HEADER TRANSFERASE 19-OCT-22 8H75 TITLE FGFR2 IN COMPLEX WITH YJ001 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FIBROBLAST GROWTH FACTOR RECEPTOR 2; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: FGFR-2,K-SAM,KGFR,KERATINOCYTE GROWTH FACTOR RECEPTOR; COMPND 5 EC: 2.7.10.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FGFR2, BEK, KGFR, KSAM; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FGFR2, KINASE, YJ001, COMPLEX, INHIBITOR, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR X.E.YAN,C.H.YUN REVDAT 3 15-NOV-23 8H75 1 REMARK REVDAT 2 08-NOV-23 8H75 1 COMPND HETNAM HETSYN REVDAT 1 25-OCT-23 8H75 0 JRNL AUTH X.E.YAN,C.H.YUN JRNL TITL FGFR2 IN COMPLEX WITH YJ001 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.80 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 70.6 REMARK 3 NUMBER OF REFLECTIONS : 16042 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.740 REMARK 3 FREE R VALUE TEST SET COUNT : 560 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 27.8000 - 8.2700 0.95 1786 182 0.2089 0.2093 REMARK 3 2 8.2700 - 6.5900 1.00 1858 205 0.2426 0.2426 REMARK 3 3 6.5900 - 5.7700 0.99 1879 202 0.2491 0.2778 REMARK 3 4 5.7700 - 5.2400 0.93 1707 188 0.2361 0.2467 REMARK 3 5 5.2400 - 4.8700 0.85 1570 170 0.2027 0.2388 REMARK 3 6 4.8700 - 4.5900 0.74 1400 153 0.1834 0.2252 REMARK 3 7 4.5900 - 4.3600 0.65 1197 127 0.1791 0.1941 REMARK 3 8 4.3600 - 4.1700 0.58 1114 118 0.1831 0.2483 REMARK 3 9 4.1700 - 4.0100 0.52 966 102 0.2094 0.2429 REMARK 3 10 4.0100 - 3.8700 0.46 422 47 0.2275 0.2848 REMARK 3 11 3.8700 - 3.7500 0.31 580 69 0.2726 0.3112 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.402 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.215 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 49.99 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 61.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 8955 REMARK 3 ANGLE : 1.777 12133 REMARK 3 CHIRALITY : 0.142 1346 REMARK 3 PLANARITY : 0.009 1539 REMARK 3 DIHEDRAL : 25.113 3306 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8H75 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-OCT-22. REMARK 100 THE DEPOSITION ID IS D_1300032954. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-DEC-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16042 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.740 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.3 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.74 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.94 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1OEC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M (NH4)2SO4, 0.1M BIS-TRIS PH6.0, REMARK 280 25% PEG3350., VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 99.29750 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 457 REMARK 465 HIS A 458 REMARK 465 MET A 459 REMARK 465 LEU A 460 REMARK 465 ALA A 461 REMARK 465 GLY A 462 REMARK 465 VAL A 463 REMARK 465 SER A 464 REMARK 465 GLU A 465 REMARK 465 TYR A 466 REMARK 465 PRO A 582 REMARK 465 GLY A 583 REMARK 465 MET A 584 REMARK 465 GLU A 585 REMARK 465 TYR A 586 REMARK 465 SER A 587 REMARK 465 TYR A 588 REMARK 465 ASP A 589 REMARK 465 ILE A 590 REMARK 465 ASN A 591 REMARK 465 ARG A 592 REMARK 465 VAL A 593 REMARK 465 PRO A 594 REMARK 465 GLU A 595 REMARK 465 ASN A 766 REMARK 465 GLU A 767 REMARK 465 GLU A 768 REMARK 465 GLY B 457 REMARK 465 HIS B 458 REMARK 465 MET B 459 REMARK 465 LEU B 460 REMARK 465 ALA B 461 REMARK 465 GLY B 462 REMARK 465 VAL B 463 REMARK 465 SER B 464 REMARK 465 GLU B 465 REMARK 465 TYR B 466 REMARK 465 PRO B 581 REMARK 465 PRO B 582 REMARK 465 GLY B 583 REMARK 465 MET B 584 REMARK 465 GLU B 585 REMARK 465 TYR B 586 REMARK 465 SER B 587 REMARK 465 TYR B 588 REMARK 465 ASP B 589 REMARK 465 ILE B 590 REMARK 465 ASN B 591 REMARK 465 ARG B 592 REMARK 465 VAL B 593 REMARK 465 PRO B 594 REMARK 465 GLU B 595 REMARK 465 THR B 765 REMARK 465 ASN B 766 REMARK 465 GLU B 767 REMARK 465 GLU B 768 REMARK 465 GLY C 457 REMARK 465 HIS C 458 REMARK 465 MET C 459 REMARK 465 LEU C 460 REMARK 465 ALA C 461 REMARK 465 GLY C 462 REMARK 465 VAL C 463 REMARK 465 SER C 464 REMARK 465 GLU C 465 REMARK 465 TYR C 466 REMARK 465 ASP C 504 REMARK 465 LYS C 505 REMARK 465 ASP C 506 REMARK 465 GLY C 583 REMARK 465 MET C 584 REMARK 465 GLU C 585 REMARK 465 TYR C 586 REMARK 465 SER C 587 REMARK 465 TYR C 588 REMARK 465 ASP C 589 REMARK 465 ILE C 590 REMARK 465 ASN C 591 REMARK 465 ARG C 592 REMARK 465 VAL C 593 REMARK 465 PRO C 594 REMARK 465 GLU C 595 REMARK 465 ASN C 652 REMARK 465 ASN C 653 REMARK 465 ILE C 654 REMARK 465 ASP C 655 REMARK 465 PTR C 656 REMARK 465 TYR C 657 REMARK 465 THR C 764 REMARK 465 THR C 765 REMARK 465 ASN C 766 REMARK 465 GLU C 767 REMARK 465 GLU C 768 REMARK 465 GLY D 457 REMARK 465 HIS D 458 REMARK 465 MET D 459 REMARK 465 LEU D 460 REMARK 465 ALA D 461 REMARK 465 GLY D 462 REMARK 465 VAL D 463 REMARK 465 SER D 464 REMARK 465 GLU D 465 REMARK 465 TYR D 466 REMARK 465 LYS D 505 REMARK 465 ASP D 506 REMARK 465 PRO D 581 REMARK 465 PRO D 582 REMARK 465 GLY D 583 REMARK 465 MET D 584 REMARK 465 GLU D 585 REMARK 465 TYR D 586 REMARK 465 SER D 587 REMARK 465 TYR D 588 REMARK 465 ASP D 589 REMARK 465 ILE D 590 REMARK 465 ASN D 591 REMARK 465 ARG D 592 REMARK 465 VAL D 593 REMARK 465 PRO D 594 REMARK 465 GLU D 595 REMARK 465 ASN D 653 REMARK 465 ILE D 654 REMARK 465 ASP D 655 REMARK 465 PTR D 656 REMARK 465 THR D 765 REMARK 465 ASN D 766 REMARK 465 GLU D 767 REMARK 465 GLU D 768 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 467 CG CD OE1 OE2 REMARK 470 LYS A 473 CG CD CE NZ REMARK 470 ARG A 478 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 489 CG CD OE1 OE2 REMARK 470 CYS A 491 SG REMARK 470 PHE A 492 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP A 504 CG OD1 OD2 REMARK 470 LYS A 505 CG CD CE NZ REMARK 470 ASP A 506 CG OD1 OD2 REMARK 470 LYS A 507 CG CD CE NZ REMARK 470 LYS A 509 CG CD CE NZ REMARK 470 GLU A 510 CG CD OE1 OE2 REMARK 470 LYS A 539 CG CD CE NZ REMARK 470 GLU A 596 CB CG CD OE1 OE2 REMARK 470 GLN A 597 CB CG CD OE1 NE2 REMARK 470 LYS A 601 CG CD CE NZ REMARK 470 TYR A 608 OH REMARK 470 ILE A 654 CG1 CG2 CD1 REMARK 470 LYS A 659 CG CD CE NZ REMARK 470 LYS A 668 NZ REMARK 470 MET A 734 CG SD CE REMARK 470 ARG A 747 NH1 REMARK 470 GLU B 475 OE2 REMARK 470 ARG B 478 CZ NH1 NH2 REMARK 470 CYS B 491 SG REMARK 470 PHE B 492 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 507 CG CD CE NZ REMARK 470 LYS B 509 CG CD CE NZ REMARK 470 GLU B 510 CG CD OE1 OE2 REMARK 470 LYS B 520 CG CD CE NZ REMARK 470 GLU B 525 CG CD OE1 OE2 REMARK 470 ASP B 527 OD2 REMARK 470 LYS B 539 CG CD CE NZ REMARK 470 GLU B 565 CG CD OE1 OE2 REMARK 470 GLU B 596 CB CG CD OE1 OE2 REMARK 470 GLN B 597 CB CG CD OE1 NE2 REMARK 470 LYS B 659 CG CD CE NZ REMARK 470 THR B 661 OG1 CG2 REMARK 470 ASN B 662 CG OD1 ND2 REMARK 470 ARG B 664 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 724 CE NZ REMARK 470 ASN B 730 ND2 REMARK 470 GLU C 475 CD OE1 OE2 REMARK 470 ARG C 478 NH1 REMARK 470 LYS C 485 CG CD CE NZ REMARK 470 LEU C 487 CG CD1 CD2 REMARK 470 CYS C 491 SG REMARK 470 PHE C 492 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ILE C 503 CG1 CG2 CD1 REMARK 470 LYS C 507 CG CD CE NZ REMARK 470 LYS C 509 CG CD CE NZ REMARK 470 GLU C 510 CG CD OE1 OE2 REMARK 470 GLU C 525 CG CD OE1 OE2 REMARK 470 GLN C 556 CG CD OE1 NE2 REMARK 470 GLU C 596 CG CD OE1 OE2 REMARK 470 GLN C 597 CG CD OE1 NE2 REMARK 470 TYR C 616 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU C 636 CG CD OE1 OE2 REMARK 470 MET C 640 CG SD CE REMARK 470 LYS C 658 CG CD CE NZ REMARK 470 LYS C 659 CG CD CE NZ REMARK 470 THR C 660 OG1 CG2 REMARK 470 ASN C 662 CG OD1 ND2 REMARK 470 GLU C 673 CG CD OE1 OE2 REMARK 470 PHE C 676 CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR C 680 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU C 695 OE1 OE2 REMARK 470 LYS C 717 CG CD CE NZ REMARK 470 TYR C 733 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG D 478 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 485 CG CD CE NZ REMARK 470 CYS D 491 SG REMARK 470 LYS D 507 CG CD CE NZ REMARK 470 LYS D 509 CG CD CE NZ REMARK 470 GLU D 510 CG CD OE1 OE2 REMARK 470 GLU D 596 CB CG CD OE1 OE2 REMARK 470 GLN D 597 CB CG CD OE1 NE2 REMARK 470 ARG D 612 NH1 NH2 REMARK 470 GLU D 615 CG CD OE1 OE2 REMARK 470 TYR D 616 OH REMARK 470 LYS D 658 CG CD CE NZ REMARK 470 LYS D 659 CG CD CE NZ REMARK 470 THR D 660 OG1 CG2 REMARK 470 ARG D 678 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 695 OE1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 506 5.99 83.63 REMARK 500 ASP A 626 59.54 -91.79 REMARK 500 ARG A 664 72.34 -162.98 REMARK 500 THR A 698 44.42 -101.19 REMARK 500 PRO B 469 -154.79 -83.40 REMARK 500 ASP B 506 53.58 -151.80 REMARK 500 LEU B 610 -6.61 -57.38 REMARK 500 ARG B 625 -2.73 75.93 REMARK 500 ASN B 637 10.80 86.31 REMARK 500 ARG B 678 16.38 82.98 REMARK 500 THR B 698 45.40 -104.52 REMARK 500 ASP C 522 86.36 -67.14 REMARK 500 THR C 555 -129.56 61.71 REMARK 500 ALA C 578 23.07 -78.13 REMARK 500 ARG C 579 48.23 -143.18 REMARK 500 SER C 619 -2.02 78.58 REMARK 500 ASP C 626 73.79 -155.88 REMARK 500 GLU C 636 141.81 -39.65 REMARK 500 PHE C 645 7.40 -68.52 REMARK 500 ASP D 626 -80.15 -125.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 PTR A 656 -17.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1104 DISTANCE = 6.90 ANGSTROMS REMARK 525 HOH C1106 DISTANCE = 6.20 ANGSTROMS DBREF 8H75 A 459 768 UNP P21802 FGFR2_HUMAN 347 656 DBREF 8H75 B 459 768 UNP P21802 FGFR2_HUMAN 347 656 DBREF 8H75 C 459 768 UNP P21802 FGFR2_HUMAN 347 656 DBREF 8H75 D 459 768 UNP P21802 FGFR2_HUMAN 347 656 SEQADV 8H75 GLY A 457 UNP P21802 EXPRESSION TAG SEQADV 8H75 HIS A 458 UNP P21802 EXPRESSION TAG SEQADV 8H75 GLY B 457 UNP P21802 EXPRESSION TAG SEQADV 8H75 HIS B 458 UNP P21802 EXPRESSION TAG SEQADV 8H75 GLY C 457 UNP P21802 EXPRESSION TAG SEQADV 8H75 HIS C 458 UNP P21802 EXPRESSION TAG SEQADV 8H75 GLY D 457 UNP P21802 EXPRESSION TAG SEQADV 8H75 HIS D 458 UNP P21802 EXPRESSION TAG SEQRES 1 A 312 GLY HIS MET LEU ALA GLY VAL SER GLU TYR GLU LEU PRO SEQRES 2 A 312 GLU ASP PRO LYS TRP GLU PHE PRO ARG ASP LYS LEU THR SEQRES 3 A 312 LEU GLY LYS PRO LEU GLY GLU GLY CYS PHE GLY GLN VAL SEQRES 4 A 312 VAL MET ALA GLU ALA VAL GLY ILE ASP LYS ASP LYS PRO SEQRES 5 A 312 LYS GLU ALA VAL THR VAL ALA VAL LYS MET LEU LYS ASP SEQRES 6 A 312 ASP ALA THR GLU LYS ASP LEU SER ASP LEU VAL SER GLU SEQRES 7 A 312 MET GLU MET MET LYS MET ILE GLY LYS HIS LYS ASN ILE SEQRES 8 A 312 ILE ASN LEU LEU GLY ALA CYS THR GLN ASP GLY PRO LEU SEQRES 9 A 312 TYR VAL ILE VAL GLU TYR ALA SER LYS GLY ASN LEU ARG SEQRES 10 A 312 GLU TYR LEU ARG ALA ARG ARG PRO PRO GLY MET GLU TYR SEQRES 11 A 312 SER TYR ASP ILE ASN ARG VAL PRO GLU GLU GLN MET THR SEQRES 12 A 312 PHE LYS ASP LEU VAL SER CYS THR TYR GLN LEU ALA ARG SEQRES 13 A 312 GLY MET GLU TYR LEU ALA SER GLN LYS CYS ILE HIS ARG SEQRES 14 A 312 ASP LEU ALA ALA ARG ASN VAL LEU VAL THR GLU ASN ASN SEQRES 15 A 312 VAL MET LYS ILE ALA ASP PHE GLY LEU ALA ARG ASP ILE SEQRES 16 A 312 ASN ASN ILE ASP PTR TYR LYS LYS THR THR ASN GLY ARG SEQRES 17 A 312 LEU PRO VAL LYS TRP MET ALA PRO GLU ALA LEU PHE ASP SEQRES 18 A 312 ARG VAL TYR THR HIS GLN SER ASP VAL TRP SER PHE GLY SEQRES 19 A 312 VAL LEU MET TRP GLU ILE PHE THR LEU GLY GLY SER PRO SEQRES 20 A 312 TYR PRO GLY ILE PRO VAL GLU GLU LEU PHE LYS LEU LEU SEQRES 21 A 312 LYS GLU GLY HIS ARG MET ASP LYS PRO ALA ASN CYS THR SEQRES 22 A 312 ASN GLU LEU TYR MET MET MET ARG ASP CYS TRP HIS ALA SEQRES 23 A 312 VAL PRO SER GLN ARG PRO THR PHE LYS GLN LEU VAL GLU SEQRES 24 A 312 ASP LEU ASP ARG ILE LEU THR LEU THR THR ASN GLU GLU SEQRES 1 B 312 GLY HIS MET LEU ALA GLY VAL SER GLU TYR GLU LEU PRO SEQRES 2 B 312 GLU ASP PRO LYS TRP GLU PHE PRO ARG ASP LYS LEU THR SEQRES 3 B 312 LEU GLY LYS PRO LEU GLY GLU GLY CYS PHE GLY GLN VAL SEQRES 4 B 312 VAL MET ALA GLU ALA VAL GLY ILE ASP LYS ASP LYS PRO SEQRES 5 B 312 LYS GLU ALA VAL THR VAL ALA VAL LYS MET LEU LYS ASP SEQRES 6 B 312 ASP ALA THR GLU LYS ASP LEU SER ASP LEU VAL SER GLU SEQRES 7 B 312 MET GLU MET MET LYS MET ILE GLY LYS HIS LYS ASN ILE SEQRES 8 B 312 ILE ASN LEU LEU GLY ALA CYS THR GLN ASP GLY PRO LEU SEQRES 9 B 312 TYR VAL ILE VAL GLU TYR ALA SER LYS GLY ASN LEU ARG SEQRES 10 B 312 GLU TYR LEU ARG ALA ARG ARG PRO PRO GLY MET GLU TYR SEQRES 11 B 312 SER TYR ASP ILE ASN ARG VAL PRO GLU GLU GLN MET THR SEQRES 12 B 312 PHE LYS ASP LEU VAL SER CYS THR TYR GLN LEU ALA ARG SEQRES 13 B 312 GLY MET GLU TYR LEU ALA SER GLN LYS CYS ILE HIS ARG SEQRES 14 B 312 ASP LEU ALA ALA ARG ASN VAL LEU VAL THR GLU ASN ASN SEQRES 15 B 312 VAL MET LYS ILE ALA ASP PHE GLY LEU ALA ARG ASP ILE SEQRES 16 B 312 ASN ASN ILE ASP PTR TYR LYS LYS THR THR ASN GLY ARG SEQRES 17 B 312 LEU PRO VAL LYS TRP MET ALA PRO GLU ALA LEU PHE ASP SEQRES 18 B 312 ARG VAL TYR THR HIS GLN SER ASP VAL TRP SER PHE GLY SEQRES 19 B 312 VAL LEU MET TRP GLU ILE PHE THR LEU GLY GLY SER PRO SEQRES 20 B 312 TYR PRO GLY ILE PRO VAL GLU GLU LEU PHE LYS LEU LEU SEQRES 21 B 312 LYS GLU GLY HIS ARG MET ASP LYS PRO ALA ASN CYS THR SEQRES 22 B 312 ASN GLU LEU TYR MET MET MET ARG ASP CYS TRP HIS ALA SEQRES 23 B 312 VAL PRO SER GLN ARG PRO THR PHE LYS GLN LEU VAL GLU SEQRES 24 B 312 ASP LEU ASP ARG ILE LEU THR LEU THR THR ASN GLU GLU SEQRES 1 C 312 GLY HIS MET LEU ALA GLY VAL SER GLU TYR GLU LEU PRO SEQRES 2 C 312 GLU ASP PRO LYS TRP GLU PHE PRO ARG ASP LYS LEU THR SEQRES 3 C 312 LEU GLY LYS PRO LEU GLY GLU GLY CYS PHE GLY GLN VAL SEQRES 4 C 312 VAL MET ALA GLU ALA VAL GLY ILE ASP LYS ASP LYS PRO SEQRES 5 C 312 LYS GLU ALA VAL THR VAL ALA VAL LYS MET LEU LYS ASP SEQRES 6 C 312 ASP ALA THR GLU LYS ASP LEU SER ASP LEU VAL SER GLU SEQRES 7 C 312 MET GLU MET MET LYS MET ILE GLY LYS HIS LYS ASN ILE SEQRES 8 C 312 ILE ASN LEU LEU GLY ALA CYS THR GLN ASP GLY PRO LEU SEQRES 9 C 312 TYR VAL ILE VAL GLU TYR ALA SER LYS GLY ASN LEU ARG SEQRES 10 C 312 GLU TYR LEU ARG ALA ARG ARG PRO PRO GLY MET GLU TYR SEQRES 11 C 312 SER TYR ASP ILE ASN ARG VAL PRO GLU GLU GLN MET THR SEQRES 12 C 312 PHE LYS ASP LEU VAL SER CYS THR TYR GLN LEU ALA ARG SEQRES 13 C 312 GLY MET GLU TYR LEU ALA SER GLN LYS CYS ILE HIS ARG SEQRES 14 C 312 ASP LEU ALA ALA ARG ASN VAL LEU VAL THR GLU ASN ASN SEQRES 15 C 312 VAL MET LYS ILE ALA ASP PHE GLY LEU ALA ARG ASP ILE SEQRES 16 C 312 ASN ASN ILE ASP PTR TYR LYS LYS THR THR ASN GLY ARG SEQRES 17 C 312 LEU PRO VAL LYS TRP MET ALA PRO GLU ALA LEU PHE ASP SEQRES 18 C 312 ARG VAL TYR THR HIS GLN SER ASP VAL TRP SER PHE GLY SEQRES 19 C 312 VAL LEU MET TRP GLU ILE PHE THR LEU GLY GLY SER PRO SEQRES 20 C 312 TYR PRO GLY ILE PRO VAL GLU GLU LEU PHE LYS LEU LEU SEQRES 21 C 312 LYS GLU GLY HIS ARG MET ASP LYS PRO ALA ASN CYS THR SEQRES 22 C 312 ASN GLU LEU TYR MET MET MET ARG ASP CYS TRP HIS ALA SEQRES 23 C 312 VAL PRO SER GLN ARG PRO THR PHE LYS GLN LEU VAL GLU SEQRES 24 C 312 ASP LEU ASP ARG ILE LEU THR LEU THR THR ASN GLU GLU SEQRES 1 D 312 GLY HIS MET LEU ALA GLY VAL SER GLU TYR GLU LEU PRO SEQRES 2 D 312 GLU ASP PRO LYS TRP GLU PHE PRO ARG ASP LYS LEU THR SEQRES 3 D 312 LEU GLY LYS PRO LEU GLY GLU GLY CYS PHE GLY GLN VAL SEQRES 4 D 312 VAL MET ALA GLU ALA VAL GLY ILE ASP LYS ASP LYS PRO SEQRES 5 D 312 LYS GLU ALA VAL THR VAL ALA VAL LYS MET LEU LYS ASP SEQRES 6 D 312 ASP ALA THR GLU LYS ASP LEU SER ASP LEU VAL SER GLU SEQRES 7 D 312 MET GLU MET MET LYS MET ILE GLY LYS HIS LYS ASN ILE SEQRES 8 D 312 ILE ASN LEU LEU GLY ALA CYS THR GLN ASP GLY PRO LEU SEQRES 9 D 312 TYR VAL ILE VAL GLU TYR ALA SER LYS GLY ASN LEU ARG SEQRES 10 D 312 GLU TYR LEU ARG ALA ARG ARG PRO PRO GLY MET GLU TYR SEQRES 11 D 312 SER TYR ASP ILE ASN ARG VAL PRO GLU GLU GLN MET THR SEQRES 12 D 312 PHE LYS ASP LEU VAL SER CYS THR TYR GLN LEU ALA ARG SEQRES 13 D 312 GLY MET GLU TYR LEU ALA SER GLN LYS CYS ILE HIS ARG SEQRES 14 D 312 ASP LEU ALA ALA ARG ASN VAL LEU VAL THR GLU ASN ASN SEQRES 15 D 312 VAL MET LYS ILE ALA ASP PHE GLY LEU ALA ARG ASP ILE SEQRES 16 D 312 ASN ASN ILE ASP PTR TYR LYS LYS THR THR ASN GLY ARG SEQRES 17 D 312 LEU PRO VAL LYS TRP MET ALA PRO GLU ALA LEU PHE ASP SEQRES 18 D 312 ARG VAL TYR THR HIS GLN SER ASP VAL TRP SER PHE GLY SEQRES 19 D 312 VAL LEU MET TRP GLU ILE PHE THR LEU GLY GLY SER PRO SEQRES 20 D 312 TYR PRO GLY ILE PRO VAL GLU GLU LEU PHE LYS LEU LEU SEQRES 21 D 312 LYS GLU GLY HIS ARG MET ASP LYS PRO ALA ASN CYS THR SEQRES 22 D 312 ASN GLU LEU TYR MET MET MET ARG ASP CYS TRP HIS ALA SEQRES 23 D 312 VAL PRO SER GLN ARG PRO THR PHE LYS GLN LEU VAL GLU SEQRES 24 D 312 ASP LEU ASP ARG ILE LEU THR LEU THR THR ASN GLU GLU MODRES 8H75 PTR A 656 TYR MODIFIED RESIDUE MODRES 8H75 PTR B 656 TYR MODIFIED RESIDUE HET PTR A 656 16 HET PTR B 656 16 HET KX0 A1001 28 HET CL A1002 1 HET KX0 B1001 28 HET KX0 C1001 28 HET KX0 D1001 28 HETNAM PTR O-PHOSPHOTYROSINE HETNAM KX0 TINENGOTINIB HETNAM CL CHLORIDE ION HETSYN PTR PHOSPHONOTYROSINE HETSYN KX0 4-[9-(2-CHLOROPHENYL)-6-METHYL-2,4,5,8,12- HETSYN 2 KX0 PENTAZATRICYCLO[8.4.0.0^{3,7}]TETRADECA-1(10),3,6,8, HETSYN 3 KX0 11,13-HEXAEN-13-YL]MORPHOLINE FORMUL 1 PTR 2(C9 H12 N O6 P) FORMUL 5 KX0 4(C20 H19 CL N6 O) FORMUL 6 CL CL 1- FORMUL 10 HOH *26(H2 O) HELIX 1 AA1 THR A 524 GLY A 542 1 19 HELIX 2 AA2 LEU A 572 ARG A 579 1 8 HELIX 3 AA3 THR A 599 GLN A 620 1 22 HELIX 4 AA4 ALA A 628 ASN A 631 5 4 HELIX 5 AA5 ALA A 671 ARG A 678 1 8 HELIX 6 AA6 THR A 681 THR A 698 1 18 HELIX 7 AA7 GLU A 711 GLY A 719 1 9 HELIX 8 AA8 THR A 729 TRP A 740 1 12 HELIX 9 AA9 THR A 749 LEU A 763 1 15 HELIX 10 AB1 THR B 524 GLY B 542 1 19 HELIX 11 AB2 LEU B 572 ALA B 578 1 7 HELIX 12 AB3 THR B 599 SER B 619 1 21 HELIX 13 AB4 ALA B 628 ARG B 630 5 3 HELIX 14 AB5 ALA B 671 PHE B 676 1 6 HELIX 15 AB6 THR B 681 THR B 698 1 18 HELIX 16 AB7 PRO B 708 GLY B 719 1 12 HELIX 17 AB8 THR B 729 TRP B 740 1 12 HELIX 18 AB9 VAL B 743 ARG B 747 5 5 HELIX 19 AC1 THR B 749 THR B 764 1 16 HELIX 20 AC2 THR C 524 GLY C 542 1 19 HELIX 21 AC3 ASN C 571 ALA C 578 1 8 HELIX 22 AC4 THR C 599 ALA C 618 1 20 HELIX 23 AC5 ALA C 671 ARG C 678 1 8 HELIX 24 AC6 THR C 681 GLN C 683 5 3 HELIX 25 AC7 SER C 684 THR C 698 1 15 HELIX 26 AC8 PRO C 708 GLU C 718 1 11 HELIX 27 AC9 THR C 729 TRP C 740 1 12 HELIX 28 AD1 THR C 749 LEU C 763 1 15 HELIX 29 AD2 THR D 524 ILE D 541 1 18 HELIX 30 AD3 ASN D 571 ALA D 578 1 8 HELIX 31 AD4 THR D 599 GLN D 620 1 22 HELIX 32 AD5 ALA D 628 VAL D 632 5 5 HELIX 33 AD6 ASP D 644 ALA D 648 5 5 HELIX 34 AD7 ALA D 671 ARG D 678 1 8 HELIX 35 AD8 THR D 681 THR D 698 1 18 HELIX 36 AD9 PRO D 708 GLY D 719 1 12 HELIX 37 AE1 THR D 729 TRP D 740 1 12 HELIX 38 AE2 VAL D 743 ARG D 747 5 5 HELIX 39 AE3 THR D 749 THR D 764 1 16 SHEET 1 AA1 5 LEU A 481 GLY A 490 0 SHEET 2 AA1 5 GLY A 493 VAL A 501 -1 O VAL A 495 N LEU A 487 SHEET 3 AA1 5 ALA A 511 MET A 518 -1 O VAL A 514 N ALA A 498 SHEET 4 AA1 5 VAL A 562 GLU A 565 -1 O VAL A 562 N LYS A 517 SHEET 5 AA1 5 LEU A 550 ALA A 553 -1 N LEU A 551 O ILE A 563 SHEET 1 AA2 3 GLY A 570 ASN A 571 0 SHEET 2 AA2 3 LEU A 633 VAL A 634 -1 O VAL A 634 N GLY A 570 SHEET 3 AA2 3 MET A 640 LYS A 641 -1 O LYS A 641 N LEU A 633 SHEET 1 AA3 2 CYS A 622 ILE A 623 0 SHEET 2 AA3 2 ARG A 649 ASP A 650 -1 O ARG A 649 N ILE A 623 SHEET 1 AA4 5 LEU B 481 THR B 482 0 SHEET 2 AA4 5 GLN B 494 ALA B 500 -1 O GLU B 499 N THR B 482 SHEET 3 AA4 5 VAL B 512 MET B 518 -1 O VAL B 512 N ALA B 500 SHEET 4 AA4 5 TYR B 561 VAL B 564 -1 O VAL B 562 N LYS B 517 SHEET 5 AA4 5 GLY B 552 ALA B 553 -1 N GLY B 552 O ILE B 563 SHEET 1 AA5 3 GLY B 570 ASN B 571 0 SHEET 2 AA5 3 VAL B 632 VAL B 634 -1 O VAL B 634 N GLY B 570 SHEET 3 AA5 3 MET B 640 ILE B 642 -1 O LYS B 641 N LEU B 633 SHEET 1 AA6 5 LYS C 485 PRO C 486 0 SHEET 2 AA6 5 GLN C 494 VAL C 501 -1 O MET C 497 N LYS C 485 SHEET 3 AA6 5 ALA C 511 MET C 518 -1 O MET C 518 N GLN C 494 SHEET 4 AA6 5 TYR C 561 VAL C 564 -1 O VAL C 562 N LYS C 517 SHEET 5 AA6 5 LEU C 550 ALA C 553 -1 N LEU C 551 O ILE C 563 SHEET 1 AA7 2 VAL C 632 THR C 635 0 SHEET 2 AA7 2 VAL C 639 ILE C 642 -1 O LYS C 641 N LEU C 633 SHEET 1 AA8 3 THR D 482 LEU D 483 0 SHEET 2 AA8 3 GLN D 494 VAL D 501 -1 O GLU D 499 N THR D 482 SHEET 3 AA8 3 GLY D 488 GLU D 489 -1 N GLY D 488 O VAL D 495 SHEET 1 AA9 5 THR D 482 LEU D 483 0 SHEET 2 AA9 5 GLN D 494 VAL D 501 -1 O GLU D 499 N THR D 482 SHEET 3 AA9 5 ALA D 511 MET D 518 -1 O MET D 518 N GLN D 494 SHEET 4 AA9 5 TYR D 561 ILE D 563 -1 O VAL D 562 N LYS D 517 SHEET 5 AA9 5 GLY D 552 CYS D 554 -1 N CYS D 554 O TYR D 561 SHEET 1 AB1 2 CYS D 622 ILE D 623 0 SHEET 2 AB1 2 ARG D 649 ASP D 650 -1 O ARG D 649 N ILE D 623 SHEET 1 AB2 2 LEU D 633 VAL D 634 0 SHEET 2 AB2 2 MET D 640 LYS D 641 -1 O LYS D 641 N LEU D 633 LINK C ASP A 655 N PTR A 656 1555 1555 1.33 LINK C PTR A 656 N TYR A 657 1555 1555 1.33 LINK C ASP B 655 N PTR B 656 1555 1555 1.33 LINK C PTR B 656 N TYR B 657 1555 1555 1.32 CRYST1 43.022 198.595 67.203 90.00 92.94 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023244 0.000000 0.001194 0.00000 SCALE2 0.000000 0.005035 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014900 0.00000