HEADER HYDROLASE/VIRAL PROTEIN 06-FEB-23 8I9G TITLE S-RBD (OMICRON BF.7) IN COMPLEX WITH PD OF ACE2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROCESSED ANGIOTENSIN-CONVERTING ENZYME 2; COMPND 3 CHAIN: D; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: SPIKE PROTEIN S2'; COMPND 7 CHAIN: A; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ACE2, UNQ868/PRO1885; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 10 2; SOURCE 11 ORGANISM_TAXID: 2697049; SOURCE 12 GENE: S, 2; SOURCE 13 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS SARS-COV-2, VIRAL PROTEIN, VIRAL PROTEIN-HYDROLASE COMPLEX, KEYWDS 2 HYDROLASE-VIRAL PROTEIN COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR Y.N.LI,Y.P.SHEN,Y.Y.ZHANG,R.H.YAN REVDAT 3 23-OCT-24 8I9G 1 REMARK REVDAT 2 21-AUG-24 8I9G 1 JRNL REVDAT 1 07-FEB-24 8I9G 0 JRNL AUTH Y.LI,C.REN,Y.SHEN,Y.ZHANG,J.CHEN,J.ZHENG,R.TIAN,L.CAO,R.YAN JRNL TITL CRYO-EM STRUCTURES OF SARS-COV-2 BA.2-DERIVED SUBVARIANTS JRNL TITL 2 SPIKE IN COMPLEX WITH ACE2 RECEPTOR. JRNL REF CELL DISCOV V. 9 108 2023 JRNL REFN ESSN 2056-5968 JRNL PMID 37919275 JRNL DOI 10.1038/S41421-023-00607-2 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : RELION REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.200 REMARK 3 NUMBER OF PARTICLES : 109797 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8I9G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-FEB-23. REMARK 100 THE DEPOSITION ID IS D_1300035183. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : S-RBD (OMICRON BF.7) IN COMPLEX REMARK 245 WITH PD OF ACE2; S-RBD (OMICRON REMARK 245 BF.7); PD OF ACE2 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1200.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2200.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, A, B, C, E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET D 0 REMARK 465 GLY D 1 REMARK 465 VAL D 2 REMARK 465 LYS D 3 REMARK 465 VAL D 4 REMARK 465 LEU D 5 REMARK 465 PHE D 6 REMARK 465 ALA D 7 REMARK 465 LEU D 8 REMARK 465 ILE D 9 REMARK 465 CYS D 10 REMARK 465 ILE D 11 REMARK 465 ALA D 12 REMARK 465 VAL D 13 REMARK 465 ALA D 14 REMARK 465 GLU D 15 REMARK 465 ALA D 16 REMARK 465 GLY D 17 REMARK 465 THR D 18 REMARK 465 ARG A 319 REMARK 465 VAL A 320 REMARK 465 GLN A 321 REMARK 465 PRO A 322 REMARK 465 THR A 323 REMARK 465 GLU A 324 REMARK 465 SER A 325 REMARK 465 ILE A 326 REMARK 465 VAL A 327 REMARK 465 ARG A 328 REMARK 465 PHE A 329 REMARK 465 PRO A 330 REMARK 465 ASN A 331 REMARK 465 ILE A 332 REMARK 465 THR A 333 REMARK 465 ASN A 334 REMARK 465 LEU A 335 REMARK 465 ASN A 360 REMARK 465 CYS A 361 REMARK 465 VAL A 362 REMARK 465 ALA A 363 REMARK 465 LEU A 518 REMARK 465 HIS A 519 REMARK 465 ALA A 520 REMARK 465 PRO A 521 REMARK 465 ALA A 522 REMARK 465 GLY A 526 REMARK 465 PRO A 527 REMARK 465 LYS A 528 REMARK 465 LYS A 529 REMARK 465 SER A 530 REMARK 465 THR A 531 REMARK 465 ASN A 532 REMARK 465 LEU A 533 REMARK 465 VAL A 534 REMARK 465 LYS A 535 REMARK 465 ASN A 536 REMARK 465 LYS A 537 REMARK 465 CYS A 538 REMARK 465 VAL A 539 REMARK 465 ASN A 540 REMARK 465 PHE A 541 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER D 105 -167.58 -79.11 REMARK 500 GLU D 197 -11.33 72.09 REMARK 500 ASP D 198 175.09 179.93 REMARK 500 GLN D 325 -9.91 71.86 REMARK 500 ASN D 338 -72.47 -64.21 REMARK 500 GLN D 340 49.32 -143.54 REMARK 500 PRO D 389 170.21 -57.70 REMARK 500 ASP D 427 -65.25 -93.28 REMARK 500 ILE D 484 -61.96 -101.51 REMARK 500 VAL D 573 -53.09 -121.15 REMARK 500 ALA A 348 -177.50 -69.88 REMARK 500 PHE A 371 -62.63 -90.88 REMARK 500 LYS A 386 30.80 -92.14 REMARK 500 ASP A 428 37.98 -98.43 REMARK 500 SER A 494 136.46 -37.34 REMARK 500 THR A 500 52.02 -91.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-35270 RELATED DB: EMDB REMARK 900 S-RBD (OMICRON BF.7) IN COMPLEX WITH PD OF ACE2 DBREF 8I9G D 19 615 UNP Q9BYF1 ACE2_HUMAN 19 615 DBREF 8I9G A 319 541 UNP P0DTC2 SPIKE_SARS2 319 541 SEQADV 8I9G MET D 0 UNP Q9BYF1 INITIATING METHIONINE SEQADV 8I9G GLY D 1 UNP Q9BYF1 EXPRESSION TAG SEQADV 8I9G VAL D 2 UNP Q9BYF1 EXPRESSION TAG SEQADV 8I9G LYS D 3 UNP Q9BYF1 EXPRESSION TAG SEQADV 8I9G VAL D 4 UNP Q9BYF1 EXPRESSION TAG SEQADV 8I9G LEU D 5 UNP Q9BYF1 EXPRESSION TAG SEQADV 8I9G PHE D 6 UNP Q9BYF1 EXPRESSION TAG SEQADV 8I9G ALA D 7 UNP Q9BYF1 EXPRESSION TAG SEQADV 8I9G LEU D 8 UNP Q9BYF1 EXPRESSION TAG SEQADV 8I9G ILE D 9 UNP Q9BYF1 EXPRESSION TAG SEQADV 8I9G CYS D 10 UNP Q9BYF1 EXPRESSION TAG SEQADV 8I9G ILE D 11 UNP Q9BYF1 EXPRESSION TAG SEQADV 8I9G ALA D 12 UNP Q9BYF1 EXPRESSION TAG SEQADV 8I9G VAL D 13 UNP Q9BYF1 EXPRESSION TAG SEQADV 8I9G ALA D 14 UNP Q9BYF1 EXPRESSION TAG SEQADV 8I9G GLU D 15 UNP Q9BYF1 EXPRESSION TAG SEQADV 8I9G ALA D 16 UNP Q9BYF1 EXPRESSION TAG SEQADV 8I9G GLY D 17 UNP Q9BYF1 EXPRESSION TAG SEQADV 8I9G THR D 18 UNP Q9BYF1 EXPRESSION TAG SEQADV 8I9G ASP A 339 UNP P0DTC2 GLY 339 VARIANT SEQADV 8I9G THR A 346 UNP P0DTC2 ARG 346 VARIANT SEQADV 8I9G PHE A 371 UNP P0DTC2 SER 371 VARIANT SEQADV 8I9G PRO A 373 UNP P0DTC2 SER 373 VARIANT SEQADV 8I9G PHE A 375 UNP P0DTC2 SER 375 VARIANT SEQADV 8I9G ALA A 376 UNP P0DTC2 THR 376 VARIANT SEQADV 8I9G ASN A 405 UNP P0DTC2 ASP 405 VARIANT SEQADV 8I9G SER A 408 UNP P0DTC2 ARG 408 VARIANT SEQADV 8I9G ASN A 417 UNP P0DTC2 LYS 417 VARIANT SEQADV 8I9G LYS A 440 UNP P0DTC2 ASN 440 VARIANT SEQADV 8I9G ARG A 452 UNP P0DTC2 LEU 452 VARIANT SEQADV 8I9G ASN A 477 UNP P0DTC2 SER 477 VARIANT SEQADV 8I9G LYS A 478 UNP P0DTC2 THR 478 VARIANT SEQADV 8I9G ALA A 484 UNP P0DTC2 GLU 484 VARIANT SEQADV 8I9G VAL A 486 UNP P0DTC2 PHE 486 VARIANT SEQADV 8I9G ARG A 498 UNP P0DTC2 GLN 498 VARIANT SEQADV 8I9G TYR A 501 UNP P0DTC2 ASN 501 VARIANT SEQADV 8I9G HIS A 505 UNP P0DTC2 TYR 505 VARIANT SEQRES 1 D 616 MET GLY VAL LYS VAL LEU PHE ALA LEU ILE CYS ILE ALA SEQRES 2 D 616 VAL ALA GLU ALA GLY THR SER THR ILE GLU GLU GLN ALA SEQRES 3 D 616 LYS THR PHE LEU ASP LYS PHE ASN HIS GLU ALA GLU ASP SEQRES 4 D 616 LEU PHE TYR GLN SER SER LEU ALA SER TRP ASN TYR ASN SEQRES 5 D 616 THR ASN ILE THR GLU GLU ASN VAL GLN ASN MET ASN ASN SEQRES 6 D 616 ALA GLY ASP LYS TRP SER ALA PHE LEU LYS GLU GLN SER SEQRES 7 D 616 THR LEU ALA GLN MET TYR PRO LEU GLN GLU ILE GLN ASN SEQRES 8 D 616 LEU THR VAL LYS LEU GLN LEU GLN ALA LEU GLN GLN ASN SEQRES 9 D 616 GLY SER SER VAL LEU SER GLU ASP LYS SER LYS ARG LEU SEQRES 10 D 616 ASN THR ILE LEU ASN THR MET SER THR ILE TYR SER THR SEQRES 11 D 616 GLY LYS VAL CYS ASN PRO ASP ASN PRO GLN GLU CYS LEU SEQRES 12 D 616 LEU LEU GLU PRO GLY LEU ASN GLU ILE MET ALA ASN SER SEQRES 13 D 616 LEU ASP TYR ASN GLU ARG LEU TRP ALA TRP GLU SER TRP SEQRES 14 D 616 ARG SER GLU VAL GLY LYS GLN LEU ARG PRO LEU TYR GLU SEQRES 15 D 616 GLU TYR VAL VAL LEU LYS ASN GLU MET ALA ARG ALA ASN SEQRES 16 D 616 HIS TYR GLU ASP TYR GLY ASP TYR TRP ARG GLY ASP TYR SEQRES 17 D 616 GLU VAL ASN GLY VAL ASP GLY TYR ASP TYR SER ARG GLY SEQRES 18 D 616 GLN LEU ILE GLU ASP VAL GLU HIS THR PHE GLU GLU ILE SEQRES 19 D 616 LYS PRO LEU TYR GLU HIS LEU HIS ALA TYR VAL ARG ALA SEQRES 20 D 616 LYS LEU MET ASN ALA TYR PRO SER TYR ILE SER PRO ILE SEQRES 21 D 616 GLY CYS LEU PRO ALA HIS LEU LEU GLY ASP MET TRP GLY SEQRES 22 D 616 ARG PHE TRP THR ASN LEU TYR SER LEU THR VAL PRO PHE SEQRES 23 D 616 GLY GLN LYS PRO ASN ILE ASP VAL THR ASP ALA MET VAL SEQRES 24 D 616 ASP GLN ALA TRP ASP ALA GLN ARG ILE PHE LYS GLU ALA SEQRES 25 D 616 GLU LYS PHE PHE VAL SER VAL GLY LEU PRO ASN MET THR SEQRES 26 D 616 GLN GLY PHE TRP GLU ASN SER MET LEU THR ASP PRO GLY SEQRES 27 D 616 ASN VAL GLN LYS ALA VAL CYS HIS PRO THR ALA TRP ASP SEQRES 28 D 616 LEU GLY LYS GLY ASP PHE ARG ILE LEU MET CYS THR LYS SEQRES 29 D 616 VAL THR MET ASP ASP PHE LEU THR ALA HIS HIS GLU MET SEQRES 30 D 616 GLY HIS ILE GLN TYR ASP MET ALA TYR ALA ALA GLN PRO SEQRES 31 D 616 PHE LEU LEU ARG ASN GLY ALA ASN GLU GLY PHE HIS GLU SEQRES 32 D 616 ALA VAL GLY GLU ILE MET SER LEU SER ALA ALA THR PRO SEQRES 33 D 616 LYS HIS LEU LYS SER ILE GLY LEU LEU SER PRO ASP PHE SEQRES 34 D 616 GLN GLU ASP ASN GLU THR GLU ILE ASN PHE LEU LEU LYS SEQRES 35 D 616 GLN ALA LEU THR ILE VAL GLY THR LEU PRO PHE THR TYR SEQRES 36 D 616 MET LEU GLU LYS TRP ARG TRP MET VAL PHE LYS GLY GLU SEQRES 37 D 616 ILE PRO LYS ASP GLN TRP MET LYS LYS TRP TRP GLU MET SEQRES 38 D 616 LYS ARG GLU ILE VAL GLY VAL VAL GLU PRO VAL PRO HIS SEQRES 39 D 616 ASP GLU THR TYR CYS ASP PRO ALA SER LEU PHE HIS VAL SEQRES 40 D 616 SER ASN ASP TYR SER PHE ILE ARG TYR TYR THR ARG THR SEQRES 41 D 616 LEU TYR GLN PHE GLN PHE GLN GLU ALA LEU CYS GLN ALA SEQRES 42 D 616 ALA LYS HIS GLU GLY PRO LEU HIS LYS CYS ASP ILE SER SEQRES 43 D 616 ASN SER THR GLU ALA GLY GLN LYS LEU PHE ASN MET LEU SEQRES 44 D 616 ARG LEU GLY LYS SER GLU PRO TRP THR LEU ALA LEU GLU SEQRES 45 D 616 ASN VAL VAL GLY ALA LYS ASN MET ASN VAL ARG PRO LEU SEQRES 46 D 616 LEU ASN TYR PHE GLU PRO LEU PHE THR TRP LEU LYS ASP SEQRES 47 D 616 GLN ASN LYS ASN SER PHE VAL GLY TRP SER THR ASP TRP SEQRES 48 D 616 SER PRO TYR ALA ASP SEQRES 1 A 223 ARG VAL GLN PRO THR GLU SER ILE VAL ARG PHE PRO ASN SEQRES 2 A 223 ILE THR ASN LEU CYS PRO PHE ASP GLU VAL PHE ASN ALA SEQRES 3 A 223 THR THR PHE ALA SER VAL TYR ALA TRP ASN ARG LYS ARG SEQRES 4 A 223 ILE SER ASN CYS VAL ALA ASP TYR SER VAL LEU TYR ASN SEQRES 5 A 223 PHE ALA PRO PHE PHE ALA PHE LYS CYS TYR GLY VAL SER SEQRES 6 A 223 PRO THR LYS LEU ASN ASP LEU CYS PHE THR ASN VAL TYR SEQRES 7 A 223 ALA ASP SER PHE VAL ILE ARG GLY ASN GLU VAL SER GLN SEQRES 8 A 223 ILE ALA PRO GLY GLN THR GLY ASN ILE ALA ASP TYR ASN SEQRES 9 A 223 TYR LYS LEU PRO ASP ASP PHE THR GLY CYS VAL ILE ALA SEQRES 10 A 223 TRP ASN SER ASN LYS LEU ASP SER LYS VAL GLY GLY ASN SEQRES 11 A 223 TYR ASN TYR ARG TYR ARG LEU PHE ARG LYS SER ASN LEU SEQRES 12 A 223 LYS PRO PHE GLU ARG ASP ILE SER THR GLU ILE TYR GLN SEQRES 13 A 223 ALA GLY ASN LYS PRO CYS ASN GLY VAL ALA GLY VAL ASN SEQRES 14 A 223 CYS TYR PHE PRO LEU GLN SER TYR GLY PHE ARG PRO THR SEQRES 15 A 223 TYR GLY VAL GLY HIS GLN PRO TYR ARG VAL VAL VAL LEU SEQRES 16 A 223 SER PHE GLU LEU LEU HIS ALA PRO ALA THR VAL CYS GLY SEQRES 17 A 223 PRO LYS LYS SER THR ASN LEU VAL LYS ASN LYS CYS VAL SEQRES 18 A 223 ASN PHE HET NAG B 1 14 HET NAG B 2 14 HET NAG C 1 14 HET NAG C 2 14 HET NAG E 1 14 HET NAG E 2 14 HET NAG F 1 14 HET NAG F 2 14 HET NAG G 1 14 HET NAG G 2 14 HET NAG H 1 14 HET NAG H 2 14 HET NAG D 701 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 NAG 13(C8 H15 N O6) HELIX 1 AA1 GLU D 22 ASN D 53 1 32 HELIX 2 AA2 GLU D 56 ALA D 80 1 25 HELIX 3 AA3 GLN D 81 TYR D 83 5 3 HELIX 4 AA4 ASN D 90 GLN D 102 1 13 HELIX 5 AA5 SER D 109 THR D 129 1 21 HELIX 6 AA6 GLY D 147 SER D 155 1 9 HELIX 7 AA7 ASP D 157 VAL D 172 1 16 HELIX 8 AA8 LEU D 176 ALA D 193 1 18 HELIX 9 AA9 ASP D 198 GLY D 205 1 8 HELIX 10 AB1 ASP D 206 GLU D 208 5 3 HELIX 11 AB2 GLY D 220 PHE D 230 1 11 HELIX 12 AB3 ILE D 233 MET D 249 1 17 HELIX 13 AB4 TRP D 275 TYR D 279 5 5 HELIX 14 AB5 THR D 294 GLN D 300 1 7 HELIX 15 AB6 GLN D 305 VAL D 318 1 14 HELIX 16 AB7 GLY D 326 SER D 331 1 6 HELIX 17 AB8 MET D 366 TYR D 385 1 20 HELIX 18 AB9 PRO D 389 ARG D 393 5 5 HELIX 19 AC1 PHE D 400 ALA D 412 1 13 HELIX 20 AC2 THR D 414 GLY D 422 1 9 HELIX 21 AC3 ASP D 431 VAL D 447 1 17 HELIX 22 AC4 THR D 449 LYS D 465 1 17 HELIX 23 AC5 GLN D 472 ILE D 484 1 13 HELIX 24 AC6 ASP D 499 SER D 502 5 4 HELIX 25 AC7 LEU D 503 ASN D 508 1 6 HELIX 26 AC8 ILE D 513 ALA D 533 1 21 HELIX 27 AC9 PRO D 538 CYS D 542 5 5 HELIX 28 AD1 SER D 547 ARG D 559 1 13 HELIX 29 AD2 PRO D 565 LEU D 570 1 6 HELIX 30 AD3 LEU D 570 GLY D 575 1 6 HELIX 31 AD4 VAL D 581 ASN D 599 1 19 HELIX 32 AD5 PRO A 337 PHE A 342 1 6 HELIX 33 AD6 TYR A 365 ASN A 370 1 6 HELIX 34 AD7 ARG A 403 ILE A 410 5 8 SHEET 1 AA1 2 LEU D 262 PRO D 263 0 SHEET 2 AA1 2 VAL D 487 VAL D 488 1 O VAL D 488 N LEU D 262 SHEET 1 AA2 2 THR D 347 GLY D 352 0 SHEET 2 AA2 2 ASP D 355 LEU D 359 -1 O ARG D 357 N TRP D 349 SHEET 1 AA3 5 ASN A 354 ILE A 358 0 SHEET 2 AA3 5 ASN A 394 ILE A 402 -1 O ALA A 397 N LYS A 356 SHEET 3 AA3 5 TYR A 508 GLU A 516 -1 O TYR A 508 N ILE A 402 SHEET 4 AA3 5 CYS A 432 ASN A 437 -1 N CYS A 432 O LEU A 513 SHEET 5 AA3 5 ALA A 376 CYS A 379 -1 N ALA A 376 O ALA A 435 SHEET 1 AA4 2 TYR A 473 GLN A 474 0 SHEET 2 AA4 2 CYS A 488 TYR A 489 -1 O TYR A 489 N TYR A 473 SSBOND 1 CYS D 133 CYS D 141 1555 1555 2.04 SSBOND 2 CYS D 344 CYS D 361 1555 1555 2.04 SSBOND 3 CYS A 379 CYS A 432 1555 1555 2.04 SSBOND 4 CYS A 391 CYS A 525 1555 1555 2.03 SSBOND 5 CYS A 480 CYS A 488 1555 1555 2.03 LINK ND2 ASN D 53 C1 NAG B 1 1555 1555 1.44 LINK ND2 ASN D 90 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN D 103 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN D 322 C1 NAG D 701 1555 1555 1.44 LINK ND2 ASN D 432 C1 NAG F 1 1555 1555 1.44 LINK ND2 ASN D 546 C1 NAG G 1 1555 1555 1.44 LINK ND2 ASN A 343 C1 NAG H 1 1555 1555 1.40 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.43 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.44 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.44 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 CONECT 293 6328 CONECT 592 6356 CONECT 696 6384 CONECT 919 981 CONECT 981 919 CONECT 2484 6496 CONECT 2653 2789 CONECT 2789 2653 CONECT 3340 6412 CONECT 4307 6440 CONECT 4938 6468 CONECT 5207 5614 CONECT 5297 6326 CONECT 5614 5207 CONECT 6013 6062 CONECT 6062 6013 CONECT 6326 5297 CONECT 6328 293 6329 6339 CONECT 6329 6328 6330 6336 CONECT 6330 6329 6331 6337 CONECT 6331 6330 6332 6338 CONECT 6332 6331 6333 6339 CONECT 6333 6332 6340 CONECT 6334 6335 6336 6341 CONECT 6335 6334 CONECT 6336 6329 6334 CONECT 6337 6330 CONECT 6338 6331 6342 CONECT 6339 6328 6332 CONECT 6340 6333 CONECT 6341 6334 CONECT 6342 6338 6343 6353 CONECT 6343 6342 6344 6350 CONECT 6344 6343 6345 6351 CONECT 6345 6344 6346 6352 CONECT 6346 6345 6347 6353 CONECT 6347 6346 6354 CONECT 6348 6349 6350 6355 CONECT 6349 6348 CONECT 6350 6343 6348 CONECT 6351 6344 CONECT 6352 6345 CONECT 6353 6342 6346 CONECT 6354 6347 CONECT 6355 6348 CONECT 6356 592 6357 6367 CONECT 6357 6356 6358 6364 CONECT 6358 6357 6359 6365 CONECT 6359 6358 6360 6366 CONECT 6360 6359 6361 6367 CONECT 6361 6360 6368 CONECT 6362 6363 6364 6369 CONECT 6363 6362 CONECT 6364 6357 6362 CONECT 6365 6358 CONECT 6366 6359 6370 CONECT 6367 6356 6360 CONECT 6368 6361 CONECT 6369 6362 CONECT 6370 6366 6371 6381 CONECT 6371 6370 6372 6378 CONECT 6372 6371 6373 6379 CONECT 6373 6372 6374 6380 CONECT 6374 6373 6375 6381 CONECT 6375 6374 6382 CONECT 6376 6377 6378 6383 CONECT 6377 6376 CONECT 6378 6371 6376 CONECT 6379 6372 CONECT 6380 6373 CONECT 6381 6370 6374 CONECT 6382 6375 CONECT 6383 6376 CONECT 6384 696 6385 6395 CONECT 6385 6384 6386 6392 CONECT 6386 6385 6387 6393 CONECT 6387 6386 6388 6394 CONECT 6388 6387 6389 6395 CONECT 6389 6388 6396 CONECT 6390 6391 6392 6397 CONECT 6391 6390 CONECT 6392 6385 6390 CONECT 6393 6386 CONECT 6394 6387 6398 CONECT 6395 6384 6388 CONECT 6396 6389 CONECT 6397 6390 CONECT 6398 6394 6399 6409 CONECT 6399 6398 6400 6406 CONECT 6400 6399 6401 6407 CONECT 6401 6400 6402 6408 CONECT 6402 6401 6403 6409 CONECT 6403 6402 6410 CONECT 6404 6405 6406 6411 CONECT 6405 6404 CONECT 6406 6399 6404 CONECT 6407 6400 CONECT 6408 6401 CONECT 6409 6398 6402 CONECT 6410 6403 CONECT 6411 6404 CONECT 6412 3340 6413 6423 CONECT 6413 6412 6414 6420 CONECT 6414 6413 6415 6421 CONECT 6415 6414 6416 6422 CONECT 6416 6415 6417 6423 CONECT 6417 6416 6424 CONECT 6418 6419 6420 6425 CONECT 6419 6418 CONECT 6420 6413 6418 CONECT 6421 6414 CONECT 6422 6415 6426 CONECT 6423 6412 6416 CONECT 6424 6417 CONECT 6425 6418 CONECT 6426 6422 6427 6437 CONECT 6427 6426 6428 6434 CONECT 6428 6427 6429 6435 CONECT 6429 6428 6430 6436 CONECT 6430 6429 6431 6437 CONECT 6431 6430 6438 CONECT 6432 6433 6434 6439 CONECT 6433 6432 CONECT 6434 6427 6432 CONECT 6435 6428 CONECT 6436 6429 CONECT 6437 6426 6430 CONECT 6438 6431 CONECT 6439 6432 CONECT 6440 4307 6441 6451 CONECT 6441 6440 6442 6448 CONECT 6442 6441 6443 6449 CONECT 6443 6442 6444 6450 CONECT 6444 6443 6445 6451 CONECT 6445 6444 6452 CONECT 6446 6447 6448 6453 CONECT 6447 6446 CONECT 6448 6441 6446 CONECT 6449 6442 CONECT 6450 6443 6454 CONECT 6451 6440 6444 CONECT 6452 6445 CONECT 6453 6446 CONECT 6454 6450 6455 6465 CONECT 6455 6454 6456 6462 CONECT 6456 6455 6457 6463 CONECT 6457 6456 6458 6464 CONECT 6458 6457 6459 6465 CONECT 6459 6458 6466 CONECT 6460 6461 6462 6467 CONECT 6461 6460 CONECT 6462 6455 6460 CONECT 6463 6456 CONECT 6464 6457 CONECT 6465 6454 6458 CONECT 6466 6459 CONECT 6467 6460 CONECT 6468 4938 6469 6479 CONECT 6469 6468 6470 6476 CONECT 6470 6469 6471 6477 CONECT 6471 6470 6472 6478 CONECT 6472 6471 6473 6479 CONECT 6473 6472 6480 CONECT 6474 6475 6476 6481 CONECT 6475 6474 CONECT 6476 6469 6474 CONECT 6477 6470 CONECT 6478 6471 6482 CONECT 6479 6468 6472 CONECT 6480 6473 CONECT 6481 6474 CONECT 6482 6478 6483 6493 CONECT 6483 6482 6484 6490 CONECT 6484 6483 6485 6491 CONECT 6485 6484 6486 6492 CONECT 6486 6485 6487 6493 CONECT 6487 6486 6494 CONECT 6488 6489 6490 6495 CONECT 6489 6488 CONECT 6490 6483 6488 CONECT 6491 6484 CONECT 6492 6485 CONECT 6493 6482 6486 CONECT 6494 6487 CONECT 6495 6488 CONECT 6496 2484 6497 6507 CONECT 6497 6496 6498 6504 CONECT 6498 6497 6499 6505 CONECT 6499 6498 6500 6506 CONECT 6500 6499 6501 6507 CONECT 6501 6500 6508 CONECT 6502 6503 6504 6509 CONECT 6503 6502 CONECT 6504 6497 6502 CONECT 6505 6498 CONECT 6506 6499 CONECT 6507 6496 6500 CONECT 6508 6501 CONECT 6509 6502 MASTER 201 0 13 34 11 0 0 6 6507 2 199 66 END