HEADER STRUCTURAL PROTEIN 06-JAN-23 8HY7 TITLE EGFR KINASE DOMAIN MUTANT "TMLR" WITH COMPOUND 28F COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPIDERMAL GROWTH FACTOR RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROTO-ONCOGENE C-ERBB-1,RECEPTOR TYROSINE-PROTEIN KINASE COMPND 5 ERBB-1; COMPND 6 EC: 2.7.10.1; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EGFR, ERBB, ERBB1, HER1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS INHIBITOR, COMPLEX, EGFR, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.X.WANG,C.Y.WU REVDAT 1 23-AUG-23 8HY7 0 JRNL AUTH Y.X.WANG,C.Y.WU JRNL TITL THE CRYSTAL STRUCTURE OF EGFR KINASE DOMAIN(T790M/L858R) IN JRNL TITL 2 COMPLEX WITH COMPOUND 28F JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.91 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.2 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.91 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.20 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 11553 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.830 REMARK 3 FREE R VALUE TEST SET COUNT : 558 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 10.0000 - 4.6200 1.00 2805 162 0.1854 0.2222 REMARK 3 2 4.6200 - 3.6700 1.00 2746 123 0.1889 0.2657 REMARK 3 3 3.6700 - 3.2100 1.00 2730 135 0.1898 0.2954 REMARK 3 4 3.2000 - 2.9100 1.00 2714 138 0.2680 0.2941 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.280 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : 0.063 372 REMARK 3 PLANARITY : 0.013 418 REMARK 3 DIHEDRAL : 13.977 332 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 7.6101 59.0188 24.0128 REMARK 3 T TENSOR REMARK 3 T11: 0.5224 T22: 0.5529 REMARK 3 T33: 0.4475 T12: -0.0122 REMARK 3 T13: 0.0189 T23: 0.0548 REMARK 3 L TENSOR REMARK 3 L11: 0.7422 L22: 0.8619 REMARK 3 L33: 1.0671 L12: 0.6197 REMARK 3 L13: -0.6351 L23: -0.5980 REMARK 3 S TENSOR REMARK 3 S11: -0.0032 S12: -0.0727 S13: -0.1222 REMARK 3 S21: -0.0770 S22: -0.1276 S23: -0.0631 REMARK 3 S31: 0.1693 S32: 0.0440 S33: -0.0002 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8HY7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-JAN-23. REMARK 100 THE DEPOSITION ID IS D_1300034581. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOXDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 228940 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.910 REMARK 200 RESOLUTION RANGE LOW (A) : 42.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 19.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.91 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.99 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES, PH 7.0, 10% (W/V) PEG REMARK 280 10000, 10%(V/V) ETHYLENE GLYCOL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 73.10000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 73.10000 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 73.10000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 73.10000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 73.10000 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 73.10000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 73.10000 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 73.10000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 73.10000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 73.10000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 73.10000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 73.10000 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 73.10000 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 73.10000 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 73.10000 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 73.10000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 73.10000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 73.10000 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 73.10000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 73.10000 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 73.10000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 73.10000 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 73.10000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 73.10000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 73.10000 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 73.10000 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 73.10000 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 73.10000 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 73.10000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 73.10000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 73.10000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 73.10000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 73.10000 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 73.10000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 73.10000 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 73.10000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 695 REMARK 465 LEU A 747 REMARK 465 ARG A 748 REMARK 465 GLU A 749 REMARK 465 ALA A 750 REMARK 465 LEU A 862 REMARK 465 GLY A 863 REMARK 465 ALA A 864 REMARK 465 ALA A 865 REMARK 465 ALA A 866 REMARK 465 ALA A 867 REMARK 465 GLU A 868 REMARK 465 TYR A 869 REMARK 465 HIS A 870 REMARK 465 ALA A 871 REMARK 465 GLU A 872 REMARK 465 GLY A 873 REMARK 465 GLY A 874 REMARK 465 LYS A 875 REMARK 465 ARG A 999 REMARK 465 ALA A 1000 REMARK 465 LEU A 1001 REMARK 465 MET A 1002 REMARK 465 ASP A 1003 REMARK 465 GLU A 1004 REMARK 465 GLU A 1005 REMARK 465 GLN A 1020 REMARK 465 GLN A 1021 REMARK 465 GLY A 1022 REMARK 465 ASN A 1023 REMARK 465 SER A 1024 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 705 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 723 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 734 CG CD OE1 OE2 REMARK 470 LYS A 860 CG CD CE NZ REMARK 470 ARG A 986 CG CD NE CZ NH1 NH2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 709 CD REMARK 480 LYS A 728 CE NZ REMARK 480 ARG A 776 CD CZ REMARK 480 GLU A 804 CD REMARK 480 GLU A 922 CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS A 797 H12 NSO A 1102 1.18 REMARK 500 OE2 GLU A 762 O HOH A 1202 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HE22 GLN A 976 OE1 GLU A 985 4565 1.25 REMARK 500 NE2 GLN A 976 OE1 GLU A 985 4565 1.44 REMARK 500 O HOH A 1203 O HOH A 1217 23455 1.62 REMARK 500 CD GLN A 976 OE1 GLU A 985 4565 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 985 CB GLU A 985 CG 0.161 REMARK 500 GLU A 985 CD GLU A 985 OE1 0.084 REMARK 500 GLU A 985 CD GLU A 985 OE2 -0.195 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 985 N - CA - CB ANGL. DEV. = 15.0 DEGREES REMARK 500 GLU A 985 CA - CB - CG ANGL. DEV. = 13.6 DEGREES REMARK 500 GLU A 985 CB - CG - CD ANGL. DEV. = 33.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 697 -169.17 -119.55 REMARK 500 ALA A 722 68.27 -152.62 REMARK 500 LEU A 782 67.33 -100.78 REMARK 500 LYS A 806 -60.80 -15.69 REMARK 500 ARG A 836 15.85 57.16 REMARK 500 ASP A 837 47.87 -158.93 REMARK 500 HIS A 850 119.65 -160.69 REMARK 500 ASP A 855 82.00 43.56 REMARK 500 PHE A 856 31.22 -95.96 REMARK 500 LYS A 860 -158.92 -145.58 REMARK 500 ARG A 889 44.26 34.67 REMARK 500 PHE A 910 37.87 70.37 REMARK 500 ASP A 916 99.08 -61.42 REMARK 500 PHE A 961 -39.68 -38.80 REMARK 500 ARG A 986 57.15 -116.15 REMARK 500 PRO A 990 161.49 -43.76 REMARK 500 THR A 993 32.68 -89.32 REMARK 500 PHE A 997 129.99 -30.68 REMARK 500 ASP A1009 16.71 80.86 REMARK 500 ILE A1018 144.05 -33.43 REMARK 500 REMARK 500 REMARK: NULL DBREF 8HY7 A 695 1022 UNP P00533 EGFR_HUMAN 695 1022 SEQADV 8HY7 MET A 790 UNP P00533 THR 790 VARIANT SEQADV 8HY7 ARG A 858 UNP P00533 LEU 858 VARIANT SEQADV 8HY7 ALA A 865 UNP P00533 GLU 865 ENGINEERED MUTATION SEQADV 8HY7 ALA A 866 UNP P00533 GLU 866 ENGINEERED MUTATION SEQADV 8HY7 ALA A 867 UNP P00533 LYS 867 ENGINEERED MUTATION SEQADV 8HY7 ASN A 1023 UNP P00533 EXPRESSION TAG SEQADV 8HY7 SER A 1024 UNP P00533 EXPRESSION TAG SEQRES 1 A 330 SER GLY GLU ALA PRO ASN GLN ALA LEU LEU ARG ILE LEU SEQRES 2 A 330 LYS GLU THR GLU PHE LYS LYS ILE LYS VAL LEU GLY SER SEQRES 3 A 330 GLY ALA PHE GLY THR VAL TYR LYS GLY LEU TRP ILE PRO SEQRES 4 A 330 GLU GLY GLU LYS VAL LYS ILE PRO VAL ALA ILE LYS GLU SEQRES 5 A 330 LEU ARG GLU ALA THR SER PRO LYS ALA ASN LYS GLU ILE SEQRES 6 A 330 LEU ASP GLU ALA TYR VAL MET ALA SER VAL ASP ASN PRO SEQRES 7 A 330 HIS VAL CYS ARG LEU LEU GLY ILE CYS LEU THR SER THR SEQRES 8 A 330 VAL GLN LEU ILE MET GLN LEU MET PRO PHE GLY CYS LEU SEQRES 9 A 330 LEU ASP TYR VAL ARG GLU HIS LYS ASP ASN ILE GLY SER SEQRES 10 A 330 GLN TYR LEU LEU ASN TRP CYS VAL GLN ILE ALA LYS GLY SEQRES 11 A 330 MET ASN TYR LEU GLU ASP ARG ARG LEU VAL HIS ARG ASP SEQRES 12 A 330 LEU ALA ALA ARG ASN VAL LEU VAL LYS THR PRO GLN HIS SEQRES 13 A 330 VAL LYS ILE THR ASP PHE GLY ARG ALA LYS LEU LEU GLY SEQRES 14 A 330 ALA ALA ALA ALA GLU TYR HIS ALA GLU GLY GLY LYS VAL SEQRES 15 A 330 PRO ILE LYS TRP MET ALA LEU GLU SER ILE LEU HIS ARG SEQRES 16 A 330 ILE TYR THR HIS GLN SER ASP VAL TRP SER TYR GLY VAL SEQRES 17 A 330 THR VAL TRP GLU LEU MET THR PHE GLY SER LYS PRO TYR SEQRES 18 A 330 ASP GLY ILE PRO ALA SER GLU ILE SER SER ILE LEU GLU SEQRES 19 A 330 LYS GLY GLU ARG LEU PRO GLN PRO PRO ILE CYS THR ILE SEQRES 20 A 330 ASP VAL TYR MET ILE MET VAL LYS CYS TRP MET ILE ASP SEQRES 21 A 330 ALA ASP SER ARG PRO LYS PHE ARG GLU LEU ILE ILE GLU SEQRES 22 A 330 PHE SER LYS MET ALA ARG ASP PRO GLN ARG TYR LEU VAL SEQRES 23 A 330 ILE GLN GLY ASP GLU ARG MET HIS LEU PRO SER PRO THR SEQRES 24 A 330 ASP SER ASN PHE TYR ARG ALA LEU MET ASP GLU GLU ASP SEQRES 25 A 330 MET ASP ASP VAL VAL ASP ALA ASP GLU TYR LEU ILE PRO SEQRES 26 A 330 GLN GLN GLY ASN SER HET NSO A1102 65 HETNAM NSO ~{N}-[3-[[6-FLUORANYL-2-[[4-(4-METHYLPIPERAZIN-1-YL) HETNAM 2 NSO PHENYL]AMINO]QUINAZOLIN-4-YL]AMINO]PHENYL]PROP-2- HETNAM 3 NSO ENAMIDE FORMUL 2 NSO C28 H28 F N7 O FORMUL 3 HOH *26(H2 O) HELIX 1 AA1 SER A 752 ALA A 767 1 16 HELIX 2 AA2 CYS A 797 LYS A 806 1 10 HELIX 3 AA3 ASP A 807 ILE A 809 5 3 HELIX 4 AA4 GLY A 810 ARG A 831 1 22 HELIX 5 AA5 ALA A 839 ARG A 841 5 3 HELIX 6 AA6 PRO A 877 MET A 881 5 5 HELIX 7 AA7 ALA A 882 ARG A 889 1 8 HELIX 8 AA8 THR A 892 THR A 909 1 18 HELIX 9 AA9 PRO A 919 LYS A 929 1 11 HELIX 10 AB1 THR A 940 CYS A 950 1 11 HELIX 11 AB2 LYS A 960 ALA A 972 1 13 HELIX 12 AB3 ARG A 973 TYR A 978 5 6 HELIX 13 AB4 ASP A 1012 TYR A 1016 5 5 SHEET 1 AA1 6 ILE A 706 LEU A 707 0 SHEET 2 AA1 6 LEU A 777 LEU A 782 1 O ILE A 780 N LEU A 707 SHEET 3 AA1 6 VAL A 786 GLN A 791 -1 O ILE A 789 N GLY A 779 SHEET 4 AA1 6 ILE A 740 LYS A 745 -1 N ALA A 743 O MET A 790 SHEET 5 AA1 6 THR A 725 TRP A 731 -1 N TRP A 731 O ILE A 740 SHEET 6 AA1 6 PHE A 712 SER A 720 -1 N ILE A 715 O LYS A 728 SHEET 1 AA2 2 VAL A 843 THR A 847 0 SHEET 2 AA2 2 HIS A 850 ILE A 853 -1 O LYS A 852 N LEU A 844 LINK SG CYS A 797 C23 NSO A1102 1555 1555 1.77 CRYST1 146.200 146.200 146.200 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006840 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006840 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006840 0.00000