data_8HC7 # _entry.id 8HC7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.368 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8HC7 pdb_00008hc7 10.2210/pdb8hc7/pdb WWPDB D_1300033244 ? ? EMDB EMD-34654 ? ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'SARS-CoV-2 Omicron BA.1 spike trimer with in complex with YB9-258 Fab, focused refinement of 2 RBD region' _pdbx_database_related.db_id EMD-34654 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8HC7 _pdbx_database_status.recvd_initial_deposition_date 2022-11-01 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Liu, B.' 1 ? 'Gao, X.' 2 0000-0002-0602-4690 'Chen, Q.' 3 ? 'Li, Z.' 4 ? 'Su, M.' 5 ? 'He, J.' 6 0000-0003-0270-9729 'Xiong, X.' 7 0000-0002-4632-9122 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 14 _citation.language ? _citation.page_first 1058 _citation.page_last 1058 _citation.title 'Somatically hypermutated antibodies isolated from SARS-CoV-2 Delta infected patients cross-neutralize heterologous variants.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-023-36761-0 _citation.pdbx_database_id_PubMed 36828833 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yu, H.' 1 0000-0002-1757-1411 primary 'Liu, B.' 2 ? primary 'Zhang, Y.' 3 ? primary 'Gao, X.' 4 0000-0002-0602-4690 primary 'Wang, Q.' 5 ? primary 'Xiang, H.' 6 ? primary 'Peng, X.' 7 ? primary 'Xie, C.' 8 ? primary 'Wang, Y.' 9 ? primary 'Hu, P.' 10 ? primary 'Shi, J.' 11 0000-0003-3019-3272 primary 'Shi, Q.' 12 ? primary 'Zheng, P.' 13 ? primary 'Feng, C.' 14 ? primary 'Tang, G.' 15 ? primary 'Liu, X.' 16 ? primary 'Guo, L.' 17 ? primary 'Lin, X.' 18 ? primary 'Li, J.' 19 ? primary 'Liu, C.' 20 0000-0003-2258-0897 primary 'Huang, Y.' 21 ? primary 'Yang, N.' 22 ? primary 'Chen, Q.' 23 ? primary 'Li, Z.' 24 ? primary 'Su, M.' 25 ? primary 'Yan, Q.' 26 ? primary 'Pei, R.' 27 ? primary 'Chen, X.' 28 0000-0002-4052-8155 primary 'Liu, L.' 29 0000-0002-5828-5542 primary 'Hu, F.' 30 ? primary 'Liang, D.' 31 ? primary 'Ke, B.' 32 ? primary 'Ke, C.' 33 ? primary 'Li, F.' 34 0000-0003-3169-6349 primary 'He, J.' 35 0000-0003-0270-9729 primary 'Wang, M.' 36 0000-0003-4249-6254 primary 'Chen, L.' 37 0000-0003-1485-1626 primary 'Xiong, X.' 38 0000-0002-4632-9122 primary 'Tang, X.' 39 0000-0002-5067-659X # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8HC7 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8HC7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Spike protein S1' 58054.379 1 ? ? ? ? 2 polymer man 'Spike protein S1' 30244.215 1 ? ? ? ? 3 polymer man 'Heavy chain variable region of YB9-258' 12356.818 1 ? ? ? ? 4 polymer man 'Light chain variable region of YB9-258' 11288.553 1 ? ? ? ? 5 non-polymer syn 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 7 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHVISGTNGTKRFDNPVLPFNDGVYFASI EKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLDHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMD LEGKQGNFKNLREFVFKNIDGYFKIYSKHTPIIVREPEDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSS GWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLC PFDEVFNATRFASVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTG NIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNCYFPLRSYS FRPTYGVGHQPYRVVVLSFELLHAPATVCG ; ;QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHVISGTNGTKRFDNPVLPFNDGVYFASI EKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLDHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMD LEGKQGNFKNLREFVFKNIDGYFKIYSKHTPIIVREPEDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSS GWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLC PFDEVFNATRFASVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTG NIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNCYFPLRSYS FRPTYGVGHQPYRVVVLSFELLHAPATVCG ; C ? 2 'polypeptide(L)' no no ;PTESIVRFPNITNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCFTNVYADSFV IRGDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCN GVAGFNCYFPLRSYSFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLKGTGVLTESNKKFLP FQQFGRDIADTTDAVRDPQTLEILDIT ; ;PTESIVRFPNITNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCFTNVYADSFV IRGDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCN GVAGFNCYFPLRSYSFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLKGTGVLTESNKKFLP FQQFGRDIADTTDAVRDPQTLEILDIT ; A ? 3 'polypeptide(L)' no no ;EVQLVESGGGLIQPGGSLRLSCAASGLTVSSNYMHWVRQAPGKGLEWVSVLYAGGSAFYADSVKGRFTISRNNSKNTLYL QMNSLRAEDTAIYYCARGLGDYLDSWGQGTLVTVS ; ;EVQLVESGGGLIQPGGSLRLSCAASGLTVSSNYMHWVRQAPGKGLEWVSVLYAGGSAFYADSVKGRFTISRNNSKNTLYL QMNSLRAEDTAIYYCARGLGDYLDSWGQGTLVTVS ; H ? 4 'polypeptide(L)' no no ;DIQMTQSPSSVSASVGDRVTITCRASQGIGSWLAWYQQKPGKAPQLLIYAASTLQSGVPPRFSGSGSGTDFTLTITSLQP EDFASYYCQQANSVLALTFGGGTKVEI ; ;DIQMTQSPSSVSASVGDRVTITCRASQGIGSWLAWYQQKPGKAPQLLIYAASTLQSGVPPRFSGSGSGTDFTLTITSLQP EDFASYYCQQANSVLALTFGGGTKVEI ; L ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 CYS n 1 3 VAL n 1 4 ASN n 1 5 LEU n 1 6 THR n 1 7 THR n 1 8 ARG n 1 9 THR n 1 10 GLN n 1 11 LEU n 1 12 PRO n 1 13 PRO n 1 14 ALA n 1 15 TYR n 1 16 THR n 1 17 ASN n 1 18 SER n 1 19 PHE n 1 20 THR n 1 21 ARG n 1 22 GLY n 1 23 VAL n 1 24 TYR n 1 25 TYR n 1 26 PRO n 1 27 ASP n 1 28 LYS n 1 29 VAL n 1 30 PHE n 1 31 ARG n 1 32 SER n 1 33 SER n 1 34 VAL n 1 35 LEU n 1 36 HIS n 1 37 SER n 1 38 THR n 1 39 GLN n 1 40 ASP n 1 41 LEU n 1 42 PHE n 1 43 LEU n 1 44 PRO n 1 45 PHE n 1 46 PHE n 1 47 SER n 1 48 ASN n 1 49 VAL n 1 50 THR n 1 51 TRP n 1 52 PHE n 1 53 HIS n 1 54 VAL n 1 55 ILE n 1 56 SER n 1 57 GLY n 1 58 THR n 1 59 ASN n 1 60 GLY n 1 61 THR n 1 62 LYS n 1 63 ARG n 1 64 PHE n 1 65 ASP n 1 66 ASN n 1 67 PRO n 1 68 VAL n 1 69 LEU n 1 70 PRO n 1 71 PHE n 1 72 ASN n 1 73 ASP n 1 74 GLY n 1 75 VAL n 1 76 TYR n 1 77 PHE n 1 78 ALA n 1 79 SER n 1 80 ILE n 1 81 GLU n 1 82 LYS n 1 83 SER n 1 84 ASN n 1 85 ILE n 1 86 ILE n 1 87 ARG n 1 88 GLY n 1 89 TRP n 1 90 ILE n 1 91 PHE n 1 92 GLY n 1 93 THR n 1 94 THR n 1 95 LEU n 1 96 ASP n 1 97 SER n 1 98 LYS n 1 99 THR n 1 100 GLN n 1 101 SER n 1 102 LEU n 1 103 LEU n 1 104 ILE n 1 105 VAL n 1 106 ASN n 1 107 ASN n 1 108 ALA n 1 109 THR n 1 110 ASN n 1 111 VAL n 1 112 VAL n 1 113 ILE n 1 114 LYS n 1 115 VAL n 1 116 CYS n 1 117 GLU n 1 118 PHE n 1 119 GLN n 1 120 PHE n 1 121 CYS n 1 122 ASN n 1 123 ASP n 1 124 PRO n 1 125 PHE n 1 126 LEU n 1 127 ASP n 1 128 HIS n 1 129 LYS n 1 130 ASN n 1 131 ASN n 1 132 LYS n 1 133 SER n 1 134 TRP n 1 135 MET n 1 136 GLU n 1 137 SER n 1 138 GLU n 1 139 PHE n 1 140 ARG n 1 141 VAL n 1 142 TYR n 1 143 SER n 1 144 SER n 1 145 ALA n 1 146 ASN n 1 147 ASN n 1 148 CYS n 1 149 THR n 1 150 PHE n 1 151 GLU n 1 152 TYR n 1 153 VAL n 1 154 SER n 1 155 GLN n 1 156 PRO n 1 157 PHE n 1 158 LEU n 1 159 MET n 1 160 ASP n 1 161 LEU n 1 162 GLU n 1 163 GLY n 1 164 LYS n 1 165 GLN n 1 166 GLY n 1 167 ASN n 1 168 PHE n 1 169 LYS n 1 170 ASN n 1 171 LEU n 1 172 ARG n 1 173 GLU n 1 174 PHE n 1 175 VAL n 1 176 PHE n 1 177 LYS n 1 178 ASN n 1 179 ILE n 1 180 ASP n 1 181 GLY n 1 182 TYR n 1 183 PHE n 1 184 LYS n 1 185 ILE n 1 186 TYR n 1 187 SER n 1 188 LYS n 1 189 HIS n 1 190 THR n 1 191 PRO n 1 192 ILE n 1 193 ILE n 1 194 VAL n 1 195 ARG n 1 196 GLU n 1 197 PRO n 1 198 GLU n 1 199 ASP n 1 200 LEU n 1 201 PRO n 1 202 GLN n 1 203 GLY n 1 204 PHE n 1 205 SER n 1 206 ALA n 1 207 LEU n 1 208 GLU n 1 209 PRO n 1 210 LEU n 1 211 VAL n 1 212 ASP n 1 213 LEU n 1 214 PRO n 1 215 ILE n 1 216 GLY n 1 217 ILE n 1 218 ASN n 1 219 ILE n 1 220 THR n 1 221 ARG n 1 222 PHE n 1 223 GLN n 1 224 THR n 1 225 LEU n 1 226 LEU n 1 227 ALA n 1 228 LEU n 1 229 HIS n 1 230 ARG n 1 231 SER n 1 232 TYR n 1 233 LEU n 1 234 THR n 1 235 PRO n 1 236 GLY n 1 237 ASP n 1 238 SER n 1 239 SER n 1 240 SER n 1 241 GLY n 1 242 TRP n 1 243 THR n 1 244 ALA n 1 245 GLY n 1 246 ALA n 1 247 ALA n 1 248 ALA n 1 249 TYR n 1 250 TYR n 1 251 VAL n 1 252 GLY n 1 253 TYR n 1 254 LEU n 1 255 GLN n 1 256 PRO n 1 257 ARG n 1 258 THR n 1 259 PHE n 1 260 LEU n 1 261 LEU n 1 262 LYS n 1 263 TYR n 1 264 ASN n 1 265 GLU n 1 266 ASN n 1 267 GLY n 1 268 THR n 1 269 ILE n 1 270 THR n 1 271 ASP n 1 272 ALA n 1 273 VAL n 1 274 ASP n 1 275 CYS n 1 276 ALA n 1 277 LEU n 1 278 ASP n 1 279 PRO n 1 280 LEU n 1 281 SER n 1 282 GLU n 1 283 THR n 1 284 LYS n 1 285 CYS n 1 286 THR n 1 287 LEU n 1 288 LYS n 1 289 SER n 1 290 PHE n 1 291 THR n 1 292 VAL n 1 293 GLU n 1 294 LYS n 1 295 GLY n 1 296 ILE n 1 297 TYR n 1 298 GLN n 1 299 THR n 1 300 SER n 1 301 ASN n 1 302 PHE n 1 303 ARG n 1 304 VAL n 1 305 GLN n 1 306 PRO n 1 307 THR n 1 308 GLU n 1 309 SER n 1 310 ILE n 1 311 VAL n 1 312 ARG n 1 313 PHE n 1 314 PRO n 1 315 ASN n 1 316 ILE n 1 317 THR n 1 318 ASN n 1 319 LEU n 1 320 CYS n 1 321 PRO n 1 322 PHE n 1 323 ASP n 1 324 GLU n 1 325 VAL n 1 326 PHE n 1 327 ASN n 1 328 ALA n 1 329 THR n 1 330 ARG n 1 331 PHE n 1 332 ALA n 1 333 SER n 1 334 VAL n 1 335 TYR n 1 336 ALA n 1 337 TRP n 1 338 ASN n 1 339 ARG n 1 340 LYS n 1 341 ARG n 1 342 ILE n 1 343 SER n 1 344 ASN n 1 345 CYS n 1 346 VAL n 1 347 ALA n 1 348 ASP n 1 349 TYR n 1 350 SER n 1 351 VAL n 1 352 LEU n 1 353 TYR n 1 354 ASN n 1 355 LEU n 1 356 ALA n 1 357 PRO n 1 358 PHE n 1 359 PHE n 1 360 THR n 1 361 PHE n 1 362 LYS n 1 363 CYS n 1 364 TYR n 1 365 GLY n 1 366 VAL n 1 367 SER n 1 368 PRO n 1 369 THR n 1 370 LYS n 1 371 LEU n 1 372 ASN n 1 373 ASP n 1 374 LEU n 1 375 CYS n 1 376 PHE n 1 377 THR n 1 378 ASN n 1 379 VAL n 1 380 TYR n 1 381 ALA n 1 382 ASP n 1 383 SER n 1 384 PHE n 1 385 VAL n 1 386 ILE n 1 387 ARG n 1 388 GLY n 1 389 ASP n 1 390 GLU n 1 391 VAL n 1 392 ARG n 1 393 GLN n 1 394 ILE n 1 395 ALA n 1 396 PRO n 1 397 GLY n 1 398 GLN n 1 399 THR n 1 400 GLY n 1 401 ASN n 1 402 ILE n 1 403 ALA n 1 404 ASP n 1 405 TYR n 1 406 ASN n 1 407 TYR n 1 408 LYS n 1 409 LEU n 1 410 PRO n 1 411 ASP n 1 412 ASP n 1 413 PHE n 1 414 THR n 1 415 GLY n 1 416 CYS n 1 417 VAL n 1 418 ILE n 1 419 ALA n 1 420 TRP n 1 421 ASN n 1 422 SER n 1 423 ASN n 1 424 LYS n 1 425 LEU n 1 426 ASP n 1 427 SER n 1 428 LYS n 1 429 VAL n 1 430 SER n 1 431 GLY n 1 432 ASN n 1 433 TYR n 1 434 ASN n 1 435 TYR n 1 436 LEU n 1 437 TYR n 1 438 ARG n 1 439 LEU n 1 440 PHE n 1 441 ARG n 1 442 LYS n 1 443 SER n 1 444 ASN n 1 445 LEU n 1 446 LYS n 1 447 PRO n 1 448 PHE n 1 449 GLU n 1 450 ARG n 1 451 ASP n 1 452 ILE n 1 453 SER n 1 454 THR n 1 455 GLU n 1 456 ILE n 1 457 TYR n 1 458 GLN n 1 459 ALA n 1 460 GLY n 1 461 ASN n 1 462 LYS n 1 463 PRO n 1 464 CYS n 1 465 ASN n 1 466 GLY n 1 467 VAL n 1 468 ALA n 1 469 GLY n 1 470 PHE n 1 471 ASN n 1 472 CYS n 1 473 TYR n 1 474 PHE n 1 475 PRO n 1 476 LEU n 1 477 ARG n 1 478 SER n 1 479 TYR n 1 480 SER n 1 481 PHE n 1 482 ARG n 1 483 PRO n 1 484 THR n 1 485 TYR n 1 486 GLY n 1 487 VAL n 1 488 GLY n 1 489 HIS n 1 490 GLN n 1 491 PRO n 1 492 TYR n 1 493 ARG n 1 494 VAL n 1 495 VAL n 1 496 VAL n 1 497 LEU n 1 498 SER n 1 499 PHE n 1 500 GLU n 1 501 LEU n 1 502 LEU n 1 503 HIS n 1 504 ALA n 1 505 PRO n 1 506 ALA n 1 507 THR n 1 508 VAL n 1 509 CYS n 1 510 GLY n 2 1 PRO n 2 2 THR n 2 3 GLU n 2 4 SER n 2 5 ILE n 2 6 VAL n 2 7 ARG n 2 8 PHE n 2 9 PRO n 2 10 ASN n 2 11 ILE n 2 12 THR n 2 13 ASN n 2 14 LEU n 2 15 CYS n 2 16 PRO n 2 17 PHE n 2 18 ASP n 2 19 GLU n 2 20 VAL n 2 21 PHE n 2 22 ASN n 2 23 ALA n 2 24 THR n 2 25 ARG n 2 26 PHE n 2 27 ALA n 2 28 SER n 2 29 VAL n 2 30 TYR n 2 31 ALA n 2 32 TRP n 2 33 ASN n 2 34 ARG n 2 35 LYS n 2 36 ARG n 2 37 ILE n 2 38 SER n 2 39 ASN n 2 40 CYS n 2 41 VAL n 2 42 ALA n 2 43 ASP n 2 44 TYR n 2 45 SER n 2 46 VAL n 2 47 LEU n 2 48 TYR n 2 49 ASN n 2 50 LEU n 2 51 ALA n 2 52 PRO n 2 53 PHE n 2 54 PHE n 2 55 THR n 2 56 PHE n 2 57 LYS n 2 58 CYS n 2 59 TYR n 2 60 GLY n 2 61 VAL n 2 62 SER n 2 63 PRO n 2 64 THR n 2 65 LYS n 2 66 LEU n 2 67 ASN n 2 68 ASP n 2 69 LEU n 2 70 CYS n 2 71 PHE n 2 72 THR n 2 73 ASN n 2 74 VAL n 2 75 TYR n 2 76 ALA n 2 77 ASP n 2 78 SER n 2 79 PHE n 2 80 VAL n 2 81 ILE n 2 82 ARG n 2 83 GLY n 2 84 ASP n 2 85 GLU n 2 86 VAL n 2 87 ARG n 2 88 GLN n 2 89 ILE n 2 90 ALA n 2 91 PRO n 2 92 GLY n 2 93 GLN n 2 94 THR n 2 95 GLY n 2 96 ASN n 2 97 ILE n 2 98 ALA n 2 99 ASP n 2 100 TYR n 2 101 ASN n 2 102 TYR n 2 103 LYS n 2 104 LEU n 2 105 PRO n 2 106 ASP n 2 107 ASP n 2 108 PHE n 2 109 THR n 2 110 GLY n 2 111 CYS n 2 112 VAL n 2 113 ILE n 2 114 ALA n 2 115 TRP n 2 116 ASN n 2 117 SER n 2 118 ASN n 2 119 LYS n 2 120 LEU n 2 121 ASP n 2 122 SER n 2 123 LYS n 2 124 VAL n 2 125 SER n 2 126 GLY n 2 127 ASN n 2 128 TYR n 2 129 ASN n 2 130 TYR n 2 131 LEU n 2 132 TYR n 2 133 ARG n 2 134 LEU n 2 135 PHE n 2 136 ARG n 2 137 LYS n 2 138 SER n 2 139 ASN n 2 140 LEU n 2 141 LYS n 2 142 PRO n 2 143 PHE n 2 144 GLU n 2 145 ARG n 2 146 ASP n 2 147 ILE n 2 148 SER n 2 149 THR n 2 150 GLU n 2 151 ILE n 2 152 TYR n 2 153 GLN n 2 154 ALA n 2 155 GLY n 2 156 ASN n 2 157 LYS n 2 158 PRO n 2 159 CYS n 2 160 ASN n 2 161 GLY n 2 162 VAL n 2 163 ALA n 2 164 GLY n 2 165 PHE n 2 166 ASN n 2 167 CYS n 2 168 TYR n 2 169 PHE n 2 170 PRO n 2 171 LEU n 2 172 ARG n 2 173 SER n 2 174 TYR n 2 175 SER n 2 176 PHE n 2 177 ARG n 2 178 PRO n 2 179 THR n 2 180 TYR n 2 181 GLY n 2 182 VAL n 2 183 GLY n 2 184 HIS n 2 185 GLN n 2 186 PRO n 2 187 TYR n 2 188 ARG n 2 189 VAL n 2 190 VAL n 2 191 VAL n 2 192 LEU n 2 193 SER n 2 194 PHE n 2 195 GLU n 2 196 LEU n 2 197 LEU n 2 198 HIS n 2 199 ALA n 2 200 PRO n 2 201 ALA n 2 202 THR n 2 203 VAL n 2 204 CYS n 2 205 GLY n 2 206 PRO n 2 207 LYS n 2 208 LYS n 2 209 SER n 2 210 THR n 2 211 ASN n 2 212 LEU n 2 213 VAL n 2 214 LYS n 2 215 ASN n 2 216 LYS n 2 217 CYS n 2 218 VAL n 2 219 ASN n 2 220 PHE n 2 221 ASN n 2 222 PHE n 2 223 ASN n 2 224 GLY n 2 225 LEU n 2 226 LYS n 2 227 GLY n 2 228 THR n 2 229 GLY n 2 230 VAL n 2 231 LEU n 2 232 THR n 2 233 GLU n 2 234 SER n 2 235 ASN n 2 236 LYS n 2 237 LYS n 2 238 PHE n 2 239 LEU n 2 240 PRO n 2 241 PHE n 2 242 GLN n 2 243 GLN n 2 244 PHE n 2 245 GLY n 2 246 ARG n 2 247 ASP n 2 248 ILE n 2 249 ALA n 2 250 ASP n 2 251 THR n 2 252 THR n 2 253 ASP n 2 254 ALA n 2 255 VAL n 2 256 ARG n 2 257 ASP n 2 258 PRO n 2 259 GLN n 2 260 THR n 2 261 LEU n 2 262 GLU n 2 263 ILE n 2 264 LEU n 2 265 ASP n 2 266 ILE n 2 267 THR n 3 1 GLU n 3 2 VAL n 3 3 GLN n 3 4 LEU n 3 5 VAL n 3 6 GLU n 3 7 SER n 3 8 GLY n 3 9 GLY n 3 10 GLY n 3 11 LEU n 3 12 ILE n 3 13 GLN n 3 14 PRO n 3 15 GLY n 3 16 GLY n 3 17 SER n 3 18 LEU n 3 19 ARG n 3 20 LEU n 3 21 SER n 3 22 CYS n 3 23 ALA n 3 24 ALA n 3 25 SER n 3 26 GLY n 3 27 LEU n 3 28 THR n 3 29 VAL n 3 30 SER n 3 31 SER n 3 32 ASN n 3 33 TYR n 3 34 MET n 3 35 HIS n 3 36 TRP n 3 37 VAL n 3 38 ARG n 3 39 GLN n 3 40 ALA n 3 41 PRO n 3 42 GLY n 3 43 LYS n 3 44 GLY n 3 45 LEU n 3 46 GLU n 3 47 TRP n 3 48 VAL n 3 49 SER n 3 50 VAL n 3 51 LEU n 3 52 TYR n 3 53 ALA n 3 54 GLY n 3 55 GLY n 3 56 SER n 3 57 ALA n 3 58 PHE n 3 59 TYR n 3 60 ALA n 3 61 ASP n 3 62 SER n 3 63 VAL n 3 64 LYS n 3 65 GLY n 3 66 ARG n 3 67 PHE n 3 68 THR n 3 69 ILE n 3 70 SER n 3 71 ARG n 3 72 ASN n 3 73 ASN n 3 74 SER n 3 75 LYS n 3 76 ASN n 3 77 THR n 3 78 LEU n 3 79 TYR n 3 80 LEU n 3 81 GLN n 3 82 MET n 3 83 ASN n 3 84 SER n 3 85 LEU n 3 86 ARG n 3 87 ALA n 3 88 GLU n 3 89 ASP n 3 90 THR n 3 91 ALA n 3 92 ILE n 3 93 TYR n 3 94 TYR n 3 95 CYS n 3 96 ALA n 3 97 ARG n 3 98 GLY n 3 99 LEU n 3 100 GLY n 3 101 ASP n 3 102 TYR n 3 103 LEU n 3 104 ASP n 3 105 SER n 3 106 TRP n 3 107 GLY n 3 108 GLN n 3 109 GLY n 3 110 THR n 3 111 LEU n 3 112 VAL n 3 113 THR n 3 114 VAL n 3 115 SER n 4 1 ASP n 4 2 ILE n 4 3 GLN n 4 4 MET n 4 5 THR n 4 6 GLN n 4 7 SER n 4 8 PRO n 4 9 SER n 4 10 SER n 4 11 VAL n 4 12 SER n 4 13 ALA n 4 14 SER n 4 15 VAL n 4 16 GLY n 4 17 ASP n 4 18 ARG n 4 19 VAL n 4 20 THR n 4 21 ILE n 4 22 THR n 4 23 CYS n 4 24 ARG n 4 25 ALA n 4 26 SER n 4 27 GLN n 4 28 GLY n 4 29 ILE n 4 30 GLY n 4 31 SER n 4 32 TRP n 4 33 LEU n 4 34 ALA n 4 35 TRP n 4 36 TYR n 4 37 GLN n 4 38 GLN n 4 39 LYS n 4 40 PRO n 4 41 GLY n 4 42 LYS n 4 43 ALA n 4 44 PRO n 4 45 GLN n 4 46 LEU n 4 47 LEU n 4 48 ILE n 4 49 TYR n 4 50 ALA n 4 51 ALA n 4 52 SER n 4 53 THR n 4 54 LEU n 4 55 GLN n 4 56 SER n 4 57 GLY n 4 58 VAL n 4 59 PRO n 4 60 PRO n 4 61 ARG n 4 62 PHE n 4 63 SER n 4 64 GLY n 4 65 SER n 4 66 GLY n 4 67 SER n 4 68 GLY n 4 69 THR n 4 70 ASP n 4 71 PHE n 4 72 THR n 4 73 LEU n 4 74 THR n 4 75 ILE n 4 76 THR n 4 77 SER n 4 78 LEU n 4 79 GLN n 4 80 PRO n 4 81 GLU n 4 82 ASP n 4 83 PHE n 4 84 ALA n 4 85 SER n 4 86 TYR n 4 87 TYR n 4 88 CYS n 4 89 GLN n 4 90 GLN n 4 91 ALA n 4 92 ASN n 4 93 SER n 4 94 VAL n 4 95 LEU n 4 96 ALA n 4 97 LEU n 4 98 THR n 4 99 PHE n 4 100 GLY n 4 101 GLY n 4 102 GLY n 4 103 THR n 4 104 LYS n 4 105 VAL n 4 106 GLU n 4 107 ILE n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 510 '2019-nCoV, SARS-CoV-2' ? 'S, 2' ? ? ? ? ? ? 'Severe acute respiratory syndrome coronavirus 2' 2697049 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? HEK293 ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 267 '2019-nCoV, SARS-CoV-2' ? 'S, 2' ? ? ? ? ? ? 'Severe acute respiratory syndrome coronavirus 2' 2697049 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? HEK293 ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 115 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? HEK293 ? ? ? ? ? ? ? ? ? ? ? ? 4 1 sample 'Biological sequence' 1 107 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? HEK293 ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP SPIKE_SARS2 P0DTC2 ? 1 ;QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFA STEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQ PFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGD SSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNIT NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPG QTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQ SYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG ; 14 2 UNP SPIKE_SARS2 P0DTC2 ? 2 ;PTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFV IRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCN GVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLP FQQFGRDIADTTDAVRDPQTLEILDIT ; 322 3 PDB 8HC7 8HC7 ? 3 ? 1 4 PDB 8HC7 8HC7 ? 4 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8HC7 C 1 ? 510 ? P0DTC2 14 ? 526 ? 14 526 2 2 8HC7 A 1 ? 267 ? P0DTC2 322 ? 588 ? 322 588 3 3 8HC7 H 1 ? 115 ? 8HC7 1 ? 115 ? 1 115 4 4 8HC7 L 1 ? 107 ? 8HC7 1 ? 107 ? 1 107 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8HC7 VAL C 54 ? UNP P0DTC2 ALA 67 variant 67 1 1 8HC7 ? C ? ? UNP P0DTC2 HIS 69 deletion ? 2 1 8HC7 ? C ? ? UNP P0DTC2 VAL 70 deletion ? 3 1 8HC7 ILE C 80 ? UNP P0DTC2 THR 95 variant 95 4 1 8HC7 ? C ? ? UNP P0DTC2 GLY 142 deletion ? 5 1 8HC7 ? C ? ? UNP P0DTC2 VAL 143 deletion ? 6 1 8HC7 ? C ? ? UNP P0DTC2 TYR 144 deletion ? 7 1 8HC7 ASP C 127 ? UNP P0DTC2 TYR 145 variant 142 8 1 8HC7 ILE C 193 A UNP P0DTC2 ? ? insertion 210 9 1 8HC7 VAL C 194 B UNP P0DTC2 ? ? insertion 210 10 1 8HC7 ARG C 195 C UNP P0DTC2 ASN 211 variant 210 11 1 8HC7 GLU C 196 D UNP P0DTC2 LEU 212 variant 210 12 1 8HC7 PRO C 197 E UNP P0DTC2 VAL 213 variant 210 13 1 8HC7 GLU C 198 F UNP P0DTC2 ARG 214 variant 210 14 1 8HC7 ASP C 323 ? UNP P0DTC2 GLY 339 variant 339 15 1 8HC7 LEU C 355 ? UNP P0DTC2 SER 371 variant 371 16 1 8HC7 PRO C 357 ? UNP P0DTC2 SER 373 variant 373 17 1 8HC7 PHE C 359 ? UNP P0DTC2 SER 375 variant 375 18 1 8HC7 ASN C 401 ? UNP P0DTC2 LYS 417 variant 417 19 1 8HC7 LYS C 424 ? UNP P0DTC2 ASN 440 variant 440 20 1 8HC7 SER C 430 ? UNP P0DTC2 GLY 446 variant 446 21 1 8HC7 ASN C 461 ? UNP P0DTC2 SER 477 variant 477 22 1 8HC7 LYS C 462 ? UNP P0DTC2 THR 478 variant 478 23 1 8HC7 ALA C 468 ? UNP P0DTC2 GLU 484 variant 484 24 1 8HC7 ARG C 477 ? UNP P0DTC2 GLN 493 variant 493 25 1 8HC7 SER C 480 ? UNP P0DTC2 GLY 496 variant 496 26 1 8HC7 ARG C 482 ? UNP P0DTC2 GLN 498 variant 498 27 1 8HC7 TYR C 485 ? UNP P0DTC2 ASN 501 variant 501 28 1 8HC7 HIS C 489 ? UNP P0DTC2 TYR 505 variant 505 29 2 8HC7 ASP A 18 ? UNP P0DTC2 GLY 339 variant 339 30 2 8HC7 LEU A 50 ? UNP P0DTC2 SER 371 variant 371 31 2 8HC7 PRO A 52 ? UNP P0DTC2 SER 373 variant 373 32 2 8HC7 PHE A 54 ? UNP P0DTC2 SER 375 variant 375 33 2 8HC7 ASN A 96 ? UNP P0DTC2 LYS 417 variant 417 34 2 8HC7 LYS A 119 ? UNP P0DTC2 ASN 440 variant 440 35 2 8HC7 SER A 125 ? UNP P0DTC2 GLY 446 variant 446 36 2 8HC7 ASN A 156 ? UNP P0DTC2 SER 477 variant 477 37 2 8HC7 LYS A 157 ? UNP P0DTC2 THR 478 variant 478 38 2 8HC7 ALA A 163 ? UNP P0DTC2 GLU 484 variant 484 39 2 8HC7 ARG A 172 ? UNP P0DTC2 GLN 493 variant 493 40 2 8HC7 SER A 175 ? UNP P0DTC2 GLY 496 variant 496 41 2 8HC7 ARG A 177 ? UNP P0DTC2 GLN 498 variant 498 42 2 8HC7 TYR A 180 ? UNP P0DTC2 ASN 501 variant 501 43 2 8HC7 HIS A 184 ? UNP P0DTC2 TYR 505 variant 505 44 2 8HC7 LYS A 226 ? UNP P0DTC2 THR 547 variant 547 45 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8HC7 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 8HC7 _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.002 ? 7562 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.572 ? 10278 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 3.394 ? 1048 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.044 ? 1140 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.004 ? 1317 ? f_plane_restr ? ? # _struct.entry_id 8HC7 _struct.title 'SARS-CoV-2 Omicron BA.1 spike trimer (6P) complex with YB9-258 Fab, focused refinement of RBD-dimer region' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8HC7 _struct_keywords.text 'Spike protein, RBD, Antibody, Fab, Viral protein, VIRAL PROTEIN-IMMUNE SYSTEM complex' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN/IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 5 ? I N N 5 ? J N N 5 ? K N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PHE A 322 ? ASN A 327 ? PHE C 338 ASN C 343 1 ? 6 HELX_P HELX_P2 AA2 TYR A 349 ? ASN A 354 ? TYR C 365 ASN C 370 1 ? 6 HELX_P HELX_P3 AA3 THR A 369 ? ASP A 373 ? THR C 385 ASP C 389 5 ? 5 HELX_P HELX_P4 AA4 GLY A 388 ? ILE A 394 ? GLY C 404 ILE C 410 1 ? 7 HELX_P HELX_P5 AA5 GLY A 400 ? ASN A 406 ? GLY C 416 ASN C 422 1 ? 7 HELX_P HELX_P6 AA6 PRO B 16 ? PHE B 21 ? PRO A 337 PHE A 342 1 ? 6 HELX_P HELX_P7 AA7 ASP B 43 ? ASN B 49 ? ASP A 364 ASN A 370 5 ? 7 HELX_P HELX_P8 AA8 LYS B 65 ? CYS B 70 ? LYS A 386 CYS A 391 1 ? 6 HELX_P HELX_P9 AA9 GLU B 85 ? ALA B 90 ? GLU A 406 ALA A 411 5 ? 6 HELX_P HELX_P10 AB1 ASN B 96 ? ASN B 101 ? ASN A 417 ASN A 422 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 2 SG ? ? ? 1_555 A CYS 121 SG ? ? C CYS 15 C CYS 136 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf2 disulf ? ? A CYS 116 SG ? ? ? 1_555 A CYS 148 SG ? ? C CYS 131 C CYS 166 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf3 disulf ? ? A CYS 320 SG ? ? ? 1_555 A CYS 345 SG ? ? C CYS 336 C CYS 361 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf4 disulf ? ? A CYS 363 SG ? ? ? 1_555 A CYS 416 SG ? ? C CYS 379 C CYS 432 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf5 disulf ? ? A CYS 375 SG ? ? ? 1_555 A CYS 509 SG ? ? C CYS 391 C CYS 525 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf6 disulf ? ? A CYS 464 SG ? ? ? 1_555 A CYS 472 SG ? ? C CYS 480 C CYS 488 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf7 disulf ? ? B CYS 15 SG ? ? ? 1_555 B CYS 40 SG ? ? A CYS 336 A CYS 361 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf8 disulf ? ? B CYS 58 SG ? ? ? 1_555 B CYS 111 SG ? ? A CYS 379 A CYS 432 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf9 disulf ? ? B CYS 70 SG ? ? ? 1_555 B CYS 204 SG ? ? A CYS 391 A CYS 525 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf10 disulf ? ? B CYS 159 SG ? ? ? 1_555 B CYS 167 SG ? ? A CYS 480 A CYS 488 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf11 disulf ? ? C CYS 22 SG ? ? ? 1_555 C CYS 95 SG ? ? H CYS 22 H CYS 95 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf12 disulf ? ? D CYS 23 SG ? ? ? 1_555 D CYS 88 SG ? ? L CYS 23 L CYS 88 1_555 ? ? ? ? ? ? ? 2.032 ? ? covale1 covale one ? A ASN 48 ND2 ? ? ? 1_555 E NAG . C1 ? ? C ASN 61 C NAG 1301 1_555 ? ? ? ? ? ? ? 1.441 ? N-Glycosylation covale2 covale one ? A ASN 107 ND2 ? ? ? 1_555 F NAG . C1 ? ? C ASN 122 C NAG 1302 1_555 ? ? ? ? ? ? ? 1.445 ? N-Glycosylation covale3 covale one ? A ASN 147 ND2 ? ? ? 1_555 G NAG . C1 ? ? C ASN 165 C NAG 1303 1_555 ? ? ? ? ? ? ? 1.444 ? N-Glycosylation covale4 covale one ? A ASN 218 ND2 ? ? ? 1_555 H NAG . C1 ? ? C ASN 234 C NAG 1304 1_555 ? ? ? ? ? ? ? 1.441 ? N-Glycosylation covale5 covale one ? A ASN 266 ND2 ? ? ? 1_555 I NAG . C1 ? ? C ASN 282 C NAG 1305 1_555 ? ? ? ? ? ? ? 1.441 ? N-Glycosylation covale6 covale one ? A ASN 327 ND2 ? ? ? 1_555 J NAG . C1 ? ? C ASN 343 C NAG 1306 1_555 ? ? ? ? ? ? ? 1.441 ? N-Glycosylation covale7 covale one ? B ASN 22 ND2 ? ? ? 1_555 K NAG . C1 ? ? A ASN 343 A NAG 601 1_555 ? ? ? ? ? ? ? 1.440 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 7 ? AA3 ? 3 ? AA4 ? 2 ? AA5 ? 3 ? AA6 ? 3 ? AA7 ? 2 ? AA8 ? 4 ? AA9 ? 3 ? AB1 ? 2 ? AB2 ? 2 ? AB3 ? 4 ? AB4 ? 6 ? AB5 ? 4 ? AB6 ? 2 ? AB7 ? 2 ? AB8 ? 4 ? AB9 ? 2 ? AC1 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA2 6 7 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA4 1 2 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA7 1 2 ? anti-parallel AA8 1 2 ? anti-parallel AA8 2 3 ? anti-parallel AA8 3 4 ? anti-parallel AA9 1 2 ? anti-parallel AA9 2 3 ? anti-parallel AB1 1 2 ? anti-parallel AB2 1 2 ? anti-parallel AB3 1 2 ? anti-parallel AB3 2 3 ? anti-parallel AB3 3 4 ? anti-parallel AB4 1 2 ? parallel AB4 2 3 ? anti-parallel AB4 3 4 ? anti-parallel AB4 4 5 ? anti-parallel AB4 5 6 ? anti-parallel AB5 1 2 ? parallel AB5 2 3 ? anti-parallel AB5 3 4 ? anti-parallel AB6 1 2 ? anti-parallel AB7 1 2 ? parallel AB8 1 2 ? anti-parallel AB8 2 3 ? anti-parallel AB8 3 4 ? anti-parallel AB9 1 2 ? anti-parallel AC1 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ALA A 14 ? ASN A 17 ? ALA C 27 ASN C 30 AA1 2 ASN A 48 ? VAL A 54 ? ASN C 61 VAL C 67 AA1 3 ALA A 247 ? TYR A 253 ? ALA C 263 TYR C 269 AA1 4 VAL A 75 ? GLU A 81 ? VAL C 90 GLU C 96 AA1 5 ASN A 170 ? ILE A 179 ? ASN C 188 ILE C 197 AA1 6 HIS A 189 ? PRO A 191 ? HIS C 207 PRO C 209 AA2 1 ALA A 14 ? ASN A 17 ? ALA C 27 ASN C 30 AA2 2 ASN A 48 ? VAL A 54 ? ASN C 61 VAL C 67 AA2 3 ALA A 247 ? TYR A 253 ? ALA C 263 TYR C 269 AA2 4 VAL A 75 ? GLU A 81 ? VAL C 90 GLU C 96 AA2 5 ASN A 170 ? ILE A 179 ? ASN C 188 ILE C 197 AA2 6 TYR A 182 ? TYR A 186 ? TYR C 200 TYR C 204 AA2 7 PRO A 209 ? LEU A 213 ? PRO C 225 LEU C 229 AA3 1 HIS A 36 ? THR A 38 ? HIS C 49 THR C 51 AA3 2 PHE A 259 ? LYS A 262 ? PHE C 275 LYS C 278 AA3 3 ASP A 271 ? VAL A 273 ? ASP C 287 VAL C 289 AA4 1 LEU A 41 ? PHE A 42 ? LEU C 54 PHE C 55 AA4 2 GLN A 255 ? PRO A 256 ? GLN C 271 PRO C 272 AA5 1 VAL A 68 ? PRO A 70 ? VAL C 83 PRO C 85 AA5 2 ARG A 221 ? THR A 224 ? ARG C 237 THR C 240 AA5 3 TRP A 89 ? GLY A 92 ? TRP C 104 GLY C 107 AA6 1 ILE A 104 ? ASN A 106 ? ILE C 119 ASN C 121 AA6 2 VAL A 111 ? LYS A 114 ? VAL C 126 LYS C 129 AA6 3 GLU A 151 ? SER A 154 ? GLU C 169 SER C 172 AA7 1 PHE A 125 ? ASP A 127 ? PHE C 140 ASP C 142 AA7 2 GLU A 138 ? ARG A 140 ? GLU C 156 ARG C 158 AA8 1 ASN A 338 ? LYS A 340 ? ASN C 354 LYS C 356 AA8 2 VAL A 379 ? ARG A 387 ? VAL C 395 ARG C 403 AA8 3 PRO A 491 ? PHE A 499 ? PRO C 507 PHE C 515 AA8 4 CYS A 416 ? ASN A 421 ? CYS C 432 ASN C 437 AA9 1 ALA B 76 ? ARG B 82 ? ALA A 397 ARG A 403 AA9 2 PRO B 186 ? SER B 193 ? PRO A 507 SER A 514 AA9 3 GLY B 110 ? TRP B 115 ? GLY A 431 TRP A 436 AB1 1 LEU B 131 ? ARG B 133 ? LEU A 452 ARG A 454 AB1 2 LEU B 171 ? SER B 173 ? LEU A 492 SER A 494 AB2 1 VAL B 218 ? PHE B 222 ? VAL A 539 PHE A 543 AB2 2 LEU B 225 ? GLY B 229 ? LEU A 546 GLY A 550 AB3 1 GLN C 3 ? SER C 7 ? GLN H 3 SER H 7 AB3 2 LEU C 18 ? SER C 25 ? LEU H 18 SER H 25 AB3 3 THR C 77 ? MET C 82 ? THR H 77 MET H 82 AB3 4 PHE C 67 ? THR C 68 ? PHE H 67 THR H 68 AB4 1 GLY C 10 ? LEU C 11 ? GLY H 10 LEU H 11 AB4 2 THR C 110 ? THR C 113 ? THR H 110 THR H 113 AB4 3 ILE C 92 ? LEU C 99 ? ILE H 92 LEU H 99 AB4 4 TYR C 33 ? GLN C 39 ? TYR H 33 GLN H 39 AB4 5 TRP C 47 ? LEU C 51 ? TRP H 47 LEU H 51 AB4 6 ALA C 57 ? PHE C 58 ? ALA H 57 PHE H 58 AB5 1 GLY C 10 ? LEU C 11 ? GLY H 10 LEU H 11 AB5 2 THR C 110 ? THR C 113 ? THR H 110 THR H 113 AB5 3 ILE C 92 ? LEU C 99 ? ILE H 92 LEU H 99 AB5 4 TYR C 102 ? SER C 105 ? TYR H 102 SER H 105 AB6 1 MET D 4 ? THR D 5 ? MET L 4 THR L 5 AB6 2 ARG D 24 ? ALA D 25 ? ARG L 24 ALA L 25 AB7 1 SER D 10 ? SER D 12 ? SER L 10 SER L 12 AB7 2 LYS D 104 ? GLU D 106 ? LYS L 104 GLU L 106 AB8 1 GLN D 45 ? LEU D 46 ? GLN L 45 LEU L 46 AB8 2 ALA D 34 ? GLN D 37 ? ALA L 34 GLN L 37 AB8 3 TYR D 87 ? ALA D 91 ? TYR L 87 ALA L 91 AB8 4 LEU D 97 ? PHE D 99 ? LEU L 97 PHE L 99 AB9 1 ILE D 48 ? TYR D 49 ? ILE L 48 TYR L 49 AB9 2 THR D 53 ? LEU D 54 ? THR L 53 LEU L 54 AC1 1 PHE D 62 ? SER D 65 ? PHE L 62 SER L 65 AC1 2 THR D 72 ? ILE D 75 ? THR L 72 ILE L 75 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ALA A 14 ? N ALA C 27 O TRP A 51 ? O TRP C 64 AA1 2 3 N VAL A 54 ? N VAL C 67 O ALA A 247 ? O ALA C 263 AA1 3 4 O TYR A 250 ? O TYR C 266 N ALA A 78 ? N ALA C 93 AA1 4 5 N PHE A 77 ? N PHE C 92 O PHE A 174 ? O PHE C 192 AA1 5 6 N LEU A 171 ? N LEU C 189 O THR A 190 ? O THR C 208 AA2 1 2 N ALA A 14 ? N ALA C 27 O TRP A 51 ? O TRP C 64 AA2 2 3 N VAL A 54 ? N VAL C 67 O ALA A 247 ? O ALA C 263 AA2 3 4 O TYR A 250 ? O TYR C 266 N ALA A 78 ? N ALA C 93 AA2 4 5 N PHE A 77 ? N PHE C 92 O PHE A 174 ? O PHE C 192 AA2 5 6 N LYS A 177 ? N LYS C 195 O LYS A 184 ? O LYS C 202 AA2 6 7 N PHE A 183 ? N PHE C 201 O LEU A 213 ? O LEU C 229 AA3 1 2 N HIS A 36 ? N HIS C 49 O LEU A 261 ? O LEU C 277 AA3 2 3 N LEU A 260 ? N LEU C 276 O VAL A 273 ? O VAL C 289 AA4 1 2 N PHE A 42 ? N PHE C 55 O GLN A 255 ? O GLN C 271 AA5 1 2 N LEU A 69 ? N LEU C 84 O PHE A 222 ? O PHE C 238 AA5 2 3 O GLN A 223 ? O GLN C 239 N ILE A 90 ? N ILE C 105 AA6 1 2 N VAL A 105 ? N VAL C 120 O VAL A 112 ? O VAL C 127 AA6 2 3 N ILE A 113 ? N ILE C 128 O TYR A 152 ? O TYR C 170 AA7 1 2 N ASP A 127 ? N ASP C 142 O GLU A 138 ? O GLU C 156 AA8 1 2 N ASN A 338 ? N ASN C 354 O SER A 383 ? O SER C 399 AA8 2 3 N ILE A 386 ? N ILE C 402 O TYR A 492 ? O TYR C 508 AA8 3 4 O VAL A 495 ? O VAL C 511 N ILE A 418 ? N ILE C 434 AA9 1 2 N ILE B 81 ? N ILE A 402 O TYR B 187 ? O TYR A 508 AA9 2 3 O VAL B 190 ? O VAL A 511 N ILE B 113 ? N ILE A 434 AB1 1 2 N TYR B 132 ? N TYR A 453 O ARG B 172 ? O ARG A 493 AB2 1 2 N PHE B 222 ? N PHE A 543 O LEU B 225 ? O LEU A 546 AB3 1 2 N SER C 7 ? N SER H 7 O SER C 21 ? O SER H 21 AB3 2 3 N CYS C 22 ? N CYS H 22 O LEU C 78 ? O LEU H 78 AB3 3 4 O GLN C 81 ? O GLN H 81 N THR C 68 ? N THR H 68 AB4 1 2 N GLY C 10 ? N GLY H 10 O THR C 113 ? O THR H 113 AB4 2 3 O THR C 110 ? O THR H 110 N TYR C 93 ? N TYR H 93 AB4 3 4 O ALA C 96 ? O ALA H 96 N HIS C 35 ? N HIS H 35 AB4 4 5 N MET C 34 ? N MET H 34 O LEU C 51 ? O LEU H 51 AB4 5 6 N VAL C 50 ? N VAL H 50 O PHE C 58 ? O PHE H 58 AB5 1 2 N GLY C 10 ? N GLY H 10 O THR C 113 ? O THR H 113 AB5 2 3 O THR C 110 ? O THR H 110 N TYR C 93 ? N TYR H 93 AB5 3 4 N ARG C 97 ? N ARG H 97 O SER C 105 ? O SER H 105 AB6 1 2 N THR D 5 ? N THR L 5 O ARG D 24 ? O ARG L 24 AB7 1 2 N VAL D 11 ? N VAL L 11 O LYS D 104 ? O LYS L 104 AB8 1 2 O GLN D 45 ? O GLN L 45 N GLN D 37 ? N GLN L 37 AB8 2 3 N ALA D 34 ? N ALA L 34 O GLN D 89 ? O GLN L 89 AB8 3 4 N GLN D 90 ? N GLN L 90 O THR D 98 ? O THR L 98 AB9 1 2 N TYR D 49 ? N TYR L 49 O THR D 53 ? O THR L 53 AC1 1 2 N SER D 63 ? N SER L 63 O THR D 74 ? O THR L 74 # _atom_sites.entry_id 8HC7 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 14 14 GLN GLN C . n A 1 2 CYS 2 15 15 CYS CYS C . n A 1 3 VAL 3 16 16 VAL VAL C . n A 1 4 ASN 4 17 17 ASN ASN C . n A 1 5 LEU 5 18 18 LEU LEU C . n A 1 6 THR 6 19 19 THR THR C . n A 1 7 THR 7 20 20 THR THR C . n A 1 8 ARG 8 21 21 ARG ARG C . n A 1 9 THR 9 22 22 THR THR C . n A 1 10 GLN 10 23 23 GLN GLN C . n A 1 11 LEU 11 24 24 LEU LEU C . n A 1 12 PRO 12 25 25 PRO PRO C . n A 1 13 PRO 13 26 26 PRO PRO C . n A 1 14 ALA 14 27 27 ALA ALA C . n A 1 15 TYR 15 28 28 TYR TYR C . n A 1 16 THR 16 29 29 THR THR C . n A 1 17 ASN 17 30 30 ASN ASN C . n A 1 18 SER 18 31 31 SER SER C . n A 1 19 PHE 19 32 32 PHE PHE C . n A 1 20 THR 20 33 33 THR THR C . n A 1 21 ARG 21 34 34 ARG ARG C . n A 1 22 GLY 22 35 35 GLY GLY C . n A 1 23 VAL 23 36 36 VAL VAL C . n A 1 24 TYR 24 37 37 TYR TYR C . n A 1 25 TYR 25 38 38 TYR TYR C . n A 1 26 PRO 26 39 39 PRO PRO C . n A 1 27 ASP 27 40 40 ASP ASP C . n A 1 28 LYS 28 41 41 LYS LYS C . n A 1 29 VAL 29 42 42 VAL VAL C . n A 1 30 PHE 30 43 43 PHE PHE C . n A 1 31 ARG 31 44 44 ARG ARG C . n A 1 32 SER 32 45 45 SER SER C . n A 1 33 SER 33 46 46 SER SER C . n A 1 34 VAL 34 47 47 VAL VAL C . n A 1 35 LEU 35 48 48 LEU LEU C . n A 1 36 HIS 36 49 49 HIS HIS C . n A 1 37 SER 37 50 50 SER SER C . n A 1 38 THR 38 51 51 THR THR C . n A 1 39 GLN 39 52 52 GLN GLN C . n A 1 40 ASP 40 53 53 ASP ASP C . n A 1 41 LEU 41 54 54 LEU LEU C . n A 1 42 PHE 42 55 55 PHE PHE C . n A 1 43 LEU 43 56 56 LEU LEU C . n A 1 44 PRO 44 57 57 PRO PRO C . n A 1 45 PHE 45 58 58 PHE PHE C . n A 1 46 PHE 46 59 59 PHE PHE C . n A 1 47 SER 47 60 60 SER SER C . n A 1 48 ASN 48 61 61 ASN ASN C . n A 1 49 VAL 49 62 62 VAL VAL C . n A 1 50 THR 50 63 63 THR THR C . n A 1 51 TRP 51 64 64 TRP TRP C . n A 1 52 PHE 52 65 65 PHE PHE C . n A 1 53 HIS 53 66 66 HIS HIS C . n A 1 54 VAL 54 67 67 VAL VAL C . n A 1 55 ILE 55 68 68 ILE ILE C . n A 1 56 SER 56 71 ? ? ? C . n A 1 57 GLY 57 72 ? ? ? C . n A 1 58 THR 58 73 ? ? ? C . n A 1 59 ASN 59 74 ? ? ? C . n A 1 60 GLY 60 75 ? ? ? C . n A 1 61 THR 61 76 ? ? ? C . n A 1 62 LYS 62 77 77 LYS LYS C . n A 1 63 ARG 63 78 78 ARG ARG C . n A 1 64 PHE 64 79 79 PHE PHE C . n A 1 65 ASP 65 80 80 ASP ASP C . n A 1 66 ASN 66 81 81 ASN ASN C . n A 1 67 PRO 67 82 82 PRO PRO C . n A 1 68 VAL 68 83 83 VAL VAL C . n A 1 69 LEU 69 84 84 LEU LEU C . n A 1 70 PRO 70 85 85 PRO PRO C . n A 1 71 PHE 71 86 86 PHE PHE C . n A 1 72 ASN 72 87 87 ASN ASN C . n A 1 73 ASP 73 88 88 ASP ASP C . n A 1 74 GLY 74 89 89 GLY GLY C . n A 1 75 VAL 75 90 90 VAL VAL C . n A 1 76 TYR 76 91 91 TYR TYR C . n A 1 77 PHE 77 92 92 PHE PHE C . n A 1 78 ALA 78 93 93 ALA ALA C . n A 1 79 SER 79 94 94 SER SER C . n A 1 80 ILE 80 95 95 ILE ILE C . n A 1 81 GLU 81 96 96 GLU GLU C . n A 1 82 LYS 82 97 97 LYS LYS C . n A 1 83 SER 83 98 98 SER SER C . n A 1 84 ASN 84 99 99 ASN ASN C . n A 1 85 ILE 85 100 100 ILE ILE C . n A 1 86 ILE 86 101 101 ILE ILE C . n A 1 87 ARG 87 102 102 ARG ARG C . n A 1 88 GLY 88 103 103 GLY GLY C . n A 1 89 TRP 89 104 104 TRP TRP C . n A 1 90 ILE 90 105 105 ILE ILE C . n A 1 91 PHE 91 106 106 PHE PHE C . n A 1 92 GLY 92 107 107 GLY GLY C . n A 1 93 THR 93 108 108 THR THR C . n A 1 94 THR 94 109 109 THR THR C . n A 1 95 LEU 95 110 110 LEU LEU C . n A 1 96 ASP 96 111 111 ASP ASP C . n A 1 97 SER 97 112 112 SER SER C . n A 1 98 LYS 98 113 113 LYS LYS C . n A 1 99 THR 99 114 114 THR THR C . n A 1 100 GLN 100 115 115 GLN GLN C . n A 1 101 SER 101 116 116 SER SER C . n A 1 102 LEU 102 117 117 LEU LEU C . n A 1 103 LEU 103 118 118 LEU LEU C . n A 1 104 ILE 104 119 119 ILE ILE C . n A 1 105 VAL 105 120 120 VAL VAL C . n A 1 106 ASN 106 121 121 ASN ASN C . n A 1 107 ASN 107 122 122 ASN ASN C . n A 1 108 ALA 108 123 123 ALA ALA C . n A 1 109 THR 109 124 124 THR THR C . n A 1 110 ASN 110 125 125 ASN ASN C . n A 1 111 VAL 111 126 126 VAL VAL C . n A 1 112 VAL 112 127 127 VAL VAL C . n A 1 113 ILE 113 128 128 ILE ILE C . n A 1 114 LYS 114 129 129 LYS LYS C . n A 1 115 VAL 115 130 130 VAL VAL C . n A 1 116 CYS 116 131 131 CYS CYS C . n A 1 117 GLU 117 132 132 GLU GLU C . n A 1 118 PHE 118 133 133 PHE PHE C . n A 1 119 GLN 119 134 134 GLN GLN C . n A 1 120 PHE 120 135 135 PHE PHE C . n A 1 121 CYS 121 136 136 CYS CYS C . n A 1 122 ASN 122 137 137 ASN ASN C . n A 1 123 ASP 123 138 138 ASP ASP C . n A 1 124 PRO 124 139 139 PRO PRO C . n A 1 125 PHE 125 140 140 PHE PHE C . n A 1 126 LEU 126 141 141 LEU LEU C . n A 1 127 ASP 127 142 142 ASP ASP C . n A 1 128 HIS 128 146 ? ? ? C . n A 1 129 LYS 129 147 ? ? ? C . n A 1 130 ASN 130 148 ? ? ? C . n A 1 131 ASN 131 149 ? ? ? C . n A 1 132 LYS 132 150 ? ? ? C . n A 1 133 SER 133 151 ? ? ? C . n A 1 134 TRP 134 152 ? ? ? C . n A 1 135 MET 135 153 153 MET MET C . n A 1 136 GLU 136 154 154 GLU GLU C . n A 1 137 SER 137 155 155 SER SER C . n A 1 138 GLU 138 156 156 GLU GLU C . n A 1 139 PHE 139 157 157 PHE PHE C . n A 1 140 ARG 140 158 158 ARG ARG C . n A 1 141 VAL 141 159 159 VAL VAL C . n A 1 142 TYR 142 160 160 TYR TYR C . n A 1 143 SER 143 161 161 SER SER C . n A 1 144 SER 144 162 162 SER SER C . n A 1 145 ALA 145 163 163 ALA ALA C . n A 1 146 ASN 146 164 164 ASN ASN C . n A 1 147 ASN 147 165 165 ASN ASN C . n A 1 148 CYS 148 166 166 CYS CYS C . n A 1 149 THR 149 167 167 THR THR C . n A 1 150 PHE 150 168 168 PHE PHE C . n A 1 151 GLU 151 169 169 GLU GLU C . n A 1 152 TYR 152 170 170 TYR TYR C . n A 1 153 VAL 153 171 171 VAL VAL C . n A 1 154 SER 154 172 172 SER SER C . n A 1 155 GLN 155 173 173 GLN GLN C . n A 1 156 PRO 156 174 174 PRO PRO C . n A 1 157 PHE 157 175 175 PHE PHE C . n A 1 158 LEU 158 176 176 LEU LEU C . n A 1 159 MET 159 177 ? ? ? C . n A 1 160 ASP 160 178 ? ? ? C . n A 1 161 LEU 161 179 ? ? ? C . n A 1 162 GLU 162 180 ? ? ? C . n A 1 163 GLY 163 181 ? ? ? C . n A 1 164 LYS 164 182 ? ? ? C . n A 1 165 GLN 165 183 ? ? ? C . n A 1 166 GLY 166 184 ? ? ? C . n A 1 167 ASN 167 185 185 ASN ASN C . n A 1 168 PHE 168 186 186 PHE PHE C . n A 1 169 LYS 169 187 187 LYS LYS C . n A 1 170 ASN 170 188 188 ASN ASN C . n A 1 171 LEU 171 189 189 LEU LEU C . n A 1 172 ARG 172 190 190 ARG ARG C . n A 1 173 GLU 173 191 191 GLU GLU C . n A 1 174 PHE 174 192 192 PHE PHE C . n A 1 175 VAL 175 193 193 VAL VAL C . n A 1 176 PHE 176 194 194 PHE PHE C . n A 1 177 LYS 177 195 195 LYS LYS C . n A 1 178 ASN 178 196 196 ASN ASN C . n A 1 179 ILE 179 197 197 ILE ILE C . n A 1 180 ASP 180 198 198 ASP ASP C . n A 1 181 GLY 181 199 199 GLY GLY C . n A 1 182 TYR 182 200 200 TYR TYR C . n A 1 183 PHE 183 201 201 PHE PHE C . n A 1 184 LYS 184 202 202 LYS LYS C . n A 1 185 ILE 185 203 203 ILE ILE C . n A 1 186 TYR 186 204 204 TYR TYR C . n A 1 187 SER 187 205 205 SER SER C . n A 1 188 LYS 188 206 206 LYS LYS C . n A 1 189 HIS 189 207 207 HIS HIS C . n A 1 190 THR 190 208 208 THR THR C . n A 1 191 PRO 191 209 209 PRO PRO C . n A 1 192 ILE 192 210 210 ILE ILE C . n A 1 193 ILE 193 210 ? ? ? C A n A 1 194 VAL 194 210 ? ? ? C B n A 1 195 ARG 195 210 ? ? ? C C n A 1 196 GLU 196 210 ? ? ? C D n A 1 197 PRO 197 210 ? ? ? C E n A 1 198 GLU 198 210 ? ? ? C F n A 1 199 ASP 199 215 215 ASP ASP C . n A 1 200 LEU 200 216 216 LEU LEU C . n A 1 201 PRO 201 217 217 PRO PRO C . n A 1 202 GLN 202 218 218 GLN GLN C . n A 1 203 GLY 203 219 219 GLY GLY C . n A 1 204 PHE 204 220 220 PHE PHE C . n A 1 205 SER 205 221 221 SER SER C . n A 1 206 ALA 206 222 222 ALA ALA C . n A 1 207 LEU 207 223 223 LEU LEU C . n A 1 208 GLU 208 224 224 GLU GLU C . n A 1 209 PRO 209 225 225 PRO PRO C . n A 1 210 LEU 210 226 226 LEU LEU C . n A 1 211 VAL 211 227 227 VAL VAL C . n A 1 212 ASP 212 228 228 ASP ASP C . n A 1 213 LEU 213 229 229 LEU LEU C . n A 1 214 PRO 214 230 230 PRO PRO C . n A 1 215 ILE 215 231 231 ILE ILE C . n A 1 216 GLY 216 232 232 GLY GLY C . n A 1 217 ILE 217 233 233 ILE ILE C . n A 1 218 ASN 218 234 234 ASN ASN C . n A 1 219 ILE 219 235 235 ILE ILE C . n A 1 220 THR 220 236 236 THR THR C . n A 1 221 ARG 221 237 237 ARG ARG C . n A 1 222 PHE 222 238 238 PHE PHE C . n A 1 223 GLN 223 239 239 GLN GLN C . n A 1 224 THR 224 240 240 THR THR C . n A 1 225 LEU 225 241 241 LEU LEU C . n A 1 226 LEU 226 242 242 LEU LEU C . n A 1 227 ALA 227 243 243 ALA ALA C . n A 1 228 LEU 228 244 244 LEU LEU C . n A 1 229 HIS 229 245 245 HIS HIS C . n A 1 230 ARG 230 246 246 ARG ARG C . n A 1 231 SER 231 247 247 SER SER C . n A 1 232 TYR 232 248 ? ? ? C . n A 1 233 LEU 233 249 ? ? ? C . n A 1 234 THR 234 250 ? ? ? C . n A 1 235 PRO 235 251 ? ? ? C . n A 1 236 GLY 236 252 ? ? ? C . n A 1 237 ASP 237 253 ? ? ? C . n A 1 238 SER 238 254 ? ? ? C . n A 1 239 SER 239 255 ? ? ? C . n A 1 240 SER 240 256 ? ? ? C . n A 1 241 GLY 241 257 257 GLY GLY C . n A 1 242 TRP 242 258 258 TRP TRP C . n A 1 243 THR 243 259 259 THR THR C . n A 1 244 ALA 244 260 260 ALA ALA C . n A 1 245 GLY 245 261 261 GLY GLY C . n A 1 246 ALA 246 262 262 ALA ALA C . n A 1 247 ALA 247 263 263 ALA ALA C . n A 1 248 ALA 248 264 264 ALA ALA C . n A 1 249 TYR 249 265 265 TYR TYR C . n A 1 250 TYR 250 266 266 TYR TYR C . n A 1 251 VAL 251 267 267 VAL VAL C . n A 1 252 GLY 252 268 268 GLY GLY C . n A 1 253 TYR 253 269 269 TYR TYR C . n A 1 254 LEU 254 270 270 LEU LEU C . n A 1 255 GLN 255 271 271 GLN GLN C . n A 1 256 PRO 256 272 272 PRO PRO C . n A 1 257 ARG 257 273 273 ARG ARG C . n A 1 258 THR 258 274 274 THR THR C . n A 1 259 PHE 259 275 275 PHE PHE C . n A 1 260 LEU 260 276 276 LEU LEU C . n A 1 261 LEU 261 277 277 LEU LEU C . n A 1 262 LYS 262 278 278 LYS LYS C . n A 1 263 TYR 263 279 279 TYR TYR C . n A 1 264 ASN 264 280 280 ASN ASN C . n A 1 265 GLU 265 281 281 GLU GLU C . n A 1 266 ASN 266 282 282 ASN ASN C . n A 1 267 GLY 267 283 283 GLY GLY C . n A 1 268 THR 268 284 284 THR THR C . n A 1 269 ILE 269 285 285 ILE ILE C . n A 1 270 THR 270 286 286 THR THR C . n A 1 271 ASP 271 287 287 ASP ASP C . n A 1 272 ALA 272 288 288 ALA ALA C . n A 1 273 VAL 273 289 289 VAL VAL C . n A 1 274 ASP 274 290 ? ? ? C . n A 1 275 CYS 275 291 ? ? ? C . n A 1 276 ALA 276 292 ? ? ? C . n A 1 277 LEU 277 293 ? ? ? C . n A 1 278 ASP 278 294 ? ? ? C . n A 1 279 PRO 279 295 ? ? ? C . n A 1 280 LEU 280 296 ? ? ? C . n A 1 281 SER 281 297 ? ? ? C . n A 1 282 GLU 282 298 ? ? ? C . n A 1 283 THR 283 299 ? ? ? C . n A 1 284 LYS 284 300 ? ? ? C . n A 1 285 CYS 285 301 ? ? ? C . n A 1 286 THR 286 302 ? ? ? C . n A 1 287 LEU 287 303 ? ? ? C . n A 1 288 LYS 288 304 ? ? ? C . n A 1 289 SER 289 305 ? ? ? C . n A 1 290 PHE 290 306 ? ? ? C . n A 1 291 THR 291 307 ? ? ? C . n A 1 292 VAL 292 308 ? ? ? C . n A 1 293 GLU 293 309 ? ? ? C . n A 1 294 LYS 294 310 ? ? ? C . n A 1 295 GLY 295 311 ? ? ? C . n A 1 296 ILE 296 312 ? ? ? C . n A 1 297 TYR 297 313 ? ? ? C . n A 1 298 GLN 298 314 ? ? ? C . n A 1 299 THR 299 315 ? ? ? C . n A 1 300 SER 300 316 ? ? ? C . n A 1 301 ASN 301 317 ? ? ? C . n A 1 302 PHE 302 318 ? ? ? C . n A 1 303 ARG 303 319 ? ? ? C . n A 1 304 VAL 304 320 ? ? ? C . n A 1 305 GLN 305 321 ? ? ? C . n A 1 306 PRO 306 322 ? ? ? C . n A 1 307 THR 307 323 ? ? ? C . n A 1 308 GLU 308 324 ? ? ? C . n A 1 309 SER 309 325 ? ? ? C . n A 1 310 ILE 310 326 ? ? ? C . n A 1 311 VAL 311 327 ? ? ? C . n A 1 312 ARG 312 328 ? ? ? C . n A 1 313 PHE 313 329 ? ? ? C . n A 1 314 PRO 314 330 ? ? ? C . n A 1 315 ASN 315 331 ? ? ? C . n A 1 316 ILE 316 332 ? ? ? C . n A 1 317 THR 317 333 ? ? ? C . n A 1 318 ASN 318 334 334 ASN ASN C . n A 1 319 LEU 319 335 335 LEU LEU C . n A 1 320 CYS 320 336 336 CYS CYS C . n A 1 321 PRO 321 337 337 PRO PRO C . n A 1 322 PHE 322 338 338 PHE PHE C . n A 1 323 ASP 323 339 339 ASP ASP C . n A 1 324 GLU 324 340 340 GLU GLU C . n A 1 325 VAL 325 341 341 VAL VAL C . n A 1 326 PHE 326 342 342 PHE PHE C . n A 1 327 ASN 327 343 343 ASN ASN C . n A 1 328 ALA 328 344 344 ALA ALA C . n A 1 329 THR 329 345 345 THR THR C . n A 1 330 ARG 330 346 346 ARG ARG C . n A 1 331 PHE 331 347 347 PHE PHE C . n A 1 332 ALA 332 348 348 ALA ALA C . n A 1 333 SER 333 349 349 SER SER C . n A 1 334 VAL 334 350 350 VAL VAL C . n A 1 335 TYR 335 351 351 TYR TYR C . n A 1 336 ALA 336 352 352 ALA ALA C . n A 1 337 TRP 337 353 353 TRP TRP C . n A 1 338 ASN 338 354 354 ASN ASN C . n A 1 339 ARG 339 355 355 ARG ARG C . n A 1 340 LYS 340 356 356 LYS LYS C . n A 1 341 ARG 341 357 357 ARG ARG C . n A 1 342 ILE 342 358 358 ILE ILE C . n A 1 343 SER 343 359 359 SER SER C . n A 1 344 ASN 344 360 360 ASN ASN C . n A 1 345 CYS 345 361 361 CYS CYS C . n A 1 346 VAL 346 362 362 VAL VAL C . n A 1 347 ALA 347 363 363 ALA ALA C . n A 1 348 ASP 348 364 364 ASP ASP C . n A 1 349 TYR 349 365 365 TYR TYR C . n A 1 350 SER 350 366 366 SER SER C . n A 1 351 VAL 351 367 367 VAL VAL C . n A 1 352 LEU 352 368 368 LEU LEU C . n A 1 353 TYR 353 369 369 TYR TYR C . n A 1 354 ASN 354 370 370 ASN ASN C . n A 1 355 LEU 355 371 371 LEU LEU C . n A 1 356 ALA 356 372 372 ALA ALA C . n A 1 357 PRO 357 373 373 PRO PRO C . n A 1 358 PHE 358 374 374 PHE PHE C . n A 1 359 PHE 359 375 375 PHE PHE C . n A 1 360 THR 360 376 376 THR THR C . n A 1 361 PHE 361 377 377 PHE PHE C . n A 1 362 LYS 362 378 378 LYS LYS C . n A 1 363 CYS 363 379 379 CYS CYS C . n A 1 364 TYR 364 380 380 TYR TYR C . n A 1 365 GLY 365 381 381 GLY GLY C . n A 1 366 VAL 366 382 382 VAL VAL C . n A 1 367 SER 367 383 383 SER SER C . n A 1 368 PRO 368 384 384 PRO PRO C . n A 1 369 THR 369 385 385 THR THR C . n A 1 370 LYS 370 386 386 LYS LYS C . n A 1 371 LEU 371 387 387 LEU LEU C . n A 1 372 ASN 372 388 388 ASN ASN C . n A 1 373 ASP 373 389 389 ASP ASP C . n A 1 374 LEU 374 390 390 LEU LEU C . n A 1 375 CYS 375 391 391 CYS CYS C . n A 1 376 PHE 376 392 392 PHE PHE C . n A 1 377 THR 377 393 393 THR THR C . n A 1 378 ASN 378 394 394 ASN ASN C . n A 1 379 VAL 379 395 395 VAL VAL C . n A 1 380 TYR 380 396 396 TYR TYR C . n A 1 381 ALA 381 397 397 ALA ALA C . n A 1 382 ASP 382 398 398 ASP ASP C . n A 1 383 SER 383 399 399 SER SER C . n A 1 384 PHE 384 400 400 PHE PHE C . n A 1 385 VAL 385 401 401 VAL VAL C . n A 1 386 ILE 386 402 402 ILE ILE C . n A 1 387 ARG 387 403 403 ARG ARG C . n A 1 388 GLY 388 404 404 GLY GLY C . n A 1 389 ASP 389 405 405 ASP ASP C . n A 1 390 GLU 390 406 406 GLU GLU C . n A 1 391 VAL 391 407 407 VAL VAL C . n A 1 392 ARG 392 408 408 ARG ARG C . n A 1 393 GLN 393 409 409 GLN GLN C . n A 1 394 ILE 394 410 410 ILE ILE C . n A 1 395 ALA 395 411 411 ALA ALA C . n A 1 396 PRO 396 412 412 PRO PRO C . n A 1 397 GLY 397 413 413 GLY GLY C . n A 1 398 GLN 398 414 414 GLN GLN C . n A 1 399 THR 399 415 415 THR THR C . n A 1 400 GLY 400 416 416 GLY GLY C . n A 1 401 ASN 401 417 417 ASN ASN C . n A 1 402 ILE 402 418 418 ILE ILE C . n A 1 403 ALA 403 419 419 ALA ALA C . n A 1 404 ASP 404 420 420 ASP ASP C . n A 1 405 TYR 405 421 421 TYR TYR C . n A 1 406 ASN 406 422 422 ASN ASN C . n A 1 407 TYR 407 423 423 TYR TYR C . n A 1 408 LYS 408 424 424 LYS LYS C . n A 1 409 LEU 409 425 425 LEU LEU C . n A 1 410 PRO 410 426 426 PRO PRO C . n A 1 411 ASP 411 427 427 ASP ASP C . n A 1 412 ASP 412 428 428 ASP ASP C . n A 1 413 PHE 413 429 429 PHE PHE C . n A 1 414 THR 414 430 430 THR THR C . n A 1 415 GLY 415 431 431 GLY GLY C . n A 1 416 CYS 416 432 432 CYS CYS C . n A 1 417 VAL 417 433 433 VAL VAL C . n A 1 418 ILE 418 434 434 ILE ILE C . n A 1 419 ALA 419 435 435 ALA ALA C . n A 1 420 TRP 420 436 436 TRP TRP C . n A 1 421 ASN 421 437 437 ASN ASN C . n A 1 422 SER 422 438 438 SER SER C . n A 1 423 ASN 423 439 439 ASN ASN C . n A 1 424 LYS 424 440 440 LYS LYS C . n A 1 425 LEU 425 441 441 LEU LEU C . n A 1 426 ASP 426 442 442 ASP ASP C . n A 1 427 SER 427 443 443 SER SER C . n A 1 428 LYS 428 444 444 LYS LYS C . n A 1 429 VAL 429 445 445 VAL VAL C . n A 1 430 SER 430 446 446 SER SER C . n A 1 431 GLY 431 447 447 GLY GLY C . n A 1 432 ASN 432 448 448 ASN ASN C . n A 1 433 TYR 433 449 449 TYR TYR C . n A 1 434 ASN 434 450 450 ASN ASN C . n A 1 435 TYR 435 451 451 TYR TYR C . n A 1 436 LEU 436 452 452 LEU LEU C . n A 1 437 TYR 437 453 453 TYR TYR C . n A 1 438 ARG 438 454 454 ARG ARG C . n A 1 439 LEU 439 455 455 LEU LEU C . n A 1 440 PHE 440 456 456 PHE PHE C . n A 1 441 ARG 441 457 457 ARG ARG C . n A 1 442 LYS 442 458 458 LYS LYS C . n A 1 443 SER 443 459 459 SER SER C . n A 1 444 ASN 444 460 460 ASN ASN C . n A 1 445 LEU 445 461 461 LEU LEU C . n A 1 446 LYS 446 462 462 LYS LYS C . n A 1 447 PRO 447 463 463 PRO PRO C . n A 1 448 PHE 448 464 464 PHE PHE C . n A 1 449 GLU 449 465 465 GLU GLU C . n A 1 450 ARG 450 466 466 ARG ARG C . n A 1 451 ASP 451 467 467 ASP ASP C . n A 1 452 ILE 452 468 468 ILE ILE C . n A 1 453 SER 453 469 469 SER SER C . n A 1 454 THR 454 470 470 THR THR C . n A 1 455 GLU 455 471 471 GLU GLU C . n A 1 456 ILE 456 472 472 ILE ILE C . n A 1 457 TYR 457 473 473 TYR TYR C . n A 1 458 GLN 458 474 474 GLN GLN C . n A 1 459 ALA 459 475 475 ALA ALA C . n A 1 460 GLY 460 476 476 GLY GLY C . n A 1 461 ASN 461 477 477 ASN ASN C . n A 1 462 LYS 462 478 478 LYS LYS C . n A 1 463 PRO 463 479 479 PRO PRO C . n A 1 464 CYS 464 480 480 CYS CYS C . n A 1 465 ASN 465 481 481 ASN ASN C . n A 1 466 GLY 466 482 482 GLY GLY C . n A 1 467 VAL 467 483 483 VAL VAL C . n A 1 468 ALA 468 484 484 ALA ALA C . n A 1 469 GLY 469 485 485 GLY GLY C . n A 1 470 PHE 470 486 486 PHE PHE C . n A 1 471 ASN 471 487 487 ASN ASN C . n A 1 472 CYS 472 488 488 CYS CYS C . n A 1 473 TYR 473 489 489 TYR TYR C . n A 1 474 PHE 474 490 490 PHE PHE C . n A 1 475 PRO 475 491 491 PRO PRO C . n A 1 476 LEU 476 492 492 LEU LEU C . n A 1 477 ARG 477 493 493 ARG ARG C . n A 1 478 SER 478 494 494 SER SER C . n A 1 479 TYR 479 495 495 TYR TYR C . n A 1 480 SER 480 496 496 SER SER C . n A 1 481 PHE 481 497 497 PHE PHE C . n A 1 482 ARG 482 498 498 ARG ARG C . n A 1 483 PRO 483 499 499 PRO PRO C . n A 1 484 THR 484 500 500 THR THR C . n A 1 485 TYR 485 501 501 TYR TYR C . n A 1 486 GLY 486 502 502 GLY GLY C . n A 1 487 VAL 487 503 503 VAL VAL C . n A 1 488 GLY 488 504 504 GLY GLY C . n A 1 489 HIS 489 505 505 HIS HIS C . n A 1 490 GLN 490 506 506 GLN GLN C . n A 1 491 PRO 491 507 507 PRO PRO C . n A 1 492 TYR 492 508 508 TYR TYR C . n A 1 493 ARG 493 509 509 ARG ARG C . n A 1 494 VAL 494 510 510 VAL VAL C . n A 1 495 VAL 495 511 511 VAL VAL C . n A 1 496 VAL 496 512 512 VAL VAL C . n A 1 497 LEU 497 513 513 LEU LEU C . n A 1 498 SER 498 514 514 SER SER C . n A 1 499 PHE 499 515 515 PHE PHE C . n A 1 500 GLU 500 516 516 GLU GLU C . n A 1 501 LEU 501 517 517 LEU LEU C . n A 1 502 LEU 502 518 518 LEU LEU C . n A 1 503 HIS 503 519 519 HIS HIS C . n A 1 504 ALA 504 520 520 ALA ALA C . n A 1 505 PRO 505 521 521 PRO PRO C . n A 1 506 ALA 506 522 522 ALA ALA C . n A 1 507 THR 507 523 523 THR THR C . n A 1 508 VAL 508 524 524 VAL VAL C . n A 1 509 CYS 509 525 525 CYS CYS C . n A 1 510 GLY 510 526 526 GLY GLY C . n B 2 1 PRO 1 322 322 PRO PRO A . n B 2 2 THR 2 323 323 THR THR A . n B 2 3 GLU 3 324 324 GLU GLU A . n B 2 4 SER 4 325 325 SER SER A . n B 2 5 ILE 5 326 326 ILE ILE A . n B 2 6 VAL 6 327 327 VAL VAL A . n B 2 7 ARG 7 328 328 ARG ARG A . n B 2 8 PHE 8 329 329 PHE PHE A . n B 2 9 PRO 9 330 330 PRO PRO A . n B 2 10 ASN 10 331 331 ASN ASN A . n B 2 11 ILE 11 332 332 ILE ILE A . n B 2 12 THR 12 333 333 THR THR A . n B 2 13 ASN 13 334 334 ASN ASN A . n B 2 14 LEU 14 335 335 LEU LEU A . n B 2 15 CYS 15 336 336 CYS CYS A . n B 2 16 PRO 16 337 337 PRO PRO A . n B 2 17 PHE 17 338 338 PHE PHE A . n B 2 18 ASP 18 339 339 ASP ASP A . n B 2 19 GLU 19 340 340 GLU GLU A . n B 2 20 VAL 20 341 341 VAL VAL A . n B 2 21 PHE 21 342 342 PHE PHE A . n B 2 22 ASN 22 343 343 ASN ASN A . n B 2 23 ALA 23 344 344 ALA ALA A . n B 2 24 THR 24 345 345 THR THR A . n B 2 25 ARG 25 346 346 ARG ARG A . n B 2 26 PHE 26 347 347 PHE PHE A . n B 2 27 ALA 27 348 348 ALA ALA A . n B 2 28 SER 28 349 349 SER SER A . n B 2 29 VAL 29 350 350 VAL VAL A . n B 2 30 TYR 30 351 351 TYR TYR A . n B 2 31 ALA 31 352 352 ALA ALA A . n B 2 32 TRP 32 353 353 TRP TRP A . n B 2 33 ASN 33 354 354 ASN ASN A . n B 2 34 ARG 34 355 355 ARG ARG A . n B 2 35 LYS 35 356 356 LYS LYS A . n B 2 36 ARG 36 357 357 ARG ARG A . n B 2 37 ILE 37 358 358 ILE ILE A . n B 2 38 SER 38 359 359 SER SER A . n B 2 39 ASN 39 360 360 ASN ASN A . n B 2 40 CYS 40 361 361 CYS CYS A . n B 2 41 VAL 41 362 362 VAL VAL A . n B 2 42 ALA 42 363 363 ALA ALA A . n B 2 43 ASP 43 364 364 ASP ASP A . n B 2 44 TYR 44 365 365 TYR TYR A . n B 2 45 SER 45 366 366 SER SER A . n B 2 46 VAL 46 367 367 VAL VAL A . n B 2 47 LEU 47 368 368 LEU LEU A . n B 2 48 TYR 48 369 369 TYR TYR A . n B 2 49 ASN 49 370 370 ASN ASN A . n B 2 50 LEU 50 371 371 LEU LEU A . n B 2 51 ALA 51 372 372 ALA ALA A . n B 2 52 PRO 52 373 373 PRO PRO A . n B 2 53 PHE 53 374 374 PHE PHE A . n B 2 54 PHE 54 375 375 PHE PHE A . n B 2 55 THR 55 376 376 THR THR A . n B 2 56 PHE 56 377 377 PHE PHE A . n B 2 57 LYS 57 378 378 LYS LYS A . n B 2 58 CYS 58 379 379 CYS CYS A . n B 2 59 TYR 59 380 380 TYR TYR A . n B 2 60 GLY 60 381 381 GLY GLY A . n B 2 61 VAL 61 382 382 VAL VAL A . n B 2 62 SER 62 383 383 SER SER A . n B 2 63 PRO 63 384 384 PRO PRO A . n B 2 64 THR 64 385 385 THR THR A . n B 2 65 LYS 65 386 386 LYS LYS A . n B 2 66 LEU 66 387 387 LEU LEU A . n B 2 67 ASN 67 388 388 ASN ASN A . n B 2 68 ASP 68 389 389 ASP ASP A . n B 2 69 LEU 69 390 390 LEU LEU A . n B 2 70 CYS 70 391 391 CYS CYS A . n B 2 71 PHE 71 392 392 PHE PHE A . n B 2 72 THR 72 393 393 THR THR A . n B 2 73 ASN 73 394 394 ASN ASN A . n B 2 74 VAL 74 395 395 VAL VAL A . n B 2 75 TYR 75 396 396 TYR TYR A . n B 2 76 ALA 76 397 397 ALA ALA A . n B 2 77 ASP 77 398 398 ASP ASP A . n B 2 78 SER 78 399 399 SER SER A . n B 2 79 PHE 79 400 400 PHE PHE A . n B 2 80 VAL 80 401 401 VAL VAL A . n B 2 81 ILE 81 402 402 ILE ILE A . n B 2 82 ARG 82 403 403 ARG ARG A . n B 2 83 GLY 83 404 404 GLY GLY A . n B 2 84 ASP 84 405 405 ASP ASP A . n B 2 85 GLU 85 406 406 GLU GLU A . n B 2 86 VAL 86 407 407 VAL VAL A . n B 2 87 ARG 87 408 408 ARG ARG A . n B 2 88 GLN 88 409 409 GLN GLN A . n B 2 89 ILE 89 410 410 ILE ILE A . n B 2 90 ALA 90 411 411 ALA ALA A . n B 2 91 PRO 91 412 412 PRO PRO A . n B 2 92 GLY 92 413 413 GLY GLY A . n B 2 93 GLN 93 414 414 GLN GLN A . n B 2 94 THR 94 415 415 THR THR A . n B 2 95 GLY 95 416 416 GLY GLY A . n B 2 96 ASN 96 417 417 ASN ASN A . n B 2 97 ILE 97 418 418 ILE ILE A . n B 2 98 ALA 98 419 419 ALA ALA A . n B 2 99 ASP 99 420 420 ASP ASP A . n B 2 100 TYR 100 421 421 TYR TYR A . n B 2 101 ASN 101 422 422 ASN ASN A . n B 2 102 TYR 102 423 423 TYR TYR A . n B 2 103 LYS 103 424 424 LYS LYS A . n B 2 104 LEU 104 425 425 LEU LEU A . n B 2 105 PRO 105 426 426 PRO PRO A . n B 2 106 ASP 106 427 427 ASP ASP A . n B 2 107 ASP 107 428 428 ASP ASP A . n B 2 108 PHE 108 429 429 PHE PHE A . n B 2 109 THR 109 430 430 THR THR A . n B 2 110 GLY 110 431 431 GLY GLY A . n B 2 111 CYS 111 432 432 CYS CYS A . n B 2 112 VAL 112 433 433 VAL VAL A . n B 2 113 ILE 113 434 434 ILE ILE A . n B 2 114 ALA 114 435 435 ALA ALA A . n B 2 115 TRP 115 436 436 TRP TRP A . n B 2 116 ASN 116 437 437 ASN ASN A . n B 2 117 SER 117 438 438 SER SER A . n B 2 118 ASN 118 439 439 ASN ASN A . n B 2 119 LYS 119 440 440 LYS LYS A . n B 2 120 LEU 120 441 441 LEU LEU A . n B 2 121 ASP 121 442 442 ASP ASP A . n B 2 122 SER 122 443 443 SER SER A . n B 2 123 LYS 123 444 444 LYS LYS A . n B 2 124 VAL 124 445 445 VAL VAL A . n B 2 125 SER 125 446 446 SER SER A . n B 2 126 GLY 126 447 447 GLY GLY A . n B 2 127 ASN 127 448 448 ASN ASN A . n B 2 128 TYR 128 449 449 TYR TYR A . n B 2 129 ASN 129 450 450 ASN ASN A . n B 2 130 TYR 130 451 451 TYR TYR A . n B 2 131 LEU 131 452 452 LEU LEU A . n B 2 132 TYR 132 453 453 TYR TYR A . n B 2 133 ARG 133 454 454 ARG ARG A . n B 2 134 LEU 134 455 455 LEU LEU A . n B 2 135 PHE 135 456 456 PHE PHE A . n B 2 136 ARG 136 457 457 ARG ARG A . n B 2 137 LYS 137 458 458 LYS LYS A . n B 2 138 SER 138 459 459 SER SER A . n B 2 139 ASN 139 460 460 ASN ASN A . n B 2 140 LEU 140 461 461 LEU LEU A . n B 2 141 LYS 141 462 462 LYS LYS A . n B 2 142 PRO 142 463 463 PRO PRO A . n B 2 143 PHE 143 464 464 PHE PHE A . n B 2 144 GLU 144 465 465 GLU GLU A . n B 2 145 ARG 145 466 466 ARG ARG A . n B 2 146 ASP 146 467 467 ASP ASP A . n B 2 147 ILE 147 468 468 ILE ILE A . n B 2 148 SER 148 469 469 SER SER A . n B 2 149 THR 149 470 470 THR THR A . n B 2 150 GLU 150 471 471 GLU GLU A . n B 2 151 ILE 151 472 472 ILE ILE A . n B 2 152 TYR 152 473 473 TYR TYR A . n B 2 153 GLN 153 474 474 GLN GLN A . n B 2 154 ALA 154 475 475 ALA ALA A . n B 2 155 GLY 155 476 476 GLY GLY A . n B 2 156 ASN 156 477 477 ASN ASN A . n B 2 157 LYS 157 478 478 LYS LYS A . n B 2 158 PRO 158 479 479 PRO PRO A . n B 2 159 CYS 159 480 480 CYS CYS A . n B 2 160 ASN 160 481 481 ASN ASN A . n B 2 161 GLY 161 482 482 GLY GLY A . n B 2 162 VAL 162 483 483 VAL VAL A . n B 2 163 ALA 163 484 484 ALA ALA A . n B 2 164 GLY 164 485 485 GLY GLY A . n B 2 165 PHE 165 486 486 PHE PHE A . n B 2 166 ASN 166 487 487 ASN ASN A . n B 2 167 CYS 167 488 488 CYS CYS A . n B 2 168 TYR 168 489 489 TYR TYR A . n B 2 169 PHE 169 490 490 PHE PHE A . n B 2 170 PRO 170 491 491 PRO PRO A . n B 2 171 LEU 171 492 492 LEU LEU A . n B 2 172 ARG 172 493 493 ARG ARG A . n B 2 173 SER 173 494 494 SER SER A . n B 2 174 TYR 174 495 495 TYR TYR A . n B 2 175 SER 175 496 496 SER SER A . n B 2 176 PHE 176 497 497 PHE PHE A . n B 2 177 ARG 177 498 498 ARG ARG A . n B 2 178 PRO 178 499 499 PRO PRO A . n B 2 179 THR 179 500 500 THR THR A . n B 2 180 TYR 180 501 501 TYR TYR A . n B 2 181 GLY 181 502 502 GLY GLY A . n B 2 182 VAL 182 503 503 VAL VAL A . n B 2 183 GLY 183 504 504 GLY GLY A . n B 2 184 HIS 184 505 505 HIS HIS A . n B 2 185 GLN 185 506 506 GLN GLN A . n B 2 186 PRO 186 507 507 PRO PRO A . n B 2 187 TYR 187 508 508 TYR TYR A . n B 2 188 ARG 188 509 509 ARG ARG A . n B 2 189 VAL 189 510 510 VAL VAL A . n B 2 190 VAL 190 511 511 VAL VAL A . n B 2 191 VAL 191 512 512 VAL VAL A . n B 2 192 LEU 192 513 513 LEU LEU A . n B 2 193 SER 193 514 514 SER SER A . n B 2 194 PHE 194 515 515 PHE PHE A . n B 2 195 GLU 195 516 516 GLU GLU A . n B 2 196 LEU 196 517 517 LEU LEU A . n B 2 197 LEU 197 518 518 LEU LEU A . n B 2 198 HIS 198 519 519 HIS HIS A . n B 2 199 ALA 199 520 520 ALA ALA A . n B 2 200 PRO 200 521 521 PRO PRO A . n B 2 201 ALA 201 522 522 ALA ALA A . n B 2 202 THR 202 523 523 THR THR A . n B 2 203 VAL 203 524 524 VAL VAL A . n B 2 204 CYS 204 525 525 CYS CYS A . n B 2 205 GLY 205 526 526 GLY GLY A . n B 2 206 PRO 206 527 527 PRO PRO A . n B 2 207 LYS 207 528 528 LYS LYS A . n B 2 208 LYS 208 529 529 LYS LYS A . n B 2 209 SER 209 530 530 SER SER A . n B 2 210 THR 210 531 531 THR THR A . n B 2 211 ASN 211 532 532 ASN ASN A . n B 2 212 LEU 212 533 533 LEU LEU A . n B 2 213 VAL 213 534 534 VAL VAL A . n B 2 214 LYS 214 535 535 LYS LYS A . n B 2 215 ASN 215 536 536 ASN ASN A . n B 2 216 LYS 216 537 537 LYS LYS A . n B 2 217 CYS 217 538 538 CYS CYS A . n B 2 218 VAL 218 539 539 VAL VAL A . n B 2 219 ASN 219 540 540 ASN ASN A . n B 2 220 PHE 220 541 541 PHE PHE A . n B 2 221 ASN 221 542 542 ASN ASN A . n B 2 222 PHE 222 543 543 PHE PHE A . n B 2 223 ASN 223 544 544 ASN ASN A . n B 2 224 GLY 224 545 545 GLY GLY A . n B 2 225 LEU 225 546 546 LEU LEU A . n B 2 226 LYS 226 547 547 LYS LYS A . n B 2 227 GLY 227 548 548 GLY GLY A . n B 2 228 THR 228 549 549 THR THR A . n B 2 229 GLY 229 550 550 GLY GLY A . n B 2 230 VAL 230 551 551 VAL VAL A . n B 2 231 LEU 231 552 552 LEU LEU A . n B 2 232 THR 232 553 553 THR THR A . n B 2 233 GLU 233 554 554 GLU GLU A . n B 2 234 SER 234 555 555 SER SER A . n B 2 235 ASN 235 556 556 ASN ASN A . n B 2 236 LYS 236 557 557 LYS LYS A . n B 2 237 LYS 237 558 558 LYS LYS A . n B 2 238 PHE 238 559 559 PHE PHE A . n B 2 239 LEU 239 560 560 LEU LEU A . n B 2 240 PRO 240 561 561 PRO PRO A . n B 2 241 PHE 241 562 562 PHE PHE A . n B 2 242 GLN 242 563 563 GLN GLN A . n B 2 243 GLN 243 564 564 GLN GLN A . n B 2 244 PHE 244 565 565 PHE PHE A . n B 2 245 GLY 245 566 566 GLY GLY A . n B 2 246 ARG 246 567 567 ARG ARG A . n B 2 247 ASP 247 568 568 ASP ASP A . n B 2 248 ILE 248 569 569 ILE ILE A . n B 2 249 ALA 249 570 570 ALA ALA A . n B 2 250 ASP 250 571 571 ASP ASP A . n B 2 251 THR 251 572 572 THR THR A . n B 2 252 THR 252 573 573 THR THR A . n B 2 253 ASP 253 574 574 ASP ASP A . n B 2 254 ALA 254 575 575 ALA ALA A . n B 2 255 VAL 255 576 576 VAL VAL A . n B 2 256 ARG 256 577 577 ARG ARG A . n B 2 257 ASP 257 578 578 ASP ASP A . n B 2 258 PRO 258 579 579 PRO PRO A . n B 2 259 GLN 259 580 580 GLN GLN A . n B 2 260 THR 260 581 581 THR THR A . n B 2 261 LEU 261 582 582 LEU LEU A . n B 2 262 GLU 262 583 583 GLU GLU A . n B 2 263 ILE 263 584 584 ILE ILE A . n B 2 264 LEU 264 585 585 LEU LEU A . n B 2 265 ASP 265 586 586 ASP ASP A . n B 2 266 ILE 266 587 587 ILE ILE A . n B 2 267 THR 267 588 588 THR THR A . n C 3 1 GLU 1 1 1 GLU GLU H . n C 3 2 VAL 2 2 2 VAL VAL H . n C 3 3 GLN 3 3 3 GLN GLN H . n C 3 4 LEU 4 4 4 LEU LEU H . n C 3 5 VAL 5 5 5 VAL VAL H . n C 3 6 GLU 6 6 6 GLU GLU H . n C 3 7 SER 7 7 7 SER SER H . n C 3 8 GLY 8 8 8 GLY GLY H . n C 3 9 GLY 9 9 9 GLY GLY H . n C 3 10 GLY 10 10 10 GLY GLY H . n C 3 11 LEU 11 11 11 LEU LEU H . n C 3 12 ILE 12 12 12 ILE ILE H . n C 3 13 GLN 13 13 13 GLN GLN H . n C 3 14 PRO 14 14 14 PRO PRO H . n C 3 15 GLY 15 15 15 GLY GLY H . n C 3 16 GLY 16 16 16 GLY GLY H . n C 3 17 SER 17 17 17 SER SER H . n C 3 18 LEU 18 18 18 LEU LEU H . n C 3 19 ARG 19 19 19 ARG ARG H . n C 3 20 LEU 20 20 20 LEU LEU H . n C 3 21 SER 21 21 21 SER SER H . n C 3 22 CYS 22 22 22 CYS CYS H . n C 3 23 ALA 23 23 23 ALA ALA H . n C 3 24 ALA 24 24 24 ALA ALA H . n C 3 25 SER 25 25 25 SER SER H . n C 3 26 GLY 26 26 26 GLY GLY H . n C 3 27 LEU 27 27 27 LEU LEU H . n C 3 28 THR 28 28 28 THR THR H . n C 3 29 VAL 29 29 29 VAL VAL H . n C 3 30 SER 30 30 30 SER SER H . n C 3 31 SER 31 31 31 SER SER H . n C 3 32 ASN 32 32 32 ASN ASN H . n C 3 33 TYR 33 33 33 TYR TYR H . n C 3 34 MET 34 34 34 MET MET H . n C 3 35 HIS 35 35 35 HIS HIS H . n C 3 36 TRP 36 36 36 TRP TRP H . n C 3 37 VAL 37 37 37 VAL VAL H . n C 3 38 ARG 38 38 38 ARG ARG H . n C 3 39 GLN 39 39 39 GLN GLN H . n C 3 40 ALA 40 40 40 ALA ALA H . n C 3 41 PRO 41 41 41 PRO PRO H . n C 3 42 GLY 42 42 42 GLY GLY H . n C 3 43 LYS 43 43 43 LYS LYS H . n C 3 44 GLY 44 44 44 GLY GLY H . n C 3 45 LEU 45 45 45 LEU LEU H . n C 3 46 GLU 46 46 46 GLU GLU H . n C 3 47 TRP 47 47 47 TRP TRP H . n C 3 48 VAL 48 48 48 VAL VAL H . n C 3 49 SER 49 49 49 SER SER H . n C 3 50 VAL 50 50 50 VAL VAL H . n C 3 51 LEU 51 51 51 LEU LEU H . n C 3 52 TYR 52 52 52 TYR TYR H . n C 3 53 ALA 53 53 53 ALA ALA H . n C 3 54 GLY 54 54 54 GLY GLY H . n C 3 55 GLY 55 55 55 GLY GLY H . n C 3 56 SER 56 56 56 SER SER H . n C 3 57 ALA 57 57 57 ALA ALA H . n C 3 58 PHE 58 58 58 PHE PHE H . n C 3 59 TYR 59 59 59 TYR TYR H . n C 3 60 ALA 60 60 60 ALA ALA H . n C 3 61 ASP 61 61 61 ASP ASP H . n C 3 62 SER 62 62 62 SER SER H . n C 3 63 VAL 63 63 63 VAL VAL H . n C 3 64 LYS 64 64 64 LYS LYS H . n C 3 65 GLY 65 65 65 GLY GLY H . n C 3 66 ARG 66 66 66 ARG ARG H . n C 3 67 PHE 67 67 67 PHE PHE H . n C 3 68 THR 68 68 68 THR THR H . n C 3 69 ILE 69 69 69 ILE ILE H . n C 3 70 SER 70 70 70 SER SER H . n C 3 71 ARG 71 71 71 ARG ARG H . n C 3 72 ASN 72 72 72 ASN ASN H . n C 3 73 ASN 73 73 73 ASN ASN H . n C 3 74 SER 74 74 74 SER SER H . n C 3 75 LYS 75 75 75 LYS LYS H . n C 3 76 ASN 76 76 76 ASN ASN H . n C 3 77 THR 77 77 77 THR THR H . n C 3 78 LEU 78 78 78 LEU LEU H . n C 3 79 TYR 79 79 79 TYR TYR H . n C 3 80 LEU 80 80 80 LEU LEU H . n C 3 81 GLN 81 81 81 GLN GLN H . n C 3 82 MET 82 82 82 MET MET H . n C 3 83 ASN 83 83 83 ASN ASN H . n C 3 84 SER 84 84 84 SER SER H . n C 3 85 LEU 85 85 85 LEU LEU H . n C 3 86 ARG 86 86 86 ARG ARG H . n C 3 87 ALA 87 87 87 ALA ALA H . n C 3 88 GLU 88 88 88 GLU GLU H . n C 3 89 ASP 89 89 89 ASP ASP H . n C 3 90 THR 90 90 90 THR THR H . n C 3 91 ALA 91 91 91 ALA ALA H . n C 3 92 ILE 92 92 92 ILE ILE H . n C 3 93 TYR 93 93 93 TYR TYR H . n C 3 94 TYR 94 94 94 TYR TYR H . n C 3 95 CYS 95 95 95 CYS CYS H . n C 3 96 ALA 96 96 96 ALA ALA H . n C 3 97 ARG 97 97 97 ARG ARG H . n C 3 98 GLY 98 98 98 GLY GLY H . n C 3 99 LEU 99 99 99 LEU LEU H . n C 3 100 GLY 100 100 100 GLY GLY H . n C 3 101 ASP 101 101 101 ASP ASP H . n C 3 102 TYR 102 102 102 TYR TYR H . n C 3 103 LEU 103 103 103 LEU LEU H . n C 3 104 ASP 104 104 104 ASP ASP H . n C 3 105 SER 105 105 105 SER SER H . n C 3 106 TRP 106 106 106 TRP TRP H . n C 3 107 GLY 107 107 107 GLY GLY H . n C 3 108 GLN 108 108 108 GLN GLN H . n C 3 109 GLY 109 109 109 GLY GLY H . n C 3 110 THR 110 110 110 THR THR H . n C 3 111 LEU 111 111 111 LEU LEU H . n C 3 112 VAL 112 112 112 VAL VAL H . n C 3 113 THR 113 113 113 THR THR H . n C 3 114 VAL 114 114 114 VAL VAL H . n C 3 115 SER 115 115 115 SER SER H . n D 4 1 ASP 1 1 1 ASP ASP L . n D 4 2 ILE 2 2 2 ILE ILE L . n D 4 3 GLN 3 3 3 GLN GLN L . n D 4 4 MET 4 4 4 MET MET L . n D 4 5 THR 5 5 5 THR THR L . n D 4 6 GLN 6 6 6 GLN GLN L . n D 4 7 SER 7 7 7 SER SER L . n D 4 8 PRO 8 8 8 PRO PRO L . n D 4 9 SER 9 9 9 SER SER L . n D 4 10 SER 10 10 10 SER SER L . n D 4 11 VAL 11 11 11 VAL VAL L . n D 4 12 SER 12 12 12 SER SER L . n D 4 13 ALA 13 13 13 ALA ALA L . n D 4 14 SER 14 14 14 SER SER L . n D 4 15 VAL 15 15 15 VAL VAL L . n D 4 16 GLY 16 16 16 GLY GLY L . n D 4 17 ASP 17 17 17 ASP ASP L . n D 4 18 ARG 18 18 18 ARG ARG L . n D 4 19 VAL 19 19 19 VAL VAL L . n D 4 20 THR 20 20 20 THR THR L . n D 4 21 ILE 21 21 21 ILE ILE L . n D 4 22 THR 22 22 22 THR THR L . n D 4 23 CYS 23 23 23 CYS CYS L . n D 4 24 ARG 24 24 24 ARG ARG L . n D 4 25 ALA 25 25 25 ALA ALA L . n D 4 26 SER 26 26 26 SER SER L . n D 4 27 GLN 27 27 27 GLN GLN L . n D 4 28 GLY 28 28 28 GLY GLY L . n D 4 29 ILE 29 29 29 ILE ILE L . n D 4 30 GLY 30 30 30 GLY GLY L . n D 4 31 SER 31 31 31 SER SER L . n D 4 32 TRP 32 32 32 TRP TRP L . n D 4 33 LEU 33 33 33 LEU LEU L . n D 4 34 ALA 34 34 34 ALA ALA L . n D 4 35 TRP 35 35 35 TRP TRP L . n D 4 36 TYR 36 36 36 TYR TYR L . n D 4 37 GLN 37 37 37 GLN GLN L . n D 4 38 GLN 38 38 38 GLN GLN L . n D 4 39 LYS 39 39 39 LYS LYS L . n D 4 40 PRO 40 40 40 PRO PRO L . n D 4 41 GLY 41 41 41 GLY GLY L . n D 4 42 LYS 42 42 42 LYS LYS L . n D 4 43 ALA 43 43 43 ALA ALA L . n D 4 44 PRO 44 44 44 PRO PRO L . n D 4 45 GLN 45 45 45 GLN GLN L . n D 4 46 LEU 46 46 46 LEU LEU L . n D 4 47 LEU 47 47 47 LEU LEU L . n D 4 48 ILE 48 48 48 ILE ILE L . n D 4 49 TYR 49 49 49 TYR TYR L . n D 4 50 ALA 50 50 50 ALA ALA L . n D 4 51 ALA 51 51 51 ALA ALA L . n D 4 52 SER 52 52 52 SER SER L . n D 4 53 THR 53 53 53 THR THR L . n D 4 54 LEU 54 54 54 LEU LEU L . n D 4 55 GLN 55 55 55 GLN GLN L . n D 4 56 SER 56 56 56 SER SER L . n D 4 57 GLY 57 57 57 GLY GLY L . n D 4 58 VAL 58 58 58 VAL VAL L . n D 4 59 PRO 59 59 59 PRO PRO L . n D 4 60 PRO 60 60 60 PRO PRO L . n D 4 61 ARG 61 61 61 ARG ARG L . n D 4 62 PHE 62 62 62 PHE PHE L . n D 4 63 SER 63 63 63 SER SER L . n D 4 64 GLY 64 64 64 GLY GLY L . n D 4 65 SER 65 65 65 SER SER L . n D 4 66 GLY 66 66 66 GLY GLY L . n D 4 67 SER 67 67 67 SER SER L . n D 4 68 GLY 68 68 68 GLY GLY L . n D 4 69 THR 69 69 69 THR THR L . n D 4 70 ASP 70 70 70 ASP ASP L . n D 4 71 PHE 71 71 71 PHE PHE L . n D 4 72 THR 72 72 72 THR THR L . n D 4 73 LEU 73 73 73 LEU LEU L . n D 4 74 THR 74 74 74 THR THR L . n D 4 75 ILE 75 75 75 ILE ILE L . n D 4 76 THR 76 76 76 THR THR L . n D 4 77 SER 77 77 77 SER SER L . n D 4 78 LEU 78 78 78 LEU LEU L . n D 4 79 GLN 79 79 79 GLN GLN L . n D 4 80 PRO 80 80 80 PRO PRO L . n D 4 81 GLU 81 81 81 GLU GLU L . n D 4 82 ASP 82 82 82 ASP ASP L . n D 4 83 PHE 83 83 83 PHE PHE L . n D 4 84 ALA 84 84 84 ALA ALA L . n D 4 85 SER 85 85 85 SER SER L . n D 4 86 TYR 86 86 86 TYR TYR L . n D 4 87 TYR 87 87 87 TYR TYR L . n D 4 88 CYS 88 88 88 CYS CYS L . n D 4 89 GLN 89 89 89 GLN GLN L . n D 4 90 GLN 90 90 90 GLN GLN L . n D 4 91 ALA 91 91 91 ALA ALA L . n D 4 92 ASN 92 92 92 ASN ASN L . n D 4 93 SER 93 93 93 SER SER L . n D 4 94 VAL 94 94 94 VAL VAL L . n D 4 95 LEU 95 95 95 LEU LEU L . n D 4 96 ALA 96 96 96 ALA ALA L . n D 4 97 LEU 97 97 97 LEU LEU L . n D 4 98 THR 98 98 98 THR THR L . n D 4 99 PHE 99 99 99 PHE PHE L . n D 4 100 GLY 100 100 100 GLY GLY L . n D 4 101 GLY 101 101 101 GLY GLY L . n D 4 102 GLY 102 102 102 GLY GLY L . n D 4 103 THR 103 103 103 THR THR L . n D 4 104 LYS 104 104 104 LYS LYS L . n D 4 105 VAL 105 105 105 VAL VAL L . n D 4 106 GLU 106 106 106 GLU GLU L . n D 4 107 ILE 107 107 107 ILE ILE L . n # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 4 he_jun@gibh.ac.cn Jun He ? 'principal investigator/group leader' 0000-0003-0270-9729 5 xiong_xiaoli@gibh.ac.cn Xiaoli Xiong ? 'principal investigator/group leader' 0000-0002-4632-9122 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 NAG 1 1301 1301 NAG NAG C . F 5 NAG 1 1302 1302 NAG NAG C . G 5 NAG 1 1303 1303 NAG NAG C . H 5 NAG 1 1304 1304 NAG NAG C . I 5 NAG 1 1305 1305 NAG NAG C . J 5 NAG 1 1306 1307 NAG NAG C . K 5 NAG 1 601 1307 NAG NAG A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-01-25 2 'Structure model' 1 1 2023-05-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 2 'Structure model' '_citation_author.identifier_ORCID' # _software.citation_id ? _software.classification refinement _software.compiler_name ? _software.compiler_version ? _software.contact_author ? _software.contact_author_email ? _software.date ? _software.description ? _software.dependencies ? _software.hardware ? _software.language ? _software.location ? _software.mods ? _software.name PHENIX _software.os ? _software.os_version ? _software.type ? _software.version 1.20.1_4487: _software.pdbx_ordinal 1 # _pdbx_entry_details.entry_id 8HC7 _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8HC7 _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 8HC7 _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 4.54 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 287435 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 8.0 # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.name _em_entity_assembly.details _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details _em_entity_assembly.entity_id_list 1 0 RECOMBINANT COMPLEX 'SARS-CoV-2 Omicron BA.1 spike trimer with in complex with YB9-258 Fab, focused refinement of 2 RBD region' ? ? ? '1, 2, 3, 4' 2 1 RECOMBINANT COMPLEX 'SARS-CoV_2 Omicron BA.1 spike protein' ? ? ? 1,2 3 1 RECOMBINANT COMPLEX 'YB9-258 Fab' ? ? ? 3,4 # _em_imaging.entry_id 8HC7 _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TALOS ARCTICA' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 200 _em_imaging.illumination_mode OTHER _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 2500 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_vitrification.entry_id 8HC7 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 295 _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8HC7 _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU C 132 ? ? -94.85 59.45 2 1 CYS C 136 ? ? -77.43 -169.45 3 1 CYS C 361 ? ? -160.69 -168.49 4 1 ASP C 428 ? ? -98.65 35.14 5 1 HIS C 505 ? ? -92.22 54.42 6 1 LEU A 371 ? ? -79.08 -165.18 7 1 PHE A 486 ? ? -130.71 -30.49 8 1 GLN A 580 ? ? 61.90 -66.42 9 1 VAL H 48 ? ? -122.83 -65.71 10 1 ASP H 101 ? ? 67.41 -0.62 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 C SER 71 ? A SER 56 2 1 Y 1 C GLY 72 ? A GLY 57 3 1 Y 1 C THR 73 ? A THR 58 4 1 Y 1 C ASN 74 ? A ASN 59 5 1 Y 1 C GLY 75 ? A GLY 60 6 1 Y 1 C THR 76 ? A THR 61 7 1 Y 1 C HIS 146 ? A HIS 128 8 1 Y 1 C LYS 147 ? A LYS 129 9 1 Y 1 C ASN 148 ? A ASN 130 10 1 Y 1 C ASN 149 ? A ASN 131 11 1 Y 1 C LYS 150 ? A LYS 132 12 1 Y 1 C SER 151 ? A SER 133 13 1 Y 1 C TRP 152 ? A TRP 134 14 1 Y 1 C MET 177 ? A MET 159 15 1 Y 1 C ASP 178 ? A ASP 160 16 1 Y 1 C LEU 179 ? A LEU 161 17 1 Y 1 C GLU 180 ? A GLU 162 18 1 Y 1 C GLY 181 ? A GLY 163 19 1 Y 1 C LYS 182 ? A LYS 164 20 1 Y 1 C GLN 183 ? A GLN 165 21 1 Y 1 C GLY 184 ? A GLY 166 22 1 Y 1 C ILE 210 A A ILE 193 23 1 Y 1 C VAL 210 B A VAL 194 24 1 Y 1 C ARG 210 C A ARG 195 25 1 Y 1 C GLU 210 D A GLU 196 26 1 Y 1 C PRO 210 E A PRO 197 27 1 Y 1 C GLU 210 F A GLU 198 28 1 Y 1 C TYR 248 ? A TYR 232 29 1 Y 1 C LEU 249 ? A LEU 233 30 1 Y 1 C THR 250 ? A THR 234 31 1 Y 1 C PRO 251 ? A PRO 235 32 1 Y 1 C GLY 252 ? A GLY 236 33 1 Y 1 C ASP 253 ? A ASP 237 34 1 Y 1 C SER 254 ? A SER 238 35 1 Y 1 C SER 255 ? A SER 239 36 1 Y 1 C SER 256 ? A SER 240 37 1 Y 1 C ASP 290 ? A ASP 274 38 1 Y 1 C CYS 291 ? A CYS 275 39 1 Y 1 C ALA 292 ? A ALA 276 40 1 Y 1 C LEU 293 ? A LEU 277 41 1 Y 1 C ASP 294 ? A ASP 278 42 1 Y 1 C PRO 295 ? A PRO 279 43 1 Y 1 C LEU 296 ? A LEU 280 44 1 Y 1 C SER 297 ? A SER 281 45 1 Y 1 C GLU 298 ? A GLU 282 46 1 Y 1 C THR 299 ? A THR 283 47 1 Y 1 C LYS 300 ? A LYS 284 48 1 Y 1 C CYS 301 ? A CYS 285 49 1 Y 1 C THR 302 ? A THR 286 50 1 Y 1 C LEU 303 ? A LEU 287 51 1 Y 1 C LYS 304 ? A LYS 288 52 1 Y 1 C SER 305 ? A SER 289 53 1 Y 1 C PHE 306 ? A PHE 290 54 1 Y 1 C THR 307 ? A THR 291 55 1 Y 1 C VAL 308 ? A VAL 292 56 1 Y 1 C GLU 309 ? A GLU 293 57 1 Y 1 C LYS 310 ? A LYS 294 58 1 Y 1 C GLY 311 ? A GLY 295 59 1 Y 1 C ILE 312 ? A ILE 296 60 1 Y 1 C TYR 313 ? A TYR 297 61 1 Y 1 C GLN 314 ? A GLN 298 62 1 Y 1 C THR 315 ? A THR 299 63 1 Y 1 C SER 316 ? A SER 300 64 1 Y 1 C ASN 317 ? A ASN 301 65 1 Y 1 C PHE 318 ? A PHE 302 66 1 Y 1 C ARG 319 ? A ARG 303 67 1 Y 1 C VAL 320 ? A VAL 304 68 1 Y 1 C GLN 321 ? A GLN 305 69 1 Y 1 C PRO 322 ? A PRO 306 70 1 Y 1 C THR 323 ? A THR 307 71 1 Y 1 C GLU 324 ? A GLU 308 72 1 Y 1 C SER 325 ? A SER 309 73 1 Y 1 C ILE 326 ? A ILE 310 74 1 Y 1 C VAL 327 ? A VAL 311 75 1 Y 1 C ARG 328 ? A ARG 312 76 1 Y 1 C PHE 329 ? A PHE 313 77 1 Y 1 C PRO 330 ? A PRO 314 78 1 Y 1 C ASN 331 ? A ASN 315 79 1 Y 1 C ILE 332 ? A ILE 316 80 1 Y 1 C THR 333 ? A THR 317 # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # loop_ _em_entity_assembly_naturalsource.cell _em_entity_assembly_naturalsource.cellular_location _em_entity_assembly_naturalsource.entity_assembly_id _em_entity_assembly_naturalsource.id _em_entity_assembly_naturalsource.ncbi_tax_id _em_entity_assembly_naturalsource.organism _em_entity_assembly_naturalsource.organelle _em_entity_assembly_naturalsource.organ _em_entity_assembly_naturalsource.strain _em_entity_assembly_naturalsource.tissue ? ? 2 1 2697049 'Severe acute respiratory syndrome coronavirus 2' ? ? ? ? ? ? 3 2 9606 'Homo sapiens' ? ? ? ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 9606 _em_entity_assembly_recombinant.organism 'Homo sapiens' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 60 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? RELION 4.0 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? cryoSPARC ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? cryoSPARC ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Other government' ? EKPG21-06 1 'Other government' ? 2021A1515011289 2 'Other government' ? GRMH-GL 3 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id NAG _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id NAG _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_entity_nonpoly.entity_id 5 _pdbx_entity_nonpoly.name 2-acetamido-2-deoxy-beta-D-glucopyranose _pdbx_entity_nonpoly.comp_id NAG # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #