data_8I9M # _entry.id 8I9M # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8I9M pdb_00008i9m 10.2210/pdb8i9m/pdb WWPDB D_1300035226 ? ? EMDB EMD-35276 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8I9M _pdbx_database_status.recvd_initial_deposition_date 2023-02-07 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'The RAGE and HMGB1 complex' _pdbx_database_related.db_id EMD-35276 _pdbx_database_related.content_type 'associated EM volume' # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 3 hotorses@pusan.ac.kr 'Chang Woo' Han ? 'principal investigator/group leader' 0000-0001-5125-886X 4 sbjang@pusan.ac.kr 'Se Bok' Jang ? 'principal investigator/group leader' 0000-0002-2266-0937 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Han, C.W.' 1 ? 'Kim, H.J.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'The RAGE and HMGB1 complex' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Han, C.W.' 1 ? primary 'Kim, H.J.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'High mobility group protein B1' 8590.859 1 ? ? ? ? 2 polymer man 'Advanced glycosylation end product-specific receptor' 23068.414 1 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'High mobility group protein 1,HMG-1' 2 'Receptor for advanced glycosylation end products' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR A ? 2 'polypeptide(L)' no no ;AQNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEGIFRCQAM NRNGKETKSNYRVRVYQIPGKPEIVDSASELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRRHPE TGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPRHRALRTAPIQPRVWEPV ; ;AQNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEGIFRCQAM NRNGKETKSNYRVRVYQIPGKPEIVDSASELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRRHPE TGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPRHRALRTAPIQPRVWEPV ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PHE n 1 2 LYS n 1 3 ASP n 1 4 PRO n 1 5 ASN n 1 6 ALA n 1 7 PRO n 1 8 LYS n 1 9 ARG n 1 10 PRO n 1 11 PRO n 1 12 SER n 1 13 ALA n 1 14 PHE n 1 15 PHE n 1 16 LEU n 1 17 PHE n 1 18 CYS n 1 19 SER n 1 20 GLU n 1 21 TYR n 1 22 ARG n 1 23 PRO n 1 24 LYS n 1 25 ILE n 1 26 LYS n 1 27 GLY n 1 28 GLU n 1 29 HIS n 1 30 PRO n 1 31 GLY n 1 32 LEU n 1 33 SER n 1 34 ILE n 1 35 GLY n 1 36 ASP n 1 37 VAL n 1 38 ALA n 1 39 LYS n 1 40 LYS n 1 41 LEU n 1 42 GLY n 1 43 GLU n 1 44 MET n 1 45 TRP n 1 46 ASN n 1 47 ASN n 1 48 THR n 1 49 ALA n 1 50 ALA n 1 51 ASP n 1 52 ASP n 1 53 LYS n 1 54 GLN n 1 55 PRO n 1 56 TYR n 1 57 GLU n 1 58 LYS n 1 59 LYS n 1 60 ALA n 1 61 ALA n 1 62 LYS n 1 63 LEU n 1 64 LYS n 1 65 GLU n 1 66 LYS n 1 67 TYR n 1 68 GLU n 1 69 LYS n 1 70 ASP n 1 71 ILE n 1 72 ALA n 1 73 ALA n 1 74 TYR n 1 75 ARG n 2 1 ALA n 2 2 GLN n 2 3 ASN n 2 4 ILE n 2 5 THR n 2 6 ALA n 2 7 ARG n 2 8 ILE n 2 9 GLY n 2 10 GLU n 2 11 PRO n 2 12 LEU n 2 13 VAL n 2 14 LEU n 2 15 LYS n 2 16 CYS n 2 17 LYS n 2 18 GLY n 2 19 ALA n 2 20 PRO n 2 21 LYS n 2 22 LYS n 2 23 PRO n 2 24 PRO n 2 25 GLN n 2 26 ARG n 2 27 LEU n 2 28 GLU n 2 29 TRP n 2 30 LYS n 2 31 LEU n 2 32 ASN n 2 33 THR n 2 34 GLY n 2 35 ARG n 2 36 THR n 2 37 GLU n 2 38 ALA n 2 39 TRP n 2 40 LYS n 2 41 VAL n 2 42 LEU n 2 43 SER n 2 44 PRO n 2 45 GLN n 2 46 GLY n 2 47 GLY n 2 48 GLY n 2 49 PRO n 2 50 TRP n 2 51 ASP n 2 52 SER n 2 53 VAL n 2 54 ALA n 2 55 ARG n 2 56 VAL n 2 57 LEU n 2 58 PRO n 2 59 ASN n 2 60 GLY n 2 61 SER n 2 62 LEU n 2 63 PHE n 2 64 LEU n 2 65 PRO n 2 66 ALA n 2 67 VAL n 2 68 GLY n 2 69 ILE n 2 70 GLN n 2 71 ASP n 2 72 GLU n 2 73 GLY n 2 74 ILE n 2 75 PHE n 2 76 ARG n 2 77 CYS n 2 78 GLN n 2 79 ALA n 2 80 MET n 2 81 ASN n 2 82 ARG n 2 83 ASN n 2 84 GLY n 2 85 LYS n 2 86 GLU n 2 87 THR n 2 88 LYS n 2 89 SER n 2 90 ASN n 2 91 TYR n 2 92 ARG n 2 93 VAL n 2 94 ARG n 2 95 VAL n 2 96 TYR n 2 97 GLN n 2 98 ILE n 2 99 PRO n 2 100 GLY n 2 101 LYS n 2 102 PRO n 2 103 GLU n 2 104 ILE n 2 105 VAL n 2 106 ASP n 2 107 SER n 2 108 ALA n 2 109 SER n 2 110 GLU n 2 111 LEU n 2 112 THR n 2 113 ALA n 2 114 GLY n 2 115 VAL n 2 116 PRO n 2 117 ASN n 2 118 LYS n 2 119 VAL n 2 120 GLY n 2 121 THR n 2 122 CYS n 2 123 VAL n 2 124 SER n 2 125 GLU n 2 126 GLY n 2 127 SER n 2 128 TYR n 2 129 PRO n 2 130 ALA n 2 131 GLY n 2 132 THR n 2 133 LEU n 2 134 SER n 2 135 TRP n 2 136 HIS n 2 137 LEU n 2 138 ASP n 2 139 GLY n 2 140 LYS n 2 141 PRO n 2 142 LEU n 2 143 VAL n 2 144 PRO n 2 145 ASN n 2 146 GLU n 2 147 LYS n 2 148 GLY n 2 149 VAL n 2 150 SER n 2 151 VAL n 2 152 LYS n 2 153 GLU n 2 154 GLN n 2 155 THR n 2 156 ARG n 2 157 ARG n 2 158 HIS n 2 159 PRO n 2 160 GLU n 2 161 THR n 2 162 GLY n 2 163 LEU n 2 164 PHE n 2 165 THR n 2 166 LEU n 2 167 GLN n 2 168 SER n 2 169 GLU n 2 170 LEU n 2 171 MET n 2 172 VAL n 2 173 THR n 2 174 PRO n 2 175 ALA n 2 176 ARG n 2 177 GLY n 2 178 GLY n 2 179 ASP n 2 180 PRO n 2 181 ARG n 2 182 PRO n 2 183 THR n 2 184 PHE n 2 185 SER n 2 186 CYS n 2 187 SER n 2 188 PHE n 2 189 SER n 2 190 PRO n 2 191 GLY n 2 192 LEU n 2 193 PRO n 2 194 ARG n 2 195 HIS n 2 196 ARG n 2 197 ALA n 2 198 LEU n 2 199 ARG n 2 200 THR n 2 201 ALA n 2 202 PRO n 2 203 ILE n 2 204 GLN n 2 205 PRO n 2 206 ARG n 2 207 VAL n 2 208 TRP n 2 209 GLU n 2 210 PRO n 2 211 VAL n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 75 human ? 'HMGB1, HMG1' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 211 human ? 'AGER, RAGE' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PHE 1 89 89 PHE PHE A . n A 1 2 LYS 2 90 90 LYS LYS A . n A 1 3 ASP 3 91 91 ASP ASP A . n A 1 4 PRO 4 92 92 PRO PRO A . n A 1 5 ASN 5 93 93 ASN ASN A . n A 1 6 ALA 6 94 94 ALA ALA A . n A 1 7 PRO 7 95 95 PRO PRO A . n A 1 8 LYS 8 96 96 LYS LYS A . n A 1 9 ARG 9 97 97 ARG ARG A . n A 1 10 PRO 10 98 98 PRO PRO A . n A 1 11 PRO 11 99 99 PRO PRO A . n A 1 12 SER 12 100 100 SER SER A . n A 1 13 ALA 13 101 101 ALA ALA A . n A 1 14 PHE 14 102 102 PHE PHE A . n A 1 15 PHE 15 103 103 PHE PHE A . n A 1 16 LEU 16 104 104 LEU LEU A . n A 1 17 PHE 17 105 105 PHE PHE A . n A 1 18 CYS 18 106 106 CYS CYS A . n A 1 19 SER 19 107 107 SER SER A . n A 1 20 GLU 20 108 108 GLU GLU A . n A 1 21 TYR 21 109 109 TYR TYR A . n A 1 22 ARG 22 110 110 ARG ARG A . n A 1 23 PRO 23 111 111 PRO PRO A . n A 1 24 LYS 24 112 112 LYS LYS A . n A 1 25 ILE 25 113 113 ILE ILE A . n A 1 26 LYS 26 114 114 LYS LYS A . n A 1 27 GLY 27 115 115 GLY GLY A . n A 1 28 GLU 28 116 116 GLU GLU A . n A 1 29 HIS 29 117 117 HIS HIS A . n A 1 30 PRO 30 118 118 PRO PRO A . n A 1 31 GLY 31 119 119 GLY GLY A . n A 1 32 LEU 32 120 120 LEU LEU A . n A 1 33 SER 33 121 121 SER SER A . n A 1 34 ILE 34 122 122 ILE ILE A . n A 1 35 GLY 35 123 123 GLY GLY A . n A 1 36 ASP 36 124 124 ASP ASP A . n A 1 37 VAL 37 125 125 VAL VAL A . n A 1 38 ALA 38 126 126 ALA ALA A . n A 1 39 LYS 39 127 127 LYS LYS A . n A 1 40 LYS 40 128 128 LYS LYS A . n A 1 41 LEU 41 129 129 LEU LEU A . n A 1 42 GLY 42 130 130 GLY GLY A . n A 1 43 GLU 43 131 131 GLU GLU A . n A 1 44 MET 44 132 132 MET MET A . n A 1 45 TRP 45 133 133 TRP TRP A . n A 1 46 ASN 46 134 134 ASN ASN A . n A 1 47 ASN 47 135 135 ASN ASN A . n A 1 48 THR 48 136 136 THR THR A . n A 1 49 ALA 49 137 137 ALA ALA A . n A 1 50 ALA 50 138 138 ALA ALA A . n A 1 51 ASP 51 139 139 ASP ASP A . n A 1 52 ASP 52 140 140 ASP ASP A . n A 1 53 LYS 53 141 141 LYS LYS A . n A 1 54 GLN 54 142 142 GLN GLN A . n A 1 55 PRO 55 143 143 PRO PRO A . n A 1 56 TYR 56 144 144 TYR TYR A . n A 1 57 GLU 57 145 145 GLU GLU A . n A 1 58 LYS 58 146 146 LYS LYS A . n A 1 59 LYS 59 147 147 LYS LYS A . n A 1 60 ALA 60 148 148 ALA ALA A . n A 1 61 ALA 61 149 149 ALA ALA A . n A 1 62 LYS 62 150 150 LYS LYS A . n A 1 63 LEU 63 151 151 LEU LEU A . n A 1 64 LYS 64 152 152 LYS LYS A . n A 1 65 GLU 65 153 153 GLU GLU A . n A 1 66 LYS 66 154 154 LYS LYS A . n A 1 67 TYR 67 155 155 TYR TYR A . n A 1 68 GLU 68 156 156 GLU GLU A . n A 1 69 LYS 69 157 157 LYS LYS A . n A 1 70 ASP 70 158 158 ASP ASP A . n A 1 71 ILE 71 159 159 ILE ILE A . n A 1 72 ALA 72 160 160 ALA ALA A . n A 1 73 ALA 73 161 161 ALA ALA A . n A 1 74 TYR 74 162 162 TYR TYR A . n A 1 75 ARG 75 163 163 ARG ARG A . n B 2 1 ALA 1 23 23 ALA ALA B . n B 2 2 GLN 2 24 24 GLN GLN B . n B 2 3 ASN 3 25 25 ASN ASN B . n B 2 4 ILE 4 26 26 ILE ILE B . n B 2 5 THR 5 27 27 THR THR B . n B 2 6 ALA 6 28 28 ALA ALA B . n B 2 7 ARG 7 29 29 ARG ARG B . n B 2 8 ILE 8 30 30 ILE ILE B . n B 2 9 GLY 9 31 31 GLY GLY B . n B 2 10 GLU 10 32 32 GLU GLU B . n B 2 11 PRO 11 33 33 PRO PRO B . n B 2 12 LEU 12 34 34 LEU LEU B . n B 2 13 VAL 13 35 35 VAL VAL B . n B 2 14 LEU 14 36 36 LEU LEU B . n B 2 15 LYS 15 37 37 LYS LYS B . n B 2 16 CYS 16 38 38 CYS CYS B . n B 2 17 LYS 17 39 39 LYS LYS B . n B 2 18 GLY 18 40 40 GLY GLY B . n B 2 19 ALA 19 41 41 ALA ALA B . n B 2 20 PRO 20 42 42 PRO PRO B . n B 2 21 LYS 21 43 43 LYS LYS B . n B 2 22 LYS 22 44 44 LYS LYS B . n B 2 23 PRO 23 45 45 PRO PRO B . n B 2 24 PRO 24 46 46 PRO PRO B . n B 2 25 GLN 25 47 47 GLN GLN B . n B 2 26 ARG 26 48 48 ARG ARG B . n B 2 27 LEU 27 49 49 LEU LEU B . n B 2 28 GLU 28 50 50 GLU GLU B . n B 2 29 TRP 29 51 51 TRP TRP B . n B 2 30 LYS 30 52 52 LYS LYS B . n B 2 31 LEU 31 53 53 LEU LEU B . n B 2 32 ASN 32 54 54 ASN ASN B . n B 2 33 THR 33 55 55 THR THR B . n B 2 34 GLY 34 56 56 GLY GLY B . n B 2 35 ARG 35 57 57 ARG ARG B . n B 2 36 THR 36 58 58 THR THR B . n B 2 37 GLU 37 59 59 GLU GLU B . n B 2 38 ALA 38 60 60 ALA ALA B . n B 2 39 TRP 39 61 61 TRP TRP B . n B 2 40 LYS 40 62 62 LYS LYS B . n B 2 41 VAL 41 63 63 VAL VAL B . n B 2 42 LEU 42 64 64 LEU LEU B . n B 2 43 SER 43 65 65 SER SER B . n B 2 44 PRO 44 66 66 PRO PRO B . n B 2 45 GLN 45 67 67 GLN GLN B . n B 2 46 GLY 46 68 68 GLY GLY B . n B 2 47 GLY 47 69 69 GLY GLY B . n B 2 48 GLY 48 70 70 GLY GLY B . n B 2 49 PRO 49 71 71 PRO PRO B . n B 2 50 TRP 50 72 72 TRP TRP B . n B 2 51 ASP 51 73 73 ASP ASP B . n B 2 52 SER 52 74 74 SER SER B . n B 2 53 VAL 53 75 75 VAL VAL B . n B 2 54 ALA 54 76 76 ALA ALA B . n B 2 55 ARG 55 77 77 ARG ARG B . n B 2 56 VAL 56 78 78 VAL VAL B . n B 2 57 LEU 57 79 79 LEU LEU B . n B 2 58 PRO 58 80 80 PRO PRO B . n B 2 59 ASN 59 81 81 ASN ASN B . n B 2 60 GLY 60 82 82 GLY GLY B . n B 2 61 SER 61 83 83 SER SER B . n B 2 62 LEU 62 84 84 LEU LEU B . n B 2 63 PHE 63 85 85 PHE PHE B . n B 2 64 LEU 64 86 86 LEU LEU B . n B 2 65 PRO 65 87 87 PRO PRO B . n B 2 66 ALA 66 88 88 ALA ALA B . n B 2 67 VAL 67 89 89 VAL VAL B . n B 2 68 GLY 68 90 90 GLY GLY B . n B 2 69 ILE 69 91 91 ILE ILE B . n B 2 70 GLN 70 92 92 GLN GLN B . n B 2 71 ASP 71 93 93 ASP ASP B . n B 2 72 GLU 72 94 94 GLU GLU B . n B 2 73 GLY 73 95 95 GLY GLY B . n B 2 74 ILE 74 96 96 ILE ILE B . n B 2 75 PHE 75 97 97 PHE PHE B . n B 2 76 ARG 76 98 98 ARG ARG B . n B 2 77 CYS 77 99 99 CYS CYS B . n B 2 78 GLN 78 100 100 GLN GLN B . n B 2 79 ALA 79 101 101 ALA ALA B . n B 2 80 MET 80 102 102 MET MET B . n B 2 81 ASN 81 103 103 ASN ASN B . n B 2 82 ARG 82 104 104 ARG ARG B . n B 2 83 ASN 83 105 105 ASN ASN B . n B 2 84 GLY 84 106 106 GLY GLY B . n B 2 85 LYS 85 107 107 LYS LYS B . n B 2 86 GLU 86 108 108 GLU GLU B . n B 2 87 THR 87 109 109 THR THR B . n B 2 88 LYS 88 110 110 LYS LYS B . n B 2 89 SER 89 111 111 SER SER B . n B 2 90 ASN 90 112 112 ASN ASN B . n B 2 91 TYR 91 113 113 TYR TYR B . n B 2 92 ARG 92 114 114 ARG ARG B . n B 2 93 VAL 93 115 115 VAL VAL B . n B 2 94 ARG 94 116 116 ARG ARG B . n B 2 95 VAL 95 117 117 VAL VAL B . n B 2 96 TYR 96 118 118 TYR TYR B . n B 2 97 GLN 97 119 119 GLN GLN B . n B 2 98 ILE 98 120 120 ILE ILE B . n B 2 99 PRO 99 121 121 PRO PRO B . n B 2 100 GLY 100 122 122 GLY GLY B . n B 2 101 LYS 101 123 123 LYS LYS B . n B 2 102 PRO 102 124 124 PRO PRO B . n B 2 103 GLU 103 125 125 GLU GLU B . n B 2 104 ILE 104 126 126 ILE ILE B . n B 2 105 VAL 105 127 127 VAL VAL B . n B 2 106 ASP 106 128 128 ASP ASP B . n B 2 107 SER 107 129 129 SER SER B . n B 2 108 ALA 108 130 130 ALA ALA B . n B 2 109 SER 109 131 131 SER SER B . n B 2 110 GLU 110 132 132 GLU GLU B . n B 2 111 LEU 111 133 133 LEU LEU B . n B 2 112 THR 112 134 134 THR THR B . n B 2 113 ALA 113 135 135 ALA ALA B . n B 2 114 GLY 114 136 136 GLY GLY B . n B 2 115 VAL 115 137 137 VAL VAL B . n B 2 116 PRO 116 138 138 PRO PRO B . n B 2 117 ASN 117 139 139 ASN ASN B . n B 2 118 LYS 118 140 140 LYS LYS B . n B 2 119 VAL 119 141 141 VAL VAL B . n B 2 120 GLY 120 142 142 GLY GLY B . n B 2 121 THR 121 143 143 THR THR B . n B 2 122 CYS 122 144 144 CYS CYS B . n B 2 123 VAL 123 145 145 VAL VAL B . n B 2 124 SER 124 146 146 SER SER B . n B 2 125 GLU 125 147 147 GLU GLU B . n B 2 126 GLY 126 148 148 GLY GLY B . n B 2 127 SER 127 149 149 SER SER B . n B 2 128 TYR 128 150 150 TYR TYR B . n B 2 129 PRO 129 151 151 PRO PRO B . n B 2 130 ALA 130 152 152 ALA ALA B . n B 2 131 GLY 131 153 153 GLY GLY B . n B 2 132 THR 132 154 154 THR THR B . n B 2 133 LEU 133 155 155 LEU LEU B . n B 2 134 SER 134 156 156 SER SER B . n B 2 135 TRP 135 157 157 TRP TRP B . n B 2 136 HIS 136 158 158 HIS HIS B . n B 2 137 LEU 137 159 159 LEU LEU B . n B 2 138 ASP 138 160 160 ASP ASP B . n B 2 139 GLY 139 161 161 GLY GLY B . n B 2 140 LYS 140 162 162 LYS LYS B . n B 2 141 PRO 141 163 163 PRO PRO B . n B 2 142 LEU 142 164 164 LEU LEU B . n B 2 143 VAL 143 165 165 VAL VAL B . n B 2 144 PRO 144 166 166 PRO PRO B . n B 2 145 ASN 145 167 167 ASN ASN B . n B 2 146 GLU 146 168 168 GLU GLU B . n B 2 147 LYS 147 169 169 LYS LYS B . n B 2 148 GLY 148 170 170 GLY GLY B . n B 2 149 VAL 149 171 171 VAL VAL B . n B 2 150 SER 150 172 172 SER SER B . n B 2 151 VAL 151 173 173 VAL VAL B . n B 2 152 LYS 152 174 174 LYS LYS B . n B 2 153 GLU 153 175 175 GLU GLU B . n B 2 154 GLN 154 176 176 GLN GLN B . n B 2 155 THR 155 177 177 THR THR B . n B 2 156 ARG 156 178 178 ARG ARG B . n B 2 157 ARG 157 179 179 ARG ARG B . n B 2 158 HIS 158 180 180 HIS HIS B . n B 2 159 PRO 159 181 181 PRO PRO B . n B 2 160 GLU 160 182 182 GLU GLU B . n B 2 161 THR 161 183 183 THR THR B . n B 2 162 GLY 162 184 184 GLY GLY B . n B 2 163 LEU 163 185 185 LEU LEU B . n B 2 164 PHE 164 186 186 PHE PHE B . n B 2 165 THR 165 187 187 THR THR B . n B 2 166 LEU 166 188 188 LEU LEU B . n B 2 167 GLN 167 189 189 GLN GLN B . n B 2 168 SER 168 190 190 SER SER B . n B 2 169 GLU 169 191 191 GLU GLU B . n B 2 170 LEU 170 192 192 LEU LEU B . n B 2 171 MET 171 193 193 MET MET B . n B 2 172 VAL 172 194 194 VAL VAL B . n B 2 173 THR 173 195 195 THR THR B . n B 2 174 PRO 174 196 196 PRO PRO B . n B 2 175 ALA 175 197 197 ALA ALA B . n B 2 176 ARG 176 198 198 ARG ARG B . n B 2 177 GLY 177 199 199 GLY GLY B . n B 2 178 GLY 178 200 200 GLY GLY B . n B 2 179 ASP 179 201 201 ASP ASP B . n B 2 180 PRO 180 202 202 PRO PRO B . n B 2 181 ARG 181 203 203 ARG ARG B . n B 2 182 PRO 182 204 204 PRO PRO B . n B 2 183 THR 183 205 205 THR THR B . n B 2 184 PHE 184 206 206 PHE PHE B . n B 2 185 SER 185 207 207 SER SER B . n B 2 186 CYS 186 208 208 CYS CYS B . n B 2 187 SER 187 209 209 SER SER B . n B 2 188 PHE 188 210 210 PHE PHE B . n B 2 189 SER 189 211 211 SER SER B . n B 2 190 PRO 190 212 212 PRO PRO B . n B 2 191 GLY 191 213 213 GLY GLY B . n B 2 192 LEU 192 214 214 LEU LEU B . n B 2 193 PRO 193 215 215 PRO PRO B . n B 2 194 ARG 194 216 216 ARG ARG B . n B 2 195 HIS 195 217 217 HIS HIS B . n B 2 196 ARG 196 218 218 ARG ARG B . n B 2 197 ALA 197 219 219 ALA ALA B . n B 2 198 LEU 198 220 220 LEU LEU B . n B 2 199 ARG 199 221 221 ARG ARG B . n B 2 200 THR 200 222 222 THR THR B . n B 2 201 ALA 201 223 223 ALA ALA B . n B 2 202 PRO 202 224 224 PRO PRO B . n B 2 203 ILE 203 225 225 ILE ILE B . n B 2 204 GLN 204 226 226 GLN GLN B . n B 2 205 PRO 205 227 227 PRO PRO B . n B 2 206 ARG 206 228 228 ARG ARG B . n B 2 207 VAL 207 229 229 VAL VAL B . n B 2 208 TRP 208 230 230 TRP TRP B . n B 2 209 GLU 209 231 231 GLU GLU B . n B 2 210 PRO 210 232 232 PRO PRO B . n B 2 211 VAL 211 233 233 VAL VAL B . n # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? phenix.real_space_refine ? ? ? 1.14_3260 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.14_3260 2 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8I9M _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8I9M _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8I9M _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8I9M _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high . _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.0145 ? 2289 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 2.3121 ? 3103 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.1215 ? 324 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.0181 ? 409 ? f_plane_restr ? ? 'ELECTRON MICROSCOPY' ? 13.4655 ? 1408 ? f_dihedral_angle_d ? ? # _struct.entry_id 8I9M _struct.title 'The RAGE and HMGB1 complex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8I9M _struct_keywords.text 'RAGE, HMGB1, Inflammation, IMMUNE SYSTEM' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP HMGB1_HUMAN P09429 ? 1 FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 89 2 UNP RAGE_HUMAN Q15109 ? 2 ;AQNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEGIFRCQAM NRNGKETKSNYRVRVYQIPGKPEIVDSASELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRRHPE TGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPRHRALRTAPIQPRVWEPV ; 23 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8I9M A 1 ? 75 ? P09429 89 ? 163 ? 89 163 2 2 8I9M B 1 ? 211 ? Q15109 23 ? 233 ? 23 233 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details ;1 copy of chain A 1 copy of chain B ; # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 33 ? ALA A 38 ? SER A 121 ALA A 126 5 ? 6 HELX_P HELX_P2 AA2 GLU A 43 ? THR A 48 ? GLU A 131 THR A 136 5 ? 6 HELX_P HELX_P3 AA3 GLY B 47 ? ASP B 51 ? GLY B 69 ASP B 73 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? B CYS 16 SG ? ? ? 1_555 B CYS 77 SG ? ? B CYS 38 B CYS 99 1_555 ? ? ? ? ? ? ? 2.016 ? ? disulf2 disulf ? ? B CYS 122 SG ? ? ? 1_555 B CYS 186 SG ? ? B CYS 144 B CYS 208 1_555 ? ? ? ? ? ? ? 2.021 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PRO 23 B . ? PRO 45 B PRO 24 B ? PRO 46 B 1 -13.40 2 TYR 128 B . ? TYR 150 B PRO 129 B ? PRO 151 B 1 -5.55 # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PHE B 75 ? ARG B 76 ? PHE B 97 ARG B 98 AA1 2 GLU B 86 ? THR B 87 ? GLU B 108 THR B 109 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id PHE _pdbx_struct_sheet_hbond.range_1_label_asym_id B _pdbx_struct_sheet_hbond.range_1_label_seq_id 75 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id PHE _pdbx_struct_sheet_hbond.range_1_auth_asym_id B _pdbx_struct_sheet_hbond.range_1_auth_seq_id 97 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id THR _pdbx_struct_sheet_hbond.range_2_label_asym_id B _pdbx_struct_sheet_hbond.range_2_label_seq_id 87 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id THR _pdbx_struct_sheet_hbond.range_2_auth_asym_id B _pdbx_struct_sheet_hbond.range_2_auth_seq_id 109 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CB _pdbx_validate_rmsd_bond.auth_asym_id_1 B _pdbx_validate_rmsd_bond.auth_comp_id_1 CYS _pdbx_validate_rmsd_bond.auth_seq_id_1 38 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 SG _pdbx_validate_rmsd_bond.auth_asym_id_2 B _pdbx_validate_rmsd_bond.auth_comp_id_2 CYS _pdbx_validate_rmsd_bond.auth_seq_id_2 38 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.679 _pdbx_validate_rmsd_bond.bond_target_value 1.812 _pdbx_validate_rmsd_bond.bond_deviation -0.133 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.016 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA B LEU 34 ? ? CB B LEU 34 ? ? CG B LEU 34 ? ? 135.30 115.30 20.00 2.30 N 2 1 CA B LEU 49 ? ? CB B LEU 49 ? ? CG B LEU 49 ? ? 142.13 115.30 26.83 2.30 N 3 1 CA B GLU 94 ? ? CB B GLU 94 ? ? CG B GLU 94 ? ? 126.82 113.40 13.42 2.20 N 4 1 C B GLY 122 ? ? N B LYS 123 ? ? CA B LYS 123 ? ? 152.82 121.70 31.12 2.50 Y 5 1 CA B LEU 133 ? ? CB B LEU 133 ? ? CG B LEU 133 ? ? 131.43 115.30 16.13 2.30 N 6 1 CA B LEU 159 ? ? CB B LEU 159 ? ? CG B LEU 159 ? ? 99.77 115.30 -15.53 2.30 N 7 1 CB B LEU 185 ? ? CG B LEU 185 ? ? CD2 B LEU 185 ? ? 98.07 111.00 -12.93 1.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 96 ? ? -69.58 -177.92 2 1 ASN A 134 ? ? -88.87 33.31 3 1 ASP A 139 ? ? -94.76 -62.50 4 1 ASP A 140 ? ? -143.75 45.13 5 1 ALA A 148 ? ? -161.87 112.41 6 1 ALA B 28 ? ? -159.21 -153.95 7 1 ARG B 29 ? ? -76.44 -167.08 8 1 LEU B 36 ? ? -72.24 -165.51 9 1 LYS B 37 ? ? -60.78 74.37 10 1 PRO B 46 ? ? -87.90 -137.34 11 1 ARG B 48 ? ? -152.55 5.55 12 1 LEU B 49 ? ? -145.37 -144.94 13 1 TRP B 51 ? ? -151.71 87.16 14 1 LYS B 52 ? ? -75.24 -148.78 15 1 ASN B 54 ? ? 88.82 34.13 16 1 LYS B 62 ? ? -156.97 -158.19 17 1 SER B 74 ? ? -43.88 -70.19 18 1 GLN B 100 ? ? -100.10 77.82 19 1 MET B 102 ? ? -50.70 97.77 20 1 ASN B 103 ? ? -102.77 -68.08 21 1 ARG B 104 ? ? -142.24 -39.52 22 1 GLN B 119 ? ? -149.01 -156.48 23 1 LYS B 123 ? ? -41.53 155.53 24 1 ASP B 128 ? ? 62.54 80.71 25 1 SER B 131 ? ? -109.75 -61.00 26 1 SER B 146 ? ? -177.27 -173.03 27 1 SER B 149 ? ? -173.86 -161.29 28 1 ALA B 152 ? ? -56.01 -71.68 29 1 THR B 154 ? ? -125.21 -160.42 30 1 LEU B 159 ? ? -33.78 117.83 31 1 ASP B 160 ? ? 54.18 77.60 32 1 ASN B 167 ? ? 61.35 68.05 33 1 LYS B 169 ? ? 65.75 -0.03 34 1 LEU B 185 ? ? -143.17 14.51 35 1 THR B 187 ? ? -147.16 -152.86 36 1 MET B 193 ? ? -91.91 56.66 37 1 PRO B 202 ? ? -64.36 78.30 38 1 ARG B 203 ? ? -154.89 52.53 39 1 THR B 205 ? ? -39.13 145.19 40 1 PHE B 206 ? ? -165.61 113.51 41 1 SER B 207 ? ? -167.17 119.63 42 1 SER B 211 ? ? -47.60 154.71 43 1 PRO B 215 ? ? -80.64 46.20 44 1 THR B 222 ? ? -144.96 -153.29 45 1 PRO B 224 ? ? -69.22 -171.57 46 1 PRO B 232 ? ? -90.85 47.01 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 PHE A 89 ? ? LYS A 90 ? ? -141.07 2 1 ASP A 91 ? ? PRO A 92 ? ? -145.33 3 1 ASN A 93 ? ? ALA A 94 ? ? -147.79 4 1 ALA A 94 ? ? PRO A 95 ? ? -137.18 5 1 ARG A 97 ? ? PRO A 98 ? ? -135.77 6 1 ARG A 110 ? ? PRO A 111 ? ? -130.29 7 1 GLU A 116 ? ? HIS A 117 ? ? -149.75 8 1 GLY A 130 ? ? GLU A 131 ? ? -148.81 9 1 GLN A 142 ? ? PRO A 143 ? ? -149.50 10 1 LYS A 150 ? ? LEU A 151 ? ? -140.22 11 1 LYS A 152 ? ? GLU A 153 ? ? -121.13 12 1 ALA B 28 ? ? ARG B 29 ? ? -138.24 13 1 ARG B 29 ? ? ILE B 30 ? ? -114.75 14 1 ILE B 30 ? ? GLY B 31 ? ? 146.44 15 1 LEU B 34 ? ? VAL B 35 ? ? 146.39 16 1 LEU B 36 ? ? LYS B 37 ? ? -128.78 17 1 PRO B 42 ? ? LYS B 43 ? ? -143.08 18 1 PRO B 46 ? ? GLN B 47 ? ? -132.06 19 1 TRP B 51 ? ? LYS B 52 ? ? -124.91 20 1 LYS B 52 ? ? LEU B 53 ? ? -127.71 21 1 ASN B 54 ? ? THR B 55 ? ? 148.44 22 1 ALA B 60 ? ? TRP B 61 ? ? -137.58 23 1 SER B 65 ? ? PRO B 66 ? ? 143.66 24 1 ALA B 76 ? ? ARG B 77 ? ? 147.53 25 1 LEU B 84 ? ? PHE B 85 ? ? -143.44 26 1 PRO B 87 ? ? ALA B 88 ? ? -146.29 27 1 ARG B 98 ? ? CYS B 99 ? ? -149.67 28 1 ALA B 101 ? ? MET B 102 ? ? -138.07 29 1 MET B 102 ? ? ASN B 103 ? ? 143.01 30 1 ASN B 103 ? ? ARG B 104 ? ? 137.93 31 1 ARG B 104 ? ? ASN B 105 ? ? -142.96 32 1 ASN B 105 ? ? GLY B 106 ? ? -30.25 33 1 GLY B 106 ? ? LYS B 107 ? ? -149.18 34 1 GLY B 142 ? ? THR B 143 ? ? -136.54 35 1 CYS B 144 ? ? VAL B 145 ? ? -146.14 36 1 VAL B 145 ? ? SER B 146 ? ? 146.57 37 1 HIS B 158 ? ? LEU B 159 ? ? -118.05 38 1 LEU B 159 ? ? ASP B 160 ? ? 145.95 39 1 ASP B 160 ? ? GLY B 161 ? ? 145.82 40 1 GLU B 191 ? ? LEU B 192 ? ? -147.16 41 1 ARG B 203 ? ? PRO B 204 ? ? 146.35 42 1 CYS B 208 ? ? SER B 209 ? ? -144.54 43 1 THR B 222 ? ? ALA B 223 ? ? -149.52 44 1 ILE B 225 ? ? GLN B 226 ? ? -141.21 # _space_group_symop.id 1 _space_group_symop.operation_xyz x,y,z # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8I9M _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 8I9M _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 5.19 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 121467 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 8.0 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'The RAGE and HMGB1 complex' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list '1, 2' # _em_imaging.entry_id 8I9M _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS GLACIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 200 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'DARK FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 1800 _em_imaging.nominal_defocus_max 3000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material GOLD _em_sample_support.grid_mesh_size 200 _em_sample_support.grid_type 'Quantifoil R2/2' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 8I9M _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name NITROGEN _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8I9M _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag YES _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.50 # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 562 _em_entity_assembly_recombinant.organism 'Escherichia coli' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 39.99 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'FEI FALCON III (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? 'VOLUME SELECTION' ? 14 1 1 1 ? ? 'SERIES ALIGNMENT' ? 15 1 1 1 ? ? 'MOLECULAR REPLACEMENT' ? 16 1 1 1 ? ? 'LATTICE DISTORTION CORRECTION' ? 17 1 1 1 ? ? 'SYMMETRY DETERMINATION' ? 18 1 1 1 ? ? 'CRYSTALLOGRAPHY MERGING' ? 19 1 1 1 ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _space_group.crystal_system triclinic _space_group.name_H-M_alt 'P 1' _space_group.IT_number 1 _space_group.name_Hall 'P 1' _space_group.id 1 # _atom_sites.entry_id 8I9M _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_