HEADER TRANSFERASE 21-DEC-22 8HTC TITLE CRYSTAL STRUCTURE OF A SEMET-LABELED EFFECTOR FROM CHROMOBACTERIUM TITLE 2 VIOLACEUM IN COMPLEX WITH UBIQUITIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: NAD(+)--PROTEIN-THREONINE ADP-RIBOSYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ADENOSINE DIPHOSPHATE-RIBOSYLTRANSFERASE,ADP- COMPND 5 RIBOSYLTRANSFERASE,TYPE III EFFECTOR CTEC; COMPND 6 EC: 2.4.2.-; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: UBIQUITIN-40S RIBOSOMAL PROTEIN S27A (FRAGMENT); COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHROMOBACTERIUM VIOLACEUM ATCC 12472; SOURCE 3 ORGANISM_TAXID: 243365; SOURCE 4 STRAIN: ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 SOURCE 5 / NCTC 9757; SOURCE 6 GENE: CTEC, CV_1467; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: B834(DE3); SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 GENE: RPS27A; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 16 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS TRANSFERASE, UBIQUITINATION EXPDTA X-RAY DIFFRACTION AUTHOR J.TAN,X.WANG,Y.ZHOU,Y.ZHU REVDAT 2 10-APR-24 8HTC 1 JRNL REVDAT 1 22-NOV-23 8HTC 0 JRNL AUTH J.TAN,Y.XU,X.WANG,F.YAN,W.XIAN,X.LIU,Y.CHEN,Y.ZHU,Y.ZHOU JRNL TITL MOLECULAR BASIS OF THREONINE ADP-RIBOSYLATION OF UBIQUITIN JRNL TITL 2 BY BACTERIAL ARTS. JRNL REF NAT.CHEM.BIOL. V. 20 463 2024 JRNL REFN ESSN 1552-4469 JRNL PMID 37945894 JRNL DOI 10.1038/S41589-023-01475-3 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3228 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.41 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 27314 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 1359 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.4090 - 4.7386 0.98 2622 136 0.1618 0.1809 REMARK 3 2 4.7386 - 3.7620 0.96 2548 132 0.1417 0.2140 REMARK 3 3 3.7620 - 3.2866 0.98 2629 142 0.1736 0.2374 REMARK 3 4 3.2866 - 2.9862 0.99 2602 134 0.1991 0.2156 REMARK 3 5 2.9862 - 2.7723 0.96 2588 136 0.2267 0.3051 REMARK 3 6 2.7723 - 2.6088 0.99 2645 142 0.2331 0.3380 REMARK 3 7 2.6088 - 2.4782 0.99 2645 139 0.2544 0.3386 REMARK 3 8 2.4782 - 2.3703 1.00 2657 138 0.2508 0.3183 REMARK 3 9 2.3703 - 2.2791 1.00 2637 137 0.2552 0.2918 REMARK 3 10 2.2791 - 2.2004 0.89 2382 123 0.2711 0.3353 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.020 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 44 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.3150 6.9208 17.6660 REMARK 3 T TENSOR REMARK 3 T11: 0.1884 T22: 0.1539 REMARK 3 T33: 0.2140 T12: 0.0282 REMARK 3 T13: 0.0455 T23: 0.0237 REMARK 3 L TENSOR REMARK 3 L11: 1.3658 L22: 1.2939 REMARK 3 L33: 0.7671 L12: 0.8054 REMARK 3 L13: 0.5772 L23: 0.6263 REMARK 3 S TENSOR REMARK 3 S11: -0.0962 S12: -0.1704 S13: -0.2118 REMARK 3 S21: -0.1583 S22: -0.0885 S23: -0.0859 REMARK 3 S31: -0.1240 S32: -0.0638 S33: -0.2394 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 117 THROUGH 150 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.0171 12.8735 15.6751 REMARK 3 T TENSOR REMARK 3 T11: 0.2131 T22: 0.2353 REMARK 3 T33: 0.2295 T12: 0.0798 REMARK 3 T13: 0.0263 T23: 0.0004 REMARK 3 L TENSOR REMARK 3 L11: 0.0761 L22: 0.1233 REMARK 3 L33: 0.1086 L12: 0.0886 REMARK 3 L13: 0.1075 L23: 0.0042 REMARK 3 S TENSOR REMARK 3 S11: 0.1403 S12: 0.1477 S13: -0.0159 REMARK 3 S21: -0.3415 S22: -0.1773 S23: -0.0683 REMARK 3 S31: 0.1217 S32: 0.1887 S33: 0.0003 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 151 THROUGH 187 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.9612 27.9050 6.0721 REMARK 3 T TENSOR REMARK 3 T11: 0.2920 T22: 0.2778 REMARK 3 T33: 0.2032 T12: 0.0738 REMARK 3 T13: -0.0222 T23: -0.0075 REMARK 3 L TENSOR REMARK 3 L11: 0.4497 L22: 0.0289 REMARK 3 L33: 0.3902 L12: -0.0996 REMARK 3 L13: 0.2908 L23: -0.0016 REMARK 3 S TENSOR REMARK 3 S11: -0.1488 S12: -0.0093 S13: -0.0369 REMARK 3 S21: 0.0353 S22: 0.0220 S23: 0.1806 REMARK 3 S31: 0.3282 S32: 0.7881 S33: -0.0117 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 188 THROUGH 226 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.1460 23.8961 15.5290 REMARK 3 T TENSOR REMARK 3 T11: 0.2870 T22: 0.1903 REMARK 3 T33: 0.2133 T12: 0.0393 REMARK 3 T13: -0.0535 T23: -0.0173 REMARK 3 L TENSOR REMARK 3 L11: 0.5384 L22: 0.2734 REMARK 3 L33: 0.3839 L12: 0.4046 REMARK 3 L13: -0.4839 L23: -0.3244 REMARK 3 S TENSOR REMARK 3 S11: -0.0171 S12: -0.1711 S13: 0.0023 REMARK 3 S21: -0.4021 S22: -0.1790 S23: 0.0532 REMARK 3 S31: -0.0674 S32: 0.0401 S33: -0.1811 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 227 THROUGH 276 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.9808 3.7688 16.6379 REMARK 3 T TENSOR REMARK 3 T11: 0.0503 T22: 0.1704 REMARK 3 T33: 0.1602 T12: 0.0986 REMARK 3 T13: 0.0031 T23: 0.0140 REMARK 3 L TENSOR REMARK 3 L11: 1.0660 L22: 1.4815 REMARK 3 L33: 0.6973 L12: 0.6230 REMARK 3 L13: 0.4871 L23: 0.6128 REMARK 3 S TENSOR REMARK 3 S11: -0.0131 S12: -0.7816 S13: 0.0483 REMARK 3 S21: -0.7752 S22: -0.3551 S23: -0.0342 REMARK 3 S31: -0.0064 S32: -0.6677 S33: -0.4661 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -2 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.5682 14.8321 -11.9472 REMARK 3 T TENSOR REMARK 3 T11: 0.5898 T22: 0.4036 REMARK 3 T33: 0.3448 T12: 0.1976 REMARK 3 T13: 0.0616 T23: 0.0249 REMARK 3 L TENSOR REMARK 3 L11: 0.0384 L22: -0.0113 REMARK 3 L33: 0.0996 L12: 0.0150 REMARK 3 L13: 0.0061 L23: 0.0255 REMARK 3 S TENSOR REMARK 3 S11: -0.2119 S12: -0.0947 S13: -0.1626 REMARK 3 S21: 0.1261 S22: -0.1327 S23: -0.1118 REMARK 3 S31: 0.5334 S32: 0.3778 S33: 0.0004 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 23 THROUGH 44 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.7803 22.5384 -14.9400 REMARK 3 T TENSOR REMARK 3 T11: 0.1321 T22: 0.4633 REMARK 3 T33: 0.1548 T12: 0.1834 REMARK 3 T13: -0.0020 T23: -0.0515 REMARK 3 L TENSOR REMARK 3 L11: 0.0810 L22: 0.6518 REMARK 3 L33: 0.1455 L12: 0.2183 REMARK 3 L13: -0.0898 L23: -0.2671 REMARK 3 S TENSOR REMARK 3 S11: -0.1847 S12: 0.3088 S13: 0.0133 REMARK 3 S21: -0.6342 S22: 0.3115 S23: 0.2521 REMARK 3 S31: 0.7181 S32: 0.6928 S33: -0.0420 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 45 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.5352 18.1202 -3.5570 REMARK 3 T TENSOR REMARK 3 T11: 0.3528 T22: 0.6442 REMARK 3 T33: 0.2876 T12: 0.2306 REMARK 3 T13: 0.0990 T23: -0.0197 REMARK 3 L TENSOR REMARK 3 L11: 0.1894 L22: 0.1084 REMARK 3 L33: 0.0588 L12: 0.0072 REMARK 3 L13: 0.0919 L23: -0.0392 REMARK 3 S TENSOR REMARK 3 S11: -0.0619 S12: 0.3131 S13: -0.4420 REMARK 3 S21: -0.1583 S22: 0.0346 S23: -0.4935 REMARK 3 S31: 0.2514 S32: 0.1342 S33: 0.0176 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 57 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.8656 18.7817 -6.2380 REMARK 3 T TENSOR REMARK 3 T11: 0.4890 T22: 0.4852 REMARK 3 T33: -0.0321 T12: 0.2170 REMARK 3 T13: 0.0280 T23: 0.0718 REMARK 3 L TENSOR REMARK 3 L11: 0.5011 L22: 0.1858 REMARK 3 L33: 0.2248 L12: 0.0480 REMARK 3 L13: -0.0638 L23: 0.1743 REMARK 3 S TENSOR REMARK 3 S11: -0.3332 S12: -0.3470 S13: 0.3309 REMARK 3 S21: 0.0896 S22: 0.0636 S23: -0.0328 REMARK 3 S31: 1.0622 S32: 0.6671 S33: -0.1934 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8HTC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-JAN-23. REMARK 100 THE DEPOSITION ID IS D_1300034297. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JAN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.25 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27318 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 41.409 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 2.738 REMARK 200 R MERGE (I) : 0.10900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.2100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.48 REMARK 200 R MERGE FOR SHELL (I) : 0.38000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM SODIUM CACODYLATE, PH 6.25, 200 REMARK 280 MM SODIUM ACETATE, 22% PEG 8000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 37.23000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 134 REMARK 465 ALA A 135 REMARK 465 ALA A 136 REMARK 465 THR A 137 REMARK 465 ALA A 138 REMARK 465 ASN A 139 REMARK 465 VAL A 140 REMARK 465 PRO A 141 REMARK 465 SER A 142 REMARK 465 GLY A 143 REMARK 465 LEU A 144 REMARK 465 GLU A 145 REMARK 465 PRO A 146 REMARK 465 SER A 147 REMARK 465 GLY B -4 REMARK 465 PRO B -3 REMARK 465 GLY B 76 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 186 CG CD OE1 OE2 REMARK 470 ASP A 238 CG OD1 OD2 REMARK 470 ARG A 266 CD NE CZ NH1 NH2 REMARK 470 LEU B -2 CG CD1 CD2 REMARK 470 SER B 0 OG REMARK 470 GLU B 16 CG CD OE1 OE2 REMARK 470 GLU B 18 CD OE1 OE2 REMARK 470 GLU B 24 CD OE1 OE2 REMARK 470 GLU B 51 OE1 OE2 REMARK 470 ASP B 52 CG OD1 OD2 REMARK 470 ARG B 54 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 63 CG CD CE NZ REMARK 470 ARG B 74 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 59 -96.12 -116.25 REMARK 500 LEU A 62 -162.67 -166.81 REMARK 500 GLU A 92 54.92 -110.34 REMARK 500 ASP A 115 23.53 -150.28 REMARK 500 ALA A 178 64.38 -150.07 REMARK 500 ARG A 266 145.24 -174.10 REMARK 500 REMARK 500 REMARK: NULL DBREF 8HTC A 45 276 UNP Q7NY09 CTEC_CHRVO 45 276 DBREF 8HTC B 1 76 UNP J3QTR3 J3QTR3_HUMAN 1 76 SEQADV 8HTC SER A 44 UNP Q7NY09 EXPRESSION TAG SEQADV 8HTC GLY B -4 UNP J3QTR3 EXPRESSION TAG SEQADV 8HTC PRO B -3 UNP J3QTR3 EXPRESSION TAG SEQADV 8HTC LEU B -2 UNP J3QTR3 EXPRESSION TAG SEQADV 8HTC GLY B -1 UNP J3QTR3 EXPRESSION TAG SEQADV 8HTC SER B 0 UNP J3QTR3 EXPRESSION TAG SEQRES 1 A 233 SER ASN ARG GLN GLU LYS LEU ALA GLN LEU MSE ARG GLN SEQRES 2 A 233 PHE GLU SER GLY GLY LEU TYR LEU ARG THR VAL SER ASP SEQRES 3 A 233 HIS ARG ASP GLU PHE GLU ASN THR PHE MSE PRO LYS LEU SEQRES 4 A 233 ASP ALA CYS LEU GLY HIS GLY CYS ASP GLU ARG TYR TRP SEQRES 5 A 233 SER SER ALA THR PHE ILE GLN GLN GLY LEU ASN GLY LYS SEQRES 6 A 233 VAL HIS ASP PRO HIS ALA ASP ARG THR GLY LEU ILE ILE SEQRES 7 A 233 SER ALA ASP ALA ARG LEU GLY GLY PHE SER THR PHE ASP SEQRES 8 A 233 ALA ALA THR ALA ASN VAL PRO SER GLY LEU GLU PRO SER SEQRES 9 A 233 GLN TYR PHE PRO GLY GLN PHE PRO LYS PHE ASP MSE MSE SEQRES 10 A 233 GLY ALA TYR GLN ALA THR TRP ASN GLU ASP ILE PHE SER SEQRES 11 A 233 VAL ASP ALA THR ALA VAL SER GLU GLN GLN MSE ASP GLU SEQRES 12 A 233 LEU GLY ILE PRO ASP GLU TYR ARG SER VAL PHE ASP PHE SEQRES 13 A 233 ASP ARG ILE GLN GLU LYS MSE ALA GLN PRO ARG LEU ALA SEQRES 14 A 233 GLY ARG GLU VAL GLU PRO THR GLU ALA LYS ILE CYS TYR SEQRES 15 A 233 GLN PRO LYS ASP VAL LEU GLY ILE TYR VAL ASP VAL ASP SEQRES 16 A 233 SER PRO ALA SER GLN SER LYS ALA ARG GLU LEU GLN GLN SEQRES 17 A 233 ALA MSE ARG GLU GLN GLY PHE ASP LEU PRO PHE ILE ALA SEQRES 18 A 233 TYR ARG GLY GLY ALA ALA GLN GLU LEU ALA SER VAL SEQRES 1 B 81 GLY PRO LEU GLY SER MET GLN ILE PHE VAL LYS THR LEU SEQRES 2 B 81 THR GLY LYS THR ILE THR LEU GLU VAL GLU PRO SER ASP SEQRES 3 B 81 THR ILE GLU ASN VAL LYS ALA LYS ILE GLN ASP LYS GLU SEQRES 4 B 81 GLY ILE PRO PRO ASP GLN GLN ARG LEU ILE PHE ALA GLY SEQRES 5 B 81 LYS GLN LEU GLU ASP GLY ARG THR LEU SER ASP TYR ASN SEQRES 6 B 81 ILE GLN LYS GLU SER THR LEU HIS LEU VAL LEU ARG LEU SEQRES 7 B 81 ARG GLY GLY MODRES 8HTC MSE A 54 MET MODIFIED RESIDUE MODRES 8HTC MSE A 79 MET MODIFIED RESIDUE MODRES 8HTC MSE A 159 MET MODIFIED RESIDUE MODRES 8HTC MSE A 160 MET MODIFIED RESIDUE MODRES 8HTC MSE A 184 MET MODIFIED RESIDUE MODRES 8HTC MSE A 206 MET MODIFIED RESIDUE MODRES 8HTC MSE A 253 MET MODIFIED RESIDUE HET MSE A 54 8 HET MSE A 79 8 HET MSE A 159 8 HET MSE A 160 8 HET MSE A 184 8 HET MSE A 206 8 HET MSE A 253 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 7(C5 H11 N O2 SE) FORMUL 3 HOH *108(H2 O) HELIX 1 AA1 ASN A 45 GLU A 58 1 14 HELIX 2 AA2 ASP A 69 THR A 77 1 9 HELIX 3 AA3 THR A 77 GLY A 87 1 11 HELIX 4 AA4 ASP A 158 TRP A 167 1 10 HELIX 5 AA5 ASN A 168 VAL A 174 5 7 HELIX 6 AA6 SER A 180 GLY A 188 1 9 HELIX 7 AA7 PRO A 190 ARG A 194 5 5 HELIX 8 AA8 ASP A 198 GLY A 213 1 16 HELIX 9 AA9 GLN A 226 LYS A 228 5 3 HELIX 10 AB1 SER A 239 GLU A 255 1 17 HELIX 11 AB2 THR B 22 GLY B 35 1 14 HELIX 12 AB3 PRO B 37 ASP B 39 5 3 HELIX 13 AB4 LEU B 56 ASN B 60 5 5 SHEET 1 AA1 8 ARG A 126 SER A 131 0 SHEET 2 AA1 8 GLU A 220 CYS A 224 -1 O LYS A 222 N GLY A 128 SHEET 3 AA1 8 SER A 96 ILE A 101 -1 N SER A 96 O ILE A 223 SHEET 4 AA1 8 LEU A 62 VAL A 67 -1 N LEU A 64 O THR A 99 SHEET 5 AA1 8 THR A 117 ILE A 121 -1 O LEU A 119 N ARG A 65 SHEET 6 AA1 8 VAL A 230 TYR A 234 -1 O LEU A 231 N ILE A 120 SHEET 7 AA1 8 PHE A 262 ARG A 266 1 O ILE A 263 N ILE A 233 SHEET 8 AA1 8 ALA A 269 LEU A 273 -1 O GLN A 271 N ALA A 264 SHEET 1 AA2 4 THR B 12 VAL B 17 0 SHEET 2 AA2 4 MET B 1 LYS B 6 -1 N MET B 1 O VAL B 17 SHEET 3 AA2 4 THR B 66 LEU B 71 1 O LEU B 67 N PHE B 4 SHEET 4 AA2 4 GLN B 41 ILE B 44 -1 N ILE B 44 O HIS B 68 SSBOND 1 CYS A 85 CYS A 90 1555 1555 2.04 LINK C LEU A 53 N MSE A 54 1555 1555 1.33 LINK C MSE A 54 N ARG A 55 1555 1555 1.34 LINK C PHE A 78 N MSE A 79 1555 1555 1.33 LINK C MSE A 79 N PRO A 80 1555 1555 1.34 LINK C ASP A 158 N MSE A 159 1555 1555 1.33 LINK C MSE A 159 N MSE A 160 1555 1555 1.33 LINK C MSE A 160 N GLY A 161 1555 1555 1.33 LINK C GLN A 183 N MSE A 184 1555 1555 1.33 LINK C MSE A 184 N ASP A 185 1555 1555 1.33 LINK C LYS A 205 N MSE A 206 1555 1555 1.33 LINK C MSE A 206 N ALA A 207 1555 1555 1.34 LINK C ALA A 252 N MSE A 253 1555 1555 1.33 LINK C MSE A 253 N ARG A 254 1555 1555 1.34 CISPEP 1 LEU B -2 GLY B -1 0 0.59 CRYST1 38.490 74.460 50.460 90.00 99.11 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025981 0.000000 0.004165 0.00000 SCALE2 0.000000 0.013430 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020071 0.00000