HEADER BIOSYNTHETIC PROTEIN 11-OCT-22 8H52 TITLE CRYSTAL STRUCTURE OF HELICOBACTER PYLORI CARBOXYSPERMIDINE TITLE 2 DEHYDROGENASE IN COMPLEX WITH NADP COMPND MOL_ID: 1; COMPND 2 MOLECULE: SACCHAROPINE DEHYDROGENASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HELICOBACTER PYLORI; SOURCE 3 ORGANISM_TAXID: 102618; SOURCE 4 STRAIN: NCTC 11637 = CCUG 17874 = ATCC 43504 = JCM 12093; SOURCE 5 GENE: NCTC11637_00022; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS CARBOXYSPERMIDINE DEHYDROGENASE, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.Y.KO,S.C.PARK,S.Y.CHO,S.I.YOON REVDAT 3 25-OCT-23 8H52 1 REMARK REVDAT 2 14-JUN-23 8H52 1 COMPND SOURCE DBREF SEQADV REVDAT 1 09-NOV-22 8H52 0 JRNL AUTH K.Y.KO,S.C.PARK,S.Y.CHO,S.I.YOON JRNL TITL STRUCTURAL ANALYSIS OF CARBOXYSPERMIDINE DEHYDROGENASE FROM JRNL TITL 2 HELICOBACTER PYLORI. JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 635 210 2022 JRNL REFN ESSN 1090-2104 JRNL PMID 36283333 JRNL DOI 10.1016/J.BBRC.2022.10.049 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.95 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 22009 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.920 REMARK 3 FREE R VALUE TEST SET COUNT : 1082 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.9500 - 6.1900 1.00 2750 105 0.1715 0.2030 REMARK 3 2 6.1900 - 4.9200 1.00 2647 140 0.1866 0.2144 REMARK 3 3 4.9200 - 4.3000 0.99 2604 113 0.1690 0.2112 REMARK 3 4 4.3000 - 3.9000 0.98 2556 151 0.2099 0.2604 REMARK 3 5 3.9000 - 3.6300 0.99 2578 134 0.2143 0.3003 REMARK 3 6 3.6300 - 3.4100 1.00 2607 140 0.2443 0.2984 REMARK 3 7 3.4100 - 3.2400 1.00 2571 157 0.2719 0.3446 REMARK 3 8 3.2400 - 3.1000 1.00 2614 142 0.3174 0.3351 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.426 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.823 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 81.47 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 88.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3155 REMARK 3 ANGLE : 1.068 4304 REMARK 3 CHIRALITY : 0.055 484 REMARK 3 PLANARITY : 0.006 555 REMARK 3 DIHEDRAL : 20.014 1843 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.5331 5.7365 -24.0663 REMARK 3 T TENSOR REMARK 3 T11: 1.3890 T22: 0.0813 REMARK 3 T33: 1.3305 T12: -0.2896 REMARK 3 T13: 1.2244 T23: 0.3040 REMARK 3 L TENSOR REMARK 3 L11: 0.6008 L22: 1.6204 REMARK 3 L33: 0.9439 L12: 0.2393 REMARK 3 L13: -0.2202 L23: -0.7664 REMARK 3 S TENSOR REMARK 3 S11: 0.5611 S12: 0.0256 S13: 0.6570 REMARK 3 S21: -0.0721 S22: 0.2752 S23: 0.2023 REMARK 3 S31: -0.7727 S32: -0.1701 S33: 0.0390 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 23 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.5312 9.3739 -19.5686 REMARK 3 T TENSOR REMARK 3 T11: 1.3865 T22: 0.6061 REMARK 3 T33: 1.5304 T12: -0.1138 REMARK 3 T13: 0.6724 T23: -0.1700 REMARK 3 L TENSOR REMARK 3 L11: 0.7606 L22: 1.4612 REMARK 3 L33: 1.3681 L12: 0.3498 REMARK 3 L13: -0.6105 L23: -1.3667 REMARK 3 S TENSOR REMARK 3 S11: 0.6230 S12: -0.5656 S13: 0.6740 REMARK 3 S21: 0.2936 S22: 0.3315 S23: -0.3819 REMARK 3 S31: -0.6322 S32: 0.4504 S33: -0.3308 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.0686 15.5090 -24.8545 REMARK 3 T TENSOR REMARK 3 T11: 1.7634 T22: 0.2157 REMARK 3 T33: 1.9141 T12: -0.0111 REMARK 3 T13: 1.0295 T23: 0.4009 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.7374 REMARK 3 L33: 0.0125 L12: 0.0467 REMARK 3 L13: 0.0021 L23: 0.1532 REMARK 3 S TENSOR REMARK 3 S11: 0.1495 S12: 0.0507 S13: 1.4330 REMARK 3 S21: -0.3100 S22: 0.2120 S23: -0.4322 REMARK 3 S31: -1.3168 S32: -0.0453 S33: -0.0835 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 86 THROUGH 145 ) REMARK 3 ORIGIN FOR THE GROUP (A): -43.8489 6.8040 -30.4637 REMARK 3 T TENSOR REMARK 3 T11: 1.4757 T22: 0.6655 REMARK 3 T33: 1.3599 T12: 0.7127 REMARK 3 T13: 0.6475 T23: 0.7689 REMARK 3 L TENSOR REMARK 3 L11: 1.7095 L22: 3.1179 REMARK 3 L33: 0.7067 L12: -1.3734 REMARK 3 L13: 1.0935 L23: -0.5654 REMARK 3 S TENSOR REMARK 3 S11: 0.4508 S12: 0.1066 S13: 1.2943 REMARK 3 S21: -0.3541 S22: -0.3332 S23: 0.5475 REMARK 3 S31: -1.4053 S32: -1.2996 S33: -0.4839 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 146 THROUGH 184 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.3685 -13.1077 -26.4451 REMARK 3 T TENSOR REMARK 3 T11: 0.5991 T22: 0.7248 REMARK 3 T33: 0.5851 T12: 0.1556 REMARK 3 T13: 0.1643 T23: 0.2051 REMARK 3 L TENSOR REMARK 3 L11: 1.5864 L22: 1.0186 REMARK 3 L33: 1.8554 L12: -0.1509 REMARK 3 L13: -1.0652 L23: -0.5684 REMARK 3 S TENSOR REMARK 3 S11: 0.2346 S12: 0.3194 S13: 0.2208 REMARK 3 S21: 0.0078 S22: 0.0174 S23: 0.2281 REMARK 3 S31: -0.3612 S32: -0.3097 S33: -0.1381 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 185 THROUGH 231 ) REMARK 3 ORIGIN FOR THE GROUP (A): -48.1620 -14.1962 -20.8081 REMARK 3 T TENSOR REMARK 3 T11: 0.6259 T22: 0.9022 REMARK 3 T33: 0.8521 T12: 0.1867 REMARK 3 T13: 0.2579 T23: 0.2148 REMARK 3 L TENSOR REMARK 3 L11: 2.1842 L22: 1.8162 REMARK 3 L33: 2.0595 L12: -0.2160 REMARK 3 L13: -1.0203 L23: -0.0549 REMARK 3 S TENSOR REMARK 3 S11: 0.1208 S12: 0.8938 S13: 0.3453 REMARK 3 S21: 0.1226 S22: 0.0034 S23: 0.6973 REMARK 3 S31: -0.5306 S32: -0.8865 S33: -0.1577 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 232 THROUGH 267 ) REMARK 3 ORIGIN FOR THE GROUP (A): -47.7798 -11.8355 -20.6249 REMARK 3 T TENSOR REMARK 3 T11: 0.6345 T22: 0.8253 REMARK 3 T33: 0.7504 T12: 0.2067 REMARK 3 T13: 0.2116 T23: 0.1986 REMARK 3 L TENSOR REMARK 3 L11: 1.9866 L22: 1.6880 REMARK 3 L33: 4.3932 L12: -0.3974 REMARK 3 L13: -0.8762 L23: 0.2512 REMARK 3 S TENSOR REMARK 3 S11: 0.3452 S12: 0.6586 S13: 0.1707 REMARK 3 S21: 0.1845 S22: -0.1591 S23: 0.2743 REMARK 3 S31: -0.1301 S32: -1.1774 S33: -0.1944 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 268 THROUGH 291 ) REMARK 3 ORIGIN FOR THE GROUP (A): -50.2481 6.2944 -4.1176 REMARK 3 T TENSOR REMARK 3 T11: 1.4437 T22: 0.5487 REMARK 3 T33: 1.2831 T12: 0.0924 REMARK 3 T13: 0.7027 T23: 0.0136 REMARK 3 L TENSOR REMARK 3 L11: 0.4233 L22: 0.2995 REMARK 3 L33: 0.1107 L12: -0.3147 REMARK 3 L13: -0.1168 L23: 0.1530 REMARK 3 S TENSOR REMARK 3 S11: 0.5786 S12: -0.3058 S13: 0.8823 REMARK 3 S21: 0.8401 S22: 0.3791 S23: 0.5261 REMARK 3 S31: -1.2639 S32: -0.2521 S33: -0.2998 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 292 THROUGH 359 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.4447 -10.8153 -24.1860 REMARK 3 T TENSOR REMARK 3 T11: 0.5659 T22: 0.5173 REMARK 3 T33: 0.5594 T12: 0.0464 REMARK 3 T13: 0.2058 T23: 0.1255 REMARK 3 L TENSOR REMARK 3 L11: 2.8380 L22: 2.0062 REMARK 3 L33: 1.9356 L12: 0.1642 REMARK 3 L13: -1.1156 L23: -0.4577 REMARK 3 S TENSOR REMARK 3 S11: 0.3567 S12: 0.0256 S13: 0.5613 REMARK 3 S21: 0.0613 S22: 0.0712 S23: 0.1114 REMARK 3 S31: -0.5817 S32: 0.1803 S33: -0.3479 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 360 THROUGH 399 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.6155 -5.7305 -37.6529 REMARK 3 T TENSOR REMARK 3 T11: 0.8916 T22: 0.7588 REMARK 3 T33: 0.7374 T12: 0.2577 REMARK 3 T13: 0.2994 T23: 0.2525 REMARK 3 L TENSOR REMARK 3 L11: 1.9900 L22: 2.7354 REMARK 3 L33: 2.0386 L12: -0.7517 REMARK 3 L13: 0.9271 L23: -1.5258 REMARK 3 S TENSOR REMARK 3 S11: 0.3944 S12: 0.7695 S13: 0.4635 REMARK 3 S21: -0.6667 S22: -0.1209 S23: -0.0933 REMARK 3 S31: -0.7345 S32: -0.2624 S33: -0.1994 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8H52 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-OCT-22. REMARK 100 THE DEPOSITION ID IS D_1300032830. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-MAR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22284 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 15.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 8H4Z REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 81.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 6.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, NACL, BIS-TRIS, PH REMARK 280 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y,-Z REMARK 290 16555 X,-Y,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z,-X,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y REMARK 290 20555 -Z+1/2,X,-Y REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z,-X REMARK 290 23555 Y,-Z,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 97.03850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 97.03850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 97.03850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 97.03850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 97.03850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 97.03850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 97.03850 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 97.03850 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 97.03850 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 97.03850 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 97.03850 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 97.03850 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 97.03850 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 97.03850 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 97.03850 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 97.03850 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 97.03850 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 97.03850 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 97.03850 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 97.03850 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 97.03850 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 97.03850 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 97.03850 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 97.03850 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 97.03850 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 97.03850 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 97.03850 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 97.03850 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 97.03850 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 97.03850 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 97.03850 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 97.03850 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 97.03850 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 97.03850 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 97.03850 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 97.03850 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -97.03850 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -5 REMARK 465 SER A -4 REMARK 465 HIS A -3 REMARK 465 MET A -2 REMARK 465 ALA A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 3 OG1 CG2 REMARK 470 ARG A 24 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 28 CG CD CE NZ REMARK 470 ILE A 30 CG1 CG2 CD1 REMARK 470 ILE A 31 CG1 CG2 CD1 REMARK 470 LYS A 44 CG CD CE NZ REMARK 470 GLU A 45 CG CD OE1 OE2 REMARK 470 VAL A 57 CG1 CG2 REMARK 470 GLU A 58 CG CD OE1 OE2 REMARK 470 GLN A 66 CG CD OE1 NE2 REMARK 470 LYS A 76 CG CD CE NZ REMARK 470 LYS A 78 CG CD CE NZ REMARK 470 VAL A 79 CG1 CG2 REMARK 470 GLU A 98 CG CD OE1 OE2 REMARK 470 LYS A 100 CG CD CE NZ REMARK 470 LYS A 116 CG CD CE NZ REMARK 470 ARG A 127 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 130 CG CD CE NZ REMARK 470 ARG A 133 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 137 CG1 CG2 REMARK 470 LYS A 176 CG CD CE NZ REMARK 470 LYS A 195 CG CD CE NZ REMARK 470 LYS A 203 CG CD CE NZ REMARK 470 LYS A 208 CG CD CE NZ REMARK 470 LYS A 242 CG CD CE NZ REMARK 470 LYS A 273 CG CD CE NZ REMARK 470 GLU A 276 CG CD OE1 OE2 REMARK 470 LYS A 281 CE NZ REMARK 470 LYS A 300 CG CD CE NZ REMARK 470 ILE A 315 CD1 REMARK 470 HIS A 367 CG ND1 CD2 CE1 NE2 REMARK 470 PHE A 368 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG A 369 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 399 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 23 66.95 -106.33 REMARK 500 VAL A 60 149.10 -170.25 REMARK 500 ALA A 62 -8.61 -55.44 REMARK 500 LYS A 76 80.42 34.35 REMARK 500 ASN A 108 171.73 -55.53 REMARK 500 ALA A 115 61.40 -100.06 REMARK 500 ALA A 140 54.61 -115.59 REMARK 500 PHE A 183 -155.73 -127.95 REMARK 500 ILE A 221 -77.29 -124.57 REMARK 500 ASN A 318 41.88 35.48 REMARK 500 ASP A 361 11.57 53.87 REMARK 500 HIS A 367 35.48 80.21 REMARK 500 PHE A 368 174.09 175.56 REMARK 500 LEU A 392 56.35 -119.07 REMARK 500 REMARK 500 REMARK: NULL DBREF1 8H52 A 1 399 UNP A0A2X5A3P4_HELPX DBREF2 8H52 A A0A2X5A3P4 1 399 SEQADV 8H52 GLY A -5 UNP A0A2X5A3P EXPRESSION TAG SEQADV 8H52 SER A -4 UNP A0A2X5A3P EXPRESSION TAG SEQADV 8H52 HIS A -3 UNP A0A2X5A3P EXPRESSION TAG SEQADV 8H52 MET A -2 UNP A0A2X5A3P EXPRESSION TAG SEQADV 8H52 ALA A -1 UNP A0A2X5A3P EXPRESSION TAG SEQADV 8H52 SER A 0 UNP A0A2X5A3P EXPRESSION TAG SEQRES 1 A 405 GLY SER HIS MET ALA SER MET HIS THR VAL LEU GLN ILE SEQRES 2 A 405 GLY ALA GLY GLY VAL GLY SER VAL VAL ALA HIS LYS MET SEQRES 3 A 405 GLY MET ASN ARG ASP VAL PHE LYS ASN ILE ILE LEU ALA SEQRES 4 A 405 SER ARG SER LEU ASP LYS CYS TYR ALA ILE LYS GLU SER SEQRES 5 A 405 MET LEU LYS LYS GLY LEU GLY GLU ILE GLY VAL GLU GLN SEQRES 6 A 405 VAL ASP ALA ASP ASP THR GLN ALA LEU VAL ALA LEU ILE SEQRES 7 A 405 GLN LYS TYR LYS PRO LYS VAL VAL ILE ASN VAL ALA LEU SEQRES 8 A 405 PRO TYR GLN ASP LEU THR ILE MET GLN ALA CYS LEU GLU SEQRES 9 A 405 THR LYS THR HIS TYR ILE ASP THR ALA ASN TYR GLU HIS SEQRES 10 A 405 PRO ASP LEU ALA LYS PHE GLU TYR LYS GLU GLN TRP ALA SEQRES 11 A 405 PHE ASP ARG ALA TYR LYS GLU ALA ARG ILE LEU GLY VAL SEQRES 12 A 405 LEU GLY ALA GLY PHE ASP PRO GLY VAL THR ASN ALA TYR SEQRES 13 A 405 VAL ALA HIS ALA GLN ARG HIS HIS PHE ASP THR ILE HIS SEQRES 14 A 405 THR LEU ASP ILE LEU ASP CYS ASN ALA GLY ASP HIS LYS SEQRES 15 A 405 ARG PRO PHE ALA THR ASN PHE ASN PRO GLU ILE ASN LEU SEQRES 16 A 405 ARG GLU VAL SER SER LYS GLY ARG TYR TYR GLU ASN GLY SEQRES 17 A 405 LYS TRP ILE GLU THR LYS PRO LEU GLU ILE LYS GLN VAL SEQRES 18 A 405 TRP ALA TYR PRO GLN ILE GLY GLU MET ASP SER TYR LEU SEQRES 19 A 405 LEU TYR HIS GLU GLU LEU GLU SER LEU VAL LYS ASN ILE SEQRES 20 A 405 LYS GLY LEU ARG ARG ALA ARG PHE PHE MET THR PHE SER SEQRES 21 A 405 GLN ASN TYR LEU THR HIS MET LYS CYS LEU GLU ASN VAL SEQRES 22 A 405 GLY MET LEU GLY ILE LYS GLU ILE GLU HIS GLN GLY VAL SEQRES 23 A 405 LYS ILE VAL PRO ILE GLN PHE LEU LYS THR LEU LEU PRO SEQRES 24 A 405 ASP PRO ALA THR LEU ALA LYS ASP THR THR GLY LYS THR SEQRES 25 A 405 ASN ILE GLY CYS TYR MET THR GLY ILE LYS ASN ASN GLN SEQRES 26 A 405 ASP LYS THR LEU TYR ILE TYR ASN VAL CYS ASP HIS LYS SEQRES 27 A 405 LYS CYS TYR GLU GLU VAL GLY SER GLN ALA ILE SER TYR SEQRES 28 A 405 THR THR GLY VAL PRO ALA MET CYS ALA ALA LYS MET ILE SEQRES 29 A 405 CYS ASN ASP THR TRP SER ALA ASP HIS PHE ARG ALA GLY SEQRES 30 A 405 VAL PHE ASN ILE GLU GLU LEU ASN THR ASP PRO PHE MET SEQRES 31 A 405 GLU GLU LEU ILE LYS GLN GLY LEU PRO TYR GLU VAL ILE SEQRES 32 A 405 GLU ARG HET NAP A 501 48 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 2 NAP C21 H28 N7 O17 P3 HELIX 1 AA1 GLY A 10 ASN A 23 1 14 HELIX 2 AA2 SER A 36 GLY A 51 1 16 HELIX 3 AA3 ASP A 64 LYS A 76 1 13 HELIX 4 AA4 LEU A 85 TYR A 87 5 3 HELIX 5 AA5 GLN A 88 THR A 99 1 12 HELIX 6 AA6 TYR A 119 ALA A 124 1 6 HELIX 7 AA7 PHE A 125 ALA A 132 1 8 HELIX 8 AA8 GLY A 145 HIS A 158 1 14 HELIX 9 AA9 ASN A 184 SER A 193 1 10 HELIX 10 AB1 HIS A 231 ILE A 241 1 11 HELIX 11 AB2 SER A 254 GLY A 268 1 15 HELIX 12 AB3 VAL A 283 LEU A 292 1 10 HELIX 13 AB4 ASP A 294 THR A 302 5 9 HELIX 14 AB5 HIS A 331 GLY A 339 1 9 HELIX 15 AB6 GLN A 341 ASN A 360 1 20 HELIX 16 AB7 GLU A 376 LEU A 378 5 3 HELIX 17 AB8 THR A 380 GLN A 390 1 11 SHEET 1 AA1 7 GLY A 56 VAL A 57 0 SHEET 2 AA1 7 ASN A 29 ALA A 33 1 N LEU A 32 O GLY A 56 SHEET 3 AA1 7 THR A 3 ILE A 7 1 N GLN A 6 O ALA A 33 SHEET 4 AA1 7 VAL A 79 ASN A 82 1 O ILE A 81 N ILE A 7 SHEET 5 AA1 7 HIS A 102 ASP A 105 1 O HIS A 102 N VAL A 80 SHEET 6 AA1 7 LEU A 135 LEU A 138 1 O LEU A 135 N TYR A 103 SHEET 7 AA1 7 GLY A 371 ASN A 374 1 O PHE A 373 N LEU A 138 SHEET 1 AA2 5 LYS A 203 GLU A 206 0 SHEET 2 AA2 5 ARG A 197 GLU A 200 -1 N TYR A 198 O ILE A 205 SHEET 3 AA2 5 ARG A 246 THR A 252 -1 O ALA A 247 N TYR A 199 SHEET 4 AA2 5 GLY A 222 LEU A 229 -1 N TYR A 227 O MET A 251 SHEET 5 AA2 5 LYS A 213 TYR A 218 -1 N GLN A 214 O SER A 226 SHEET 1 AA3 7 LYS A 203 GLU A 206 0 SHEET 2 AA3 7 ARG A 197 GLU A 200 -1 N TYR A 198 O ILE A 205 SHEET 3 AA3 7 ARG A 246 THR A 252 -1 O ALA A 247 N TYR A 199 SHEET 4 AA3 7 THR A 161 ASN A 171 1 N ILE A 167 O PHE A 250 SHEET 5 AA3 7 LYS A 305 ILE A 315 -1 O TYR A 311 N ASP A 166 SHEET 6 AA3 7 ASP A 320 ASP A 330 -1 O ILE A 325 N CYS A 310 SHEET 7 AA3 7 GLU A 395 ARG A 399 -1 O GLU A 395 N TYR A 326 SHEET 1 AA4 2 ILE A 275 HIS A 277 0 SHEET 2 AA4 2 VAL A 280 ILE A 282 -1 O VAL A 280 N HIS A 277 CISPEP 1 ASP A 143 PRO A 144 0 9.34 CRYST1 194.077 194.077 194.077 90.00 90.00 90.00 I 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005153 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005153 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005153 0.00000