data_8GZO # _entry.id 8GZO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8GZO pdb_00008gzo 10.2210/pdb8gzo/pdb WWPDB D_1300032543 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8GZO _pdbx_database_status.recvd_initial_deposition_date 2022-09-27 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _audit_author.name 'Fan, S.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biophys.J. _citation.journal_id_ASTM BIOJAU _citation.journal_id_CSD 0030 _citation.journal_id_ISSN 1542-0086 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 122 _citation.language ? _citation.page_first 2686 _citation.page_last 2695 _citation.title 'Stability of collagen heterotrimer with same charge pattern and different charged residue identities.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.bpj.2023.05.023 _citation.pdbx_database_id_PubMed 37226442 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Huang, Y.' 1 ? primary 'Lan, J.' 2 ? primary 'Wu, C.' 3 ? primary 'Zhang, R.' 4 ? primary 'Zheng, H.' 5 ? primary 'Fan, S.' 6 ? primary 'Xu, F.' 7 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 105.460 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8GZO _cell.details ? _cell.formula_units_Z ? _cell.length_a 61.298 _cell.length_a_esd ? _cell.length_b 42.454 _cell.length_b_esd ? _cell.length_c 28.930 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8GZO _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'collagen-like peptide' 3079.336 1 ? ? ? ? 2 polymer syn 'collagen-like peptide' 3052.890 1 ? ? ? ? 3 polymer syn 'collagen-like peptide' 3167.572 1 ? ? ? ? 4 water nat water 18.015 243 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes 'YGPKGPKGPKGK(HYP)GPDGD(HYP)GD(HYP)GD(HYP)GPKGPKG' YGPKGPKGPKGKPGPDGDPGDPGDPGPKGPKG A ? 2 'polypeptide(L)' no yes 'YGPDGD(HYP)GD(HYP)GD(HYP)GPDGR(HYP)GPDGPDGPDGD(HYP)G' YGPDGDPGDPGDPGPDGRPGPDGPDGPDGDPG B ? 3 'polypeptide(L)' no yes 'YGK(HYP)GPEGPEGPKGK(HYP)GPKGK(HYP)GK(HYP)GK(HYP)GK(HYP)G' YGKPGPEGPEGPKGKPGPKGKPGKPGKPGKPG C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 TYR n 1 2 GLY n 1 3 PRO n 1 4 LYS n 1 5 GLY n 1 6 PRO n 1 7 LYS n 1 8 GLY n 1 9 PRO n 1 10 LYS n 1 11 GLY n 1 12 LYS n 1 13 HYP n 1 14 GLY n 1 15 PRO n 1 16 ASP n 1 17 GLY n 1 18 ASP n 1 19 HYP n 1 20 GLY n 1 21 ASP n 1 22 HYP n 1 23 GLY n 1 24 ASP n 1 25 HYP n 1 26 GLY n 1 27 PRO n 1 28 LYS n 1 29 GLY n 1 30 PRO n 1 31 LYS n 1 32 GLY n 2 1 TYR n 2 2 GLY n 2 3 PRO n 2 4 ASP n 2 5 GLY n 2 6 ASP n 2 7 HYP n 2 8 GLY n 2 9 ASP n 2 10 HYP n 2 11 GLY n 2 12 ASP n 2 13 HYP n 2 14 GLY n 2 15 PRO n 2 16 ASP n 2 17 GLY n 2 18 ARG n 2 19 HYP n 2 20 GLY n 2 21 PRO n 2 22 ASP n 2 23 GLY n 2 24 PRO n 2 25 ASP n 2 26 GLY n 2 27 PRO n 2 28 ASP n 2 29 GLY n 2 30 ASP n 2 31 HYP n 2 32 GLY n 3 1 TYR n 3 2 GLY n 3 3 LYS n 3 4 HYP n 3 5 GLY n 3 6 PRO n 3 7 GLU n 3 8 GLY n 3 9 PRO n 3 10 GLU n 3 11 GLY n 3 12 PRO n 3 13 LYS n 3 14 GLY n 3 15 LYS n 3 16 HYP n 3 17 GLY n 3 18 PRO n 3 19 LYS n 3 20 GLY n 3 21 LYS n 3 22 HYP n 3 23 GLY n 3 24 LYS n 3 25 HYP n 3 26 GLY n 3 27 LYS n 3 28 HYP n 3 29 GLY n 3 30 LYS n 3 31 HYP n 3 32 GLY n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 32 'chemical production metagenome' ? 2495586 ? 2 1 sample 1 32 'chemical production metagenome' ? 2495586 ? 3 1 sample 1 32 'chemical production metagenome' ? 2495586 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 8GZO 8GZO ? 1 ? 1 2 PDB 8GZO 8GZO ? 2 ? 1 3 PDB 8GZO 8GZO ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8GZO A 1 ? 32 ? 8GZO 1 ? 32 ? 1 32 2 2 8GZO B 1 ? 32 ? 8GZO 1 ? 32 ? 1 32 3 3 8GZO C 1 ? 32 ? 8GZO 1 ? 32 ? 1 32 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 HYP 'L-peptide linking' n 4-HYDROXYPROLINE HYDROXYPROLINE 'C5 H9 N O3' 131.130 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8GZO _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.95 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 36.94 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2M ammonium acetate, 0.1M Sodium acetate, pH 4.5, 30% PEG 3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-06-15 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9798 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL17U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9798 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL17U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 8GZO _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.23 _reflns.d_resolution_low 18.02 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 18749 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 89.87 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.1 _reflns.pdbx_Rmerge_I_obs 0.041 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 32.02 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? _reflns.pdbx_CC_split_method ? # _reflns_shell.d_res_high 1.23 _reflns_shell.d_res_low 1.25 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 18739 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.041 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 77.230 _refine.B_iso_mean 19.3813 _refine.B_iso_min 7.280 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8GZO _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.2300 _refine.ls_d_res_low 18.0200 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 18735 _refine.ls_number_reflns_R_free 938 _refine.ls_number_reflns_R_work 17797 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 89.8800 _refine.ls_percent_reflns_R_free 5.0100 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1744 _refine.ls_R_factor_R_free 0.1904 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1736 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.480 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5YAN _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 18.6500 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1200 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.2300 _refine_hist.d_res_low 18.0200 _refine_hist.number_atoms_solvent 244 _refine_hist.number_atoms_total 885 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 95 _refine_hist.pdbx_B_iso_mean_ligand 15.96 _refine_hist.pdbx_B_iso_mean_solvent 30.66 _refine_hist.pdbx_number_atoms_protein 637 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.2300 1.3000 2689 . 113 2576 91.0000 . . . 0.2165 0.0000 0.1677 . . . . . . . 7 . . . 'X-RAY DIFFRACTION' 1.3000 1.3800 2762 . 142 2620 93.0000 . . . 0.1801 0.0000 0.1547 . . . . . . . 7 . . . 'X-RAY DIFFRACTION' 1.3800 1.4800 2685 . 164 2521 91.0000 . . . 0.1941 0.0000 0.1611 . . . . . . . 7 . . . 'X-RAY DIFFRACTION' 1.4800 1.6300 2763 . 143 2620 93.0000 . . . 0.2012 0.0000 0.1648 . . . . . . . 7 . . . 'X-RAY DIFFRACTION' 1.6300 1.8700 2736 . 112 2624 92.0000 . . . 0.1666 0.0000 0.1580 . . . . . . . 7 . . . 'X-RAY DIFFRACTION' 1.8700 2.3500 2742 . 159 2583 92.0000 . . . 0.1799 0.0000 0.1544 . . . . . . . 7 . . . 'X-RAY DIFFRACTION' 2.3500 18.0200 2358 . 105 2253 78.0000 . . . 0.2045 0.0000 0.2071 . . . . . . . 7 . . . # _struct.entry_id 8GZO _struct.title 'Crystal structure of collagen heterotrimer with K, D, E, R residuesC' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8GZO _struct_keywords.text 'collagen, STRUCTURAL PROTEIN' _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A LYS 12 C ? ? ? 1_555 A HYP 13 N ? ? A LYS 12 A HYP 13 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale2 covale both ? A HYP 13 C ? ? ? 1_555 A GLY 14 N ? ? A HYP 13 A GLY 14 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale3 covale both ? A ASP 18 C ? ? ? 1_555 A HYP 19 N ? ? A ASP 18 A HYP 19 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale4 covale both ? A HYP 19 C ? ? ? 1_555 A GLY 20 N ? ? A HYP 19 A GLY 20 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale5 covale both ? A ASP 21 C ? ? ? 1_555 A HYP 22 N ? ? A ASP 21 A HYP 22 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale6 covale both ? A HYP 22 C ? ? ? 1_555 A GLY 23 N ? ? A HYP 22 A GLY 23 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale7 covale both ? A ASP 24 C ? ? ? 1_555 A HYP 25 N ? ? A ASP 24 A HYP 25 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale8 covale both ? A HYP 25 C ? ? ? 1_555 A GLY 26 N ? ? A HYP 25 A GLY 26 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale9 covale both ? B ASP 6 C ? ? ? 1_555 B HYP 7 N ? ? B ASP 6 B HYP 7 1_555 ? ? ? ? ? ? ? 1.315 ? ? covale10 covale both ? B HYP 7 C ? ? ? 1_555 B GLY 8 N ? ? B HYP 7 B GLY 8 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale11 covale both ? B ASP 9 C ? ? ? 1_555 B HYP 10 N ? ? B ASP 9 B HYP 10 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale12 covale both ? B HYP 10 C ? ? ? 1_555 B GLY 11 N ? ? B HYP 10 B GLY 11 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale13 covale both ? B ASP 12 C ? ? ? 1_555 B HYP 13 N ? ? B ASP 12 B HYP 13 1_555 ? ? ? ? ? ? ? 1.311 ? ? covale14 covale both ? B HYP 13 C ? ? ? 1_555 B GLY 14 N ? ? B HYP 13 B GLY 14 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale15 covale both ? B ARG 18 C ? ? ? 1_555 B HYP 19 N ? ? B ARG 18 B HYP 19 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale16 covale both ? B HYP 19 C ? ? ? 1_555 B GLY 20 N ? ? B HYP 19 B GLY 20 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale17 covale both ? B ASP 30 C ? ? ? 1_555 B HYP 31 N ? ? B ASP 30 B HYP 31 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale18 covale both ? B HYP 31 C ? ? ? 1_555 B GLY 32 N A ? B HYP 31 B GLY 32 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale19 covale both ? B HYP 31 C ? ? ? 1_555 B GLY 32 N B ? B HYP 31 B GLY 32 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale20 covale both ? C LYS 3 C ? ? ? 1_555 C HYP 4 N ? ? C LYS 3 C HYP 4 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale21 covale both ? C HYP 4 C ? ? ? 1_555 C GLY 5 N ? ? C HYP 4 C GLY 5 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale22 covale both ? C LYS 15 C ? ? ? 1_555 C HYP 16 N ? ? C LYS 15 C HYP 16 1_555 ? ? ? ? ? ? ? 1.311 ? ? covale23 covale both ? C HYP 16 C ? ? ? 1_555 C GLY 17 N ? ? C HYP 16 C GLY 17 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale24 covale both ? C LYS 21 C ? ? ? 1_555 C HYP 22 N ? ? C LYS 21 C HYP 22 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale25 covale both ? C HYP 22 C ? ? ? 1_555 C GLY 23 N ? ? C HYP 22 C GLY 23 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale26 covale both ? C LYS 24 C ? ? ? 1_555 C HYP 25 N ? ? C LYS 24 C HYP 25 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale27 covale both ? C HYP 25 C ? ? ? 1_555 C GLY 26 N ? ? C HYP 25 C GLY 26 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale28 covale both ? C LYS 27 C ? ? ? 1_555 C HYP 28 N ? ? C LYS 27 C HYP 28 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale29 covale both ? C HYP 28 C ? ? ? 1_555 C GLY 29 N ? ? C HYP 28 C GLY 29 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale30 covale both ? C LYS 30 C ? ? ? 1_555 C HYP 31 N ? ? C LYS 30 C HYP 31 1_555 ? ? ? ? ? ? ? 1.331 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 8GZO _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.016314 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004512 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023555 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.035864 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O # loop_ # loop_ # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 TYR 1 1 1 TYR TYR A . n A 1 2 GLY 2 2 2 GLY GLY A . n A 1 3 PRO 3 3 3 PRO PRO A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 GLY 5 5 5 GLY GLY A . n A 1 6 PRO 6 6 6 PRO PRO A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 HYP 13 13 13 HYP HYP A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 PRO 15 15 15 PRO PRO A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 ASP 18 18 18 ASP ASP A . n A 1 19 HYP 19 19 19 HYP HYP A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 HYP 22 22 22 HYP HYP A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 ASP 24 24 24 ASP ASP A . n A 1 25 HYP 25 25 25 HYP HYP A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 PRO 27 27 27 PRO PRO A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 PRO 30 30 30 PRO PRO A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 GLY 32 32 32 GLY GLY A . n B 2 1 TYR 1 1 1 TYR ALA B . n B 2 2 GLY 2 2 2 GLY GLY B . n B 2 3 PRO 3 3 3 PRO PRO B . n B 2 4 ASP 4 4 4 ASP ASP B . n B 2 5 GLY 5 5 5 GLY GLY B . n B 2 6 ASP 6 6 6 ASP ASP B . n B 2 7 HYP 7 7 7 HYP HYP B . n B 2 8 GLY 8 8 8 GLY GLY B . n B 2 9 ASP 9 9 9 ASP ASP B . n B 2 10 HYP 10 10 10 HYP HYP B . n B 2 11 GLY 11 11 11 GLY GLY B . n B 2 12 ASP 12 12 12 ASP ASP B . n B 2 13 HYP 13 13 13 HYP HYP B . n B 2 14 GLY 14 14 14 GLY GLY B . n B 2 15 PRO 15 15 15 PRO PRO B . n B 2 16 ASP 16 16 16 ASP ASP B . n B 2 17 GLY 17 17 17 GLY GLY B . n B 2 18 ARG 18 18 18 ARG ARG B . n B 2 19 HYP 19 19 19 HYP HYP B . n B 2 20 GLY 20 20 20 GLY GLY B . n B 2 21 PRO 21 21 21 PRO PRO B . n B 2 22 ASP 22 22 22 ASP ASP B . n B 2 23 GLY 23 23 23 GLY GLY B . n B 2 24 PRO 24 24 24 PRO PRO B . n B 2 25 ASP 25 25 25 ASP ASP B . n B 2 26 GLY 26 26 26 GLY GLY B . n B 2 27 PRO 27 27 27 PRO PRO B . n B 2 28 ASP 28 28 28 ASP ASP B . n B 2 29 GLY 29 29 29 GLY GLY B . n B 2 30 ASP 30 30 30 ASP ASP B . n B 2 31 HYP 31 31 31 HYP HYP B . n B 2 32 GLY 32 32 32 GLY GLY B . n C 3 1 TYR 1 1 1 TYR TYR C . n C 3 2 GLY 2 2 2 GLY GLY C . n C 3 3 LYS 3 3 3 LYS LYS C . n C 3 4 HYP 4 4 4 HYP HYP C . n C 3 5 GLY 5 5 5 GLY GLY C . n C 3 6 PRO 6 6 6 PRO PRO C . n C 3 7 GLU 7 7 7 GLU GLU C . n C 3 8 GLY 8 8 8 GLY GLY C . n C 3 9 PRO 9 9 9 PRO PRO C . n C 3 10 GLU 10 10 10 GLU GLU C . n C 3 11 GLY 11 11 11 GLY GLY C . n C 3 12 PRO 12 12 12 PRO PRO C . n C 3 13 LYS 13 13 13 LYS LYS C . n C 3 14 GLY 14 14 14 GLY GLY C . n C 3 15 LYS 15 15 15 LYS LYS C . n C 3 16 HYP 16 16 16 HYP HYP C . n C 3 17 GLY 17 17 17 GLY GLY C . n C 3 18 PRO 18 18 18 PRO PRO C . n C 3 19 LYS 19 19 19 LYS LYS C . n C 3 20 GLY 20 20 20 GLY GLY C . n C 3 21 LYS 21 21 21 LYS LYS C . n C 3 22 HYP 22 22 22 HYP HYP C . n C 3 23 GLY 23 23 23 GLY GLY C . n C 3 24 LYS 24 24 24 LYS LYS C . n C 3 25 HYP 25 25 25 HYP HYP C . n C 3 26 GLY 26 26 26 GLY GLY C . n C 3 27 LYS 27 27 27 LYS LYS C . n C 3 28 HYP 28 28 28 HYP HYP C . n C 3 29 GLY 29 29 29 GLY GLY C . n C 3 30 LYS 30 30 30 LYS LYS C . n C 3 31 HYP 31 31 31 HYP HYP C . n C 3 32 GLY 32 32 ? ? ? C . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email fanshilong@mail.tsinghua.edu.cn _pdbx_contact_author.name_first Shilong _pdbx_contact_author.name_last Fan _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-9272-2438 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 HOH 1 101 180 HOH HOH A . D 4 HOH 2 102 117 HOH HOH A . D 4 HOH 3 103 212 HOH HOH A . D 4 HOH 4 104 243 HOH HOH A . D 4 HOH 5 105 188 HOH HOH A . D 4 HOH 6 106 163 HOH HOH A . D 4 HOH 7 107 36 HOH HOH A . D 4 HOH 8 108 109 HOH HOH A . D 4 HOH 9 109 195 HOH HOH A . D 4 HOH 10 110 138 HOH HOH A . D 4 HOH 11 111 194 HOH HOH A . D 4 HOH 12 112 143 HOH HOH A . D 4 HOH 13 113 112 HOH HOH A . D 4 HOH 14 114 133 HOH HOH A . D 4 HOH 15 115 179 HOH HOH A . D 4 HOH 16 116 224 HOH HOH A . D 4 HOH 17 117 61 HOH HOH A . D 4 HOH 18 118 235 HOH HOH A . D 4 HOH 19 119 69 HOH HOH A . D 4 HOH 20 120 174 HOH HOH A . D 4 HOH 21 121 75 HOH HOH A . D 4 HOH 22 122 144 HOH HOH A . D 4 HOH 23 123 119 HOH HOH A . D 4 HOH 24 124 24 HOH HOH A . D 4 HOH 25 125 183 HOH HOH A . D 4 HOH 26 126 27 HOH HOH A . D 4 HOH 27 127 231 HOH HOH A . D 4 HOH 28 128 196 HOH HOH A . D 4 HOH 29 129 32 HOH HOH A . D 4 HOH 30 130 178 HOH HOH A . D 4 HOH 31 131 167 HOH HOH A . D 4 HOH 32 132 150 HOH HOH A . D 4 HOH 33 133 94 HOH HOH A . D 4 HOH 34 134 30 HOH HOH A . D 4 HOH 35 135 89 HOH HOH A . D 4 HOH 36 136 237 HOH HOH A . D 4 HOH 37 137 8 HOH HOH A . D 4 HOH 38 138 83 HOH HOH A . D 4 HOH 39 139 121 HOH HOH A . D 4 HOH 40 140 123 HOH HOH A . D 4 HOH 41 141 86 HOH HOH A . D 4 HOH 42 142 186 HOH HOH A . D 4 HOH 43 143 152 HOH HOH A . D 4 HOH 44 144 92 HOH HOH A . D 4 HOH 45 145 10 HOH HOH A . D 4 HOH 46 146 25 HOH HOH A . D 4 HOH 47 147 115 HOH HOH A . D 4 HOH 48 148 220 HOH HOH A . D 4 HOH 49 149 59 HOH HOH A . D 4 HOH 50 150 33 HOH HOH A . D 4 HOH 51 151 208 HOH HOH A . D 4 HOH 52 152 122 HOH HOH A . D 4 HOH 53 153 95 HOH HOH A . D 4 HOH 54 154 221 HOH HOH A . D 4 HOH 55 155 85 HOH HOH A . D 4 HOH 56 156 216 HOH HOH A . D 4 HOH 57 157 189 HOH HOH A . D 4 HOH 58 158 193 HOH HOH A . D 4 HOH 59 159 136 HOH HOH A . D 4 HOH 60 160 97 HOH HOH A . D 4 HOH 61 161 230 HOH HOH A . D 4 HOH 62 162 4 HOH HOH A . D 4 HOH 63 163 139 HOH HOH A . D 4 HOH 64 164 207 HOH HOH A . D 4 HOH 65 165 67 HOH HOH A . D 4 HOH 66 166 161 HOH HOH A . D 4 HOH 67 167 177 HOH HOH A . D 4 HOH 68 168 185 HOH HOH A . D 4 HOH 69 169 140 HOH HOH A . D 4 HOH 70 170 200 HOH HOH A . D 4 HOH 71 171 184 HOH HOH A . D 4 HOH 72 172 17 HOH HOH A . D 4 HOH 73 173 135 HOH HOH A . D 4 HOH 74 174 111 HOH HOH A . D 4 HOH 75 175 23 HOH HOH A . D 4 HOH 76 176 234 HOH HOH A . D 4 HOH 77 177 106 HOH HOH A . D 4 HOH 78 178 241 HOH HOH A . D 4 HOH 79 179 242 HOH HOH A . E 4 HOH 1 101 40 HOH HOH B . E 4 HOH 2 102 176 HOH HOH B . E 4 HOH 3 103 20 HOH HOH B . E 4 HOH 4 104 12 HOH HOH B . E 4 HOH 5 105 145 HOH HOH B . E 4 HOH 6 106 13 HOH HOH B . E 4 HOH 7 107 41 HOH HOH B . E 4 HOH 8 108 48 HOH HOH B . E 4 HOH 9 109 127 HOH HOH B . E 4 HOH 10 110 65 HOH HOH B . E 4 HOH 11 111 105 HOH HOH B . E 4 HOH 12 112 90 HOH HOH B . E 4 HOH 13 113 80 HOH HOH B . E 4 HOH 14 114 78 HOH HOH B . E 4 HOH 15 115 124 HOH HOH B . E 4 HOH 16 116 54 HOH HOH B . E 4 HOH 17 117 34 HOH HOH B . E 4 HOH 18 118 79 HOH HOH B . E 4 HOH 19 119 99 HOH HOH B . E 4 HOH 20 120 9 HOH HOH B . E 4 HOH 21 121 77 HOH HOH B . E 4 HOH 22 122 57 HOH HOH B . E 4 HOH 23 123 81 HOH HOH B . E 4 HOH 24 124 15 HOH HOH B . E 4 HOH 25 125 209 HOH HOH B . E 4 HOH 26 126 84 HOH HOH B . E 4 HOH 27 127 215 HOH HOH B . E 4 HOH 28 128 169 HOH HOH B . E 4 HOH 29 129 29 HOH HOH B . E 4 HOH 30 130 3 HOH HOH B . E 4 HOH 31 131 11 HOH HOH B . E 4 HOH 32 132 73 HOH HOH B . E 4 HOH 33 133 31 HOH HOH B . E 4 HOH 34 134 14 HOH HOH B . E 4 HOH 35 135 56 HOH HOH B . E 4 HOH 36 136 87 HOH HOH B . E 4 HOH 37 137 70 HOH HOH B . E 4 HOH 38 138 16 HOH HOH B . E 4 HOH 39 139 18 HOH HOH B . E 4 HOH 40 140 107 HOH HOH B . E 4 HOH 41 141 51 HOH HOH B . E 4 HOH 42 142 66 HOH HOH B . E 4 HOH 43 143 46 HOH HOH B . E 4 HOH 44 144 47 HOH HOH B . E 4 HOH 45 145 52 HOH HOH B . E 4 HOH 46 146 149 HOH HOH B . E 4 HOH 47 147 44 HOH HOH B . E 4 HOH 48 148 68 HOH HOH B . E 4 HOH 49 149 76 HOH HOH B . E 4 HOH 50 150 35 HOH HOH B . E 4 HOH 51 151 74 HOH HOH B . E 4 HOH 52 152 39 HOH HOH B . E 4 HOH 53 153 226 HOH HOH B . E 4 HOH 54 154 72 HOH HOH B . E 4 HOH 55 155 162 HOH HOH B . E 4 HOH 56 156 240 HOH HOH B . E 4 HOH 57 157 171 HOH HOH B . E 4 HOH 58 158 225 HOH HOH B . E 4 HOH 59 159 238 HOH HOH B . E 4 HOH 60 160 160 HOH HOH B . E 4 HOH 61 161 154 HOH HOH B . E 4 HOH 62 162 110 HOH HOH B . E 4 HOH 63 163 1 HOH HOH B . E 4 HOH 64 164 205 HOH HOH B . E 4 HOH 65 165 236 HOH HOH B . E 4 HOH 66 166 62 HOH HOH B . E 4 HOH 67 167 38 HOH HOH B . E 4 HOH 68 168 157 HOH HOH B . E 4 HOH 69 169 223 HOH HOH B . E 4 HOH 70 170 22 HOH HOH B . E 4 HOH 71 171 43 HOH HOH B . E 4 HOH 72 172 244 HOH HOH B . E 4 HOH 73 173 218 HOH HOH B . E 4 HOH 74 174 239 HOH HOH B . E 4 HOH 75 175 182 HOH HOH B . E 4 HOH 76 176 148 HOH HOH B . E 4 HOH 77 177 211 HOH HOH B . E 4 HOH 78 179 19 HOH HOH B . E 4 HOH 79 180 42 HOH HOH B . E 4 HOH 80 181 222 HOH HOH B . E 4 HOH 81 182 142 HOH HOH B . E 4 HOH 82 183 128 HOH HOH B . F 4 HOH 1 101 191 HOH HOH C . F 4 HOH 2 102 172 HOH HOH C . F 4 HOH 3 103 159 HOH HOH C . F 4 HOH 4 104 137 HOH HOH C . F 4 HOH 5 105 181 HOH HOH C . F 4 HOH 6 106 108 HOH HOH C . F 4 HOH 7 107 175 HOH HOH C . F 4 HOH 8 108 153 HOH HOH C . F 4 HOH 9 109 26 HOH HOH C . F 4 HOH 10 110 199 HOH HOH C . F 4 HOH 11 111 113 HOH HOH C . F 4 HOH 12 112 131 HOH HOH C . F 4 HOH 13 113 104 HOH HOH C . F 4 HOH 14 114 96 HOH HOH C . F 4 HOH 15 115 88 HOH HOH C . F 4 HOH 16 116 98 HOH HOH C . F 4 HOH 17 117 2 HOH HOH C . F 4 HOH 18 118 155 HOH HOH C . F 4 HOH 19 119 50 HOH HOH C . F 4 HOH 20 120 37 HOH HOH C . F 4 HOH 21 121 64 HOH HOH C . F 4 HOH 22 122 60 HOH HOH C . F 4 HOH 23 123 101 HOH HOH C . F 4 HOH 24 124 197 HOH HOH C . F 4 HOH 25 125 5 HOH HOH C . F 4 HOH 26 126 63 HOH HOH C . F 4 HOH 27 127 229 HOH HOH C . F 4 HOH 28 128 151 HOH HOH C . F 4 HOH 29 129 201 HOH HOH C . F 4 HOH 30 130 91 HOH HOH C . F 4 HOH 31 131 49 HOH HOH C . F 4 HOH 32 132 120 HOH HOH C . F 4 HOH 33 133 93 HOH HOH C . F 4 HOH 34 134 217 HOH HOH C . F 4 HOH 35 135 7 HOH HOH C . F 4 HOH 36 136 126 HOH HOH C . F 4 HOH 37 137 58 HOH HOH C . F 4 HOH 38 138 232 HOH HOH C . F 4 HOH 39 139 156 HOH HOH C . F 4 HOH 40 140 158 HOH HOH C . F 4 HOH 41 141 130 HOH HOH C . F 4 HOH 42 142 53 HOH HOH C . F 4 HOH 43 143 114 HOH HOH C . F 4 HOH 44 144 192 HOH HOH C . F 4 HOH 45 145 166 HOH HOH C . F 4 HOH 46 146 71 HOH HOH C . F 4 HOH 47 147 55 HOH HOH C . F 4 HOH 48 148 125 HOH HOH C . F 4 HOH 49 149 164 HOH HOH C . F 4 HOH 50 150 187 HOH HOH C . F 4 HOH 51 151 210 HOH HOH C . F 4 HOH 52 152 129 HOH HOH C . F 4 HOH 53 153 103 HOH HOH C . F 4 HOH 54 154 206 HOH HOH C . F 4 HOH 55 155 213 HOH HOH C . F 4 HOH 56 156 168 HOH HOH C . F 4 HOH 57 157 118 HOH HOH C . F 4 HOH 58 158 228 HOH HOH C . F 4 HOH 59 159 227 HOH HOH C . F 4 HOH 60 160 214 HOH HOH C . F 4 HOH 61 161 204 HOH HOH C . F 4 HOH 62 162 219 HOH HOH C . F 4 HOH 63 163 173 HOH HOH C . F 4 HOH 64 164 82 HOH HOH C . F 4 HOH 65 165 6 HOH HOH C . F 4 HOH 66 166 190 HOH HOH C . F 4 HOH 67 167 102 HOH HOH C . F 4 HOH 68 168 100 HOH HOH C . F 4 HOH 69 169 202 HOH HOH C . F 4 HOH 70 170 134 HOH HOH C . F 4 HOH 71 171 146 HOH HOH C . F 4 HOH 72 172 147 HOH HOH C . F 4 HOH 73 173 116 HOH HOH C . F 4 HOH 74 174 170 HOH HOH C . F 4 HOH 75 175 233 HOH HOH C . F 4 HOH 76 176 45 HOH HOH C . F 4 HOH 77 177 141 HOH HOH C . F 4 HOH 78 178 28 HOH HOH C . F 4 HOH 79 179 203 HOH HOH C . F 4 HOH 80 180 132 HOH HOH C . F 4 HOH 81 181 21 HOH HOH C . F 4 HOH 82 182 165 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5680 ? 1 MORE -20 ? 1 'SSA (A^2)' 6250 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 160 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-07-12 2 'Structure model' 1 1 2023-07-26 3 'Structure model' 1 2 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 5 # _pdbx_entry_details.entry_id 8GZO _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 CE A LYS 31 ? ? O A HOH 106 ? ? 1.18 2 1 O B HOH 137 ? ? O B HOH 154 ? ? 1.30 3 1 O A HOH 115 ? ? O A HOH 167 ? ? 1.62 4 1 O A HOH 156 ? ? O A HOH 161 ? ? 1.81 5 1 O B HOH 158 ? ? O B HOH 174 ? ? 1.81 6 1 O B HOH 183 ? ? O C HOH 181 ? ? 1.82 7 1 O B HOH 177 ? ? O B HOH 181 ? ? 1.86 8 1 O B HOH 125 ? ? O B HOH 153 ? ? 1.88 9 1 O B HOH 157 ? ? O B HOH 172 ? ? 1.90 10 1 O A HOH 142 ? ? O C HOH 136 ? ? 1.93 11 1 O C HOH 156 ? ? O C HOH 165 ? ? 1.94 12 1 O A HOH 157 ? ? O A HOH 164 ? ? 1.95 13 1 O A HOH 116 ? ? O A HOH 170 ? ? 1.96 14 1 O A HOH 149 ? ? O A HOH 176 ? ? 1.97 15 1 O C HOH 126 ? ? O C HOH 166 ? ? 1.97 16 1 O B HOH 166 ? ? O B HOH 180 ? ? 1.98 17 1 O A ASP 24 ? ? O A HOH 101 ? ? 1.98 18 1 O A HOH 116 ? ? O A HOH 148 ? ? 1.99 19 1 O A HOH 148 ? ? O A HOH 170 ? ? 2.04 20 1 CD A LYS 31 ? ? O A HOH 161 ? ? 2.04 21 1 O B HOH 128 ? ? O C HOH 128 ? ? 2.05 22 1 O A HOH 109 ? ? O A HOH 140 ? ? 2.05 23 1 O B HOH 127 ? ? O B HOH 169 ? ? 2.06 24 1 OD1 A ASP 21 ? ? O A HOH 102 ? ? 2.07 25 1 O C HOH 127 ? ? O C HOH 133 ? ? 2.07 26 1 N A ASP 24 ? ? O A HOH 103 ? ? 2.11 27 1 O B HYP 13 ? ? O B HOH 101 ? ? 2.13 28 1 O A HOH 120 ? ? O C HOH 155 ? ? 2.13 29 1 O C HOH 161 ? ? O C HOH 179 ? ? 2.14 30 1 O A LYS 31 ? ? O A HOH 104 ? ? 2.14 31 1 CB A ASP 21 ? ? O A HOH 109 ? ? 2.14 32 1 O A HOH 136 ? ? O A HOH 179 ? ? 2.14 33 1 O A ASP 24 ? ? O A HOH 103 ? ? 2.15 34 1 O B HOH 101 ? ? O B HOH 103 ? ? 2.15 35 1 O A HOH 131 ? ? O C HOH 105 ? ? 2.15 36 1 CE A LYS 31 ? ? O A HOH 161 ? ? 2.15 37 1 O B HOH 151 ? ? O B HOH 162 ? ? 2.17 38 1 N C GLY 23 ? ? O A HOH 101 ? ? 2.17 39 1 O A HOH 105 ? ? O A HOH 157 ? ? 2.17 40 1 NZ A LYS 4 ? ? O A HOH 105 ? ? 2.19 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O B HOH 173 ? ? 1_555 O C HOH 175 ? ? 3_455 1.81 2 1 O A HOH 176 ? ? 1_555 O B HOH 181 ? ? 2_556 1.92 3 1 O A HOH 153 ? ? 1_555 O A HOH 171 ? ? 2_555 1.92 4 1 O A HOH 161 ? ? 1_555 O A HOH 161 ? ? 2_756 1.99 5 1 O C HOH 105 ? ? 1_555 O C HOH 111 ? ? 3_455 2.03 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B TYR 1 ? CG ? B TYR 1 CG 2 1 Y 1 B TYR 1 ? CD1 ? B TYR 1 CD1 3 1 Y 1 B TYR 1 ? CD2 ? B TYR 1 CD2 4 1 Y 1 B TYR 1 ? CE1 ? B TYR 1 CE1 5 1 Y 1 B TYR 1 ? CE2 ? B TYR 1 CE2 6 1 Y 1 B TYR 1 ? CZ ? B TYR 1 CZ 7 1 Y 1 B TYR 1 ? OH ? B TYR 1 OH # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id C _pdbx_unobs_or_zero_occ_residues.auth_comp_id GLY _pdbx_unobs_or_zero_occ_residues.auth_seq_id 32 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id C _pdbx_unobs_or_zero_occ_residues.label_comp_id GLY _pdbx_unobs_or_zero_occ_residues.label_seq_id 32 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ARG N N N N 1 ARG CA C N S 2 ARG C C N N 3 ARG O O N N 4 ARG CB C N N 5 ARG CG C N N 6 ARG CD C N N 7 ARG NE N N N 8 ARG CZ C N N 9 ARG NH1 N N N 10 ARG NH2 N N N 11 ARG OXT O N N 12 ARG H H N N 13 ARG H2 H N N 14 ARG HA H N N 15 ARG HB2 H N N 16 ARG HB3 H N N 17 ARG HG2 H N N 18 ARG HG3 H N N 19 ARG HD2 H N N 20 ARG HD3 H N N 21 ARG HE H N N 22 ARG HH11 H N N 23 ARG HH12 H N N 24 ARG HH21 H N N 25 ARG HH22 H N N 26 ARG HXT H N N 27 ASP N N N N 28 ASP CA C N S 29 ASP C C N N 30 ASP O O N N 31 ASP CB C N N 32 ASP CG C N N 33 ASP OD1 O N N 34 ASP OD2 O N N 35 ASP OXT O N N 36 ASP H H N N 37 ASP H2 H N N 38 ASP HA H N N 39 ASP HB2 H N N 40 ASP HB3 H N N 41 ASP HD2 H N N 42 ASP HXT H N N 43 GLU N N N N 44 GLU CA C N S 45 GLU C C N N 46 GLU O O N N 47 GLU CB C N N 48 GLU CG C N N 49 GLU CD C N N 50 GLU OE1 O N N 51 GLU OE2 O N N 52 GLU OXT O N N 53 GLU H H N N 54 GLU H2 H N N 55 GLU HA H N N 56 GLU HB2 H N N 57 GLU HB3 H N N 58 GLU HG2 H N N 59 GLU HG3 H N N 60 GLU HE2 H N N 61 GLU HXT H N N 62 GLY N N N N 63 GLY CA C N N 64 GLY C C N N 65 GLY O O N N 66 GLY OXT O N N 67 GLY H H N N 68 GLY H2 H N N 69 GLY HA2 H N N 70 GLY HA3 H N N 71 GLY HXT H N N 72 HOH O O N N 73 HOH H1 H N N 74 HOH H2 H N N 75 HYP N N N N 76 HYP CA C N S 77 HYP C C N N 78 HYP O O N N 79 HYP CB C N N 80 HYP CG C N R 81 HYP CD C N N 82 HYP OD1 O N N 83 HYP OXT O N N 84 HYP H H N N 85 HYP HA H N N 86 HYP HB2 H N N 87 HYP HB3 H N N 88 HYP HG H N N 89 HYP HD22 H N N 90 HYP HD23 H N N 91 HYP HD1 H N N 92 HYP HXT H N N 93 LYS N N N N 94 LYS CA C N S 95 LYS C C N N 96 LYS O O N N 97 LYS CB C N N 98 LYS CG C N N 99 LYS CD C N N 100 LYS CE C N N 101 LYS NZ N N N 102 LYS OXT O N N 103 LYS H H N N 104 LYS H2 H N N 105 LYS HA H N N 106 LYS HB2 H N N 107 LYS HB3 H N N 108 LYS HG2 H N N 109 LYS HG3 H N N 110 LYS HD2 H N N 111 LYS HD3 H N N 112 LYS HE2 H N N 113 LYS HE3 H N N 114 LYS HZ1 H N N 115 LYS HZ2 H N N 116 LYS HZ3 H N N 117 LYS HXT H N N 118 PRO N N N N 119 PRO CA C N S 120 PRO C C N N 121 PRO O O N N 122 PRO CB C N N 123 PRO CG C N N 124 PRO CD C N N 125 PRO OXT O N N 126 PRO H H N N 127 PRO HA H N N 128 PRO HB2 H N N 129 PRO HB3 H N N 130 PRO HG2 H N N 131 PRO HG3 H N N 132 PRO HD2 H N N 133 PRO HD3 H N N 134 PRO HXT H N N 135 TYR N N N N 136 TYR CA C N S 137 TYR C C N N 138 TYR O O N N 139 TYR CB C N N 140 TYR CG C Y N 141 TYR CD1 C Y N 142 TYR CD2 C Y N 143 TYR CE1 C Y N 144 TYR CE2 C Y N 145 TYR CZ C Y N 146 TYR OH O N N 147 TYR OXT O N N 148 TYR H H N N 149 TYR H2 H N N 150 TYR HA H N N 151 TYR HB2 H N N 152 TYR HB3 H N N 153 TYR HD1 H N N 154 TYR HD2 H N N 155 TYR HE1 H N N 156 TYR HE2 H N N 157 TYR HH H N N 158 TYR HXT H N N 159 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ARG N CA sing N N 1 ARG N H sing N N 2 ARG N H2 sing N N 3 ARG CA C sing N N 4 ARG CA CB sing N N 5 ARG CA HA sing N N 6 ARG C O doub N N 7 ARG C OXT sing N N 8 ARG CB CG sing N N 9 ARG CB HB2 sing N N 10 ARG CB HB3 sing N N 11 ARG CG CD sing N N 12 ARG CG HG2 sing N N 13 ARG CG HG3 sing N N 14 ARG CD NE sing N N 15 ARG CD HD2 sing N N 16 ARG CD HD3 sing N N 17 ARG NE CZ sing N N 18 ARG NE HE sing N N 19 ARG CZ NH1 sing N N 20 ARG CZ NH2 doub N N 21 ARG NH1 HH11 sing N N 22 ARG NH1 HH12 sing N N 23 ARG NH2 HH21 sing N N 24 ARG NH2 HH22 sing N N 25 ARG OXT HXT sing N N 26 ASP N CA sing N N 27 ASP N H sing N N 28 ASP N H2 sing N N 29 ASP CA C sing N N 30 ASP CA CB sing N N 31 ASP CA HA sing N N 32 ASP C O doub N N 33 ASP C OXT sing N N 34 ASP CB CG sing N N 35 ASP CB HB2 sing N N 36 ASP CB HB3 sing N N 37 ASP CG OD1 doub N N 38 ASP CG OD2 sing N N 39 ASP OD2 HD2 sing N N 40 ASP OXT HXT sing N N 41 GLU N CA sing N N 42 GLU N H sing N N 43 GLU N H2 sing N N 44 GLU CA C sing N N 45 GLU CA CB sing N N 46 GLU CA HA sing N N 47 GLU C O doub N N 48 GLU C OXT sing N N 49 GLU CB CG sing N N 50 GLU CB HB2 sing N N 51 GLU CB HB3 sing N N 52 GLU CG CD sing N N 53 GLU CG HG2 sing N N 54 GLU CG HG3 sing N N 55 GLU CD OE1 doub N N 56 GLU CD OE2 sing N N 57 GLU OE2 HE2 sing N N 58 GLU OXT HXT sing N N 59 GLY N CA sing N N 60 GLY N H sing N N 61 GLY N H2 sing N N 62 GLY CA C sing N N 63 GLY CA HA2 sing N N 64 GLY CA HA3 sing N N 65 GLY C O doub N N 66 GLY C OXT sing N N 67 GLY OXT HXT sing N N 68 HOH O H1 sing N N 69 HOH O H2 sing N N 70 HYP N CA sing N N 71 HYP N CD sing N N 72 HYP N H sing N N 73 HYP CA C sing N N 74 HYP CA CB sing N N 75 HYP CA HA sing N N 76 HYP C O doub N N 77 HYP C OXT sing N N 78 HYP CB CG sing N N 79 HYP CB HB2 sing N N 80 HYP CB HB3 sing N N 81 HYP CG CD sing N N 82 HYP CG OD1 sing N N 83 HYP CG HG sing N N 84 HYP CD HD22 sing N N 85 HYP CD HD23 sing N N 86 HYP OD1 HD1 sing N N 87 HYP OXT HXT sing N N 88 LYS N CA sing N N 89 LYS N H sing N N 90 LYS N H2 sing N N 91 LYS CA C sing N N 92 LYS CA CB sing N N 93 LYS CA HA sing N N 94 LYS C O doub N N 95 LYS C OXT sing N N 96 LYS CB CG sing N N 97 LYS CB HB2 sing N N 98 LYS CB HB3 sing N N 99 LYS CG CD sing N N 100 LYS CG HG2 sing N N 101 LYS CG HG3 sing N N 102 LYS CD CE sing N N 103 LYS CD HD2 sing N N 104 LYS CD HD3 sing N N 105 LYS CE NZ sing N N 106 LYS CE HE2 sing N N 107 LYS CE HE3 sing N N 108 LYS NZ HZ1 sing N N 109 LYS NZ HZ2 sing N N 110 LYS NZ HZ3 sing N N 111 LYS OXT HXT sing N N 112 PRO N CA sing N N 113 PRO N CD sing N N 114 PRO N H sing N N 115 PRO CA C sing N N 116 PRO CA CB sing N N 117 PRO CA HA sing N N 118 PRO C O doub N N 119 PRO C OXT sing N N 120 PRO CB CG sing N N 121 PRO CB HB2 sing N N 122 PRO CB HB3 sing N N 123 PRO CG CD sing N N 124 PRO CG HG2 sing N N 125 PRO CG HG3 sing N N 126 PRO CD HD2 sing N N 127 PRO CD HD3 sing N N 128 PRO OXT HXT sing N N 129 TYR N CA sing N N 130 TYR N H sing N N 131 TYR N H2 sing N N 132 TYR CA C sing N N 133 TYR CA CB sing N N 134 TYR CA HA sing N N 135 TYR C O doub N N 136 TYR C OXT sing N N 137 TYR CB CG sing N N 138 TYR CB HB2 sing N N 139 TYR CB HB3 sing N N 140 TYR CG CD1 doub Y N 141 TYR CG CD2 sing Y N 142 TYR CD1 CE1 sing Y N 143 TYR CD1 HD1 sing N N 144 TYR CD2 CE2 doub Y N 145 TYR CD2 HD2 sing N N 146 TYR CE1 CZ doub Y N 147 TYR CE1 HE1 sing N N 148 TYR CE2 CZ sing Y N 149 TYR CE2 HE2 sing N N 150 TYR CZ OH sing N N 151 TYR OH HH sing N N 152 TYR OXT HXT sing N N 153 # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id HYP _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id HYP _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5YAN _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'mass spectrometry' _pdbx_struct_assembly_auth_evidence.details ? #