HEADER OXIDOREDUCTASE 08-FEB-23 8IAG TITLE CRYSTAL STRUCTURE OF RDCAUPO A161C MUTANT FROM DALDINIA CALDARIORUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: RDCAUPO; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DALDINIA CALDARIORUM; SOURCE 3 ORGANISM_TAXID: 326644; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RDCAUPO, DALDINIA CALDARIORUM, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR T.LI,Y.WANG REVDAT 1 13-MAR-24 8IAG 0 JRNL AUTH T.LI,Y.WANG JRNL TITL CRYSTAL STRUCTURE OF RDCAUPO A161C MUTANT FROM DALDINIA JRNL TITL 2 CALDARIORUM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692+SVN REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.04 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.348 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 77167 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.143 REMARK 3 R VALUE (WORKING SET) : 0.143 REMARK 3 FREE R VALUE : 0.155 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.461 REMARK 3 FREE R VALUE TEST SET COUNT : 1899 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.0400 - 3.6144 1.00 5626 142 0.1418 0.1414 REMARK 3 2 3.6144 - 2.8691 1.00 5454 137 0.1360 0.1577 REMARK 3 3 2.8691 - 2.5065 1.00 5420 137 0.1457 0.1694 REMARK 3 4 2.5065 - 2.2773 1.00 5376 136 0.1423 0.1643 REMARK 3 5 2.2773 - 2.1141 1.00 5381 136 0.1387 0.1413 REMARK 3 6 2.1141 - 1.9895 1.00 5373 136 0.1357 0.1624 REMARK 3 7 1.9895 - 1.8898 1.00 5366 135 0.1316 0.1326 REMARK 3 8 1.8898 - 1.8076 1.00 5361 135 0.1422 0.1441 REMARK 3 9 1.8076 - 1.7380 1.00 5337 134 0.1524 0.1521 REMARK 3 10 1.7380 - 1.6780 1.00 5291 134 0.1512 0.1778 REMARK 3 11 1.6780 - 1.6256 1.00 5344 135 0.1444 0.1446 REMARK 3 12 1.6256 - 1.5791 1.00 5359 135 0.1485 0.1927 REMARK 3 13 1.5791 - 1.5375 1.00 5303 134 0.1641 0.1803 REMARK 3 14 1.5375 - 1.5000 0.99 5277 133 0.1932 0.1967 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.103 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 14.404 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3717 REMARK 3 ANGLE : 1.210 5092 REMARK 3 CHIRALITY : 0.049 546 REMARK 3 PLANARITY : 0.006 654 REMARK 3 DIHEDRAL : 15.623 1311 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 52 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.9513 -3.4770 -13.3958 REMARK 3 T TENSOR REMARK 3 T11: 0.1503 T22: 0.1111 REMARK 3 T33: 0.1375 T12: -0.0134 REMARK 3 T13: -0.0053 T23: 0.0176 REMARK 3 L TENSOR REMARK 3 L11: 1.6351 L22: 2.3007 REMARK 3 L33: 2.2263 L12: -0.2885 REMARK 3 L13: 0.4009 L23: -0.1485 REMARK 3 S TENSOR REMARK 3 S11: 0.0577 S12: -0.1001 S13: -0.1196 REMARK 3 S21: 0.1166 S22: 0.0180 S23: 0.0888 REMARK 3 S31: 0.1785 S32: -0.0809 S33: -0.0623 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 53 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.4920 -2.4618 -20.5151 REMARK 3 T TENSOR REMARK 3 T11: 0.1666 T22: 0.1985 REMARK 3 T33: 0.1879 T12: 0.0487 REMARK 3 T13: 0.0076 T23: 0.0223 REMARK 3 L TENSOR REMARK 3 L11: 2.3863 L22: 6.6029 REMARK 3 L33: 5.3475 L12: 2.3652 REMARK 3 L13: 2.1735 L23: 3.4084 REMARK 3 S TENSOR REMARK 3 S11: 0.0768 S12: 0.1799 S13: -0.1748 REMARK 3 S21: -0.0826 S22: 0.1355 S23: -0.4151 REMARK 3 S31: 0.2700 S32: 0.2833 S33: -0.2029 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 67 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.4805 11.4254 -24.7745 REMARK 3 T TENSOR REMARK 3 T11: 0.1133 T22: 0.1329 REMARK 3 T33: 0.1386 T12: 0.0086 REMARK 3 T13: 0.0100 T23: -0.0036 REMARK 3 L TENSOR REMARK 3 L11: 0.4254 L22: 0.8808 REMARK 3 L33: 1.7379 L12: -0.1772 REMARK 3 L13: 0.5710 L23: -0.3723 REMARK 3 S TENSOR REMARK 3 S11: 0.0108 S12: 0.0321 S13: 0.0025 REMARK 3 S21: -0.0194 S22: -0.0125 S23: -0.0495 REMARK 3 S31: -0.0074 S32: 0.0673 S33: 0.0111 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 167 THROUGH 202 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.3141 -3.8062 -27.3066 REMARK 3 T TENSOR REMARK 3 T11: 0.1914 T22: 0.1149 REMARK 3 T33: 0.1925 T12: -0.0238 REMARK 3 T13: -0.0508 T23: 0.0134 REMARK 3 L TENSOR REMARK 3 L11: 2.1311 L22: 1.6047 REMARK 3 L33: 2.4477 L12: 0.0033 REMARK 3 L13: 0.2165 L23: -0.1697 REMARK 3 S TENSOR REMARK 3 S11: 0.1412 S12: 0.0462 S13: -0.1789 REMARK 3 S21: -0.1936 S22: 0.0161 S23: 0.1259 REMARK 3 S31: 0.2669 S32: -0.1785 S33: -0.1246 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 203 THROUGH 224 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.4068 7.0635 -37.7854 REMARK 3 T TENSOR REMARK 3 T11: 0.2484 T22: 0.2501 REMARK 3 T33: 0.2089 T12: 0.0278 REMARK 3 T13: 0.0305 T23: -0.0117 REMARK 3 L TENSOR REMARK 3 L11: 3.0075 L22: 7.1906 REMARK 3 L33: 4.2259 L12: -2.6822 REMARK 3 L13: 1.4489 L23: -3.1707 REMARK 3 S TENSOR REMARK 3 S11: 0.0571 S12: 0.2220 S13: 0.2716 REMARK 3 S21: -0.1971 S22: -0.3298 S23: -0.5651 REMARK 3 S31: -0.1510 S32: 0.3901 S33: 0.2165 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 4 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.4763 -22.1124 1.8599 REMARK 3 T TENSOR REMARK 3 T11: 0.1082 T22: 0.1602 REMARK 3 T33: 0.1126 T12: 0.0028 REMARK 3 T13: -0.0136 T23: -0.0218 REMARK 3 L TENSOR REMARK 3 L11: 1.2279 L22: 2.4115 REMARK 3 L33: 1.5748 L12: -0.2900 REMARK 3 L13: -0.2030 L23: 0.4218 REMARK 3 S TENSOR REMARK 3 S11: -0.0115 S12: -0.0916 S13: 0.0326 REMARK 3 S21: 0.0866 S22: 0.0535 S23: -0.1651 REMARK 3 S31: -0.0077 S32: 0.2506 S33: -0.0371 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 67 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.6541 -18.2378 -5.5951 REMARK 3 T TENSOR REMARK 3 T11: 0.1274 T22: 0.1569 REMARK 3 T33: 0.1438 T12: 0.0236 REMARK 3 T13: 0.0042 T23: -0.0144 REMARK 3 L TENSOR REMARK 3 L11: 0.4355 L22: 1.6511 REMARK 3 L33: 1.8732 L12: 0.1854 REMARK 3 L13: 0.3681 L23: 0.7386 REMARK 3 S TENSOR REMARK 3 S11: 0.0038 S12: -0.0259 S13: 0.0864 REMARK 3 S21: -0.0240 S22: -0.0938 S23: 0.1659 REMARK 3 S31: -0.1064 S32: -0.1652 S33: 0.0988 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 107 THROUGH 120 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.0319 -38.8165 -12.4786 REMARK 3 T TENSOR REMARK 3 T11: 0.1933 T22: 0.1269 REMARK 3 T33: 0.1447 T12: -0.0170 REMARK 3 T13: 0.0128 T23: -0.0008 REMARK 3 L TENSOR REMARK 3 L11: 5.1607 L22: 1.9245 REMARK 3 L33: 2.7520 L12: -1.4608 REMARK 3 L13: 0.1306 L23: 0.9679 REMARK 3 S TENSOR REMARK 3 S11: -0.0566 S12: -0.0507 S13: -0.2223 REMARK 3 S21: 0.1551 S22: 0.0560 S23: 0.1950 REMARK 3 S31: 0.3467 S32: -0.0672 S33: 0.0155 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 121 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.9479 -28.3836 -17.4244 REMARK 3 T TENSOR REMARK 3 T11: 0.1198 T22: 0.1215 REMARK 3 T33: 0.1176 T12: 0.0051 REMARK 3 T13: 0.0082 T23: -0.0103 REMARK 3 L TENSOR REMARK 3 L11: 1.5807 L22: 1.1201 REMARK 3 L33: 1.4020 L12: 0.0725 REMARK 3 L13: 0.3765 L23: 0.2992 REMARK 3 S TENSOR REMARK 3 S11: -0.0347 S12: -0.0502 S13: 0.0874 REMARK 3 S21: -0.0722 S22: 0.0085 S23: 0.0502 REMARK 3 S31: -0.0661 S32: -0.0290 S33: 0.0208 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 167 THROUGH 202 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.1019 -36.9040 -4.6697 REMARK 3 T TENSOR REMARK 3 T11: 0.1629 T22: 0.1623 REMARK 3 T33: 0.1411 T12: 0.0496 REMARK 3 T13: -0.0197 T23: 0.0117 REMARK 3 L TENSOR REMARK 3 L11: 2.1247 L22: 2.0011 REMARK 3 L33: 2.2581 L12: 0.3246 REMARK 3 L13: -0.7792 L23: 0.3925 REMARK 3 S TENSOR REMARK 3 S11: -0.0385 S12: -0.0528 S13: -0.0946 REMARK 3 S21: 0.1524 S22: 0.0478 S23: -0.1433 REMARK 3 S31: 0.2433 S32: 0.1898 S33: 0.0022 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 203 THROUGH 226 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.2548 -26.7493 -23.2263 REMARK 3 T TENSOR REMARK 3 T11: 0.2122 T22: 0.1606 REMARK 3 T33: 0.1705 T12: -0.0042 REMARK 3 T13: 0.0219 T23: 0.0256 REMARK 3 L TENSOR REMARK 3 L11: 6.8302 L22: 2.7571 REMARK 3 L33: 4.4327 L12: 1.7621 REMARK 3 L13: 3.2596 L23: 1.5793 REMARK 3 S TENSOR REMARK 3 S11: -0.2842 S12: 0.3560 S13: 0.3214 REMARK 3 S21: -0.2959 S22: 0.1284 S23: 0.0827 REMARK 3 S31: -0.3993 S32: 0.1470 S33: 0.1800 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8IAG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 15-FEB-23. REMARK 100 THE DEPOSITION ID IS D_1300035278. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-NOV-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9779 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 81310 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.470 REMARK 200 RESOLUTION RANGE LOW (A) : 61.270 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 11.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.47 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% (W/V) PEG 3350, 100 MM REMARK 280 IMIDAZOLE/HYDROCHLORIC ACID, PH 6.5, 200 MM AMMONIUM SULFATE, 30% REMARK 280 (V/V) 2-METHYL-2,4-PENTANEDIOL, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 279K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.00800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 60.00800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 37.27900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 53.76000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 37.27900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 53.76000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 60.00800 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 37.27900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 53.76000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 60.00800 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 37.27900 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 53.76000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -283.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 74.55800 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -60.00800 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 3 1.000000 0.000000 0.000000 37.27900 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 -53.76000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 37.27900 REMARK 350 BIOMT2 4 0.000000 1.000000 0.000000 -53.76000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -60.00800 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 SER A -8 REMARK 465 SER A -7 REMARK 465 GLY A -6 REMARK 465 LEU A -5 REMARK 465 VAL A -4 REMARK 465 PRO A -3 REMARK 465 ARG A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 HIS A 1 REMARK 465 MET A 2 REMARK 465 LYS A 225 REMARK 465 PRO A 226 REMARK 465 PHE A 227 REMARK 465 ALA A 228 REMARK 465 LYS A 229 REMARK 465 ARG A 230 REMARK 465 SER A 231 REMARK 465 GLU A 232 REMARK 465 ALA A 233 REMARK 465 PRO A 234 REMARK 465 PHE A 235 REMARK 465 GLU A 236 REMARK 465 LYS A 237 REMARK 465 ARG A 238 REMARK 465 ALA A 239 REMARK 465 GLU A 240 REMARK 465 LYS A 241 REMARK 465 ARG A 242 REMARK 465 CYS A 243 REMARK 465 PRO A 244 REMARK 465 PHE A 245 REMARK 465 HIS A 246 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 HIS B -9 REMARK 465 SER B -8 REMARK 465 SER B -7 REMARK 465 GLY B -6 REMARK 465 LEU B -5 REMARK 465 VAL B -4 REMARK 465 PRO B -3 REMARK 465 ARG B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 HIS B 1 REMARK 465 MET B 2 REMARK 465 ALA B 3 REMARK 465 PHE B 227 REMARK 465 ALA B 228 REMARK 465 LYS B 229 REMARK 465 ARG B 230 REMARK 465 SER B 231 REMARK 465 GLU B 232 REMARK 465 ALA B 233 REMARK 465 PRO B 234 REMARK 465 PHE B 235 REMARK 465 GLU B 236 REMARK 465 LYS B 237 REMARK 465 ARG B 238 REMARK 465 ALA B 239 REMARK 465 GLU B 240 REMARK 465 LYS B 241 REMARK 465 ARG B 242 REMARK 465 CYS B 243 REMARK 465 PRO B 244 REMARK 465 PHE B 245 REMARK 465 HIS B 246 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 221 CG CD OE1 OE2 REMARK 470 LYS B 225 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 426 O HOH B 599 1.92 REMARK 500 O HOH A 577 O HOH A 586 2.02 REMARK 500 O HOH A 512 O HOH A 584 2.05 REMARK 500 O HOH A 431 O HOH A 492 2.06 REMARK 500 O HOH A 610 O HOH A 624 2.12 REMARK 500 O HOH A 573 O HOH A 622 2.15 REMARK 500 O HOH B 564 O HOH B 605 2.16 REMARK 500 NH1 ARG A 57 O HOH A 401 2.17 REMARK 500 O HOH A 576 O HOH A 586 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 535 O HOH A 535 4555 1.76 REMARK 500 O HOH A 586 O HOH B 511 5455 1.88 REMARK 500 O HOH A 438 O HOH B 457 4555 2.02 REMARK 500 O HOH A 442 O HOH B 410 4555 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 85 -82.28 -105.97 REMARK 500 THR A 118 59.78 -96.48 REMARK 500 PRO A 189 43.89 -78.50 REMARK 500 VAL B 85 -83.39 -98.00 REMARK 500 PRO B 189 46.07 -77.76 REMARK 500 THR B 224 129.52 -38.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 301 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 17 SG REMARK 620 2 HEM A 301 NA 96.8 REMARK 620 3 HEM A 301 NB 91.7 90.4 REMARK 620 4 HEM A 301 NC 86.4 176.7 89.6 REMARK 620 5 HEM A 301 ND 91.7 89.8 176.5 90.0 REMARK 620 6 IMD A 302 N1 174.1 89.0 87.1 87.8 89.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 305 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 87 OE2 REMARK 620 2 HIS A 88 O 84.0 REMARK 620 3 SER A 91 OG 172.9 92.1 REMARK 620 4 HEM A 301 O2A 102.9 87.5 82.8 REMARK 620 5 HOH A 457 O 92.7 174.1 91.6 88.5 REMARK 620 6 HOH A 503 O 86.5 90.7 87.6 170.2 94.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 301 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 17 SG REMARK 620 2 HEM B 301 NA 96.0 REMARK 620 3 HEM B 301 NB 92.4 88.8 REMARK 620 4 HEM B 301 NC 87.7 176.4 91.1 REMARK 620 5 HEM B 301 ND 92.3 90.3 175.3 89.5 REMARK 620 6 IMD B 302 N3 174.0 89.8 86.0 86.6 89.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 306 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 87 OE2 REMARK 620 2 HIS B 88 O 83.8 REMARK 620 3 SER B 91 OG 174.6 92.2 REMARK 620 4 HEM B 301 O2A 101.4 85.4 81.7 REMARK 620 5 HOH B 450 O 90.4 171.0 94.0 89.1 REMARK 620 6 HOH B 513 O 87.5 92.7 89.1 170.6 93.9 REMARK 620 N 1 2 3 4 5 DBREF 8IAG A -14 246 PDB 8IAG 8IAG -14 246 DBREF 8IAG B -14 246 PDB 8IAG 8IAG -14 246 SEQRES 1 A 261 HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO ARG SEQRES 2 A 261 GLY SER HIS MET ALA PRO TRP LYS ALA PRO GLY PRO ASP SEQRES 3 A 261 ASP VAL ARG GLY PRO CYS PRO MET LEU ASN THR LEU ALA SEQRES 4 A 261 ASN HIS GLY PHE LEU PRO HIS ASP GLY LYS ASN ILE ASP SEQRES 5 A 261 VAL ASN THR THR VAL ASN ALA LEU SER SER ALA LEU ASN SEQRES 6 A 261 LEU ASP ASP GLU LEU SER ARG ASP LEU HIS THR PHE ALA SEQRES 7 A 261 VAL THR THR ASN PRO GLN PRO ASN ALA THR TRP PHE SER SEQRES 8 A 261 LEU ASN HIS LEU SER ARG HIS ASN VAL LEU GLU HIS ASP SEQRES 9 A 261 ALA SER LEU SER ARG GLN ASP ALA TYR PHE GLY PRO PRO SEQRES 10 A 261 ASP VAL PHE ASN ALA ALA VAL PHE ASN GLU THR LYS ALA SEQRES 11 A 261 TYR TRP THR GLY ASP ILE ILE ASN PHE GLN MET ALA ALA SEQRES 12 A 261 ASN ALA LEU THR ALA ARG LEU MET THR SER ASN LEU THR SEQRES 13 A 261 ASN PRO GLU PHE SER MET SER GLN LEU GLY ARG GLY PHE SEQRES 14 A 261 GLY LEU GLY GLU THR VAL CYS TYR VAL THR ILE LEU GLY SEQRES 15 A 261 SER LYS GLU THR ARG THR VAL PRO LYS ALA PHE VAL GLU SEQRES 16 A 261 TYR LEU PHE GLU ASN GLU ARG LEU PRO TYR GLU LEU GLY SEQRES 17 A 261 PHE LYS LYS MET LYS SER ALA LEU THR GLU ASP GLU LEU SEQRES 18 A 261 THR THR MET MET GLY GLU ILE TYR SER LEU GLN HIS LEU SEQRES 19 A 261 PRO GLU SER PHE THR LYS PRO PHE ALA LYS ARG SER GLU SEQRES 20 A 261 ALA PRO PHE GLU LYS ARG ALA GLU LYS ARG CYS PRO PHE SEQRES 21 A 261 HIS SEQRES 1 B 261 HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO ARG SEQRES 2 B 261 GLY SER HIS MET ALA PRO TRP LYS ALA PRO GLY PRO ASP SEQRES 3 B 261 ASP VAL ARG GLY PRO CYS PRO MET LEU ASN THR LEU ALA SEQRES 4 B 261 ASN HIS GLY PHE LEU PRO HIS ASP GLY LYS ASN ILE ASP SEQRES 5 B 261 VAL ASN THR THR VAL ASN ALA LEU SER SER ALA LEU ASN SEQRES 6 B 261 LEU ASP ASP GLU LEU SER ARG ASP LEU HIS THR PHE ALA SEQRES 7 B 261 VAL THR THR ASN PRO GLN PRO ASN ALA THR TRP PHE SER SEQRES 8 B 261 LEU ASN HIS LEU SER ARG HIS ASN VAL LEU GLU HIS ASP SEQRES 9 B 261 ALA SER LEU SER ARG GLN ASP ALA TYR PHE GLY PRO PRO SEQRES 10 B 261 ASP VAL PHE ASN ALA ALA VAL PHE ASN GLU THR LYS ALA SEQRES 11 B 261 TYR TRP THR GLY ASP ILE ILE ASN PHE GLN MET ALA ALA SEQRES 12 B 261 ASN ALA LEU THR ALA ARG LEU MET THR SER ASN LEU THR SEQRES 13 B 261 ASN PRO GLU PHE SER MET SER GLN LEU GLY ARG GLY PHE SEQRES 14 B 261 GLY LEU GLY GLU THR VAL CYS TYR VAL THR ILE LEU GLY SEQRES 15 B 261 SER LYS GLU THR ARG THR VAL PRO LYS ALA PHE VAL GLU SEQRES 16 B 261 TYR LEU PHE GLU ASN GLU ARG LEU PRO TYR GLU LEU GLY SEQRES 17 B 261 PHE LYS LYS MET LYS SER ALA LEU THR GLU ASP GLU LEU SEQRES 18 B 261 THR THR MET MET GLY GLU ILE TYR SER LEU GLN HIS LEU SEQRES 19 B 261 PRO GLU SER PHE THR LYS PRO PHE ALA LYS ARG SER GLU SEQRES 20 B 261 ALA PRO PHE GLU LYS ARG ALA GLU LYS ARG CYS PRO PHE SEQRES 21 B 261 HIS HET HEM A 301 43 HET IMD A 302 5 HET MPD A 303 8 HET MPD A 304 8 HET MG A 305 1 HET HEM B 301 43 HET IMD B 302 5 HET MPD B 303 8 HET MPD B 304 8 HET MPD B 305 8 HET MG B 306 1 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM IMD IMIDAZOLE HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM MG MAGNESIUM ION HETSYN HEM HEME FORMUL 3 HEM 2(C34 H32 FE N4 O4) FORMUL 4 IMD 2(C3 H5 N2 1+) FORMUL 5 MPD 5(C6 H14 O2) FORMUL 7 MG 2(MG 2+) FORMUL 14 HOH *501(H2 O) HELIX 1 AA1 CYS A 17 HIS A 26 1 10 HELIX 2 AA2 VAL A 38 ASN A 50 1 13 HELIX 3 AA3 ASP A 52 THR A 65 1 14 HELIX 4 AA4 SER A 76 ARG A 82 5 7 HELIX 5 AA5 ASN A 106 TYR A 116 1 11 HELIX 6 AA6 ASN A 123 ASN A 142 1 20 HELIX 7 AA7 SER A 148 GLY A 167 1 20 HELIX 8 AA8 LYS A 176 GLU A 186 1 11 HELIX 9 AA9 PRO A 189 GLY A 193 5 5 HELIX 10 AB1 THR A 202 GLN A 217 1 16 HELIX 11 AB2 CYS B 17 HIS B 26 1 10 HELIX 12 AB3 ASP B 37 ASN B 50 1 14 HELIX 13 AB4 ASP B 52 THR B 65 1 14 HELIX 14 AB5 SER B 76 ARG B 82 5 7 HELIX 15 AB6 ASN B 106 ALA B 115 1 10 HELIX 16 AB7 PHE B 124 ASN B 142 1 19 HELIX 17 AB8 SER B 148 GLY B 167 1 20 HELIX 18 AB9 LYS B 176 GLU B 186 1 11 HELIX 19 AC1 PRO B 189 GLY B 193 5 5 HELIX 20 AC2 THR B 202 GLN B 217 1 16 SHEET 1 AA1 2 ILE A 36 ASP A 37 0 SHEET 2 AA1 2 TRP A 74 PHE A 75 -1 O PHE A 75 N ILE A 36 SHEET 1 AA2 2 ILE A 121 ILE A 122 0 SHEET 2 AA2 2 VAL A 174 PRO A 175 -1 O VAL A 174 N ILE A 122 SHEET 1 AA3 2 ILE B 121 ASN B 123 0 SHEET 2 AA3 2 THR B 173 PRO B 175 -1 O VAL B 174 N ILE B 122 LINK SG CYS A 17 FE HEM A 301 1555 1555 2.38 LINK OE2 GLU A 87 MG MG A 305 1555 1555 2.04 LINK O HIS A 88 MG MG A 305 1555 1555 2.11 LINK OG SER A 91 MG MG A 305 1555 1555 2.18 LINK FE HEM A 301 N1 IMD A 302 1555 1555 2.15 LINK O2A HEM A 301 MG MG A 305 1555 1555 2.15 LINK MG MG A 305 O HOH A 457 1555 1555 2.10 LINK MG MG A 305 O HOH A 503 1555 1555 2.12 LINK SG CYS B 17 FE HEM B 301 1555 1555 2.36 LINK OE2 GLU B 87 MG MG B 306 1555 1555 2.07 LINK O HIS B 88 MG MG B 306 1555 1555 2.13 LINK OG SER B 91 MG MG B 306 1555 1555 2.15 LINK FE HEM B 301 N3 IMD B 302 1555 1555 2.12 LINK O2A HEM B 301 MG MG B 306 1555 1555 2.20 LINK MG MG B 306 O HOH B 450 1555 1555 2.11 LINK MG MG B 306 O HOH B 513 1555 1555 2.09 CRYST1 74.558 107.520 120.016 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013412 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009301 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008332 0.00000