data_8H79 # _entry.id 8H79 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8H79 pdb_00008h79 10.2210/pdb8h79/pdb WWPDB D_1300032968 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8H79 _pdbx_database_status.recvd_initial_deposition_date 2022-10-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Hosaka, T.' 1 0000-0002-7652-8114 'Kimura-Someya, T.' 2 0000-0003-2232-1801 'Shirouzu, M.' 3 0000-0002-7997-2149 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Cyanorhodopsin-II: diverse proton-pumping rhodopsins in the cyanobacterial lineage illuminated by large-scale metagenomic' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hasegawa, M.' 1 ? primary 'Hosaka, T.' 2 ? primary 'Kojima, K.' 3 ? primary 'Nishimura, Y.' 4 ? primary 'Kurihara, M.' 5 ? primary 'Nakajima, Y.' 6 ? primary 'Ishizuka-Katsura, Y.' 7 ? primary 'Kimura-Someya, T.' 8 ? primary 'Shirouzu, M.' 9 ? primary 'Sudo, Y.' 10 ? primary 'Yoshizawa, S.' 11 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 8H79 _cell.details ? _cell.formula_units_Z ? _cell.length_a 63.150 _cell.length_a_esd ? _cell.length_b 63.150 _cell.length_b_esd ? _cell.length_c 117.760 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8H79 _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 3 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'cyanorhodopsin-II (CyR-II) P7104R' 28417.238 1 ? ? ? 'Sequence has been deposited to Genbank with accession number WP_017301364.1' 2 non-polymer syn RETINAL 284.436 1 ? ? ? ? 3 non-polymer syn 'TETRAETHYLENE GLYCOL' 194.226 1 ? ? ? ? 4 non-polymer syn HEXANE 86.175 3 ? ? ? ? 5 non-polymer syn N-OCTANE 114.229 3 ? ? ? ? 6 non-polymer syn TETRADECANE 198.388 2 ? ? ? ? 7 non-polymer syn HEXADECANE 226.441 1 ? ? ? ? 8 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 9 non-polymer nat 'CHLORIDE ION' 35.453 1 ? ? ? ? 10 water nat water 18.015 46 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGMNLLSQVSFWVGCGILAFGSIVFGLGAWNAKRQSWEEFYIVHFTVTTVAACAYLAMAMGQGEITLQNTDLAAE GVRHIYWARYCDWIVTTPLILFSICRLSKVRGTMIAGIIMSDVLMIITGAIAAFSFAPERYVWYIVSCMFEVAIFVILLG AVRTSAMRQHYDVKNLFNLVFTVFSIYFWAYPIVWILGQKGVGLYGTGVESLLIMLLDITAKVFYGFLLLRDRETLQRMG QLSSVPNSGSGVGNYR ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGMNLLSQVSFWVGCGILAFGSIVFGLGAWNAKRQSWEEFYIVHFTVTTVAACAYLAMAMGQGEITLQNTDLAAE GVRHIYWARYCDWIVTTPLILFSICRLSKVRGTMIAGIIMSDVLMIITGAIAAFSFAPERYVWYIVSCMFEVAIFVILLG AVRTSAMRQHYDVKNLFNLVFTVFSIYFWAYPIVWILGQKGVGLYGTGVESLLIMLLDITAKVFYGFLLLRDRETLQRMG QLSSVPNSGSGVGNYR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 MET n 1 9 ASN n 1 10 LEU n 1 11 LEU n 1 12 SER n 1 13 GLN n 1 14 VAL n 1 15 SER n 1 16 PHE n 1 17 TRP n 1 18 VAL n 1 19 GLY n 1 20 CYS n 1 21 GLY n 1 22 ILE n 1 23 LEU n 1 24 ALA n 1 25 PHE n 1 26 GLY n 1 27 SER n 1 28 ILE n 1 29 VAL n 1 30 PHE n 1 31 GLY n 1 32 LEU n 1 33 GLY n 1 34 ALA n 1 35 TRP n 1 36 ASN n 1 37 ALA n 1 38 LYS n 1 39 ARG n 1 40 GLN n 1 41 SER n 1 42 TRP n 1 43 GLU n 1 44 GLU n 1 45 PHE n 1 46 TYR n 1 47 ILE n 1 48 VAL n 1 49 HIS n 1 50 PHE n 1 51 THR n 1 52 VAL n 1 53 THR n 1 54 THR n 1 55 VAL n 1 56 ALA n 1 57 ALA n 1 58 CYS n 1 59 ALA n 1 60 TYR n 1 61 LEU n 1 62 ALA n 1 63 MET n 1 64 ALA n 1 65 MET n 1 66 GLY n 1 67 GLN n 1 68 GLY n 1 69 GLU n 1 70 ILE n 1 71 THR n 1 72 LEU n 1 73 GLN n 1 74 ASN n 1 75 THR n 1 76 ASP n 1 77 LEU n 1 78 ALA n 1 79 ALA n 1 80 GLU n 1 81 GLY n 1 82 VAL n 1 83 ARG n 1 84 HIS n 1 85 ILE n 1 86 TYR n 1 87 TRP n 1 88 ALA n 1 89 ARG n 1 90 TYR n 1 91 CYS n 1 92 ASP n 1 93 TRP n 1 94 ILE n 1 95 VAL n 1 96 THR n 1 97 THR n 1 98 PRO n 1 99 LEU n 1 100 ILE n 1 101 LEU n 1 102 PHE n 1 103 SER n 1 104 ILE n 1 105 CYS n 1 106 ARG n 1 107 LEU n 1 108 SER n 1 109 LYS n 1 110 VAL n 1 111 ARG n 1 112 GLY n 1 113 THR n 1 114 MET n 1 115 ILE n 1 116 ALA n 1 117 GLY n 1 118 ILE n 1 119 ILE n 1 120 MET n 1 121 SER n 1 122 ASP n 1 123 VAL n 1 124 LEU n 1 125 MET n 1 126 ILE n 1 127 ILE n 1 128 THR n 1 129 GLY n 1 130 ALA n 1 131 ILE n 1 132 ALA n 1 133 ALA n 1 134 PHE n 1 135 SER n 1 136 PHE n 1 137 ALA n 1 138 PRO n 1 139 GLU n 1 140 ARG n 1 141 TYR n 1 142 VAL n 1 143 TRP n 1 144 TYR n 1 145 ILE n 1 146 VAL n 1 147 SER n 1 148 CYS n 1 149 MET n 1 150 PHE n 1 151 GLU n 1 152 VAL n 1 153 ALA n 1 154 ILE n 1 155 PHE n 1 156 VAL n 1 157 ILE n 1 158 LEU n 1 159 LEU n 1 160 GLY n 1 161 ALA n 1 162 VAL n 1 163 ARG n 1 164 THR n 1 165 SER n 1 166 ALA n 1 167 MET n 1 168 ARG n 1 169 GLN n 1 170 HIS n 1 171 TYR n 1 172 ASP n 1 173 VAL n 1 174 LYS n 1 175 ASN n 1 176 LEU n 1 177 PHE n 1 178 ASN n 1 179 LEU n 1 180 VAL n 1 181 PHE n 1 182 THR n 1 183 VAL n 1 184 PHE n 1 185 SER n 1 186 ILE n 1 187 TYR n 1 188 PHE n 1 189 TRP n 1 190 ALA n 1 191 TYR n 1 192 PRO n 1 193 ILE n 1 194 VAL n 1 195 TRP n 1 196 ILE n 1 197 LEU n 1 198 GLY n 1 199 GLN n 1 200 LYS n 1 201 GLY n 1 202 VAL n 1 203 GLY n 1 204 LEU n 1 205 TYR n 1 206 GLY n 1 207 THR n 1 208 GLY n 1 209 VAL n 1 210 GLU n 1 211 SER n 1 212 LEU n 1 213 LEU n 1 214 ILE n 1 215 MET n 1 216 LEU n 1 217 LEU n 1 218 ASP n 1 219 ILE n 1 220 THR n 1 221 ALA n 1 222 LYS n 1 223 VAL n 1 224 PHE n 1 225 TYR n 1 226 GLY n 1 227 PHE n 1 228 LEU n 1 229 LEU n 1 230 LEU n 1 231 ARG n 1 232 ASP n 1 233 ARG n 1 234 GLU n 1 235 THR n 1 236 LEU n 1 237 GLN n 1 238 ARG n 1 239 MET n 1 240 GLY n 1 241 GLN n 1 242 LEU n 1 243 SER n 1 244 SER n 1 245 VAL n 1 246 PRO n 1 247 ASN n 1 248 SER n 1 249 GLY n 1 250 SER n 1 251 GLY n 1 252 VAL n 1 253 GLY n 1 254 ASN n 1 255 TYR n 1 256 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 256 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Nodosilinea nodulosa PCC 7104' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 118166 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8H79 _struct_ref.pdbx_db_accession 8H79 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8H79 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 256 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 8H79 _struct_ref_seq.db_align_beg -6 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 249 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -6 _struct_ref_seq.pdbx_auth_seq_align_end 249 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C14 non-polymer . TETRADECANE ? 'C14 H30' 198.388 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HEX non-polymer . HEXANE ? 'C6 H14' 86.175 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 OCT non-polymer . N-OCTANE ? 'C8 H18' 114.229 PG4 non-polymer . 'TETRAETHYLENE GLYCOL' ? 'C8 H18 O5' 194.226 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 R16 non-polymer . HEXADECANE ? 'C16 H34' 226.441 RET non-polymer . RETINAL ? 'C20 H28 O' 284.436 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8H79 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.39 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 48.43 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'LIPIDIC CUBIC PHASE' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.8 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100mM HEPES, 46% PEG 400, 400mM lithium sulfate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 93 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-07-02 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SPRING-8 BEAMLINE BL32XU' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL32XU _diffrn_source.pdbx_synchrotron_site SPring-8 # _reflns.B_iso_Wilson_estimate 27.860 _reflns.entry_id 8H79 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.070 _reflns.d_resolution_low 49.600 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 17190 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.800 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 12.407 _reflns.pdbx_Rmerge_I_obs 0.227 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 10.250 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.970 _reflns.pdbx_scaling_rejects 495 _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.236 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 213269 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.997 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? _reflns.pdbx_CC_split_method ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 2.070 2.200 ? 1.800 ? 35002 2825 ? 2824 100.000 ? ? ? ? 1.645 ? ? ? ? ? ? ? ? 12.394 ? ? ? ? 1.716 ? ? 1 1 0.623 ? ? ? ? ? ? ? ? ? ? 2.200 2.350 ? 2.690 ? 31747 2520 ? 2520 100.000 ? ? ? ? 1.144 ? ? ? ? ? ? ? ? 12.598 ? ? ? ? 1.192 ? ? 2 1 0.781 ? ? ? ? ? ? ? ? ? ? 2.350 2.540 ? 4.050 ? 30427 2404 ? 2403 100.000 ? ? ? ? 0.765 ? ? ? ? ? ? ? ? 12.662 ? ? ? ? 0.797 ? ? 3 1 0.907 ? ? ? ? ? ? ? ? ? ? 2.540 2.780 ? 6.210 ? 27444 2191 ? 2191 100.000 ? ? ? ? 0.470 ? ? ? ? ? ? ? ? 12.526 ? ? ? ? 0.490 ? ? 4 1 0.965 ? ? ? ? ? ? ? ? ? ? 2.780 3.100 ? 9.390 ? 23871 1969 ? 1969 100.000 ? ? ? ? 0.293 ? ? ? ? ? ? ? ? 12.123 ? ? ? ? 0.306 ? ? 5 1 0.984 ? ? ? ? ? ? ? ? ? ? 3.100 3.590 ? 13.340 ? 20728 1831 ? 1831 100.000 ? ? ? ? 0.196 ? ? ? ? ? ? ? ? 11.321 ? ? ? ? 0.205 ? ? 6 1 0.991 ? ? ? ? ? ? ? ? ? ? 3.590 4.390 ? 25.010 ? 19321 1519 ? 1518 99.900 ? ? ? ? 0.087 ? ? ? ? ? ? ? ? 12.728 ? ? ? ? 0.091 ? ? 7 1 0.998 ? ? ? ? ? ? ? ? ? ? 4.390 6.210 ? 30.500 ? 16066 1232 ? 1214 98.500 ? ? ? ? 0.075 ? ? ? ? ? ? ? ? 13.234 ? ? ? ? 0.078 ? ? 8 1 0.998 ? ? ? ? ? ? ? ? ? ? 6.210 49.600 ? 31.970 ? 8663 726 ? 720 99.200 ? ? ? ? 0.050 ? ? ? ? ? ? ? ? 12.032 ? ? ? ? 0.053 ? ? 9 1 0.997 ? ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 78.470 _refine.B_iso_mean 29.5547 _refine.B_iso_min 13.850 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8H79 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.0700 _refine.ls_d_res_low 49.6000 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 17186 _refine.ls_number_reflns_R_free 1718 _refine.ls_number_reflns_R_work 15468 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.8400 _refine.ls_percent_reflns_R_free 10.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2072 _refine.ls_R_factor_R_free 0.2477 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2029 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.360 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1C3W _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 24.6600 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2000 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.0700 _refine_hist.d_res_low 49.6000 _refine_hist.number_atoms_solvent 46 _refine_hist.number_atoms_total 2045 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 236 _refine_hist.pdbx_B_iso_mean_ligand 36.50 _refine_hist.pdbx_B_iso_mean_solvent 35.23 _refine_hist.pdbx_number_atoms_protein 1874 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 125 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.0700 2.1300 1397 . 138 1259 100.0000 . . . 0.2797 0.0000 0.2378 . . . . . . . 12 . . . 'X-RAY DIFFRACTION' 2.1300 2.2000 1425 . 142 1283 100.0000 . . . 0.2740 0.0000 0.2068 . . . . . . . 12 . . . 'X-RAY DIFFRACTION' 2.2000 2.2800 1397 . 138 1259 100.0000 . . . 0.2593 0.0000 0.1982 . . . . . . . 12 . . . 'X-RAY DIFFRACTION' 2.2800 2.3700 1399 . 144 1255 100.0000 . . . 0.2666 0.0000 0.1946 . . . . . . . 12 . . . 'X-RAY DIFFRACTION' 2.3700 2.4800 1409 . 140 1269 100.0000 . . . 0.2524 0.0000 0.1737 . . . . . . . 12 . . . 'X-RAY DIFFRACTION' 2.4800 2.6100 1426 . 142 1284 100.0000 . . . 0.2308 0.0000 0.1686 . . . . . . . 12 . . . 'X-RAY DIFFRACTION' 2.6100 2.7700 1418 . 144 1274 100.0000 . . . 0.2331 0.0000 0.1786 . . . . . . . 12 . . . 'X-RAY DIFFRACTION' 2.7700 2.9900 1423 . 147 1276 100.0000 . . . 0.2212 0.0000 0.1627 . . . . . . . 12 . . . 'X-RAY DIFFRACTION' 2.9900 3.2900 1442 . 145 1297 100.0000 . . . 0.2372 0.0000 0.2094 . . . . . . . 12 . . . 'X-RAY DIFFRACTION' 3.2900 3.7600 1435 . 140 1295 100.0000 . . . 0.2134 0.0000 0.1904 . . . . . . . 12 . . . 'X-RAY DIFFRACTION' 3.7600 4.7400 1456 . 146 1310 99.0000 . . . 0.2472 0.0000 0.2085 . . . . . . . 12 . . . 'X-RAY DIFFRACTION' 4.7400 49.6000 1559 . 152 1407 100.0000 . . . 0.2791 0.0000 0.2432 . . . . . . . 12 . . . # _struct.entry_id 8H79 _struct.title 'The crystal structure of cyanorhodopsin-II (CyR-II) P7104R from Nodosilinea nodulosa PCC 7104' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8H79 _struct_keywords.text 'RETINAL CELL-FREE SYNTHESIS Bacterial type rhodopsin Cyanobacteria, MEMBRANE PROTEIN' _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 5 ? I N N 5 ? J N N 6 ? K N N 6 ? L N N 7 ? M N N 8 ? N N N 9 ? O N N 10 ? # _struct_biol.details 'There is no clear evidence that the assembly should be a monomer or trimer.' _struct_biol.id 1 _struct_biol.pdbx_aggregation_state ? _struct_biol.pdbx_assembly_method ? _struct_biol.pdbx_formula_weight ? _struct_biol.pdbx_formula_weight_method ? _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 9 ? ALA A 37 ? ASN A 2 ALA A 30 1 ? 29 HELX_P HELX_P2 AA2 ARG A 39 ? MET A 65 ? ARG A 32 MET A 58 1 ? 27 HELX_P HELX_P3 AA3 TRP A 87 ? LYS A 109 ? TRP A 80 LYS A 102 1 ? 23 HELX_P HELX_P4 AA4 ARG A 111 ? SER A 135 ? ARG A 104 SER A 128 1 ? 25 HELX_P HELX_P5 AA5 PRO A 138 ? LEU A 159 ? PRO A 131 LEU A 152 1 ? 22 HELX_P HELX_P6 AA6 GLY A 160 ? GLN A 169 ? GLY A 153 GLN A 162 1 ? 10 HELX_P HELX_P7 AA7 VAL A 173 ? GLY A 198 ? VAL A 166 GLY A 191 1 ? 26 HELX_P HELX_P8 AA8 GLY A 206 ? VAL A 223 ? GLY A 199 VAL A 216 1 ? 18 HELX_P HELX_P9 AA9 VAL A 223 ? GLY A 240 ? VAL A 216 GLY A 233 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag one _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 222 _struct_conn.ptnr1_label_atom_id NZ _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id RET _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id C15 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 215 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id RET _struct_conn.ptnr2_auth_seq_id 301 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.431 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ALA _struct_mon_prot_cis.label_seq_id 137 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ALA _struct_mon_prot_cis.auth_seq_id 130 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 138 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 131 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.41 # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 70 ? GLN A 73 ? ILE A 63 GLN A 66 AA1 2 VAL A 82 ? ILE A 85 ? VAL A 75 ILE A 78 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id ILE _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 70 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id ILE _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 63 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id ILE _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 85 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id ILE _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 78 # _atom_sites.entry_id 8H79 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.015835 _atom_sites.fract_transf_matrix[1][2] 0.009143 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018285 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008492 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -6 ? ? ? A . n A 1 2 SER 2 -5 ? ? ? A . n A 1 3 SER 3 -4 ? ? ? A . n A 1 4 GLY 4 -3 ? ? ? A . n A 1 5 SER 5 -2 ? ? ? A . n A 1 6 SER 6 -1 ? ? ? A . n A 1 7 GLY 7 0 ? ? ? A . n A 1 8 MET 8 1 1 MET MET A . n A 1 9 ASN 9 2 2 ASN ASN A . n A 1 10 LEU 10 3 3 LEU LEU A . n A 1 11 LEU 11 4 4 LEU LEU A . n A 1 12 SER 12 5 5 SER SER A . n A 1 13 GLN 13 6 6 GLN GLN A . n A 1 14 VAL 14 7 7 VAL VAL A . n A 1 15 SER 15 8 8 SER SER A . n A 1 16 PHE 16 9 9 PHE PHE A . n A 1 17 TRP 17 10 10 TRP TRP A . n A 1 18 VAL 18 11 11 VAL VAL A . n A 1 19 GLY 19 12 12 GLY GLY A . n A 1 20 CYS 20 13 13 CYS CYS A . n A 1 21 GLY 21 14 14 GLY GLY A . n A 1 22 ILE 22 15 15 ILE ILE A . n A 1 23 LEU 23 16 16 LEU LEU A . n A 1 24 ALA 24 17 17 ALA ALA A . n A 1 25 PHE 25 18 18 PHE PHE A . n A 1 26 GLY 26 19 19 GLY GLY A . n A 1 27 SER 27 20 20 SER SER A . n A 1 28 ILE 28 21 21 ILE ILE A . n A 1 29 VAL 29 22 22 VAL VAL A . n A 1 30 PHE 30 23 23 PHE PHE A . n A 1 31 GLY 31 24 24 GLY GLY A . n A 1 32 LEU 32 25 25 LEU LEU A . n A 1 33 GLY 33 26 26 GLY GLY A . n A 1 34 ALA 34 27 27 ALA ALA A . n A 1 35 TRP 35 28 28 TRP TRP A . n A 1 36 ASN 36 29 29 ASN ASN A . n A 1 37 ALA 37 30 30 ALA ALA A . n A 1 38 LYS 38 31 31 LYS LYS A . n A 1 39 ARG 39 32 32 ARG ARG A . n A 1 40 GLN 40 33 33 GLN GLN A . n A 1 41 SER 41 34 34 SER SER A . n A 1 42 TRP 42 35 35 TRP TRP A . n A 1 43 GLU 43 36 36 GLU GLU A . n A 1 44 GLU 44 37 37 GLU GLU A . n A 1 45 PHE 45 38 38 PHE PHE A . n A 1 46 TYR 46 39 39 TYR TYR A . n A 1 47 ILE 47 40 40 ILE ILE A . n A 1 48 VAL 48 41 41 VAL VAL A . n A 1 49 HIS 49 42 42 HIS HIS A . n A 1 50 PHE 50 43 43 PHE PHE A . n A 1 51 THR 51 44 44 THR THR A . n A 1 52 VAL 52 45 45 VAL VAL A . n A 1 53 THR 53 46 46 THR THR A . n A 1 54 THR 54 47 47 THR THR A . n A 1 55 VAL 55 48 48 VAL VAL A . n A 1 56 ALA 56 49 49 ALA ALA A . n A 1 57 ALA 57 50 50 ALA ALA A . n A 1 58 CYS 58 51 51 CYS CYS A . n A 1 59 ALA 59 52 52 ALA ALA A . n A 1 60 TYR 60 53 53 TYR TYR A . n A 1 61 LEU 61 54 54 LEU LEU A . n A 1 62 ALA 62 55 55 ALA ALA A . n A 1 63 MET 63 56 56 MET MET A . n A 1 64 ALA 64 57 57 ALA ALA A . n A 1 65 MET 65 58 58 MET MET A . n A 1 66 GLY 66 59 59 GLY GLY A . n A 1 67 GLN 67 60 60 GLN GLN A . n A 1 68 GLY 68 61 61 GLY GLY A . n A 1 69 GLU 69 62 62 GLU GLU A . n A 1 70 ILE 70 63 63 ILE ILE A . n A 1 71 THR 71 64 64 THR THR A . n A 1 72 LEU 72 65 65 LEU LEU A . n A 1 73 GLN 73 66 66 GLN GLN A . n A 1 74 ASN 74 67 67 ASN ASN A . n A 1 75 THR 75 68 68 THR THR A . n A 1 76 ASP 76 69 69 ASP ASP A . n A 1 77 LEU 77 70 70 LEU LEU A . n A 1 78 ALA 78 71 71 ALA ALA A . n A 1 79 ALA 79 72 72 ALA ALA A . n A 1 80 GLU 80 73 73 GLU GLU A . n A 1 81 GLY 81 74 74 GLY GLY A . n A 1 82 VAL 82 75 75 VAL VAL A . n A 1 83 ARG 83 76 76 ARG ARG A . n A 1 84 HIS 84 77 77 HIS HIS A . n A 1 85 ILE 85 78 78 ILE ILE A . n A 1 86 TYR 86 79 79 TYR TYR A . n A 1 87 TRP 87 80 80 TRP TRP A . n A 1 88 ALA 88 81 81 ALA ALA A . n A 1 89 ARG 89 82 82 ARG ARG A . n A 1 90 TYR 90 83 83 TYR TYR A . n A 1 91 CYS 91 84 84 CYS CYS A . n A 1 92 ASP 92 85 85 ASP ASP A . n A 1 93 TRP 93 86 86 TRP TRP A . n A 1 94 ILE 94 87 87 ILE ILE A . n A 1 95 VAL 95 88 88 VAL VAL A . n A 1 96 THR 96 89 89 THR THR A . n A 1 97 THR 97 90 90 THR THR A . n A 1 98 PRO 98 91 91 PRO PRO A . n A 1 99 LEU 99 92 92 LEU LEU A . n A 1 100 ILE 100 93 93 ILE ILE A . n A 1 101 LEU 101 94 94 LEU LEU A . n A 1 102 PHE 102 95 95 PHE PHE A . n A 1 103 SER 103 96 96 SER SER A . n A 1 104 ILE 104 97 97 ILE ILE A . n A 1 105 CYS 105 98 98 CYS CYS A . n A 1 106 ARG 106 99 99 ARG ARG A . n A 1 107 LEU 107 100 100 LEU LEU A . n A 1 108 SER 108 101 101 SER SER A . n A 1 109 LYS 109 102 102 LYS LYS A . n A 1 110 VAL 110 103 103 VAL VAL A . n A 1 111 ARG 111 104 104 ARG ARG A . n A 1 112 GLY 112 105 105 GLY GLY A . n A 1 113 THR 113 106 106 THR THR A . n A 1 114 MET 114 107 107 MET MET A . n A 1 115 ILE 115 108 108 ILE ILE A . n A 1 116 ALA 116 109 109 ALA ALA A . n A 1 117 GLY 117 110 110 GLY GLY A . n A 1 118 ILE 118 111 111 ILE ILE A . n A 1 119 ILE 119 112 112 ILE ILE A . n A 1 120 MET 120 113 113 MET MET A . n A 1 121 SER 121 114 114 SER SER A . n A 1 122 ASP 122 115 115 ASP ASP A . n A 1 123 VAL 123 116 116 VAL VAL A . n A 1 124 LEU 124 117 117 LEU LEU A . n A 1 125 MET 125 118 118 MET MET A . n A 1 126 ILE 126 119 119 ILE ILE A . n A 1 127 ILE 127 120 120 ILE ILE A . n A 1 128 THR 128 121 121 THR THR A . n A 1 129 GLY 129 122 122 GLY GLY A . n A 1 130 ALA 130 123 123 ALA ALA A . n A 1 131 ILE 131 124 124 ILE ILE A . n A 1 132 ALA 132 125 125 ALA ALA A . n A 1 133 ALA 133 126 126 ALA ALA A . n A 1 134 PHE 134 127 127 PHE PHE A . n A 1 135 SER 135 128 128 SER SER A . n A 1 136 PHE 136 129 129 PHE PHE A . n A 1 137 ALA 137 130 130 ALA ALA A . n A 1 138 PRO 138 131 131 PRO PRO A . n A 1 139 GLU 139 132 132 GLU GLU A . n A 1 140 ARG 140 133 133 ARG ARG A . n A 1 141 TYR 141 134 134 TYR TYR A . n A 1 142 VAL 142 135 135 VAL VAL A . n A 1 143 TRP 143 136 136 TRP TRP A . n A 1 144 TYR 144 137 137 TYR TYR A . n A 1 145 ILE 145 138 138 ILE ILE A . n A 1 146 VAL 146 139 139 VAL VAL A . n A 1 147 SER 147 140 140 SER SER A . n A 1 148 CYS 148 141 141 CYS CYS A . n A 1 149 MET 149 142 142 MET MET A . n A 1 150 PHE 150 143 143 PHE PHE A . n A 1 151 GLU 151 144 144 GLU GLU A . n A 1 152 VAL 152 145 145 VAL VAL A . n A 1 153 ALA 153 146 146 ALA ALA A . n A 1 154 ILE 154 147 147 ILE ILE A . n A 1 155 PHE 155 148 148 PHE PHE A . n A 1 156 VAL 156 149 149 VAL VAL A . n A 1 157 ILE 157 150 150 ILE ILE A . n A 1 158 LEU 158 151 151 LEU LEU A . n A 1 159 LEU 159 152 152 LEU LEU A . n A 1 160 GLY 160 153 153 GLY GLY A . n A 1 161 ALA 161 154 154 ALA ALA A . n A 1 162 VAL 162 155 155 VAL VAL A . n A 1 163 ARG 163 156 156 ARG ARG A . n A 1 164 THR 164 157 157 THR THR A . n A 1 165 SER 165 158 158 SER SER A . n A 1 166 ALA 166 159 159 ALA ALA A . n A 1 167 MET 167 160 160 MET MET A . n A 1 168 ARG 168 161 161 ARG ARG A . n A 1 169 GLN 169 162 162 GLN GLN A . n A 1 170 HIS 170 163 163 HIS HIS A . n A 1 171 TYR 171 164 164 TYR TYR A . n A 1 172 ASP 172 165 165 ASP ASP A . n A 1 173 VAL 173 166 166 VAL VAL A . n A 1 174 LYS 174 167 167 LYS LYS A . n A 1 175 ASN 175 168 168 ASN ASN A . n A 1 176 LEU 176 169 169 LEU LEU A . n A 1 177 PHE 177 170 170 PHE PHE A . n A 1 178 ASN 178 171 171 ASN ASN A . n A 1 179 LEU 179 172 172 LEU LEU A . n A 1 180 VAL 180 173 173 VAL VAL A . n A 1 181 PHE 181 174 174 PHE PHE A . n A 1 182 THR 182 175 175 THR THR A . n A 1 183 VAL 183 176 176 VAL VAL A . n A 1 184 PHE 184 177 177 PHE PHE A . n A 1 185 SER 185 178 178 SER SER A . n A 1 186 ILE 186 179 179 ILE ILE A . n A 1 187 TYR 187 180 180 TYR TYR A . n A 1 188 PHE 188 181 181 PHE PHE A . n A 1 189 TRP 189 182 182 TRP TRP A . n A 1 190 ALA 190 183 183 ALA ALA A . n A 1 191 TYR 191 184 184 TYR TYR A . n A 1 192 PRO 192 185 185 PRO PRO A . n A 1 193 ILE 193 186 186 ILE ILE A . n A 1 194 VAL 194 187 187 VAL VAL A . n A 1 195 TRP 195 188 188 TRP TRP A . n A 1 196 ILE 196 189 189 ILE ILE A . n A 1 197 LEU 197 190 190 LEU LEU A . n A 1 198 GLY 198 191 191 GLY GLY A . n A 1 199 GLN 199 192 192 GLN GLN A . n A 1 200 LYS 200 193 193 LYS LYS A . n A 1 201 GLY 201 194 194 GLY GLY A . n A 1 202 VAL 202 195 195 VAL VAL A . n A 1 203 GLY 203 196 196 GLY GLY A . n A 1 204 LEU 204 197 197 LEU LEU A . n A 1 205 TYR 205 198 198 TYR TYR A . n A 1 206 GLY 206 199 199 GLY GLY A . n A 1 207 THR 207 200 200 THR THR A . n A 1 208 GLY 208 201 201 GLY GLY A . n A 1 209 VAL 209 202 202 VAL VAL A . n A 1 210 GLU 210 203 203 GLU GLU A . n A 1 211 SER 211 204 204 SER SER A . n A 1 212 LEU 212 205 205 LEU LEU A . n A 1 213 LEU 213 206 206 LEU LEU A . n A 1 214 ILE 214 207 207 ILE ILE A . n A 1 215 MET 215 208 208 MET MET A . n A 1 216 LEU 216 209 209 LEU LEU A . n A 1 217 LEU 217 210 210 LEU LEU A . n A 1 218 ASP 218 211 211 ASP ASP A . n A 1 219 ILE 219 212 212 ILE ILE A . n A 1 220 THR 220 213 213 THR THR A . n A 1 221 ALA 221 214 214 ALA ALA A . n A 1 222 LYS 222 215 215 LYS LYS A . n A 1 223 VAL 223 216 216 VAL VAL A . n A 1 224 PHE 224 217 217 PHE PHE A . n A 1 225 TYR 225 218 218 TYR TYR A . n A 1 226 GLY 226 219 219 GLY GLY A . n A 1 227 PHE 227 220 220 PHE PHE A . n A 1 228 LEU 228 221 221 LEU LEU A . n A 1 229 LEU 229 222 222 LEU LEU A . n A 1 230 LEU 230 223 223 LEU LEU A . n A 1 231 ARG 231 224 224 ARG ARG A . n A 1 232 ASP 232 225 225 ASP ASP A . n A 1 233 ARG 233 226 226 ARG ARG A . n A 1 234 GLU 234 227 227 GLU GLU A . n A 1 235 THR 235 228 228 THR THR A . n A 1 236 LEU 236 229 229 LEU LEU A . n A 1 237 GLN 237 230 230 GLN GLN A . n A 1 238 ARG 238 231 231 ARG ARG A . n A 1 239 MET 239 232 232 MET MET A . n A 1 240 GLY 240 233 233 GLY GLY A . n A 1 241 GLN 241 234 234 GLN GLN A . n A 1 242 LEU 242 235 235 LEU LEU A . n A 1 243 SER 243 236 236 SER SER A . n A 1 244 SER 244 237 ? ? ? A . n A 1 245 VAL 245 238 ? ? ? A . n A 1 246 PRO 246 239 ? ? ? A . n A 1 247 ASN 247 240 ? ? ? A . n A 1 248 SER 248 241 ? ? ? A . n A 1 249 GLY 249 242 ? ? ? A . n A 1 250 SER 250 243 ? ? ? A . n A 1 251 GLY 251 244 ? ? ? A . n A 1 252 VAL 252 245 ? ? ? A . n A 1 253 GLY 253 246 ? ? ? A . n A 1 254 ASN 254 247 ? ? ? A . n A 1 255 TYR 255 248 ? ? ? A . n A 1 256 ARG 256 249 ? ? ? A . n # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 2 mikako.shirouzu@riken.jp Mikako Shirouzu ? 'principal investigator/group leader' 0000-0002-7997-2149 3 tomomi@nih.go.jp Tomomi Kimura-Someya ? 'principal investigator/group leader' 0000-0003-2232-1801 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RET 1 301 301 RET RET A . C 3 PG4 1 302 601 PG4 PG4 A . D 4 HEX 1 303 1 HEX HEX A . E 4 HEX 1 304 3 HEX HEX A . F 4 HEX 1 305 4 HEX HEX A . G 5 OCT 1 306 1 OCT OCT A . H 5 OCT 1 307 2 OCT OCT A . I 5 OCT 1 308 3 OCT OCT A . J 6 C14 1 309 1 C14 C14 A . K 6 C14 1 310 2 C14 C14 A . L 7 R16 1 311 1 R16 R16 A . M 8 SO4 1 312 1 SO4 SO4 A . N 9 CL 1 313 1 CL CL A . O 10 HOH 1 401 524 HOH HOH A . O 10 HOH 2 402 402 HOH HOH A . O 10 HOH 3 403 417 HOH HOH A . O 10 HOH 4 404 518 HOH HOH A . O 10 HOH 5 405 428 HOH HOH A . O 10 HOH 6 406 403 HOH HOH A . O 10 HOH 7 407 525 HOH HOH A . O 10 HOH 8 408 401 HOH HOH A . O 10 HOH 9 409 502 HOH HOH A . O 10 HOH 10 410 519 HOH HOH A . O 10 HOH 11 411 435 HOH HOH A . O 10 HOH 12 412 429 HOH HOH A . O 10 HOH 13 413 406 HOH HOH A . O 10 HOH 14 414 517 HOH HOH A . O 10 HOH 15 415 526 HOH HOH A . O 10 HOH 16 416 423 HOH HOH A . O 10 HOH 17 417 426 HOH HOH A . O 10 HOH 18 418 512 HOH HOH A . O 10 HOH 19 419 421 HOH HOH A . O 10 HOH 20 420 433 HOH HOH A . O 10 HOH 21 421 407 HOH HOH A . O 10 HOH 22 422 430 HOH HOH A . O 10 HOH 23 423 424 HOH HOH A . O 10 HOH 24 424 420 HOH HOH A . O 10 HOH 25 425 404 HOH HOH A . O 10 HOH 26 426 440 HOH HOH A . O 10 HOH 27 427 425 HOH HOH A . O 10 HOH 28 428 436 HOH HOH A . O 10 HOH 29 429 422 HOH HOH A . O 10 HOH 30 430 414 HOH HOH A . O 10 HOH 31 431 431 HOH HOH A . O 10 HOH 32 432 521 HOH HOH A . O 10 HOH 33 433 520 HOH HOH A . O 10 HOH 34 434 503 HOH HOH A . O 10 HOH 35 435 515 HOH HOH A . O 10 HOH 36 436 513 HOH HOH A . O 10 HOH 37 437 439 HOH HOH A . O 10 HOH 38 438 516 HOH HOH A . O 10 HOH 39 439 405 HOH HOH A . O 10 HOH 40 440 434 HOH HOH A . O 10 HOH 41 441 514 HOH HOH A . O 10 HOH 42 442 427 HOH HOH A . O 10 HOH 43 443 437 HOH HOH A . O 10 HOH 44 444 523 HOH HOH A . O 10 HOH 45 445 432 HOH HOH A . O 10 HOH 46 446 522 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 15940 ? 1 MORE -162 ? 1 'SSA (A^2)' 29890 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5000000000 -0.8660254038 0.0000000000 31.5750000000 0.8660254038 -0.5000000000 0.0000000000 54.6895042490 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5000000000 0.8660254038 0.0000000000 -31.5750000000 -0.8660254038 -0.5000000000 0.0000000000 54.6895042490 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _pdbx_entry_details.entry_id 8H79 _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id VAL _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 216 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -99.77 _pdbx_validate_torsion.psi -61.21 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -6 ? A GLY 1 2 1 Y 1 A SER -5 ? A SER 2 3 1 Y 1 A SER -4 ? A SER 3 4 1 Y 1 A GLY -3 ? A GLY 4 5 1 Y 1 A SER -2 ? A SER 5 6 1 Y 1 A SER -1 ? A SER 6 7 1 Y 1 A GLY 0 ? A GLY 7 8 1 Y 1 A SER 237 ? A SER 244 9 1 Y 1 A VAL 238 ? A VAL 245 10 1 Y 1 A PRO 239 ? A PRO 246 11 1 Y 1 A ASN 240 ? A ASN 247 12 1 Y 1 A SER 241 ? A SER 248 13 1 Y 1 A GLY 242 ? A GLY 249 14 1 Y 1 A SER 243 ? A SER 250 15 1 Y 1 A GLY 244 ? A GLY 251 16 1 Y 1 A VAL 245 ? A VAL 252 17 1 Y 1 A GLY 246 ? A GLY 253 18 1 Y 1 A ASN 247 ? A ASN 254 19 1 Y 1 A TYR 248 ? A TYR 255 20 1 Y 1 A ARG 249 ? A ARG 256 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 C14 C01 C N N 74 C14 C02 C N N 75 C14 C03 C N N 76 C14 C04 C N N 77 C14 C05 C N N 78 C14 C06 C N N 79 C14 C07 C N N 80 C14 C08 C N N 81 C14 C09 C N N 82 C14 C10 C N N 83 C14 C11 C N N 84 C14 C12 C N N 85 C14 C13 C N N 86 C14 C14 C N N 87 C14 H011 H N N 88 C14 H012 H N N 89 C14 H013 H N N 90 C14 H021 H N N 91 C14 H022 H N N 92 C14 H031 H N N 93 C14 H032 H N N 94 C14 H041 H N N 95 C14 H042 H N N 96 C14 H051 H N N 97 C14 H052 H N N 98 C14 H061 H N N 99 C14 H062 H N N 100 C14 H071 H N N 101 C14 H072 H N N 102 C14 H081 H N N 103 C14 H082 H N N 104 C14 H091 H N N 105 C14 H092 H N N 106 C14 H101 H N N 107 C14 H102 H N N 108 C14 H111 H N N 109 C14 H112 H N N 110 C14 H121 H N N 111 C14 H122 H N N 112 C14 H131 H N N 113 C14 H132 H N N 114 C14 H141 H N N 115 C14 H142 H N N 116 C14 H143 H N N 117 CL CL CL N N 118 CYS N N N N 119 CYS CA C N R 120 CYS C C N N 121 CYS O O N N 122 CYS CB C N N 123 CYS SG S N N 124 CYS OXT O N N 125 CYS H H N N 126 CYS H2 H N N 127 CYS HA H N N 128 CYS HB2 H N N 129 CYS HB3 H N N 130 CYS HG H N N 131 CYS HXT H N N 132 GLN N N N N 133 GLN CA C N S 134 GLN C C N N 135 GLN O O N N 136 GLN CB C N N 137 GLN CG C N N 138 GLN CD C N N 139 GLN OE1 O N N 140 GLN NE2 N N N 141 GLN OXT O N N 142 GLN H H N N 143 GLN H2 H N N 144 GLN HA H N N 145 GLN HB2 H N N 146 GLN HB3 H N N 147 GLN HG2 H N N 148 GLN HG3 H N N 149 GLN HE21 H N N 150 GLN HE22 H N N 151 GLN HXT H N N 152 GLU N N N N 153 GLU CA C N S 154 GLU C C N N 155 GLU O O N N 156 GLU CB C N N 157 GLU CG C N N 158 GLU CD C N N 159 GLU OE1 O N N 160 GLU OE2 O N N 161 GLU OXT O N N 162 GLU H H N N 163 GLU H2 H N N 164 GLU HA H N N 165 GLU HB2 H N N 166 GLU HB3 H N N 167 GLU HG2 H N N 168 GLU HG3 H N N 169 GLU HE2 H N N 170 GLU HXT H N N 171 GLY N N N N 172 GLY CA C N N 173 GLY C C N N 174 GLY O O N N 175 GLY OXT O N N 176 GLY H H N N 177 GLY H2 H N N 178 GLY HA2 H N N 179 GLY HA3 H N N 180 GLY HXT H N N 181 HEX C1 C N N 182 HEX C2 C N N 183 HEX C3 C N N 184 HEX C4 C N N 185 HEX C5 C N N 186 HEX C6 C N N 187 HEX H11 H N N 188 HEX H12 H N N 189 HEX H13 H N N 190 HEX H21 H N N 191 HEX H22 H N N 192 HEX H31 H N N 193 HEX H32 H N N 194 HEX H41 H N N 195 HEX H42 H N N 196 HEX H51 H N N 197 HEX H52 H N N 198 HEX H61 H N N 199 HEX H62 H N N 200 HEX H63 H N N 201 HIS N N N N 202 HIS CA C N S 203 HIS C C N N 204 HIS O O N N 205 HIS CB C N N 206 HIS CG C Y N 207 HIS ND1 N Y N 208 HIS CD2 C Y N 209 HIS CE1 C Y N 210 HIS NE2 N Y N 211 HIS OXT O N N 212 HIS H H N N 213 HIS H2 H N N 214 HIS HA H N N 215 HIS HB2 H N N 216 HIS HB3 H N N 217 HIS HD1 H N N 218 HIS HD2 H N N 219 HIS HE1 H N N 220 HIS HE2 H N N 221 HIS HXT H N N 222 HOH O O N N 223 HOH H1 H N N 224 HOH H2 H N N 225 ILE N N N N 226 ILE CA C N S 227 ILE C C N N 228 ILE O O N N 229 ILE CB C N S 230 ILE CG1 C N N 231 ILE CG2 C N N 232 ILE CD1 C N N 233 ILE OXT O N N 234 ILE H H N N 235 ILE H2 H N N 236 ILE HA H N N 237 ILE HB H N N 238 ILE HG12 H N N 239 ILE HG13 H N N 240 ILE HG21 H N N 241 ILE HG22 H N N 242 ILE HG23 H N N 243 ILE HD11 H N N 244 ILE HD12 H N N 245 ILE HD13 H N N 246 ILE HXT H N N 247 LEU N N N N 248 LEU CA C N S 249 LEU C C N N 250 LEU O O N N 251 LEU CB C N N 252 LEU CG C N N 253 LEU CD1 C N N 254 LEU CD2 C N N 255 LEU OXT O N N 256 LEU H H N N 257 LEU H2 H N N 258 LEU HA H N N 259 LEU HB2 H N N 260 LEU HB3 H N N 261 LEU HG H N N 262 LEU HD11 H N N 263 LEU HD12 H N N 264 LEU HD13 H N N 265 LEU HD21 H N N 266 LEU HD22 H N N 267 LEU HD23 H N N 268 LEU HXT H N N 269 LYS N N N N 270 LYS CA C N S 271 LYS C C N N 272 LYS O O N N 273 LYS CB C N N 274 LYS CG C N N 275 LYS CD C N N 276 LYS CE C N N 277 LYS NZ N N N 278 LYS OXT O N N 279 LYS H H N N 280 LYS H2 H N N 281 LYS HA H N N 282 LYS HB2 H N N 283 LYS HB3 H N N 284 LYS HG2 H N N 285 LYS HG3 H N N 286 LYS HD2 H N N 287 LYS HD3 H N N 288 LYS HE2 H N N 289 LYS HE3 H N N 290 LYS HZ1 H N N 291 LYS HZ2 H N N 292 LYS HZ3 H N N 293 LYS HXT H N N 294 MET N N N N 295 MET CA C N S 296 MET C C N N 297 MET O O N N 298 MET CB C N N 299 MET CG C N N 300 MET SD S N N 301 MET CE C N N 302 MET OXT O N N 303 MET H H N N 304 MET H2 H N N 305 MET HA H N N 306 MET HB2 H N N 307 MET HB3 H N N 308 MET HG2 H N N 309 MET HG3 H N N 310 MET HE1 H N N 311 MET HE2 H N N 312 MET HE3 H N N 313 MET HXT H N N 314 OCT C1 C N N 315 OCT C2 C N N 316 OCT C3 C N N 317 OCT C4 C N N 318 OCT C5 C N N 319 OCT C6 C N N 320 OCT C7 C N N 321 OCT C8 C N N 322 OCT H11 H N N 323 OCT H12 H N N 324 OCT H13 H N N 325 OCT H21 H N N 326 OCT H22 H N N 327 OCT H31 H N N 328 OCT H32 H N N 329 OCT H41 H N N 330 OCT H42 H N N 331 OCT H51 H N N 332 OCT H52 H N N 333 OCT H61 H N N 334 OCT H62 H N N 335 OCT H71 H N N 336 OCT H72 H N N 337 OCT H81 H N N 338 OCT H82 H N N 339 OCT H83 H N N 340 PG4 O1 O N N 341 PG4 C1 C N N 342 PG4 C2 C N N 343 PG4 O2 O N N 344 PG4 C3 C N N 345 PG4 C4 C N N 346 PG4 O3 O N N 347 PG4 C5 C N N 348 PG4 C6 C N N 349 PG4 O4 O N N 350 PG4 C7 C N N 351 PG4 C8 C N N 352 PG4 O5 O N N 353 PG4 HO1 H N N 354 PG4 H11 H N N 355 PG4 H12 H N N 356 PG4 H21 H N N 357 PG4 H22 H N N 358 PG4 H31 H N N 359 PG4 H32 H N N 360 PG4 H41 H N N 361 PG4 H42 H N N 362 PG4 H51 H N N 363 PG4 H52 H N N 364 PG4 H61 H N N 365 PG4 H62 H N N 366 PG4 H71 H N N 367 PG4 H72 H N N 368 PG4 H81 H N N 369 PG4 H82 H N N 370 PG4 HO5 H N N 371 PHE N N N N 372 PHE CA C N S 373 PHE C C N N 374 PHE O O N N 375 PHE CB C N N 376 PHE CG C Y N 377 PHE CD1 C Y N 378 PHE CD2 C Y N 379 PHE CE1 C Y N 380 PHE CE2 C Y N 381 PHE CZ C Y N 382 PHE OXT O N N 383 PHE H H N N 384 PHE H2 H N N 385 PHE HA H N N 386 PHE HB2 H N N 387 PHE HB3 H N N 388 PHE HD1 H N N 389 PHE HD2 H N N 390 PHE HE1 H N N 391 PHE HE2 H N N 392 PHE HZ H N N 393 PHE HXT H N N 394 PRO N N N N 395 PRO CA C N S 396 PRO C C N N 397 PRO O O N N 398 PRO CB C N N 399 PRO CG C N N 400 PRO CD C N N 401 PRO OXT O N N 402 PRO H H N N 403 PRO HA H N N 404 PRO HB2 H N N 405 PRO HB3 H N N 406 PRO HG2 H N N 407 PRO HG3 H N N 408 PRO HD2 H N N 409 PRO HD3 H N N 410 PRO HXT H N N 411 R16 C27 C N N 412 R16 C28 C N N 413 R16 C29 C N N 414 R16 C30 C N N 415 R16 C31 C N N 416 R16 C32 C N N 417 R16 C33 C N N 418 R16 C34 C N N 419 R16 C35 C N N 420 R16 C36 C N N 421 R16 C37 C N N 422 R16 C38 C N N 423 R16 C39 C N N 424 R16 C40 C N N 425 R16 C41 C N N 426 R16 C42 C N N 427 R16 H271 H N N 428 R16 H272 H N N 429 R16 H273 H N N 430 R16 H281 H N N 431 R16 H282 H N N 432 R16 H291 H N N 433 R16 H292 H N N 434 R16 H301 H N N 435 R16 H302 H N N 436 R16 H311 H N N 437 R16 H312 H N N 438 R16 H321 H N N 439 R16 H322 H N N 440 R16 H331 H N N 441 R16 H332 H N N 442 R16 H341 H N N 443 R16 H342 H N N 444 R16 H351 H N N 445 R16 H352 H N N 446 R16 H361 H N N 447 R16 H362 H N N 448 R16 H371 H N N 449 R16 H372 H N N 450 R16 H381 H N N 451 R16 H382 H N N 452 R16 H391 H N N 453 R16 H392 H N N 454 R16 H401 H N N 455 R16 H402 H N N 456 R16 H411 H N N 457 R16 H412 H N N 458 R16 H421 H N N 459 R16 H422 H N N 460 R16 H423 H N N 461 RET C1 C N N 462 RET C2 C N N 463 RET C3 C N N 464 RET C4 C N N 465 RET C5 C N N 466 RET C6 C N N 467 RET C7 C N N 468 RET C8 C N N 469 RET C9 C N N 470 RET C10 C N N 471 RET C11 C N N 472 RET C12 C N N 473 RET C13 C N N 474 RET C14 C N N 475 RET C15 C N N 476 RET O1 O N N 477 RET C16 C N N 478 RET C17 C N N 479 RET C18 C N N 480 RET C19 C N N 481 RET C20 C N N 482 RET H21 H N N 483 RET H22 H N N 484 RET H31 H N N 485 RET H32 H N N 486 RET H41 H N N 487 RET H42 H N N 488 RET H7 H N N 489 RET H8 H N N 490 RET H10 H N N 491 RET H11 H N N 492 RET H12 H N N 493 RET H14 H N N 494 RET H15 H N N 495 RET H161 H N N 496 RET H162 H N N 497 RET H163 H N N 498 RET H171 H N N 499 RET H172 H N N 500 RET H173 H N N 501 RET H181 H N N 502 RET H182 H N N 503 RET H183 H N N 504 RET H191 H N N 505 RET H192 H N N 506 RET H193 H N N 507 RET H201 H N N 508 RET H202 H N N 509 RET H203 H N N 510 SER N N N N 511 SER CA C N S 512 SER C C N N 513 SER O O N N 514 SER CB C N N 515 SER OG O N N 516 SER OXT O N N 517 SER H H N N 518 SER H2 H N N 519 SER HA H N N 520 SER HB2 H N N 521 SER HB3 H N N 522 SER HG H N N 523 SER HXT H N N 524 SO4 S S N N 525 SO4 O1 O N N 526 SO4 O2 O N N 527 SO4 O3 O N N 528 SO4 O4 O N N 529 THR N N N N 530 THR CA C N S 531 THR C C N N 532 THR O O N N 533 THR CB C N R 534 THR OG1 O N N 535 THR CG2 C N N 536 THR OXT O N N 537 THR H H N N 538 THR H2 H N N 539 THR HA H N N 540 THR HB H N N 541 THR HG1 H N N 542 THR HG21 H N N 543 THR HG22 H N N 544 THR HG23 H N N 545 THR HXT H N N 546 TRP N N N N 547 TRP CA C N S 548 TRP C C N N 549 TRP O O N N 550 TRP CB C N N 551 TRP CG C Y N 552 TRP CD1 C Y N 553 TRP CD2 C Y N 554 TRP NE1 N Y N 555 TRP CE2 C Y N 556 TRP CE3 C Y N 557 TRP CZ2 C Y N 558 TRP CZ3 C Y N 559 TRP CH2 C Y N 560 TRP OXT O N N 561 TRP H H N N 562 TRP H2 H N N 563 TRP HA H N N 564 TRP HB2 H N N 565 TRP HB3 H N N 566 TRP HD1 H N N 567 TRP HE1 H N N 568 TRP HE3 H N N 569 TRP HZ2 H N N 570 TRP HZ3 H N N 571 TRP HH2 H N N 572 TRP HXT H N N 573 TYR N N N N 574 TYR CA C N S 575 TYR C C N N 576 TYR O O N N 577 TYR CB C N N 578 TYR CG C Y N 579 TYR CD1 C Y N 580 TYR CD2 C Y N 581 TYR CE1 C Y N 582 TYR CE2 C Y N 583 TYR CZ C Y N 584 TYR OH O N N 585 TYR OXT O N N 586 TYR H H N N 587 TYR H2 H N N 588 TYR HA H N N 589 TYR HB2 H N N 590 TYR HB3 H N N 591 TYR HD1 H N N 592 TYR HD2 H N N 593 TYR HE1 H N N 594 TYR HE2 H N N 595 TYR HH H N N 596 TYR HXT H N N 597 VAL N N N N 598 VAL CA C N S 599 VAL C C N N 600 VAL O O N N 601 VAL CB C N N 602 VAL CG1 C N N 603 VAL CG2 C N N 604 VAL OXT O N N 605 VAL H H N N 606 VAL H2 H N N 607 VAL HA H N N 608 VAL HB H N N 609 VAL HG11 H N N 610 VAL HG12 H N N 611 VAL HG13 H N N 612 VAL HG21 H N N 613 VAL HG22 H N N 614 VAL HG23 H N N 615 VAL HXT H N N 616 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 C14 C01 C02 sing N N 70 C14 C01 H011 sing N N 71 C14 C01 H012 sing N N 72 C14 C01 H013 sing N N 73 C14 C02 C03 sing N N 74 C14 C02 H021 sing N N 75 C14 C02 H022 sing N N 76 C14 C03 C04 sing N N 77 C14 C03 H031 sing N N 78 C14 C03 H032 sing N N 79 C14 C04 C05 sing N N 80 C14 C04 H041 sing N N 81 C14 C04 H042 sing N N 82 C14 C05 C06 sing N N 83 C14 C05 H051 sing N N 84 C14 C05 H052 sing N N 85 C14 C06 C07 sing N N 86 C14 C06 H061 sing N N 87 C14 C06 H062 sing N N 88 C14 C07 C08 sing N N 89 C14 C07 H071 sing N N 90 C14 C07 H072 sing N N 91 C14 C08 C09 sing N N 92 C14 C08 H081 sing N N 93 C14 C08 H082 sing N N 94 C14 C09 C10 sing N N 95 C14 C09 H091 sing N N 96 C14 C09 H092 sing N N 97 C14 C10 C11 sing N N 98 C14 C10 H101 sing N N 99 C14 C10 H102 sing N N 100 C14 C11 C12 sing N N 101 C14 C11 H111 sing N N 102 C14 C11 H112 sing N N 103 C14 C12 C13 sing N N 104 C14 C12 H121 sing N N 105 C14 C12 H122 sing N N 106 C14 C13 C14 sing N N 107 C14 C13 H131 sing N N 108 C14 C13 H132 sing N N 109 C14 C14 H141 sing N N 110 C14 C14 H142 sing N N 111 C14 C14 H143 sing N N 112 CYS N CA sing N N 113 CYS N H sing N N 114 CYS N H2 sing N N 115 CYS CA C sing N N 116 CYS CA CB sing N N 117 CYS CA HA sing N N 118 CYS C O doub N N 119 CYS C OXT sing N N 120 CYS CB SG sing N N 121 CYS CB HB2 sing N N 122 CYS CB HB3 sing N N 123 CYS SG HG sing N N 124 CYS OXT HXT sing N N 125 GLN N CA sing N N 126 GLN N H sing N N 127 GLN N H2 sing N N 128 GLN CA C sing N N 129 GLN CA CB sing N N 130 GLN CA HA sing N N 131 GLN C O doub N N 132 GLN C OXT sing N N 133 GLN CB CG sing N N 134 GLN CB HB2 sing N N 135 GLN CB HB3 sing N N 136 GLN CG CD sing N N 137 GLN CG HG2 sing N N 138 GLN CG HG3 sing N N 139 GLN CD OE1 doub N N 140 GLN CD NE2 sing N N 141 GLN NE2 HE21 sing N N 142 GLN NE2 HE22 sing N N 143 GLN OXT HXT sing N N 144 GLU N CA sing N N 145 GLU N H sing N N 146 GLU N H2 sing N N 147 GLU CA C sing N N 148 GLU CA CB sing N N 149 GLU CA HA sing N N 150 GLU C O doub N N 151 GLU C OXT sing N N 152 GLU CB CG sing N N 153 GLU CB HB2 sing N N 154 GLU CB HB3 sing N N 155 GLU CG CD sing N N 156 GLU CG HG2 sing N N 157 GLU CG HG3 sing N N 158 GLU CD OE1 doub N N 159 GLU CD OE2 sing N N 160 GLU OE2 HE2 sing N N 161 GLU OXT HXT sing N N 162 GLY N CA sing N N 163 GLY N H sing N N 164 GLY N H2 sing N N 165 GLY CA C sing N N 166 GLY CA HA2 sing N N 167 GLY CA HA3 sing N N 168 GLY C O doub N N 169 GLY C OXT sing N N 170 GLY OXT HXT sing N N 171 HEX C1 C2 sing N N 172 HEX C1 H11 sing N N 173 HEX C1 H12 sing N N 174 HEX C1 H13 sing N N 175 HEX C2 C3 sing N N 176 HEX C2 H21 sing N N 177 HEX C2 H22 sing N N 178 HEX C3 C4 sing N N 179 HEX C3 H31 sing N N 180 HEX C3 H32 sing N N 181 HEX C4 C5 sing N N 182 HEX C4 H41 sing N N 183 HEX C4 H42 sing N N 184 HEX C5 C6 sing N N 185 HEX C5 H51 sing N N 186 HEX C5 H52 sing N N 187 HEX C6 H61 sing N N 188 HEX C6 H62 sing N N 189 HEX C6 H63 sing N N 190 HIS N CA sing N N 191 HIS N H sing N N 192 HIS N H2 sing N N 193 HIS CA C sing N N 194 HIS CA CB sing N N 195 HIS CA HA sing N N 196 HIS C O doub N N 197 HIS C OXT sing N N 198 HIS CB CG sing N N 199 HIS CB HB2 sing N N 200 HIS CB HB3 sing N N 201 HIS CG ND1 sing Y N 202 HIS CG CD2 doub Y N 203 HIS ND1 CE1 doub Y N 204 HIS ND1 HD1 sing N N 205 HIS CD2 NE2 sing Y N 206 HIS CD2 HD2 sing N N 207 HIS CE1 NE2 sing Y N 208 HIS CE1 HE1 sing N N 209 HIS NE2 HE2 sing N N 210 HIS OXT HXT sing N N 211 HOH O H1 sing N N 212 HOH O H2 sing N N 213 ILE N CA sing N N 214 ILE N H sing N N 215 ILE N H2 sing N N 216 ILE CA C sing N N 217 ILE CA CB sing N N 218 ILE CA HA sing N N 219 ILE C O doub N N 220 ILE C OXT sing N N 221 ILE CB CG1 sing N N 222 ILE CB CG2 sing N N 223 ILE CB HB sing N N 224 ILE CG1 CD1 sing N N 225 ILE CG1 HG12 sing N N 226 ILE CG1 HG13 sing N N 227 ILE CG2 HG21 sing N N 228 ILE CG2 HG22 sing N N 229 ILE CG2 HG23 sing N N 230 ILE CD1 HD11 sing N N 231 ILE CD1 HD12 sing N N 232 ILE CD1 HD13 sing N N 233 ILE OXT HXT sing N N 234 LEU N CA sing N N 235 LEU N H sing N N 236 LEU N H2 sing N N 237 LEU CA C sing N N 238 LEU CA CB sing N N 239 LEU CA HA sing N N 240 LEU C O doub N N 241 LEU C OXT sing N N 242 LEU CB CG sing N N 243 LEU CB HB2 sing N N 244 LEU CB HB3 sing N N 245 LEU CG CD1 sing N N 246 LEU CG CD2 sing N N 247 LEU CG HG sing N N 248 LEU CD1 HD11 sing N N 249 LEU CD1 HD12 sing N N 250 LEU CD1 HD13 sing N N 251 LEU CD2 HD21 sing N N 252 LEU CD2 HD22 sing N N 253 LEU CD2 HD23 sing N N 254 LEU OXT HXT sing N N 255 LYS N CA sing N N 256 LYS N H sing N N 257 LYS N H2 sing N N 258 LYS CA C sing N N 259 LYS CA CB sing N N 260 LYS CA HA sing N N 261 LYS C O doub N N 262 LYS C OXT sing N N 263 LYS CB CG sing N N 264 LYS CB HB2 sing N N 265 LYS CB HB3 sing N N 266 LYS CG CD sing N N 267 LYS CG HG2 sing N N 268 LYS CG HG3 sing N N 269 LYS CD CE sing N N 270 LYS CD HD2 sing N N 271 LYS CD HD3 sing N N 272 LYS CE NZ sing N N 273 LYS CE HE2 sing N N 274 LYS CE HE3 sing N N 275 LYS NZ HZ1 sing N N 276 LYS NZ HZ2 sing N N 277 LYS NZ HZ3 sing N N 278 LYS OXT HXT sing N N 279 MET N CA sing N N 280 MET N H sing N N 281 MET N H2 sing N N 282 MET CA C sing N N 283 MET CA CB sing N N 284 MET CA HA sing N N 285 MET C O doub N N 286 MET C OXT sing N N 287 MET CB CG sing N N 288 MET CB HB2 sing N N 289 MET CB HB3 sing N N 290 MET CG SD sing N N 291 MET CG HG2 sing N N 292 MET CG HG3 sing N N 293 MET SD CE sing N N 294 MET CE HE1 sing N N 295 MET CE HE2 sing N N 296 MET CE HE3 sing N N 297 MET OXT HXT sing N N 298 OCT C1 C2 sing N N 299 OCT C1 H11 sing N N 300 OCT C1 H12 sing N N 301 OCT C1 H13 sing N N 302 OCT C2 C3 sing N N 303 OCT C2 H21 sing N N 304 OCT C2 H22 sing N N 305 OCT C3 C4 sing N N 306 OCT C3 H31 sing N N 307 OCT C3 H32 sing N N 308 OCT C4 C5 sing N N 309 OCT C4 H41 sing N N 310 OCT C4 H42 sing N N 311 OCT C5 C6 sing N N 312 OCT C5 H51 sing N N 313 OCT C5 H52 sing N N 314 OCT C6 C7 sing N N 315 OCT C6 H61 sing N N 316 OCT C6 H62 sing N N 317 OCT C7 C8 sing N N 318 OCT C7 H71 sing N N 319 OCT C7 H72 sing N N 320 OCT C8 H81 sing N N 321 OCT C8 H82 sing N N 322 OCT C8 H83 sing N N 323 PG4 O1 C1 sing N N 324 PG4 O1 HO1 sing N N 325 PG4 C1 C2 sing N N 326 PG4 C1 H11 sing N N 327 PG4 C1 H12 sing N N 328 PG4 C2 O2 sing N N 329 PG4 C2 H21 sing N N 330 PG4 C2 H22 sing N N 331 PG4 O2 C3 sing N N 332 PG4 C3 C4 sing N N 333 PG4 C3 H31 sing N N 334 PG4 C3 H32 sing N N 335 PG4 C4 O3 sing N N 336 PG4 C4 H41 sing N N 337 PG4 C4 H42 sing N N 338 PG4 O3 C5 sing N N 339 PG4 C5 C6 sing N N 340 PG4 C5 H51 sing N N 341 PG4 C5 H52 sing N N 342 PG4 C6 O4 sing N N 343 PG4 C6 H61 sing N N 344 PG4 C6 H62 sing N N 345 PG4 O4 C7 sing N N 346 PG4 C7 C8 sing N N 347 PG4 C7 H71 sing N N 348 PG4 C7 H72 sing N N 349 PG4 C8 O5 sing N N 350 PG4 C8 H81 sing N N 351 PG4 C8 H82 sing N N 352 PG4 O5 HO5 sing N N 353 PHE N CA sing N N 354 PHE N H sing N N 355 PHE N H2 sing N N 356 PHE CA C sing N N 357 PHE CA CB sing N N 358 PHE CA HA sing N N 359 PHE C O doub N N 360 PHE C OXT sing N N 361 PHE CB CG sing N N 362 PHE CB HB2 sing N N 363 PHE CB HB3 sing N N 364 PHE CG CD1 doub Y N 365 PHE CG CD2 sing Y N 366 PHE CD1 CE1 sing Y N 367 PHE CD1 HD1 sing N N 368 PHE CD2 CE2 doub Y N 369 PHE CD2 HD2 sing N N 370 PHE CE1 CZ doub Y N 371 PHE CE1 HE1 sing N N 372 PHE CE2 CZ sing Y N 373 PHE CE2 HE2 sing N N 374 PHE CZ HZ sing N N 375 PHE OXT HXT sing N N 376 PRO N CA sing N N 377 PRO N CD sing N N 378 PRO N H sing N N 379 PRO CA C sing N N 380 PRO CA CB sing N N 381 PRO CA HA sing N N 382 PRO C O doub N N 383 PRO C OXT sing N N 384 PRO CB CG sing N N 385 PRO CB HB2 sing N N 386 PRO CB HB3 sing N N 387 PRO CG CD sing N N 388 PRO CG HG2 sing N N 389 PRO CG HG3 sing N N 390 PRO CD HD2 sing N N 391 PRO CD HD3 sing N N 392 PRO OXT HXT sing N N 393 R16 C27 C28 sing N N 394 R16 C27 H271 sing N N 395 R16 C27 H272 sing N N 396 R16 C27 H273 sing N N 397 R16 C28 C29 sing N N 398 R16 C28 H281 sing N N 399 R16 C28 H282 sing N N 400 R16 C29 C30 sing N N 401 R16 C29 H291 sing N N 402 R16 C29 H292 sing N N 403 R16 C30 C31 sing N N 404 R16 C30 H301 sing N N 405 R16 C30 H302 sing N N 406 R16 C31 C32 sing N N 407 R16 C31 H311 sing N N 408 R16 C31 H312 sing N N 409 R16 C32 C33 sing N N 410 R16 C32 H321 sing N N 411 R16 C32 H322 sing N N 412 R16 C33 C34 sing N N 413 R16 C33 H331 sing N N 414 R16 C33 H332 sing N N 415 R16 C34 C35 sing N N 416 R16 C34 H341 sing N N 417 R16 C34 H342 sing N N 418 R16 C35 C36 sing N N 419 R16 C35 H351 sing N N 420 R16 C35 H352 sing N N 421 R16 C36 C37 sing N N 422 R16 C36 H361 sing N N 423 R16 C36 H362 sing N N 424 R16 C37 C38 sing N N 425 R16 C37 H371 sing N N 426 R16 C37 H372 sing N N 427 R16 C38 C39 sing N N 428 R16 C38 H381 sing N N 429 R16 C38 H382 sing N N 430 R16 C39 C40 sing N N 431 R16 C39 H391 sing N N 432 R16 C39 H392 sing N N 433 R16 C40 C41 sing N N 434 R16 C40 H401 sing N N 435 R16 C40 H402 sing N N 436 R16 C41 C42 sing N N 437 R16 C41 H411 sing N N 438 R16 C41 H412 sing N N 439 R16 C42 H421 sing N N 440 R16 C42 H422 sing N N 441 R16 C42 H423 sing N N 442 RET C1 C2 sing N N 443 RET C1 C6 sing N N 444 RET C1 C16 sing N N 445 RET C1 C17 sing N N 446 RET C2 C3 sing N N 447 RET C2 H21 sing N N 448 RET C2 H22 sing N N 449 RET C3 C4 sing N N 450 RET C3 H31 sing N N 451 RET C3 H32 sing N N 452 RET C4 C5 sing N N 453 RET C4 H41 sing N N 454 RET C4 H42 sing N N 455 RET C5 C6 doub N N 456 RET C5 C18 sing N N 457 RET C6 C7 sing N N 458 RET C7 C8 doub N E 459 RET C7 H7 sing N N 460 RET C8 C9 sing N N 461 RET C8 H8 sing N N 462 RET C9 C10 doub N E 463 RET C9 C19 sing N N 464 RET C10 C11 sing N N 465 RET C10 H10 sing N N 466 RET C11 C12 doub N E 467 RET C11 H11 sing N N 468 RET C12 C13 sing N N 469 RET C12 H12 sing N N 470 RET C13 C14 doub N E 471 RET C13 C20 sing N N 472 RET C14 C15 sing N N 473 RET C14 H14 sing N N 474 RET C15 O1 doub N N 475 RET C15 H15 sing N N 476 RET C16 H161 sing N N 477 RET C16 H162 sing N N 478 RET C16 H163 sing N N 479 RET C17 H171 sing N N 480 RET C17 H172 sing N N 481 RET C17 H173 sing N N 482 RET C18 H181 sing N N 483 RET C18 H182 sing N N 484 RET C18 H183 sing N N 485 RET C19 H191 sing N N 486 RET C19 H192 sing N N 487 RET C19 H193 sing N N 488 RET C20 H201 sing N N 489 RET C20 H202 sing N N 490 RET C20 H203 sing N N 491 SER N CA sing N N 492 SER N H sing N N 493 SER N H2 sing N N 494 SER CA C sing N N 495 SER CA CB sing N N 496 SER CA HA sing N N 497 SER C O doub N N 498 SER C OXT sing N N 499 SER CB OG sing N N 500 SER CB HB2 sing N N 501 SER CB HB3 sing N N 502 SER OG HG sing N N 503 SER OXT HXT sing N N 504 SO4 S O1 doub N N 505 SO4 S O2 doub N N 506 SO4 S O3 sing N N 507 SO4 S O4 sing N N 508 THR N CA sing N N 509 THR N H sing N N 510 THR N H2 sing N N 511 THR CA C sing N N 512 THR CA CB sing N N 513 THR CA HA sing N N 514 THR C O doub N N 515 THR C OXT sing N N 516 THR CB OG1 sing N N 517 THR CB CG2 sing N N 518 THR CB HB sing N N 519 THR OG1 HG1 sing N N 520 THR CG2 HG21 sing N N 521 THR CG2 HG22 sing N N 522 THR CG2 HG23 sing N N 523 THR OXT HXT sing N N 524 TRP N CA sing N N 525 TRP N H sing N N 526 TRP N H2 sing N N 527 TRP CA C sing N N 528 TRP CA CB sing N N 529 TRP CA HA sing N N 530 TRP C O doub N N 531 TRP C OXT sing N N 532 TRP CB CG sing N N 533 TRP CB HB2 sing N N 534 TRP CB HB3 sing N N 535 TRP CG CD1 doub Y N 536 TRP CG CD2 sing Y N 537 TRP CD1 NE1 sing Y N 538 TRP CD1 HD1 sing N N 539 TRP CD2 CE2 doub Y N 540 TRP CD2 CE3 sing Y N 541 TRP NE1 CE2 sing Y N 542 TRP NE1 HE1 sing N N 543 TRP CE2 CZ2 sing Y N 544 TRP CE3 CZ3 doub Y N 545 TRP CE3 HE3 sing N N 546 TRP CZ2 CH2 doub Y N 547 TRP CZ2 HZ2 sing N N 548 TRP CZ3 CH2 sing Y N 549 TRP CZ3 HZ3 sing N N 550 TRP CH2 HH2 sing N N 551 TRP OXT HXT sing N N 552 TYR N CA sing N N 553 TYR N H sing N N 554 TYR N H2 sing N N 555 TYR CA C sing N N 556 TYR CA CB sing N N 557 TYR CA HA sing N N 558 TYR C O doub N N 559 TYR C OXT sing N N 560 TYR CB CG sing N N 561 TYR CB HB2 sing N N 562 TYR CB HB3 sing N N 563 TYR CG CD1 doub Y N 564 TYR CG CD2 sing Y N 565 TYR CD1 CE1 sing Y N 566 TYR CD1 HD1 sing N N 567 TYR CD2 CE2 doub Y N 568 TYR CD2 HD2 sing N N 569 TYR CE1 CZ doub Y N 570 TYR CE1 HE1 sing N N 571 TYR CE2 CZ sing Y N 572 TYR CE2 HE2 sing N N 573 TYR CZ OH sing N N 574 TYR OH HH sing N N 575 TYR OXT HXT sing N N 576 VAL N CA sing N N 577 VAL N H sing N N 578 VAL N H2 sing N N 579 VAL CA C sing N N 580 VAL CA CB sing N N 581 VAL CA HA sing N N 582 VAL C O doub N N 583 VAL C OXT sing N N 584 VAL CB CG1 sing N N 585 VAL CB CG2 sing N N 586 VAL CB HB sing N N 587 VAL CG1 HG11 sing N N 588 VAL CG1 HG12 sing N N 589 VAL CG1 HG13 sing N N 590 VAL CG2 HG21 sing N N 591 VAL CG2 HG22 sing N N 592 VAL CG2 HG23 sing N N 593 VAL OXT HXT sing N N 594 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Japan Society for the Promotion of Science (JSPS)' Japan 17K07324 1 'Japan Society for the Promotion of Science (JSPS)' Japan 20H05450 2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 RETINAL RET 3 'TETRAETHYLENE GLYCOL' PG4 4 HEXANE HEX 5 N-OCTANE OCT 6 TETRADECANE C14 7 HEXADECANE R16 8 'SULFATE ION' SO4 9 'CHLORIDE ION' CL 10 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #