE GLY ASP ALA GLY ALA PHE SER SEQRES 16 B 439 LEU GLN ALA THR LYS ASN ILE PRO THR CYS GLY GLU GLY SEQRES 17 B 439 GLY LEU LEU VAL THR GLY ASN ALA GLU LEU ALA GLU SER SEQRES 18 B 439 VAL ARG ARG GLY ARG GLN PHE GLY GLU VAL ILE GLU SER SEQRES 19 B 439 GLY ARG GLU ARG ASP TYR VAL SER TYR GLY LEU GLY TRP SEQRES 20 B 439 ASN HIS LYS MET ASN ALA LEU GLN ALA ALA PHE THR SER SEQRES 21 B 439 ALA GLN LEU THR ARG PHE ASP ASP TYR GLU SER ALA ARG SEQRES 22 B 439 GLN ARG ASN VAL ALA ALA PHE LEU ALA ARG LEU ALA GLU SEQRES 23 B 439 LEU PRO GLY LEU ARG VAL PRO THR ALA ALA PRO ASP THR SEQRES 24 B 439 THR HIS ALA TRP HIS ILE LEU ARG PHE ARG PHE ASP PRO SEQRES 25 B 439 ALA ALA PHE GLY LEU ASP GLY VAL ARG PRO GLN ALA LEU SEQRES 26 B 439 ARG SER ALA LEU ARG ARG LEU LEU ARG ALA GLU GLY VAL SEQRES 27 B 439 PRO MET SER GLN TYR GLN LEU MET PRO LEU PRO ASP GLN SEQRES 28 B 439 LYS VAL PHE VAL ASP ARG VAL GLY PHE GLY GLY GLY TYR SEQRES 29 B 439 PRO TRP THR VAL THR GLY ALA THR GLY PRO ALA ALA GLY SEQRES 30 B 439 GLU ASP HIS PRO VAL ALA ARG ALA VAL ILE ALA ASP SER SEQRES 31 B 439 LEU THR LEU GLN LYS ARG HIS LEU HIS PRO GLU SER GLY SEQRES 32 B 439 GLU LEU LEU HIS LEU TYR ALA ASP ALA PHE GLU LYS VAL SEQRES 33 B 439 TRP ALA ASN PRO ASP MET VAL ALA THR LEU ALA GLY ALA SEQRES 34 B 439 ALA SER GLY GLY HIS HIS HIS HIS HIS HIS HET GOL A 501 6 HET IMD A 502 5 HET IMD A 503 5 HET IMD A 504 5 HET IMD A 505 5 HET PLP A 506 15 HET IMD B 901 5 HET PLP B 902 15 HETNAM GOL GLYCEROL HETNAM IMD IMIDAZOLE HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN PLP VITAMIN B6 PHOSPHATE FORMUL 3 GOL C3 H8 O3 FORMUL 4 IMD 5(C3 H5 N2 1+) FORMUL 8 PLP 2(C8 H10 N O6 P) FORMUL 11 HOH *755(H2 O) HELIX 1 AA1 LEU A 4 GLY A 8 5 5 HELIX 2 AA2 PRO A 14 ARG A 18 5 5 HELIX 3 AA3 GLU A 26 ALA A 40 1 15 HELIX 4 AA4 ASN A 50 GLY A 64 1 15 HELIX 5 AA5 THR A 73 LEU A 85 1 13 HELIX 6 AA6 ILE A 101 GLN A 110 1 10 HELIX 7 AA7 ASP A 127 ILE A 135 1 9 HELIX 8 AA8 HIS A 146 ALA A 150 5 5 HELIX 9 AA9 ASP A 153 GLY A 165 1 13 HELIX 10 AB1 ASN A 215 ARG A 226 1 12 HELIX 11 AB2 ASN A 252 ARG A 265 1 14 HELIX 12 AB3 ARG A 265 ALA A 285 1 21 HELIX 13 AB4 PRO A 312 GLY A 316 5 5 HELIX 14 AB5 ARG A 321 GLU A 336 1 16 HELIX 15 AB6 PRO A 347 ASP A 350 5 4 HELIX 16 AB7 GLN A 351 ARG A 357 1 7 HELIX 17 AB8 HIS A 380 ASP A 389 1 10 HELIX 18 AB9 ARG A 396 HIS A 399 5 4 HELIX 19 AC1 SER A 402 ALA A 418 1 17 HELIX 20 AC2 ASN A 419 ALA A 429 1 11 HELIX 21 AC3 LEU B 4 GLY B 8 5 5 HELIX 22 AC4 PRO B 14 ARG B 18 5 5 HELIX 23 AC5 GLU B 26 ALA B 40 1 15 HELIX 24 AC6 PRO B 51 GLY B 64 1 14 HELIX 25 AC7 THR B 73 LEU B 85 1 13 HELIX 26 AC8 PHE B 100 GLN B 110 1 11 HELIX 27 AC9 ASP B 127 ARG B 134 1 8 HELIX 28 AD1 HIS B 146 ALA B 150 5 5 HELIX 29 AD2 ASP B 153 GLY B 165 1 13 HELIX 30 AD3 ASN B 215 ARG B 226 1 12 HELIX 31 AD4 ASN B 252 THR B 264 1 13 HELIX 32 AD5 ARG B 265 ALA B 285 1 21 HELIX 33 AD6 PRO B 312 GLY B 316 5 5 HELIX 34 AD7 ARG B 321 GLU B 336 1 16 HELIX 35 AD8 PRO B 347 ASP B 350 5 4 HELIX 36 AD9 GLN B 351 ARG B 357 1 7 HELIX 37 AE1 PRO B 365 GLY B 370 1 6 HELIX 38 AE2 HIS B 380 ASP B 389 1 10 HELIX 39 AE3 ARG B 396 HIS B 399 5 4 HELIX 40 AE4 SER B 402 ALA B 418 1 17 HELIX 41 AE5 ASN B 419 ALA B 429 1 11 SHEET 1 AA1 7 HIS A 67 VAL A 71 0 SHEET 2 AA1 7 GLY A 209 THR A 213 -1 O LEU A 211 N VAL A 69 SHEET 3 AA1 7 ALA A 191 SER A 195 -1 N GLY A 192 O VAL A 212 SHEET 4 AA1 7 ALA A 167 ASP A 171 1 N GLU A 170 O ALA A 193 SHEET 5 AA1 7 THR A 139 ILE A 142 1 N ALA A 140 O ALA A 167 SHEET 6 AA1 7 GLU A 92 PRO A 96 1 N GLU A 92 O ALA A 140 SHEET 7 AA1 7 VAL A 113 ALA A 117 1 O VAL A 115 N VAL A 93 SHEET 1 AA2 2 THR A 179 HIS A 180 0 SHEET 2 AA2 2 ARG A 183 PRO A 184 -1 O ARG A 183 N HIS A 180 SHEET 1 AA3 3 LEU A 290 ARG A 291 0 SHEET 2 AA3 3 ILE A 305 PHE A 310 -1 O ARG A 309 N ARG A 291 SHEET 3 AA3 3 SER A 390 GLN A 394 -1 O LEU A 391 N PHE A 308 SHEET 1 AA4 7 HIS B 67 VAL B 71 0 SHEET 2 AA4 7 GLY B 209 THR B 213 -1 O LEU B 211 N VAL B 69 SHEET 3 AA4 7 ALA B 191 SER B 195 -1 N GLY B 192 O VAL B 212 SHEET 4 AA4 7 ALA B 167 ASP B 171 1 N GLU B 170 O ALA B 193 SHEET 5 AA4 7 THR B 139 ILE B 142 1 N ALA B 140 O ALA B 167 SHEET 6 AA4 7 GLU B 92 PRO B 96 1 N GLU B 92 O ALA B 140 SHEET 7 AA4 7 VAL B 113 ALA B 117 1 O VAL B 115 N VAL B 93 SHEET 1 AA5 3 ARG B 183 PRO B 184 0 SHEET 2 AA5 3 THR B 179 HIS B 180 -1 N HIS B 180 O ARG B 183 SHEET 3 AA5 3 THR B 299 THR B 300 -1 O THR B 300 N THR B 179 SHEET 1 AA6 3 LEU B 290 ARG B 291 0 SHEET 2 AA6 3 ILE B 305 PHE B 310 -1 O ARG B 309 N ARG B 291 SHEET 3 AA6 3 SER B 390 GLN B 394 -1 O LEU B 391 N PHE B 308 LINK NZ LYS A 200 C4A PLP A 506 1555 1555 1.35 LINK NZ LYS B 200 C4A PLP B 902 1555 1555 1.35 CISPEP 1 TRP A 22 PRO A 23 0 0.39 CISPEP 2 TYR A 364 PRO A 365 0 13.17 CISPEP 3 TRP B 22 PRO B 23 0 1.98 CISPEP 4 TYR B 364 PRO B 365 0 13.22 CRYST1 201.628 201.628 57.009 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004960 0.002863 0.000000 0.00000 SCALE2 0.000000 0.005727 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017541 0.00000