HEADER VIRAL PROTEIN/IMMUNE SYSTEM 01-NOV-22 8HC5 TITLE SARS-COV-2 WILDTYPE S1 IN COMPLEX WITH YB9-258 FAB AND R1-32 FAB COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPIKE GLYCOPROTEIN; COMPND 3 CHAIN: C; COMPND 4 SYNONYM: S GLYCOPROTEIN,E2,PEPLOMER PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: HEAVY CHAIN OF YB9-258 FAB; COMPND 8 CHAIN: H; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: LIGHT CHAIN OF YB9-258; COMPND 12 CHAIN: L; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 4; COMPND 15 MOLECULE: HEAVY CHAIN OF R1-32 FAB; COMPND 16 CHAIN: D; COMPND 17 ENGINEERED: YES; COMPND 18 MOL_ID: 5; COMPND 19 MOLECULE: LIGHT CHAIN OF R1-32 FAB; COMPND 20 CHAIN: E; COMPND 21 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_TAXID: 2697049; SOURCE 5 GENE: S, 2; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_TAXID: 9606; SOURCE 18 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 20 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 21 MOL_ID: 4; SOURCE 22 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 23 ORGANISM_TAXID: 9606; SOURCE 24 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 25 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 26 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 27 MOL_ID: 5; SOURCE 28 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 29 ORGANISM_TAXID: 9606; SOURCE 30 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 31 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 32 EXPRESSION_SYSTEM_CELL_LINE: HEK293 KEYWDS SPIKE PROTEIN, RBD, ANTIBODY, FAB, VIRAL PROTEIN, VIRAL PROTEIN- KEYWDS 2 IMMUNE SYSTEM COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR B.LIU,X.GAO,Q.CHEN,Z.LI,M.SU,J.HE,X.XIONG REVDAT 2 03-MAY-23 8HC5 1 JRNL REVDAT 1 25-JAN-23 8HC5 0 JRNL AUTH H.YU,B.LIU,Y.ZHANG,X.GAO,Q.WANG,H.XIANG,X.PENG,C.XIE,Y.WANG, JRNL AUTH 2 P.HU,J.SHI,Q.SHI,P.ZHENG,C.FENG,G.TANG,X.LIU,L.GUO,X.LIN, JRNL AUTH 3 J.LI,C.LIU,Y.HUANG,N.YANG,Q.CHEN,Z.LI,M.SU,Q.YAN,R.PEI, JRNL AUTH 4 X.CHEN,L.LIU,F.HU,D.LIANG,B.KE,C.KE,F.LI,J.HE,M.WANG,L.CHEN, JRNL AUTH 5 X.XIONG,X.TANG JRNL TITL SOMATICALLY HYPERMUTATED ANTIBODIES ISOLATED FROM SARS-COV-2 JRNL TITL 2 DELTA INFECTED PATIENTS CROSS-NEUTRALIZE HETEROLOGOUS JRNL TITL 3 VARIANTS. JRNL REF NAT COMMUN V. 14 1058 2023 JRNL REFN ESSN 2041-1723 JRNL PMID 36828833 JRNL DOI 10.1038/S41467-023-36761-0 REMARK 2 REMARK 2 RESOLUTION. 3.43 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.430 REMARK 3 NUMBER OF PARTICLES : 202540 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8HC5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-NOV-22. REMARK 100 THE DEPOSITION ID IS D_1300033259. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : SARS-COV-2 WILDTYPE S1 IN REMARK 245 COMPLEX WITH YB9-258 FAB AND R1- REMARK 245 32 FAB; SARS-COV_2 WILDTYPE S1; REMARK 245 YB9-258 FAB AND R1-32 FAB REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : FEI FALCON IV (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 600.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : OTHER REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, H, L, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET C 1 REMARK 465 PHE C 2 REMARK 465 VAL C 3 REMARK 465 PHE C 4 REMARK 465 LEU C 5 REMARK 465 VAL C 6 REMARK 465 LEU C 7 REMARK 465 LEU C 8 REMARK 465 PRO C 9 REMARK 465 LEU C 10 REMARK 465 VAL C 11 REMARK 465 SER C 12 REMARK 465 SER C 13 REMARK 465 GLN C 14 REMARK 465 CYS C 15 REMARK 465 VAL C 16 REMARK 465 ASN C 17 REMARK 465 LEU C 18 REMARK 465 THR C 19 REMARK 465 THR C 20 REMARK 465 ARG C 21 REMARK 465 THR C 22 REMARK 465 GLN C 23 REMARK 465 LEU C 24 REMARK 465 PRO C 25 REMARK 465 PRO C 26 REMARK 465 ALA C 27 REMARK 465 TYR C 28 REMARK 465 THR C 29 REMARK 465 ASN C 30 REMARK 465 SER C 31 REMARK 465 PHE C 32 REMARK 465 SER C 71 REMARK 465 GLY C 72 REMARK 465 THR C 73 REMARK 465 ASN C 74 REMARK 465 GLY C 75 REMARK 465 THR C 618 REMARK 465 GLU C 619 REMARK 465 VAL C 620 REMARK 465 PRO C 621 REMARK 465 VAL C 622 REMARK 465 ALA C 623 REMARK 465 ILE C 624 REMARK 465 HIS C 625 REMARK 465 ALA C 626 REMARK 465 ASP C 627 REMARK 465 GLN C 628 REMARK 465 LEU C 629 REMARK 465 THR C 630 REMARK 465 PRO C 631 REMARK 465 THR C 632 REMARK 465 LYS H 132 REMARK 465 SER H 133 REMARK 465 THR H 134 REMARK 465 SER H 135 REMARK 465 GLY H 136 REMARK 465 GLY H 137 REMARK 465 GLU D 1 REMARK 465 GLN E 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS D 217 CG CD CE NZ REMARK 470 LYS E 115 CG CD CE NZ REMARK 470 GLU E 188 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL C 159 -54.36 -120.32 REMARK 500 VAL C 213 -63.53 -108.14 REMARK 500 THR C 315 -120.64 55.50 REMARK 500 CYS C 361 -178.51 -171.34 REMARK 500 ASP C 428 35.32 -99.31 REMARK 500 ASN C 481 52.05 -93.29 REMARK 500 PHE C 497 63.10 -100.63 REMARK 500 ASP C 578 72.23 56.43 REMARK 500 VAL H 48 -58.67 -121.04 REMARK 500 ARG H 66 28.37 47.75 REMARK 500 ALA H 91 -169.37 -169.75 REMARK 500 THR L 69 -39.80 -130.60 REMARK 500 ASP L 82 58.54 -97.41 REMARK 500 ALA L 112 -139.66 57.70 REMARK 500 SER D 30 -127.82 59.36 REMARK 500 ASN E 53 -4.57 67.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-34652 RELATED DB: EMDB REMARK 900 SARS-COV-2 WILDTYPE S1 IN COMPLEX WITH YB9-258 FAB AND R1-32 FAB DBREF 8HC5 C 1 676 UNP P0DTC2 SPIKE_SARS2 1 676 DBREF 8HC5 H 1 220 PDB 8HC5 8HC5 1 220 DBREF 8HC5 L 1 215 PDB 8HC5 8HC5 1 215 DBREF 8HC5 D 1 228 PDB 8HC5 8HC5 1 228 DBREF 8HC5 E 1 214 PDB 8HC5 8HC5 1 214 SEQRES 1 C 676 MET PHE VAL PHE LEU VAL LEU LEU PRO LEU VAL SER SER SEQRES 2 C 676 GLN CYS VAL ASN LEU THR THR ARG THR GLN LEU PRO PRO SEQRES 3 C 676 ALA TYR THR ASN SER PHE THR ARG GLY VAL TYR TYR PRO SEQRES 4 C 676 ASP LYS VAL PHE ARG SER SER VAL LEU HIS SER THR GLN SEQRES 5 C 676 ASP LEU PHE LEU PRO PHE PHE SER ASN VAL THR TRP PHE SEQRES 6 C 676 HIS ALA ILE HIS VAL SER GLY THR ASN GLY THR LYS ARG SEQRES 7 C 676 PHE ASP ASN PRO VAL LEU PRO PHE ASN ASP GLY VAL TYR SEQRES 8 C 676 PHE ALA SER THR GLU LYS SER ASN ILE ILE ARG GLY TRP SEQRES 9 C 676 ILE PHE GLY THR THR LEU ASP SER LYS THR GLN SER LEU SEQRES 10 C 676 LEU ILE VAL ASN ASN ALA THR ASN VAL VAL ILE LYS VAL SEQRES 11 C 676 CYS GLU PHE GLN PHE CYS ASN ASP PRO PHE LEU GLY VAL SEQRES 12 C 676 TYR TYR HIS LYS ASN ASN LYS SER TRP MET GLU SER GLU SEQRES 13 C 676 PHE ARG VAL TYR SER SER ALA ASN ASN CYS THR PHE GLU SEQRES 14 C 676 TYR VAL SER GLN PRO PHE LEU MET ASP LEU GLU GLY LYS SEQRES 15 C 676 GLN GLY ASN PHE LYS ASN LEU ARG GLU PHE VAL PHE LYS SEQRES 16 C 676 ASN ILE ASP GLY TYR PHE LYS ILE TYR SER LYS HIS THR SEQRES 17 C 676 PRO ILE ASN LEU VAL ARG ASP LEU PRO GLN GLY PHE SER SEQRES 18 C 676 ALA LEU GLU PRO LEU VAL ASP LEU PRO ILE GLY ILE ASN SEQRES 19 C 676 ILE THR ARG PHE GLN THR LEU LEU ALA LEU HIS ARG SER SEQRES 20 C 676 TYR LEU THR PRO GLY ASP SER SER SER GLY TRP THR ALA SEQRES 21 C 676 GLY ALA ALA ALA TYR TYR VAL GLY TYR LEU GLN PRO ARG SEQRES 22 C 676 THR PHE LEU LEU LYS TYR ASN GLU ASN GLY THR ILE THR SEQRES 23 C 676 ASP ALA VAL ASP CYS ALA LEU ASP PRO LEU SER GLU THR SEQRES 24 C 676 LYS CYS THR LEU LYS SER PHE THR VAL GLU LYS GLY ILE SEQRES 25 C 676 TYR GLN THR SER ASN PHE ARG VAL GLN PRO THR GLU SER SEQRES 26 C 676 ILE VAL ARG PHE PRO ASN ILE THR ASN LEU CYS PRO PHE SEQRES 27 C 676 GLY GLU VAL PHE ASN ALA THR ARG PHE ALA SER VAL TYR SEQRES 28 C 676 ALA TRP ASN ARG LYS ARG ILE SER ASN CYS VAL ALA ASP SEQRES 29 C 676 TYR SER VAL LEU TYR ASN SER ALA SER PHE SER THR PHE SEQRES 30 C 676 LYS CYS TYR GLY VAL SER PRO THR LYS LEU ASN ASP LEU SEQRES 31 C 676 CYS PHE THR ASN VAL TYR ALA ASP SER PHE VAL ILE ARG SEQRES 32 C 676 GLY ASP GLU VAL ARG GLN ILE ALA PRO GLY GLN THR GLY SEQRES 33 C 676 LYS ILE ALA ASP TYR ASN TYR LYS LEU PRO ASP ASP PHE SEQRES 34 C 676 THR GLY CYS VAL ILE ALA TRP ASN SER ASN ASN LEU ASP SEQRES 35 C 676 SER LYS VAL GLY GLY ASN TYR ASN TYR LEU TYR ARG LEU SEQRES 36 C 676 PHE ARG LYS SER ASN LEU LYS PRO PHE GLU ARG ASP ILE SEQRES 37 C 676 SER THR GLU ILE TYR GLN ALA GLY SER THR PRO CYS ASN SEQRES 38 C 676 GLY VAL GLU GLY PHE ASN CYS TYR PHE PRO LEU GLN SER SEQRES 39 C 676 TYR GLY PHE GLN PRO THR ASN GLY VAL GLY TYR GLN PRO SEQRES 40 C 676 TYR ARG VAL VAL VAL LEU SER PHE GLU LEU LEU HIS ALA SEQRES 41 C 676 PRO ALA THR VAL CYS GLY PRO LYS LYS SER THR ASN LEU SEQRES 42 C 676 VAL LYS ASN LYS CYS VAL ASN PHE ASN PHE ASN GLY LEU SEQRES 43 C 676 THR GLY THR GLY VAL LEU THR GLU SER ASN LYS LYS PHE SEQRES 44 C 676 LEU PRO PHE GLN GLN PHE GLY ARG ASP ILE ALA ASP THR SEQRES 45 C 676 THR ASP ALA VAL ARG ASP PRO GLN THR LEU GLU ILE LEU SEQRES 46 C 676 ASP ILE THR PRO CYS SER PHE GLY GLY VAL SER VAL ILE SEQRES 47 C 676 THR PRO GLY THR ASN THR SER ASN GLN VAL ALA VAL LEU SEQRES 48 C 676 TYR GLN ASP VAL ASN CYS THR GLU VAL PRO VAL ALA ILE SEQRES 49 C 676 HIS ALA ASP GLN LEU THR PRO THR TRP ARG VAL TYR SER SEQRES 50 C 676 THR GLY SER ASN VAL PHE GLN THR ARG ALA GLY CYS LEU SEQRES 51 C 676 ILE GLY ALA GLU HIS VAL ASN ASN SER TYR GLU CYS ASP SEQRES 52 C 676 ILE PRO ILE GLY ALA GLY ILE CYS ALA SER TYR GLN THR SEQRES 1 H 220 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU ILE GLN SEQRES 2 H 220 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 220 LEU THR VAL SER SER ASN TYR MET HIS TRP VAL ARG GLN SEQRES 4 H 220 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER VAL LEU TYR SEQRES 5 H 220 ALA GLY GLY SER ALA PHE TYR ALA ASP SER VAL LYS GLY SEQRES 6 H 220 ARG PHE THR ILE SER ARG ASN ASN SER LYS ASN THR LEU SEQRES 7 H 220 TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR ALA SEQRES 8 H 220 ILE TYR TYR CYS ALA ARG GLY LEU GLY ASP TYR LEU ASP SEQRES 9 H 220 SER TRP GLY GLN GLY THR LEU VAL THR VAL SER SER ALA SEQRES 10 H 220 SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SEQRES 11 H 220 SER LYS SER THR SER GLY GLY THR ALA ALA LEU GLY CYS SEQRES 12 H 220 LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER SEQRES 13 H 220 TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR PHE SEQRES 14 H 220 PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SEQRES 15 H 220 SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR GLN SEQRES 16 H 220 THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR SEQRES 17 H 220 LYS VAL ASP LYS LYS VAL GLU PRO LYS SER CYS ASP SEQRES 1 L 215 ASP ILE GLN MET THR GLN SER PRO SER SER VAL SER ALA SEQRES 2 L 215 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 L 215 GLN GLY ILE GLY SER TRP LEU ALA TRP TYR GLN GLN LYS SEQRES 4 L 215 PRO GLY LYS ALA PRO GLN LEU LEU ILE TYR ALA ALA SER SEQRES 5 L 215 THR LEU GLN SER GLY VAL PRO PRO ARG PHE SER GLY SER SEQRES 6 L 215 GLY SER GLY THR ASP PHE THR LEU THR ILE THR SER LEU SEQRES 7 L 215 GLN PRO GLU ASP PHE ALA SER TYR TYR CYS GLN GLN ALA SEQRES 8 L 215 ASN SER VAL LEU ALA LEU THR PHE GLY GLY GLY THR LYS SEQRES 9 L 215 VAL GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE SEQRES 10 L 215 ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR SEQRES 11 L 215 ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG SEQRES 12 L 215 GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SEQRES 13 L 215 SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER SEQRES 14 L 215 LYS ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SEQRES 15 L 215 SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS SEQRES 16 L 215 GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SEQRES 17 L 215 SER PHE ASN ARG GLY GLU CYS SEQRES 1 D 228 GLU VAL GLN LEU VAL GLU SER GLY ALA GLU VAL LYS LYS SEQRES 2 D 228 PRO GLY SER SER VAL LYS VAL SER CYS LYS ALA SER GLY SEQRES 3 D 228 GLY THR PHE SER SER TYR ALA ILE SER TRP VAL ARG GLN SEQRES 4 D 228 ALA PRO GLY GLN GLY LEU GLU TRP MET GLY GLY ILE ILE SEQRES 5 D 228 PRO ILE LEU GLY ILE ALA ASN TYR ALA GLN LYS PHE GLN SEQRES 6 D 228 GLY ARG VAL THR ILE THR ALA ASP LYS SER THR SER THR SEQRES 7 D 228 ALA TYR MET GLU LEU SER SER LEU ARG SER GLU ASP THR SEQRES 8 D 228 ALA VAL TYR TYR CYS ALA ARG GLU ASN GLY TYR SER GLY SEQRES 9 D 228 TYR GLY ALA ALA ALA ASN PHE ASP LEU TRP GLY ARG GLY SEQRES 10 D 228 THR LEU VAL THR VAL SER SER ALA SER THR LYS GLY PRO SEQRES 11 D 228 SER VAL PHE PRO LEU ALA PRO SER SER LYS SER THR SER SEQRES 12 D 228 GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR SEQRES 13 D 228 PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY ALA SEQRES 14 D 228 LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SEQRES 15 D 228 SER SER GLY LEU TYR SER LEU SER SER VAL VAL THR VAL SEQRES 16 D 228 PRO SER SER SER LEU GLY THR GLN THR TYR ILE CYS ASN SEQRES 17 D 228 VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS LYS SEQRES 18 D 228 VAL GLU PRO LYS SER CYS ASP SEQRES 1 E 214 GLN SER VAL LEU THR GLN PRO PRO SER VAL SER GLY ALA SEQRES 2 E 214 PRO GLY GLN ARG VAL THR ILE SER CYS THR GLY SER SER SEQRES 3 E 214 SER ASN ILE GLY ALA GLY TYR ASP VAL HIS TRP TYR GLN SEQRES 4 E 214 GLN LEU PRO GLY THR ALA PRO LYS LEU LEU ILE TYR GLY SEQRES 5 E 214 ASN SER ASN ARG PRO SER GLY VAL PRO ASP ARG PHE SER SEQRES 6 E 214 GLY SER LYS SER GLY THR SER ALA SER LEU ALA ILE THR SEQRES 7 E 214 GLY LEU GLN ALA GLU ASP GLU ALA ASP TYR TYR CYS GLN SEQRES 8 E 214 SER TYR ASP SER SER LEU SER GLY SER VAL PHE GLY GLY SEQRES 9 E 214 GLY THR LYS LEU THR VAL LEU GLY GLN PRO LYS ALA ALA SEQRES 10 E 214 PRO SER VAL THR LEU PHE PRO PRO SER SER GLU GLU LEU SEQRES 11 E 214 GLN ALA ASN LYS ALA THR LEU VAL CYS LEU ILE SER ASP SEQRES 12 E 214 PHE TYR PRO GLY ALA VAL THR VAL ALA TRP LYS ALA ASP SEQRES 13 E 214 SER SER PRO VAL LYS ALA GLY VAL GLU THR THR THR PRO SEQRES 14 E 214 SER LYS GLN SER ASN ASN LYS TYR ALA ALA SER SER TYR SEQRES 15 E 214 LEU SER LEU THR PRO GLU GLN TRP LYS SER HIS ARG SER SEQRES 16 E 214 TYR SER CYS GLN VAL THR HIS GLU GLY SER THR VAL GLU SEQRES 17 E 214 LYS THR VAL ALA PRO THR HET NAG C 701 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 6 NAG C8 H15 N O6 HELIX 1 AA1 ASP C 294 LYS C 304 1 11 HELIX 2 AA2 PRO C 337 ASN C 343 1 7 HELIX 3 AA3 TYR C 365 ASN C 370 1 6 HELIX 4 AA4 GLY C 404 ARG C 408 1 5 HELIX 5 AA5 GLN C 409 ALA C 411 5 3 HELIX 6 AA6 ARG H 86 THR H 90 5 5 HELIX 7 AA7 SER H 159 ALA H 161 5 3 HELIX 8 AA8 PRO H 188 LEU H 192 5 5 HELIX 9 AA9 SER L 122 LYS L 127 5 6 HELIX 10 AB1 LYS L 184 GLU L 188 1 5 HELIX 11 AB2 SER D 198 LEU D 200 5 3 HELIX 12 AB3 GLN E 81 GLU E 85 5 5 HELIX 13 AB4 SER E 126 ASN E 133 5 8 SHEET 1 AA1 3 VAL C 47 PHE C 55 0 SHEET 2 AA1 3 GLN C 271 TYR C 279 -1 O GLN C 271 N PHE C 55 SHEET 3 AA1 3 ILE C 285 ASP C 290 -1 O VAL C 289 N LEU C 276 SHEET 1 AA2 6 THR C 63 ALA C 67 0 SHEET 2 AA2 6 ALA C 263 TYR C 269 -1 O ALA C 263 N ALA C 67 SHEET 3 AA2 6 VAL C 90 GLU C 96 -1 N TYR C 91 O GLY C 268 SHEET 4 AA2 6 PHE C 186 ILE C 197 -1 O PHE C 192 N PHE C 92 SHEET 5 AA2 6 TYR C 200 LEU C 212 -1 O ILE C 210 N LYS C 187 SHEET 6 AA2 6 GLU C 224 LEU C 229 -1 O LEU C 229 N PHE C 201 SHEET 1 AA3 6 VAL C 83 PRO C 85 0 SHEET 2 AA3 6 ARG C 237 LEU C 241 -1 O PHE C 238 N LEU C 84 SHEET 3 AA3 6 GLY C 103 GLY C 107 -1 N GLY C 107 O ARG C 237 SHEET 4 AA3 6 SER C 116 ASN C 121 -1 O LEU C 117 N PHE C 106 SHEET 5 AA3 6 VAL C 126 TYR C 145 -1 O LYS C 129 N LEU C 118 SHEET 6 AA3 6 TRP C 152 VAL C 171 -1 O TYR C 170 N ILE C 128 SHEET 1 AA4 6 VAL C 83 PRO C 85 0 SHEET 2 AA4 6 ARG C 237 LEU C 241 -1 O PHE C 238 N LEU C 84 SHEET 3 AA4 6 GLY C 103 GLY C 107 -1 N GLY C 107 O ARG C 237 SHEET 4 AA4 6 SER C 116 ASN C 121 -1 O LEU C 117 N PHE C 106 SHEET 5 AA4 6 VAL C 126 TYR C 145 -1 O LYS C 129 N LEU C 118 SHEET 6 AA4 6 ALA C 243 ARG C 246 1 O LEU C 244 N LEU C 141 SHEET 1 AA5 5 ILE C 312 TYR C 313 0 SHEET 2 AA5 5 VAL C 595 ILE C 598 -1 O VAL C 597 N TYR C 313 SHEET 3 AA5 5 ALA C 609 TYR C 612 -1 O ALA C 609 N ILE C 598 SHEET 4 AA5 5 CYS C 649 ILE C 651 -1 O CYS C 649 N TYR C 612 SHEET 5 AA5 5 PHE C 643 GLN C 644 -1 N PHE C 643 O LEU C 650 SHEET 1 AA6 5 ASN C 354 ILE C 358 0 SHEET 2 AA6 5 ASN C 394 ARG C 403 -1 O ALA C 397 N LYS C 356 SHEET 3 AA6 5 PRO C 507 GLU C 516 -1 O VAL C 512 N ASP C 398 SHEET 4 AA6 5 GLY C 431 ASN C 437 -1 N ILE C 434 O VAL C 511 SHEET 5 AA6 5 PHE C 374 THR C 376 -1 N SER C 375 O ALA C 435 SHEET 1 AA7 2 CYS C 361 VAL C 362 0 SHEET 2 AA7 2 VAL C 524 CYS C 525 1 O CYS C 525 N CYS C 361 SHEET 1 AA8 2 LEU C 452 ARG C 454 0 SHEET 2 AA8 2 LEU C 492 SER C 494 -1 O GLN C 493 N TYR C 453 SHEET 1 AA9 2 ARG C 466 ILE C 468 0 SHEET 2 AA9 2 TYR D 102 GLY D 104 -1 O TYR D 102 N ILE C 468 SHEET 1 AB1 2 TYR C 473 GLN C 474 0 SHEET 2 AB1 2 CYS C 488 TYR C 489 -1 O TYR C 489 N TYR C 473 SHEET 1 AB2 3 CYS C 538 PHE C 543 0 SHEET 2 AB2 3 LEU C 546 GLU C 554 -1 O GLY C 550 N VAL C 539 SHEET 3 AB2 3 LEU C 585 THR C 588 -1 O THR C 588 N VAL C 551 SHEET 1 AB3 2 ILE C 664 GLY C 667 0 SHEET 2 AB3 2 ILE C 670 ALA C 672 -1 O ILE C 670 N ILE C 666 SHEET 1 AB4 4 GLN H 3 SER H 7 0 SHEET 2 AB4 4 LEU H 18 SER H 25 -1 O ALA H 23 N VAL H 5 SHEET 3 AB4 4 THR H 77 MET H 82 -1 O LEU H 78 N CYS H 22 SHEET 4 AB4 4 THR H 68 ILE H 69 -1 N THR H 68 O GLN H 81 SHEET 1 AB5 6 LEU H 11 ILE H 12 0 SHEET 2 AB5 6 THR H 110 VAL H 114 1 O THR H 113 N ILE H 12 SHEET 3 AB5 6 ALA H 91 GLY H 98 -1 N ALA H 91 O VAL H 112 SHEET 4 AB5 6 TYR H 33 GLN H 39 -1 N HIS H 35 O ALA H 96 SHEET 5 AB5 6 LEU H 45 LEU H 51 -1 O LEU H 51 N MET H 34 SHEET 6 AB5 6 ALA H 57 TYR H 59 -1 O PHE H 58 N VAL H 50 SHEET 1 AB6 4 LEU H 11 ILE H 12 0 SHEET 2 AB6 4 THR H 110 VAL H 114 1 O THR H 113 N ILE H 12 SHEET 3 AB6 4 ALA H 91 GLY H 98 -1 N ALA H 91 O VAL H 112 SHEET 4 AB6 4 LEU H 103 SER H 105 -1 O ASP H 104 N ARG H 97 SHEET 1 AB7 4 SER H 123 LEU H 127 0 SHEET 2 AB7 4 ALA H 139 TYR H 148 -1 O LEU H 144 N PHE H 125 SHEET 3 AB7 4 TYR H 179 VAL H 187 -1 O VAL H 187 N ALA H 139 SHEET 4 AB7 4 VAL H 166 THR H 168 -1 N HIS H 167 O VAL H 184 SHEET 1 AB8 4 SER H 123 LEU H 127 0 SHEET 2 AB8 4 ALA H 139 TYR H 148 -1 O LEU H 144 N PHE H 125 SHEET 3 AB8 4 TYR H 179 VAL H 187 -1 O VAL H 187 N ALA H 139 SHEET 4 AB8 4 VAL H 172 LEU H 173 -1 N VAL H 172 O SER H 180 SHEET 1 AB9 3 THR H 154 TRP H 157 0 SHEET 2 AB9 3 ILE H 198 ASN H 202 -1 O ASN H 200 N SER H 156 SHEET 3 AB9 3 LYS H 209 LYS H 213 -1 O VAL H 210 N VAL H 201 SHEET 1 AC1 3 THR L 5 GLN L 6 0 SHEET 2 AC1 3 THR L 22 ARG L 24 -1 O ARG L 24 N THR L 5 SHEET 3 AC1 3 PHE L 71 THR L 72 -1 O PHE L 71 N CYS L 23 SHEET 1 AC2 5 SER L 10 SER L 12 0 SHEET 2 AC2 5 THR L 103 GLU L 106 1 O LYS L 104 N VAL L 11 SHEET 3 AC2 5 SER L 85 ALA L 91 -1 N TYR L 86 O THR L 103 SHEET 4 AC2 5 ALA L 34 GLN L 38 -1 N ALA L 34 O GLN L 89 SHEET 5 AC2 5 PRO L 44 ILE L 48 -1 O LEU L 47 N TRP L 35 SHEET 1 AC3 4 SER L 10 SER L 12 0 SHEET 2 AC3 4 THR L 103 GLU L 106 1 O LYS L 104 N VAL L 11 SHEET 3 AC3 4 SER L 85 ALA L 91 -1 N TYR L 86 O THR L 103 SHEET 4 AC3 4 LEU L 97 PHE L 99 -1 O THR L 98 N GLN L 90 SHEET 1 AC4 4 ALA L 112 PHE L 119 0 SHEET 2 AC4 4 THR L 130 PHE L 140 -1 O LEU L 136 N PHE L 117 SHEET 3 AC4 4 TYR L 174 SER L 183 -1 O LEU L 176 N LEU L 137 SHEET 4 AC4 4 SER L 160 VAL L 164 -1 N SER L 163 O SER L 177 SHEET 1 AC5 4 ALA L 154 LEU L 155 0 SHEET 2 AC5 4 TRP L 149 VAL L 151 -1 N VAL L 151 O ALA L 154 SHEET 3 AC5 4 VAL L 192 VAL L 197 -1 O ALA L 194 N LYS L 150 SHEET 4 AC5 4 VAL L 206 ASN L 211 -1 O PHE L 210 N TYR L 193 SHEET 1 AC6 4 GLN D 3 GLU D 6 0 SHEET 2 AC6 4 SER D 21 SER D 25 -1 O LYS D 23 N VAL D 5 SHEET 3 AC6 4 THR D 78 TYR D 80 -1 O ALA D 79 N CYS D 22 SHEET 4 AC6 4 ALA D 72 ASP D 73 -1 N ASP D 73 O THR D 78 SHEET 1 AC7 6 GLU D 10 LYS D 12 0 SHEET 2 AC7 6 THR D 118 VAL D 122 1 O THR D 121 N LYS D 12 SHEET 3 AC7 6 VAL D 93 ASN D 100 -1 N TYR D 94 O THR D 118 SHEET 4 AC7 6 ILE D 34 GLN D 39 -1 N SER D 35 O ALA D 97 SHEET 5 AC7 6 LEU D 45 ILE D 51 -1 O ILE D 51 N ILE D 34 SHEET 6 AC7 6 ALA D 58 TYR D 60 -1 O ASN D 59 N GLY D 50 SHEET 1 AC8 4 GLU D 10 LYS D 12 0 SHEET 2 AC8 4 THR D 118 VAL D 122 1 O THR D 121 N LYS D 12 SHEET 3 AC8 4 VAL D 93 ASN D 100 -1 N TYR D 94 O THR D 118 SHEET 4 AC8 4 ASN D 110 LEU D 113 -1 O LEU D 113 N ARG D 98 SHEET 1 AC9 2 VAL D 68 THR D 69 0 SHEET 2 AC9 2 GLU D 82 LEU D 83 -1 O GLU D 82 N THR D 69 SHEET 1 AD1 3 SER D 131 LEU D 135 0 SHEET 2 AD1 3 THR D 146 LYS D 154 -1 O GLY D 150 N LEU D 135 SHEET 3 AD1 3 VAL D 193 PRO D 196 -1 O VAL D 195 N ALA D 147 SHEET 1 AD2 3 VAL D 163 TRP D 165 0 SHEET 2 AD2 3 TYR D 205 HIS D 211 -1 O ASN D 208 N SER D 164 SHEET 3 AD2 3 THR D 216 VAL D 222 -1 O THR D 216 N HIS D 211 SHEET 1 AD3 5 VAL E 10 SER E 11 0 SHEET 2 AD3 5 THR E 106 THR E 109 1 O LYS E 107 N VAL E 10 SHEET 3 AD3 5 ASP E 87 ASP E 94 -1 N TYR E 88 O THR E 106 SHEET 4 AD3 5 HIS E 36 GLN E 40 -1 N GLN E 40 O ASP E 87 SHEET 5 AD3 5 LYS E 47 TYR E 51 -1 O LEU E 49 N TRP E 37 SHEET 1 AD4 4 VAL E 10 SER E 11 0 SHEET 2 AD4 4 THR E 106 THR E 109 1 O LYS E 107 N VAL E 10 SHEET 3 AD4 4 ASP E 87 ASP E 94 -1 N TYR E 88 O THR E 106 SHEET 4 AD4 4 GLY E 99 VAL E 101 -1 O VAL E 101 N SER E 92 SHEET 1 AD5 3 ARG E 17 CYS E 22 0 SHEET 2 AD5 3 ALA E 73 THR E 78 -1 O ALA E 73 N CYS E 22 SHEET 3 AD5 3 PHE E 64 LYS E 68 -1 N SER E 65 O ALA E 76 SHEET 1 AD6 4 SER E 119 PHE E 123 0 SHEET 2 AD6 4 ALA E 135 PHE E 144 -1 O LEU E 140 N THR E 121 SHEET 3 AD6 4 TYR E 177 LEU E 185 -1 O LEU E 185 N ALA E 135 SHEET 4 AD6 4 SER E 170 LYS E 171 -1 N SER E 170 O ALA E 178 SHEET 1 AD7 3 THR E 150 LYS E 154 0 SHEET 2 AD7 3 TYR E 196 HIS E 202 -1 O GLN E 199 N ALA E 152 SHEET 3 AD7 3 SER E 205 VAL E 211 -1 O SER E 205 N HIS E 202 SSBOND 1 CYS C 131 CYS C 166 1555 1555 2.03 SSBOND 2 CYS C 291 CYS C 301 1555 1555 2.03 SSBOND 3 CYS C 336 CYS C 361 1555 1555 2.03 SSBOND 4 CYS C 379 CYS C 432 1555 1555 2.04 SSBOND 5 CYS C 391 CYS C 525 1555 1555 2.04 SSBOND 6 CYS C 480 CYS C 488 1555 1555 2.03 SSBOND 7 CYS C 538 CYS C 590 1555 1555 2.03 SSBOND 8 CYS C 617 CYS C 649 1555 1555 2.03 SSBOND 9 CYS C 662 CYS C 671 1555 1555 2.03 SSBOND 10 CYS H 22 CYS H 95 1555 1555 2.03 SSBOND 11 CYS H 143 CYS H 199 1555 1555 2.03 SSBOND 12 CYS H 219 CYS L 215 1555 1555 2.03 SSBOND 13 CYS L 23 CYS L 88 1555 1555 2.03 SSBOND 14 CYS L 135 CYS L 195 1555 1555 2.03 SSBOND 15 CYS D 22 CYS D 96 1555 1555 2.03 SSBOND 16 CYS D 151 CYS D 207 1555 1555 2.03 SSBOND 17 CYS E 22 CYS E 90 1555 1555 2.03 SSBOND 18 CYS E 139 CYS E 198 1555 1555 2.03 LINK ND2 ASN C 343 C1 NAG C 701 1555 1555 1.44 CISPEP 1 PHE H 149 PRO H 150 0 -2.26 CISPEP 2 GLU H 151 PRO H 152 0 -3.57 CISPEP 3 TYR L 141 PRO L 142 0 -1.51 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000