HEADER CELL ADHESION 01-NOV-22 8HC0 TITLE CRYSTAL STRUCTURE OF THE EXTRACELLULAR DOMAINS OF GPR110 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADHESION G-PROTEIN COUPLED RECEPTOR F1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: G PROTEIN-COUPLED RECEPTOR 110,G PROTEIN-COUPLED RECEPTOR COMPND 5 KPG_012,G PROTEIN-COUPLED RECEPTOR PGR19; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ADHESION G-PROTEIN COUPLED RECEPTOR F1; COMPND 9 CHAIN: C; COMPND 10 FRAGMENT: C-TERMINAL; COMPND 11 SYNONYM: G PROTEIN-COUPLED RECEPTOR 110,G PROTEIN-COUPLED RECEPTOR COMPND 12 KPG_012,G PROTEIN-COUPLED RECEPTOR PGR19; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: ADHESION G-PROTEIN COUPLED RECEPTOR F1; COMPND 16 CHAIN: B; COMPND 17 FRAGMENT: N-TERMINAL; COMPND 18 SYNONYM: G PROTEIN-COUPLED RECEPTOR 110,G PROTEIN-COUPLED RECEPTOR COMPND 19 KPG_012,G PROTEIN-COUPLED RECEPTOR PGR19; COMPND 20 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ADGRF1, GPR110, PGR19; SOURCE 6 EXPRESSION_SYSTEM: MAMMALIAN EXPRESSION VECTOR FLAG-MCS-PCDNA3.1; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 2021188; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293GNT-; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: ADGRF1, GPR110, PGR19; SOURCE 14 EXPRESSION_SYSTEM: MAMMALIAN EXPRESSION VECTOR FLAG-MCS-PCDNA3.1; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 2021188; SOURCE 16 EXPRESSION_SYSTEM_CELL_LINE: HEK293GNT-; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 19 ORGANISM_COMMON: HUMAN; SOURCE 20 ORGANISM_TAXID: 9606; SOURCE 21 GENE: ADGRF1, GPR110, PGR19; SOURCE 22 EXPRESSION_SYSTEM: MAMMALIAN EXPRESSION VECTOR FLAG-MCS-PCDNA3.1; SOURCE 23 EXPRESSION_SYSTEM_TAXID: 2021188; SOURCE 24 EXPRESSION_SYSTEM_CELL_LINE: HEK293GNT- KEYWDS ADHESION GPCR, GPR110, SYNAPTAMIDE, MOLECULAR DYNAMICS SIMULATIONS, KEYWDS 2 CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR F.F.WANG,G.J.SONG REVDAT 3 01-MAY-24 8HC0 1 JRNL REVDAT 2 20-SEP-23 8HC0 1 REMARK REVDAT 1 13-SEP-23 8HC0 0 JRNL AUTH F.WANG,Y.WANG,W.QIU,Q.ZHANG,H.YANG,G.SONG JRNL TITL CRYSTAL STRUCTURE OF THE EXTRACELLULAR DOMAINS OF GPR110. JRNL REF J.MOL.BIOL. V. 435 67979 2023 JRNL REFN ESSN 1089-8638 JRNL PMID 36716818 JRNL DOI 10.1016/J.JMB.2023.167979 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX PHENIX-1.19.2-4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.80 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 3 NUMBER OF REFLECTIONS : 18390 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.236 REMARK 3 R VALUE (WORKING SET) : 0.233 REMARK 3 FREE R VALUE : 0.292 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 938 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.8000 - 5.5100 0.95 2504 119 0.2233 0.2769 REMARK 3 2 5.5100 - 4.3900 0.96 2477 145 0.2040 0.2500 REMARK 3 3 4.3900 - 3.8400 0.96 2522 142 0.1991 0.2924 REMARK 3 4 3.8400 - 3.4900 0.96 2515 140 0.2403 0.2947 REMARK 3 5 3.4900 - 3.2400 0.98 2509 133 0.2631 0.3455 REMARK 3 6 3.2400 - 3.0500 0.97 2554 131 0.3075 0.2981 REMARK 3 7 3.0500 - 2.9000 0.92 2371 128 0.3301 0.4249 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.440 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.880 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3544 REMARK 3 ANGLE : 0.579 4819 REMARK 3 CHIRALITY : 0.156 605 REMARK 3 PLANARITY : 0.004 596 REMARK 3 DIHEDRAL : 10.303 545 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 207 THROUGH 253) OR CHAIN 'B' REMARK 3 ORIGIN FOR THE GROUP (A): -54.9290 -7.4074 24.5407 REMARK 3 T TENSOR REMARK 3 T11: 0.4506 T22: 0.7065 REMARK 3 T33: 0.5396 T12: -0.1011 REMARK 3 T13: -0.0862 T23: 0.1208 REMARK 3 L TENSOR REMARK 3 L11: 3.9099 L22: 3.8146 REMARK 3 L33: 3.3848 L12: -0.5447 REMARK 3 L13: 0.3110 L23: -0.5557 REMARK 3 S TENSOR REMARK 3 S11: -0.3889 S12: -0.3660 S13: 0.0950 REMARK 3 S21: -0.1708 S22: 0.0556 S23: 0.1358 REMARK 3 S31: 0.0615 S32: -0.3788 S33: 0.2695 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 254 THROUGH 299) REMARK 3 ORIGIN FOR THE GROUP (A): -42.8868 8.4237 20.4885 REMARK 3 T TENSOR REMARK 3 T11: 0.4306 T22: 0.4607 REMARK 3 T33: 0.3748 T12: 0.0410 REMARK 3 T13: 0.0477 T23: 0.0135 REMARK 3 L TENSOR REMARK 3 L11: 4.2922 L22: 3.7229 REMARK 3 L33: 3.9913 L12: 2.1980 REMARK 3 L13: -0.1103 L23: 0.5226 REMARK 3 S TENSOR REMARK 3 S11: 0.2215 S12: -0.6535 S13: -0.0253 REMARK 3 S21: 0.1129 S22: -0.0821 S23: 0.5518 REMARK 3 S31: 0.0735 S32: 0.2342 S33: -0.0868 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN 'A' AND (RESID 300 THROUGH 566)) OR CHAIN 'C' REMARK 3 ORIGIN FOR THE GROUP (A): -20.4889 30.3780 12.1388 REMARK 3 T TENSOR REMARK 3 T11: 0.3375 T22: 0.4107 REMARK 3 T33: 0.4505 T12: -0.0077 REMARK 3 T13: 0.0117 T23: -0.0485 REMARK 3 L TENSOR REMARK 3 L11: 0.7429 L22: 1.8006 REMARK 3 L33: 3.1684 L12: -0.2598 REMARK 3 L13: 0.9953 L23: -0.9163 REMARK 3 S TENSOR REMARK 3 S11: -0.0679 S12: 0.0522 S13: 0.2105 REMARK 3 S21: -0.1070 S22: -0.0827 S23: -0.2535 REMARK 3 S31: -0.2022 S32: 0.2201 S33: 0.1364 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8HC0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 11-NOV-22. REMARK 100 THE DEPOSITION ID IS D_1300033257. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL10U2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18390 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 43.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 3.180 REMARK 200 R MERGE (I) : 0.12400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.6800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.07 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.57900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PREDICTED BY ALPHAFOLD2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM SULFATE, 0.1 M SODIUM REMARK 280 ACETATE TRIHYDRATE PH 4.6, 30% PEG-MME 2,000, 15% GLYCEROL, REMARK 280 VAPOR DIFFUSION, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 67.41250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.99650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 67.41250 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 23.99650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR C 580 REMARK 465 HIS C 581 REMARK 465 HIS C 582 REMARK 465 HIS C 583 REMARK 465 HIS C 584 REMARK 465 HIS C 585 REMARK 465 HIS C 586 REMARK 465 ALA C 587 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 240 CG CD CE NZ REMARK 470 LYS A 254 CG CD CE NZ REMARK 470 ARG A 280 CD NE CZ NH1 NH2 REMARK 470 LYS A 438 CG CD CE NZ REMARK 470 LYS A 442 CD CE NZ REMARK 470 ARG A 443 CD NE CZ NH1 NH2 REMARK 470 ARG A 473 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 495 CG CD CE NZ REMARK 470 GLN A 556 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OG1 THR A 388 OE1 GLU A 554 4445 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 223 CB - CG - CD2 ANGL. DEV. = 11.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 262 -61.53 -104.21 REMARK 500 CYS A 275 -167.66 -75.83 REMARK 500 SER A 276 -163.07 -111.61 REMARK 500 GLU A 396 -60.64 -101.65 REMARK 500 ARG A 426 -162.50 -100.45 REMARK 500 LYS A 442 -52.67 -121.14 REMARK 500 PRO A 476 -135.05 -64.30 REMARK 500 GLN A 531 72.62 55.33 REMARK 500 GLU B 196 -58.86 -124.17 REMARK 500 REMARK 500 REMARK: NULL DBREF 8HC0 A 207 566 UNP Q5T601 AGRF1_HUMAN 207 566 DBREF 8HC0 C 567 580 UNP Q5T601 AGRF1_HUMAN 567 580 DBREF 8HC0 B 150 206 UNP Q5T601 AGRF1_HUMAN 150 206 SEQADV 8HC0 HIS C 581 UNP Q5T601 EXPRESSION TAG SEQADV 8HC0 HIS C 582 UNP Q5T601 EXPRESSION TAG SEQADV 8HC0 HIS C 583 UNP Q5T601 EXPRESSION TAG SEQADV 8HC0 HIS C 584 UNP Q5T601 EXPRESSION TAG SEQADV 8HC0 HIS C 585 UNP Q5T601 EXPRESSION TAG SEQADV 8HC0 HIS C 586 UNP Q5T601 EXPRESSION TAG SEQADV 8HC0 ALA C 587 UNP Q5T601 EXPRESSION TAG SEQRES 1 A 360 SER ILE VAL ALA GLY TYR GLU VAL VAL GLY SER SER SER SEQRES 2 A 360 ALA SER GLU LEU LEU SER ALA ILE GLU HIS VAL ALA GLU SEQRES 3 A 360 LYS ALA LYS THR ALA LEU HIS LYS LEU PHE PRO LEU GLU SEQRES 4 A 360 ASP GLY SER PHE ARG VAL PHE GLY LYS ALA GLN CYS ASN SEQRES 5 A 360 ASP ILE VAL PHE GLY PHE GLY SER LYS ASP ASP GLU TYR SEQRES 6 A 360 THR LEU PRO CYS SER SER GLY TYR ARG GLY ASN ILE THR SEQRES 7 A 360 ALA LYS CYS GLU SER SER GLY TRP GLN VAL ILE ARG GLU SEQRES 8 A 360 THR CYS VAL LEU SER LEU LEU GLU GLU LEU ASN LYS ASN SEQRES 9 A 360 PHE SER MET ILE VAL GLY ASN ALA THR GLU ALA ALA VAL SEQRES 10 A 360 SER SER PHE VAL GLN ASN LEU SER VAL ILE ILE ARG GLN SEQRES 11 A 360 ASN PRO SER THR THR VAL GLY ASN LEU ALA SER VAL VAL SEQRES 12 A 360 SER ILE LEU SER ASN ILE SER SER LEU SER LEU ALA SER SEQRES 13 A 360 HIS PHE ARG VAL SER ASN SER THR MET GLU ASP VAL ILE SEQRES 14 A 360 SER ILE ALA ASP ASN ILE LEU ASN SER ALA SER VAL THR SEQRES 15 A 360 ASN TRP THR VAL LEU LEU ARG GLU GLU LYS TYR ALA SER SEQRES 16 A 360 SER ARG LEU LEU GLU THR LEU GLU ASN ILE SER THR LEU SEQRES 17 A 360 VAL PRO PRO THR ALA LEU PRO LEU ASN PHE SER ARG LYS SEQRES 18 A 360 PHE ILE ASP TRP LYS GLY ILE PRO VAL ASN LYS SER GLN SEQRES 19 A 360 LEU LYS ARG GLY TYR SER TYR GLN ILE LYS MET CYS PRO SEQRES 20 A 360 GLN ASN THR SER ILE PRO ILE ARG GLY ARG VAL LEU ILE SEQRES 21 A 360 GLY SER ASP GLN PHE GLN ARG SER LEU PRO GLU THR ILE SEQRES 22 A 360 ILE SER MET ALA SER LEU THR LEU GLY ASN ILE LEU PRO SEQRES 23 A 360 VAL SER LYS ASN GLY ASN ALA GLN VAL ASN GLY PRO VAL SEQRES 24 A 360 ILE SER THR VAL ILE GLN ASN TYR SER ILE ASN GLU VAL SEQRES 25 A 360 PHE LEU PHE PHE SER LYS ILE GLU SER ASN LEU SER GLN SEQRES 26 A 360 PRO HIS CYS VAL PHE TRP ASP PHE SER HIS LEU GLN TRP SEQRES 27 A 360 ASN ASP ALA GLY CYS HIS LEU VAL ASN GLU THR GLN ASP SEQRES 28 A 360 ILE VAL THR CYS GLN CYS THR HIS LEU SEQRES 1 C 21 THR SER PHE SER ILE LEU MET SER PRO PHE VAL PRO SER SEQRES 2 C 21 THR HIS HIS HIS HIS HIS HIS ALA SEQRES 1 B 57 THR LYS ILE TRP GLY THR PHE LYS ILE ASN GLU ARG PHE SEQRES 2 B 57 THR ASN ASP LEU LEU ASN SER SER SER ALA ILE TYR SER SEQRES 3 B 57 LYS TYR ALA ASN GLY ILE GLU ILE GLN LEU LYS LYS ALA SEQRES 4 B 57 TYR GLU ARG ILE GLN GLY PHE GLU SER VAL GLN VAL THR SEQRES 5 B 57 GLN PHE ARG ASN GLY HET NAG D 1 14 HET NAG D 2 14 HET MAN D 3 11 HET MAN D 4 11 HET MAN D 5 11 HET MAN D 6 11 HET NAG A 601 14 HET NAG A 602 14 HET NAG A 603 14 HET NAG A 604 14 HET NAG A 605 14 HET NAG A 606 14 HET NAG B 301 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 4 NAG 9(C8 H15 N O6) FORMUL 4 MAN 4(C6 H12 O6) FORMUL 12 HOH *45(H2 O) HELIX 1 AA1 SER A 219 HIS A 229 1 11 HELIX 2 AA2 VAL A 230 HIS A 239 1 10 HELIX 3 AA3 SER A 302 SER A 312 1 11 HELIX 4 AA4 THR A 319 ASN A 337 1 19 HELIX 5 AA5 THR A 341 HIS A 363 1 23 HELIX 6 AA6 SER A 367 LEU A 382 1 16 HELIX 7 AA7 ASN A 383 ALA A 385 5 3 HELIX 8 AA8 SER A 386 GLU A 397 1 12 HELIX 9 AA9 TYR A 399 THR A 413 1 15 HELIX 10 AB1 LEU A 414 VAL A 415 5 2 HELIX 11 AB2 PRO A 416 LEU A 420 5 5 HELIX 12 AB3 SER A 439 GLY A 444 1 6 HELIX 13 AB4 GLY A 467 GLN A 472 5 6 HELIX 14 AB5 THR A 486 LEU A 491 1 6 HELIX 15 AB6 THR B 163 ASN B 168 5 6 HELIX 16 AB7 SER B 171 GLU B 190 1 20 SHEET 1 AA1 4 ARG A 250 PHE A 252 0 SHEET 2 AA1 4 LYS B 151 ILE B 158 -1 O TRP B 153 N PHE A 252 SHEET 3 AA1 4 ILE A 208 GLY A 216 -1 N ALA A 210 O PHE B 156 SHEET 4 AA1 4 PHE B 195 ARG B 204 -1 O ARG B 204 N VAL A 209 SHEET 1 AA2 2 CYS A 257 ASN A 258 0 SHEET 2 AA2 2 PHE A 264 GLY A 265 -1 O GLY A 265 N CYS A 257 SHEET 1 AA3 3 GLU A 270 PRO A 274 0 SHEET 2 AA3 3 ASN A 282 GLU A 288 -1 O ILE A 283 N LEU A 273 SHEET 3 AA3 3 GLY A 291 GLU A 297 -1 O ARG A 296 N THR A 284 SHEET 1 AA4 2 TYR A 279 ARG A 280 0 SHEET 2 AA4 2 VAL A 300 LEU A 301 -1 O VAL A 300 N ARG A 280 SHEET 1 AA5 6 LEU A 422 SER A 425 0 SHEET 2 AA5 6 ILE A 429 PRO A 435 -1 O TRP A 431 N PHE A 424 SHEET 3 AA5 6 THR A 478 SER A 484 -1 O SER A 481 N LYS A 432 SHEET 4 AA5 6 VAL A 505 ILE A 510 -1 O VAL A 509 N ILE A 480 SHEET 5 AA5 6 SER C 568 PRO C 575 -1 O PHE C 569 N ILE A 506 SHEET 6 AA5 6 GLN A 500 VAL A 501 -1 N GLN A 500 O MET C 573 SHEET 1 AA6 7 LEU A 422 SER A 425 0 SHEET 2 AA6 7 ILE A 429 PRO A 435 -1 O TRP A 431 N PHE A 424 SHEET 3 AA6 7 THR A 478 SER A 484 -1 O SER A 481 N LYS A 432 SHEET 4 AA6 7 VAL A 505 ILE A 510 -1 O VAL A 509 N ILE A 480 SHEET 5 AA6 7 SER C 568 PRO C 575 -1 O PHE C 569 N ILE A 506 SHEET 6 AA6 7 LEU A 529 ASP A 538 -1 N SER A 530 O SER C 574 SHEET 7 AA6 7 GLN A 543 ASN A 545 -1 O ASN A 545 N PHE A 536 SHEET 1 AA7 5 TYR A 445 MET A 451 0 SHEET 2 AA7 5 ILE A 460 ILE A 466 -1 O ILE A 460 N MET A 451 SHEET 3 AA7 5 VAL A 518 SER A 523 -1 O PHE A 519 N LEU A 465 SHEET 4 AA7 5 ILE A 558 CYS A 563 -1 O VAL A 559 N PHE A 522 SHEET 5 AA7 5 CYS A 549 GLU A 554 -1 N ASN A 553 O THR A 560 SSBOND 1 CYS A 257 CYS A 287 1555 1555 2.03 SSBOND 2 CYS A 275 CYS A 299 1555 1555 2.03 SSBOND 3 CYS A 534 CYS A 561 1555 1555 2.03 SSBOND 4 CYS A 549 CYS A 563 1555 1555 2.03 LINK ND2 ASN A 282 C1 NAG A 604 1555 1555 1.44 LINK ND2 ASN A 310 C1 NAG A 605 1555 1555 1.44 LINK ND2 ASN A 329 C1 NAG A 603 1555 1555 1.46 LINK ND2 ASN A 354 C1 NAG A 601 1555 1555 1.45 LINK ND2 ASN A 368 C1 NAG A 602 1555 1555 1.45 LINK ND2 ASN A 389 C1 NAG D 1 1555 1555 1.44 LINK ND2 ASN A 455 C1 NAG A 606 1555 1555 1.44 LINK ND2 ASN B 168 C1 NAG B 301 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.45 LINK O4 NAG D 2 C1 MAN D 3 1555 1555 1.45 LINK O6 MAN D 3 C1 MAN D 4 1555 1555 1.44 LINK O3 MAN D 3 C1 MAN D 6 1555 1555 1.45 LINK O3 MAN D 4 C1 MAN D 5 1555 1555 1.45 CISPEP 1 LEU A 420 PRO A 421 0 3.84 CRYST1 134.825 47.993 87.023 90.00 127.35 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007417 0.000000 0.005660 0.00000 SCALE2 0.000000 0.020836 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014455 0.00000