data_8IDM # _entry.id 8IDM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8IDM pdb_00008idm 10.2210/pdb8idm/pdb WWPDB D_1300035304 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8IDM _pdbx_database_status.recvd_initial_deposition_date 2023-02-13 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email xinquanwang@mail.tsinghua.edu.cn _pdbx_contact_author.name_first Xinquan _pdbx_contact_author.name_last Wang _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-3136-8070 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Wang, X.' 1 ? 'Tian, L.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;Structural Definition of a Novel Nanobody Binding Site specifically targeting the MERS-CoV RBD Core-Domain with Neutralizing Capacity ; _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Idoudi, F.' 1 ? primary 'Wang, R.' 2 ? primary 'Tian, L.' 3 ? primary 'Zhang, L.' 4 ? primary 'Wang, X.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man VHH-227 14769.238 1 ? ? ? ? 2 polymer man VHH-T71 14863.206 1 ? ? ? ? 3 polymer man 'Spike protein S1' 25258.402 1 ? ? ? ? 4 branched man 'alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose' 367.349 1 ? ? ? ? 5 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 1 ? ? ? ? 6 non-polymer syn 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name 'S glycoprotein,E2,Peplomer protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;QVQLQESGGGSVQAGGSLRLSCSGYTYSSNCVVWFRQTPGKEREVVASIYTGDNSTYYADSVKGRFTISLDNGKKTLYLQ MDSLEAEDTARYYCAAGAATTQTMVACGRTPGPYELKYWGQGTQVTVSSHHHHHH ; ;QVQLQESGGGSVQAGGSLRLSCSGYTYSSNCVVWFRQTPGKEREVVASIYTGDNSTYYADSVKGRFTISLDNGKKTLYLQ MDSLEAEDTARYYCAAGAATTQTMVACGRTPGPYELKYWGQGTQVTVSSHHHHHH ; B ? 2 'polypeptide(L)' no no ;QVQLQESGGGSVQAGGSLTLSCTFSSEYTFTHNAVGWFRQAPGKEREGVAAINGGGGSTYYADSVKDRFTISRDNANTVA SLIMKNLKPEDSGIYYCATDVRLIDWYSGDWSLARLYSTWGQGTQVTVSSHHHHHH ; ;QVQLQESGGGSVQAGGSLTLSCTFSSEYTFTHNAVGWFRQAPGKEREGVAAINGGGGSTYYADSVKDRFTISRDNANTVA SLIMKNLKPEDSGIYYCATDVRLIDWYSGDWSLARLYSTWGQGTQVTVSSHHHHHH ; A ? 3 'polypeptide(L)' no no ;EAKPSGSVVEQAEGVECDFSPLLSGTPPQVYNFKRLVFTNCNYNLTKLLSLFSVNDFTCSQISPAAIASNCYSSLILDYF SYPLSMKSDLSVSSAGPISQFNYKQSFSNPTCLILATVPHNLTTITKPLKYSYINKCSRLLSDDRTEVPQLVNANQYSPC VSIVPSTVWEDGDYYRKQLSPLEGGGWLVASGSTVAMTEQLQMGFGITVQYGTDTNSVCPKLEHHHHHH ; ;EAKPSGSVVEQAEGVECDFSPLLSGTPPQVYNFKRLVFTNCNYNLTKLLSLFSVNDFTCSQISPAAIASNCYSSLILDYF SYPLSMKSDLSVSSAGPISQFNYKQSFSNPTCLILATVPHNLTTITKPLKYSYINKCSRLLSDDRTEVPQLVNANQYSPC VSIVPSTVWEDGDYYRKQLSPLEGGGWLVASGSTVAMTEQLQMGFGITVQYGTDTNSVCPKLEHHHHHH ; D ? # _pdbx_entity_nonpoly.entity_id 6 _pdbx_entity_nonpoly.name 2-acetamido-2-deoxy-beta-D-glucopyranose _pdbx_entity_nonpoly.comp_id NAG # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 VAL n 1 3 GLN n 1 4 LEU n 1 5 GLN n 1 6 GLU n 1 7 SER n 1 8 GLY n 1 9 GLY n 1 10 GLY n 1 11 SER n 1 12 VAL n 1 13 GLN n 1 14 ALA n 1 15 GLY n 1 16 GLY n 1 17 SER n 1 18 LEU n 1 19 ARG n 1 20 LEU n 1 21 SER n 1 22 CYS n 1 23 SER n 1 24 GLY n 1 25 TYR n 1 26 THR n 1 27 TYR n 1 28 SER n 1 29 SER n 1 30 ASN n 1 31 CYS n 1 32 VAL n 1 33 VAL n 1 34 TRP n 1 35 PHE n 1 36 ARG n 1 37 GLN n 1 38 THR n 1 39 PRO n 1 40 GLY n 1 41 LYS n 1 42 GLU n 1 43 ARG n 1 44 GLU n 1 45 VAL n 1 46 VAL n 1 47 ALA n 1 48 SER n 1 49 ILE n 1 50 TYR n 1 51 THR n 1 52 GLY n 1 53 ASP n 1 54 ASN n 1 55 SER n 1 56 THR n 1 57 TYR n 1 58 TYR n 1 59 ALA n 1 60 ASP n 1 61 SER n 1 62 VAL n 1 63 LYS n 1 64 GLY n 1 65 ARG n 1 66 PHE n 1 67 THR n 1 68 ILE n 1 69 SER n 1 70 LEU n 1 71 ASP n 1 72 ASN n 1 73 GLY n 1 74 LYS n 1 75 LYS n 1 76 THR n 1 77 LEU n 1 78 TYR n 1 79 LEU n 1 80 GLN n 1 81 MET n 1 82 ASP n 1 83 SER n 1 84 LEU n 1 85 GLU n 1 86 ALA n 1 87 GLU n 1 88 ASP n 1 89 THR n 1 90 ALA n 1 91 ARG n 1 92 TYR n 1 93 TYR n 1 94 CYS n 1 95 ALA n 1 96 ALA n 1 97 GLY n 1 98 ALA n 1 99 ALA n 1 100 THR n 1 101 THR n 1 102 GLN n 1 103 THR n 1 104 MET n 1 105 VAL n 1 106 ALA n 1 107 CYS n 1 108 GLY n 1 109 ARG n 1 110 THR n 1 111 PRO n 1 112 GLY n 1 113 PRO n 1 114 TYR n 1 115 GLU n 1 116 LEU n 1 117 LYS n 1 118 TYR n 1 119 TRP n 1 120 GLY n 1 121 GLN n 1 122 GLY n 1 123 THR n 1 124 GLN n 1 125 VAL n 1 126 THR n 1 127 VAL n 1 128 SER n 1 129 SER n 1 130 HIS n 1 131 HIS n 1 132 HIS n 1 133 HIS n 1 134 HIS n 1 135 HIS n 2 1 GLN n 2 2 VAL n 2 3 GLN n 2 4 LEU n 2 5 GLN n 2 6 GLU n 2 7 SER n 2 8 GLY n 2 9 GLY n 2 10 GLY n 2 11 SER n 2 12 VAL n 2 13 GLN n 2 14 ALA n 2 15 GLY n 2 16 GLY n 2 17 SER n 2 18 LEU n 2 19 THR n 2 20 LEU n 2 21 SER n 2 22 CYS n 2 23 THR n 2 24 PHE n 2 25 SER n 2 26 SER n 2 27 GLU n 2 28 TYR n 2 29 THR n 2 30 PHE n 2 31 THR n 2 32 HIS n 2 33 ASN n 2 34 ALA n 2 35 VAL n 2 36 GLY n 2 37 TRP n 2 38 PHE n 2 39 ARG n 2 40 GLN n 2 41 ALA n 2 42 PRO n 2 43 GLY n 2 44 LYS n 2 45 GLU n 2 46 ARG n 2 47 GLU n 2 48 GLY n 2 49 VAL n 2 50 ALA n 2 51 ALA n 2 52 ILE n 2 53 ASN n 2 54 GLY n 2 55 GLY n 2 56 GLY n 2 57 GLY n 2 58 SER n 2 59 THR n 2 60 TYR n 2 61 TYR n 2 62 ALA n 2 63 ASP n 2 64 SER n 2 65 VAL n 2 66 LYS n 2 67 ASP n 2 68 ARG n 2 69 PHE n 2 70 THR n 2 71 ILE n 2 72 SER n 2 73 ARG n 2 74 ASP n 2 75 ASN n 2 76 ALA n 2 77 ASN n 2 78 THR n 2 79 VAL n 2 80 ALA n 2 81 SER n 2 82 LEU n 2 83 ILE n 2 84 MET n 2 85 LYS n 2 86 ASN n 2 87 LEU n 2 88 LYS n 2 89 PRO n 2 90 GLU n 2 91 ASP n 2 92 SER n 2 93 GLY n 2 94 ILE n 2 95 TYR n 2 96 TYR n 2 97 CYS n 2 98 ALA n 2 99 THR n 2 100 ASP n 2 101 VAL n 2 102 ARG n 2 103 LEU n 2 104 ILE n 2 105 ASP n 2 106 TRP n 2 107 TYR n 2 108 SER n 2 109 GLY n 2 110 ASP n 2 111 TRP n 2 112 SER n 2 113 LEU n 2 114 ALA n 2 115 ARG n 2 116 LEU n 2 117 TYR n 2 118 SER n 2 119 THR n 2 120 TRP n 2 121 GLY n 2 122 GLN n 2 123 GLY n 2 124 THR n 2 125 GLN n 2 126 VAL n 2 127 THR n 2 128 VAL n 2 129 SER n 2 130 SER n 2 131 HIS n 2 132 HIS n 2 133 HIS n 2 134 HIS n 2 135 HIS n 2 136 HIS n 3 1 GLU n 3 2 ALA n 3 3 LYS n 3 4 PRO n 3 5 SER n 3 6 GLY n 3 7 SER n 3 8 VAL n 3 9 VAL n 3 10 GLU n 3 11 GLN n 3 12 ALA n 3 13 GLU n 3 14 GLY n 3 15 VAL n 3 16 GLU n 3 17 CYS n 3 18 ASP n 3 19 PHE n 3 20 SER n 3 21 PRO n 3 22 LEU n 3 23 LEU n 3 24 SER n 3 25 GLY n 3 26 THR n 3 27 PRO n 3 28 PRO n 3 29 GLN n 3 30 VAL n 3 31 TYR n 3 32 ASN n 3 33 PHE n 3 34 LYS n 3 35 ARG n 3 36 LEU n 3 37 VAL n 3 38 PHE n 3 39 THR n 3 40 ASN n 3 41 CYS n 3 42 ASN n 3 43 TYR n 3 44 ASN n 3 45 LEU n 3 46 THR n 3 47 LYS n 3 48 LEU n 3 49 LEU n 3 50 SER n 3 51 LEU n 3 52 PHE n 3 53 SER n 3 54 VAL n 3 55 ASN n 3 56 ASP n 3 57 PHE n 3 58 THR n 3 59 CYS n 3 60 SER n 3 61 GLN n 3 62 ILE n 3 63 SER n 3 64 PRO n 3 65 ALA n 3 66 ALA n 3 67 ILE n 3 68 ALA n 3 69 SER n 3 70 ASN n 3 71 CYS n 3 72 TYR n 3 73 SER n 3 74 SER n 3 75 LEU n 3 76 ILE n 3 77 LEU n 3 78 ASP n 3 79 TYR n 3 80 PHE n 3 81 SER n 3 82 TYR n 3 83 PRO n 3 84 LEU n 3 85 SER n 3 86 MET n 3 87 LYS n 3 88 SER n 3 89 ASP n 3 90 LEU n 3 91 SER n 3 92 VAL n 3 93 SER n 3 94 SER n 3 95 ALA n 3 96 GLY n 3 97 PRO n 3 98 ILE n 3 99 SER n 3 100 GLN n 3 101 PHE n 3 102 ASN n 3 103 TYR n 3 104 LYS n 3 105 GLN n 3 106 SER n 3 107 PHE n 3 108 SER n 3 109 ASN n 3 110 PRO n 3 111 THR n 3 112 CYS n 3 113 LEU n 3 114 ILE n 3 115 LEU n 3 116 ALA n 3 117 THR n 3 118 VAL n 3 119 PRO n 3 120 HIS n 3 121 ASN n 3 122 LEU n 3 123 THR n 3 124 THR n 3 125 ILE n 3 126 THR n 3 127 LYS n 3 128 PRO n 3 129 LEU n 3 130 LYS n 3 131 TYR n 3 132 SER n 3 133 TYR n 3 134 ILE n 3 135 ASN n 3 136 LYS n 3 137 CYS n 3 138 SER n 3 139 ARG n 3 140 LEU n 3 141 LEU n 3 142 SER n 3 143 ASP n 3 144 ASP n 3 145 ARG n 3 146 THR n 3 147 GLU n 3 148 VAL n 3 149 PRO n 3 150 GLN n 3 151 LEU n 3 152 VAL n 3 153 ASN n 3 154 ALA n 3 155 ASN n 3 156 GLN n 3 157 TYR n 3 158 SER n 3 159 PRO n 3 160 CYS n 3 161 VAL n 3 162 SER n 3 163 ILE n 3 164 VAL n 3 165 PRO n 3 166 SER n 3 167 THR n 3 168 VAL n 3 169 TRP n 3 170 GLU n 3 171 ASP n 3 172 GLY n 3 173 ASP n 3 174 TYR n 3 175 TYR n 3 176 ARG n 3 177 LYS n 3 178 GLN n 3 179 LEU n 3 180 SER n 3 181 PRO n 3 182 LEU n 3 183 GLU n 3 184 GLY n 3 185 GLY n 3 186 GLY n 3 187 TRP n 3 188 LEU n 3 189 VAL n 3 190 ALA n 3 191 SER n 3 192 GLY n 3 193 SER n 3 194 THR n 3 195 VAL n 3 196 ALA n 3 197 MET n 3 198 THR n 3 199 GLU n 3 200 GLN n 3 201 LEU n 3 202 GLN n 3 203 MET n 3 204 GLY n 3 205 PHE n 3 206 GLY n 3 207 ILE n 3 208 THR n 3 209 VAL n 3 210 GLN n 3 211 TYR n 3 212 GLY n 3 213 THR n 3 214 ASP n 3 215 THR n 3 216 ASN n 3 217 SER n 3 218 VAL n 3 219 CYS n 3 220 PRO n 3 221 LYS n 3 222 LEU n 3 223 GLU n 3 224 HIS n 3 225 HIS n 3 226 HIS n 3 227 HIS n 3 228 HIS n 3 229 HIS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 135 ? ? ? ? ? ? ? ? ? 'Camelus dromedarius' 9838 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 136 ? ? ? ? ? ? ? ? ? 'Camelus dromedarius' 9838 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 229 ? ? ? ? ? ? ? ? ? 'Middle East respiratory syndrome-related coronavirus' 1335626 ? ? ? ? ? ? ? ? 'Trichoplusia ni' 7111 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 4 oligosaccharide 5 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 4 LFucpa1-6DGlcpNAcb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 4 'WURCS=2.0/2,2,1/[a2122h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5]/1-2/a6-b1' WURCS PDB2Glycan 1.1.0 3 4 '[][D-1-deoxy-GlcpNAc]{[(6+1)][a-L-Fucp]{}}' LINUCS PDB-CARE ? 4 5 DGlcpNAcb1-4DGlcpNAcb1-ROH 'Glycam Condensed Sequence' GMML 1.0 5 5 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 6 5 '[][D-1-deoxy-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 4 2 FUC C1 O1 1 NAG O6 HO6 sing ? 2 5 2 NAG C1 O1 1 NAG O4 HO4 sing ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 1 1 GLN GLN B . n A 1 2 VAL 2 2 2 VAL VAL B . n A 1 3 GLN 3 3 3 GLN GLN B . n A 1 4 LEU 4 4 4 LEU LEU B . n A 1 5 GLN 5 5 5 GLN GLN B . n A 1 6 GLU 6 6 6 GLU GLU B . n A 1 7 SER 7 7 7 SER SER B . n A 1 8 GLY 8 8 8 GLY GLY B . n A 1 9 GLY 9 9 9 GLY GLY B . n A 1 10 GLY 10 10 10 GLY GLY B . n A 1 11 SER 11 11 11 SER SER B . n A 1 12 VAL 12 12 12 VAL VAL B . n A 1 13 GLN 13 13 13 GLN GLN B . n A 1 14 ALA 14 14 14 ALA ALA B . n A 1 15 GLY 15 15 15 GLY GLY B . n A 1 16 GLY 16 16 16 GLY GLY B . n A 1 17 SER 17 17 17 SER SER B . n A 1 18 LEU 18 18 18 LEU LEU B . n A 1 19 ARG 19 19 19 ARG ARG B . n A 1 20 LEU 20 20 20 LEU LEU B . n A 1 21 SER 21 21 21 SER SER B . n A 1 22 CYS 22 22 22 CYS CYS B . n A 1 23 SER 23 23 23 SER SER B . n A 1 24 GLY 24 24 24 GLY GLY B . n A 1 25 TYR 25 25 25 TYR TYR B . n A 1 26 THR 26 26 26 THR THR B . n A 1 27 TYR 27 27 27 TYR TYR B . n A 1 28 SER 28 28 28 SER SER B . n A 1 29 SER 29 29 29 SER SER B . n A 1 30 ASN 30 30 30 ASN ASN B . n A 1 31 CYS 31 31 31 CYS CYS B . n A 1 32 VAL 32 32 32 VAL VAL B . n A 1 33 VAL 33 33 33 VAL VAL B . n A 1 34 TRP 34 34 34 TRP TRP B . n A 1 35 PHE 35 35 35 PHE PHE B . n A 1 36 ARG 36 36 36 ARG ARG B . n A 1 37 GLN 37 37 37 GLN GLN B . n A 1 38 THR 38 38 38 THR THR B . n A 1 39 PRO 39 39 39 PRO PRO B . n A 1 40 GLY 40 40 40 GLY GLY B . n A 1 41 LYS 41 41 41 LYS LYS B . n A 1 42 GLU 42 42 42 GLU GLU B . n A 1 43 ARG 43 43 43 ARG ARG B . n A 1 44 GLU 44 44 44 GLU GLU B . n A 1 45 VAL 45 45 45 VAL VAL B . n A 1 46 VAL 46 46 46 VAL VAL B . n A 1 47 ALA 47 47 47 ALA ALA B . n A 1 48 SER 48 48 48 SER SER B . n A 1 49 ILE 49 49 49 ILE ILE B . n A 1 50 TYR 50 50 50 TYR TYR B . n A 1 51 THR 51 51 51 THR THR B . n A 1 52 GLY 52 52 52 GLY GLY B . n A 1 53 ASP 53 53 53 ASP ASP B . n A 1 54 ASN 54 54 54 ASN ASN B . n A 1 55 SER 55 55 55 SER SER B . n A 1 56 THR 56 56 56 THR THR B . n A 1 57 TYR 57 57 57 TYR TYR B . n A 1 58 TYR 58 58 58 TYR TYR B . n A 1 59 ALA 59 59 59 ALA ALA B . n A 1 60 ASP 60 60 60 ASP ASP B . n A 1 61 SER 61 61 61 SER SER B . n A 1 62 VAL 62 62 62 VAL VAL B . n A 1 63 LYS 63 63 63 LYS LYS B . n A 1 64 GLY 64 64 64 GLY GLY B . n A 1 65 ARG 65 65 65 ARG ARG B . n A 1 66 PHE 66 66 66 PHE PHE B . n A 1 67 THR 67 67 67 THR THR B . n A 1 68 ILE 68 68 68 ILE ILE B . n A 1 69 SER 69 69 69 SER SER B . n A 1 70 LEU 70 70 70 LEU LEU B . n A 1 71 ASP 71 71 71 ASP ASP B . n A 1 72 ASN 72 72 72 ASN ASN B . n A 1 73 GLY 73 73 73 GLY GLY B . n A 1 74 LYS 74 74 74 LYS LYS B . n A 1 75 LYS 75 75 75 LYS LYS B . n A 1 76 THR 76 76 76 THR THR B . n A 1 77 LEU 77 77 77 LEU LEU B . n A 1 78 TYR 78 78 78 TYR TYR B . n A 1 79 LEU 79 79 79 LEU LEU B . n A 1 80 GLN 80 80 80 GLN GLN B . n A 1 81 MET 81 81 81 MET MET B . n A 1 82 ASP 82 82 82 ASP ASP B . n A 1 83 SER 83 83 83 SER SER B . n A 1 84 LEU 84 84 84 LEU LEU B . n A 1 85 GLU 85 85 85 GLU GLU B . n A 1 86 ALA 86 86 86 ALA ALA B . n A 1 87 GLU 87 87 87 GLU GLU B . n A 1 88 ASP 88 88 88 ASP ASP B . n A 1 89 THR 89 89 89 THR THR B . n A 1 90 ALA 90 90 90 ALA ALA B . n A 1 91 ARG 91 91 91 ARG ARG B . n A 1 92 TYR 92 92 92 TYR TYR B . n A 1 93 TYR 93 93 93 TYR TYR B . n A 1 94 CYS 94 94 94 CYS CYS B . n A 1 95 ALA 95 95 95 ALA ALA B . n A 1 96 ALA 96 96 96 ALA ALA B . n A 1 97 GLY 97 97 97 GLY GLY B . n A 1 98 ALA 98 98 98 ALA ALA B . n A 1 99 ALA 99 99 99 ALA ALA B . n A 1 100 THR 100 100 100 THR THR B . n A 1 101 THR 101 101 101 THR THR B . n A 1 102 GLN 102 102 102 GLN GLN B . n A 1 103 THR 103 103 103 THR THR B . n A 1 104 MET 104 104 104 MET MET B . n A 1 105 VAL 105 105 105 VAL VAL B . n A 1 106 ALA 106 106 106 ALA ALA B . n A 1 107 CYS 107 107 107 CYS CYS B . n A 1 108 GLY 108 108 108 GLY GLY B . n A 1 109 ARG 109 109 109 ARG ARG B . n A 1 110 THR 110 110 110 THR THR B . n A 1 111 PRO 111 111 111 PRO PRO B . n A 1 112 GLY 112 112 112 GLY GLY B . n A 1 113 PRO 113 113 113 PRO PRO B . n A 1 114 TYR 114 114 114 TYR TYR B . n A 1 115 GLU 115 115 115 GLU GLU B . n A 1 116 LEU 116 116 116 LEU LEU B . n A 1 117 LYS 117 117 117 LYS LYS B . n A 1 118 TYR 118 118 118 TYR TYR B . n A 1 119 TRP 119 119 119 TRP TRP B . n A 1 120 GLY 120 120 120 GLY GLY B . n A 1 121 GLN 121 121 121 GLN GLN B . n A 1 122 GLY 122 122 122 GLY GLY B . n A 1 123 THR 123 123 123 THR THR B . n A 1 124 GLN 124 124 124 GLN GLN B . n A 1 125 VAL 125 125 125 VAL VAL B . n A 1 126 THR 126 126 126 THR THR B . n A 1 127 VAL 127 127 127 VAL VAL B . n A 1 128 SER 128 128 128 SER SER B . n A 1 129 SER 129 129 129 SER SER B . n A 1 130 HIS 130 130 ? ? ? B . n A 1 131 HIS 131 131 ? ? ? B . n A 1 132 HIS 132 132 ? ? ? B . n A 1 133 HIS 133 133 ? ? ? B . n A 1 134 HIS 134 134 ? ? ? B . n A 1 135 HIS 135 135 ? ? ? B . n B 2 1 GLN 1 0 ? ? ? A . n B 2 2 VAL 2 1 1 VAL VAL A . n B 2 3 GLN 3 2 2 GLN GLN A . n B 2 4 LEU 4 3 3 LEU LEU A . n B 2 5 GLN 5 4 4 GLN GLN A . n B 2 6 GLU 6 5 5 GLU GLU A . n B 2 7 SER 7 6 6 SER SER A . n B 2 8 GLY 8 7 7 GLY GLY A . n B 2 9 GLY 9 8 8 GLY GLY A . n B 2 10 GLY 10 9 9 GLY GLY A . n B 2 11 SER 11 10 10 SER SER A . n B 2 12 VAL 12 11 11 VAL VAL A . n B 2 13 GLN 13 12 12 GLN GLN A . n B 2 14 ALA 14 13 13 ALA ALA A . n B 2 15 GLY 15 14 14 GLY GLY A . n B 2 16 GLY 16 15 15 GLY GLY A . n B 2 17 SER 17 16 16 SER SER A . n B 2 18 LEU 18 17 17 LEU LEU A . n B 2 19 THR 19 18 18 THR THR A . n B 2 20 LEU 20 19 19 LEU LEU A . n B 2 21 SER 21 20 20 SER SER A . n B 2 22 CYS 22 21 21 CYS CYS A . n B 2 23 THR 23 22 22 THR THR A . n B 2 24 PHE 24 23 23 PHE PHE A . n B 2 25 SER 25 24 24 SER SER A . n B 2 26 SER 26 25 25 SER SER A . n B 2 27 GLU 27 26 26 GLU GLU A . n B 2 28 TYR 28 27 27 TYR TYR A . n B 2 29 THR 29 28 28 THR THR A . n B 2 30 PHE 30 29 29 PHE PHE A . n B 2 31 THR 31 30 30 THR THR A . n B 2 32 HIS 32 31 31 HIS HIS A . n B 2 33 ASN 33 32 32 ASN ASN A . n B 2 34 ALA 34 33 33 ALA ALA A . n B 2 35 VAL 35 34 34 VAL VAL A . n B 2 36 GLY 36 35 35 GLY GLY A . n B 2 37 TRP 37 36 36 TRP TRP A . n B 2 38 PHE 38 37 37 PHE PHE A . n B 2 39 ARG 39 38 38 ARG ARG A . n B 2 40 GLN 40 39 39 GLN GLN A . n B 2 41 ALA 41 40 40 ALA ALA A . n B 2 42 PRO 42 41 41 PRO PRO A . n B 2 43 GLY 43 42 42 GLY GLY A . n B 2 44 LYS 44 43 43 LYS LYS A . n B 2 45 GLU 45 44 44 GLU GLU A . n B 2 46 ARG 46 45 45 ARG ARG A . n B 2 47 GLU 47 46 46 GLU GLU A . n B 2 48 GLY 48 47 47 GLY GLY A . n B 2 49 VAL 49 48 48 VAL VAL A . n B 2 50 ALA 50 49 49 ALA ALA A . n B 2 51 ALA 51 50 50 ALA ALA A . n B 2 52 ILE 52 51 51 ILE ILE A . n B 2 53 ASN 53 52 52 ASN ASN A . n B 2 54 GLY 54 53 53 GLY GLY A . n B 2 55 GLY 55 54 54 GLY GLY A . n B 2 56 GLY 56 55 55 GLY GLY A . n B 2 57 GLY 57 56 56 GLY GLY A . n B 2 58 SER 58 57 57 SER SER A . n B 2 59 THR 59 58 58 THR THR A . n B 2 60 TYR 60 59 59 TYR TYR A . n B 2 61 TYR 61 60 60 TYR TYR A . n B 2 62 ALA 62 61 61 ALA ALA A . n B 2 63 ASP 63 62 62 ASP ASP A . n B 2 64 SER 64 63 63 SER SER A . n B 2 65 VAL 65 64 64 VAL VAL A . n B 2 66 LYS 66 65 65 LYS LYS A . n B 2 67 ASP 67 66 66 ASP ASP A . n B 2 68 ARG 68 67 67 ARG ARG A . n B 2 69 PHE 69 68 68 PHE PHE A . n B 2 70 THR 70 69 69 THR THR A . n B 2 71 ILE 71 70 70 ILE ILE A . n B 2 72 SER 72 71 71 SER SER A . n B 2 73 ARG 73 72 72 ARG ARG A . n B 2 74 ASP 74 73 73 ASP ASP A . n B 2 75 ASN 75 74 74 ASN ASN A . n B 2 76 ALA 76 75 75 ALA ALA A . n B 2 77 ASN 77 76 76 ASN ASN A . n B 2 78 THR 78 77 77 THR THR A . n B 2 79 VAL 79 78 78 VAL VAL A . n B 2 80 ALA 80 79 79 ALA ALA A . n B 2 81 SER 81 80 80 SER SER A . n B 2 82 LEU 82 81 81 LEU LEU A . n B 2 83 ILE 83 82 82 ILE ILE A . n B 2 84 MET 84 83 83 MET MET A . n B 2 85 LYS 85 84 84 LYS LYS A . n B 2 86 ASN 86 85 85 ASN ASN A . n B 2 87 LEU 87 86 86 LEU LEU A . n B 2 88 LYS 88 87 87 LYS LYS A . n B 2 89 PRO 89 88 88 PRO PRO A . n B 2 90 GLU 90 89 89 GLU GLU A . n B 2 91 ASP 91 90 90 ASP ASP A . n B 2 92 SER 92 91 91 SER SER A . n B 2 93 GLY 93 92 92 GLY GLY A . n B 2 94 ILE 94 93 93 ILE ILE A . n B 2 95 TYR 95 94 94 TYR TYR A . n B 2 96 TYR 96 95 95 TYR TYR A . n B 2 97 CYS 97 96 96 CYS CYS A . n B 2 98 ALA 98 97 97 ALA ALA A . n B 2 99 THR 99 98 98 THR THR A . n B 2 100 ASP 100 99 99 ASP ASP A . n B 2 101 VAL 101 100 100 VAL VAL A . n B 2 102 ARG 102 101 101 ARG ARG A . n B 2 103 LEU 103 102 102 LEU LEU A . n B 2 104 ILE 104 103 103 ILE ILE A . n B 2 105 ASP 105 104 104 ASP ASP A . n B 2 106 TRP 106 105 105 TRP TRP A . n B 2 107 TYR 107 106 106 TYR TYR A . n B 2 108 SER 108 107 107 SER SER A . n B 2 109 GLY 109 108 108 GLY GLY A . n B 2 110 ASP 110 109 109 ASP ASP A . n B 2 111 TRP 111 110 110 TRP TRP A . n B 2 112 SER 112 111 111 SER SER A . n B 2 113 LEU 113 112 112 LEU LEU A . n B 2 114 ALA 114 113 113 ALA ALA A . n B 2 115 ARG 115 114 114 ARG ARG A . n B 2 116 LEU 116 115 115 LEU LEU A . n B 2 117 TYR 117 116 116 TYR TYR A . n B 2 118 SER 118 117 117 SER SER A . n B 2 119 THR 119 118 118 THR THR A . n B 2 120 TRP 120 119 119 TRP TRP A . n B 2 121 GLY 121 120 120 GLY GLY A . n B 2 122 GLN 122 121 121 GLN GLN A . n B 2 123 GLY 123 122 122 GLY GLY A . n B 2 124 THR 124 123 123 THR THR A . n B 2 125 GLN 125 124 124 GLN GLN A . n B 2 126 VAL 126 125 125 VAL VAL A . n B 2 127 THR 127 126 126 THR THR A . n B 2 128 VAL 128 127 127 VAL VAL A . n B 2 129 SER 129 128 128 SER SER A . n B 2 130 SER 130 129 129 SER SER A . n B 2 131 HIS 131 130 ? ? ? A . n B 2 132 HIS 132 131 ? ? ? A . n B 2 133 HIS 133 132 ? ? ? A . n B 2 134 HIS 134 133 ? ? ? A . n B 2 135 HIS 135 134 ? ? ? A . n B 2 136 HIS 136 135 ? ? ? A . n C 3 1 GLU 1 367 ? ? ? D . n C 3 2 ALA 2 368 ? ? ? D . n C 3 3 LYS 3 369 ? ? ? D . n C 3 4 PRO 4 370 ? ? ? D . n C 3 5 SER 5 371 ? ? ? D . n C 3 6 GLY 6 372 ? ? ? D . n C 3 7 SER 7 373 ? ? ? D . n C 3 8 VAL 8 374 ? ? ? D . n C 3 9 VAL 9 375 ? ? ? D . n C 3 10 GLU 10 376 ? ? ? D . n C 3 11 GLN 11 377 ? ? ? D . n C 3 12 ALA 12 378 ? ? ? D . n C 3 13 GLU 13 379 ? ? ? D . n C 3 14 GLY 14 380 ? ? ? D . n C 3 15 VAL 15 381 381 VAL VAL D . n C 3 16 GLU 16 382 382 GLU GLU D . n C 3 17 CYS 17 383 383 CYS CYS D . n C 3 18 ASP 18 384 384 ASP ASP D . n C 3 19 PHE 19 385 385 PHE PHE D . n C 3 20 SER 20 386 386 SER SER D . n C 3 21 PRO 21 387 387 PRO PRO D . n C 3 22 LEU 22 388 388 LEU LEU D . n C 3 23 LEU 23 389 389 LEU LEU D . n C 3 24 SER 24 390 390 SER SER D . n C 3 25 GLY 25 391 391 GLY GLY D . n C 3 26 THR 26 392 392 THR THR D . n C 3 27 PRO 27 393 393 PRO PRO D . n C 3 28 PRO 28 394 394 PRO PRO D . n C 3 29 GLN 29 395 395 GLN GLN D . n C 3 30 VAL 30 396 396 VAL VAL D . n C 3 31 TYR 31 397 397 TYR TYR D . n C 3 32 ASN 32 398 398 ASN ASN D . n C 3 33 PHE 33 399 399 PHE PHE D . n C 3 34 LYS 34 400 400 LYS LYS D . n C 3 35 ARG 35 401 401 ARG ARG D . n C 3 36 LEU 36 402 402 LEU LEU D . n C 3 37 VAL 37 403 403 VAL VAL D . n C 3 38 PHE 38 404 404 PHE PHE D . n C 3 39 THR 39 405 405 THR THR D . n C 3 40 ASN 40 406 406 ASN ASN D . n C 3 41 CYS 41 407 407 CYS CYS D . n C 3 42 ASN 42 408 408 ASN ASN D . n C 3 43 TYR 43 409 409 TYR TYR D . n C 3 44 ASN 44 410 410 ASN ASN D . n C 3 45 LEU 45 411 411 LEU LEU D . n C 3 46 THR 46 412 412 THR THR D . n C 3 47 LYS 47 413 413 LYS LYS D . n C 3 48 LEU 48 414 414 LEU LEU D . n C 3 49 LEU 49 415 415 LEU LEU D . n C 3 50 SER 50 416 416 SER SER D . n C 3 51 LEU 51 417 417 LEU LEU D . n C 3 52 PHE 52 418 418 PHE PHE D . n C 3 53 SER 53 419 419 SER SER D . n C 3 54 VAL 54 420 420 VAL VAL D . n C 3 55 ASN 55 421 421 ASN ASN D . n C 3 56 ASP 56 422 422 ASP ASP D . n C 3 57 PHE 57 423 423 PHE PHE D . n C 3 58 THR 58 424 424 THR THR D . n C 3 59 CYS 59 425 425 CYS CYS D . n C 3 60 SER 60 426 426 SER SER D . n C 3 61 GLN 61 427 427 GLN GLN D . n C 3 62 ILE 62 428 428 ILE ILE D . n C 3 63 SER 63 429 429 SER SER D . n C 3 64 PRO 64 430 430 PRO PRO D . n C 3 65 ALA 65 431 431 ALA ALA D . n C 3 66 ALA 66 432 432 ALA ALA D . n C 3 67 ILE 67 433 433 ILE ILE D . n C 3 68 ALA 68 434 434 ALA ALA D . n C 3 69 SER 69 435 435 SER SER D . n C 3 70 ASN 70 436 436 ASN ASN D . n C 3 71 CYS 71 437 437 CYS CYS D . n C 3 72 TYR 72 438 438 TYR TYR D . n C 3 73 SER 73 439 439 SER SER D . n C 3 74 SER 74 440 440 SER SER D . n C 3 75 LEU 75 441 441 LEU LEU D . n C 3 76 ILE 76 442 442 ILE ILE D . n C 3 77 LEU 77 443 443 LEU LEU D . n C 3 78 ASP 78 444 444 ASP ASP D . n C 3 79 TYR 79 445 445 TYR TYR D . n C 3 80 PHE 80 446 446 PHE PHE D . n C 3 81 SER 81 447 447 SER SER D . n C 3 82 TYR 82 448 448 TYR TYR D . n C 3 83 PRO 83 449 449 PRO PRO D . n C 3 84 LEU 84 450 450 LEU LEU D . n C 3 85 SER 85 451 451 SER SER D . n C 3 86 MET 86 452 452 MET MET D . n C 3 87 LYS 87 453 453 LYS LYS D . n C 3 88 SER 88 454 454 SER SER D . n C 3 89 ASP 89 455 455 ASP ASP D . n C 3 90 LEU 90 456 456 LEU LEU D . n C 3 91 SER 91 457 457 SER SER D . n C 3 92 VAL 92 458 458 VAL VAL D . n C 3 93 SER 93 459 459 SER SER D . n C 3 94 SER 94 460 460 SER SER D . n C 3 95 ALA 95 461 461 ALA ALA D . n C 3 96 GLY 96 462 462 GLY GLY D . n C 3 97 PRO 97 463 463 PRO PRO D . n C 3 98 ILE 98 464 464 ILE ILE D . n C 3 99 SER 99 465 465 SER SER D . n C 3 100 GLN 100 466 466 GLN GLN D . n C 3 101 PHE 101 467 467 PHE PHE D . n C 3 102 ASN 102 468 468 ASN ASN D . n C 3 103 TYR 103 469 469 TYR TYR D . n C 3 104 LYS 104 470 470 LYS LYS D . n C 3 105 GLN 105 471 471 GLN GLN D . n C 3 106 SER 106 472 472 SER SER D . n C 3 107 PHE 107 473 473 PHE PHE D . n C 3 108 SER 108 474 474 SER SER D . n C 3 109 ASN 109 475 475 ASN ASN D . n C 3 110 PRO 110 476 476 PRO PRO D . n C 3 111 THR 111 477 477 THR THR D . n C 3 112 CYS 112 478 478 CYS CYS D . n C 3 113 LEU 113 479 479 LEU LEU D . n C 3 114 ILE 114 480 480 ILE ILE D . n C 3 115 LEU 115 481 481 LEU LEU D . n C 3 116 ALA 116 482 482 ALA ALA D . n C 3 117 THR 117 483 483 THR THR D . n C 3 118 VAL 118 484 484 VAL VAL D . n C 3 119 PRO 119 485 485 PRO PRO D . n C 3 120 HIS 120 486 486 HIS HIS D . n C 3 121 ASN 121 487 487 ASN ASN D . n C 3 122 LEU 122 488 488 LEU LEU D . n C 3 123 THR 123 489 489 THR THR D . n C 3 124 THR 124 490 490 THR THR D . n C 3 125 ILE 125 491 491 ILE ILE D . n C 3 126 THR 126 492 492 THR THR D . n C 3 127 LYS 127 493 493 LYS LYS D . n C 3 128 PRO 128 494 494 PRO PRO D . n C 3 129 LEU 129 495 495 LEU LEU D . n C 3 130 LYS 130 496 496 LYS LYS D . n C 3 131 TYR 131 497 497 TYR TYR D . n C 3 132 SER 132 498 498 SER SER D . n C 3 133 TYR 133 499 499 TYR TYR D . n C 3 134 ILE 134 500 500 ILE ILE D . n C 3 135 ASN 135 501 501 ASN ASN D . n C 3 136 LYS 136 502 502 LYS LYS D . n C 3 137 CYS 137 503 503 CYS CYS D . n C 3 138 SER 138 504 504 SER SER D . n C 3 139 ARG 139 505 505 ARG ARG D . n C 3 140 LEU 140 506 506 LEU LEU D . n C 3 141 LEU 141 507 507 LEU LEU D . n C 3 142 SER 142 508 508 SER SER D . n C 3 143 ASP 143 509 509 ASP ASP D . n C 3 144 ASP 144 510 510 ASP ASP D . n C 3 145 ARG 145 511 511 ARG ARG D . n C 3 146 THR 146 512 512 THR THR D . n C 3 147 GLU 147 513 513 GLU GLU D . n C 3 148 VAL 148 514 514 VAL VAL D . n C 3 149 PRO 149 515 515 PRO PRO D . n C 3 150 GLN 150 516 516 GLN GLN D . n C 3 151 LEU 151 517 517 LEU LEU D . n C 3 152 VAL 152 518 518 VAL VAL D . n C 3 153 ASN 153 519 519 ASN ASN D . n C 3 154 ALA 154 520 520 ALA ALA D . n C 3 155 ASN 155 521 521 ASN ASN D . n C 3 156 GLN 156 522 522 GLN GLN D . n C 3 157 TYR 157 523 523 TYR TYR D . n C 3 158 SER 158 524 524 SER SER D . n C 3 159 PRO 159 525 525 PRO PRO D . n C 3 160 CYS 160 526 526 CYS CYS D . n C 3 161 VAL 161 527 527 VAL VAL D . n C 3 162 SER 162 528 528 SER SER D . n C 3 163 ILE 163 529 529 ILE ILE D . n C 3 164 VAL 164 530 530 VAL VAL D . n C 3 165 PRO 165 531 531 PRO PRO D . n C 3 166 SER 166 532 532 SER SER D . n C 3 167 THR 167 533 533 THR THR D . n C 3 168 VAL 168 534 534 VAL VAL D . n C 3 169 TRP 169 535 535 TRP TRP D . n C 3 170 GLU 170 536 536 GLU GLU D . n C 3 171 ASP 171 537 537 ASP ASP D . n C 3 172 GLY 172 538 538 GLY GLY D . n C 3 173 ASP 173 539 539 ASP ASP D . n C 3 174 TYR 174 540 540 TYR TYR D . n C 3 175 TYR 175 541 541 TYR TYR D . n C 3 176 ARG 176 542 542 ARG ARG D . n C 3 177 LYS 177 543 543 LYS LYS D . n C 3 178 GLN 178 544 544 GLN GLN D . n C 3 179 LEU 179 545 545 LEU LEU D . n C 3 180 SER 180 546 546 SER SER D . n C 3 181 PRO 181 547 547 PRO PRO D . n C 3 182 LEU 182 548 548 LEU LEU D . n C 3 183 GLU 183 549 549 GLU GLU D . n C 3 184 GLY 184 550 550 GLY GLY D . n C 3 185 GLY 185 551 551 GLY GLY D . n C 3 186 GLY 186 552 552 GLY GLY D . n C 3 187 TRP 187 553 553 TRP TRP D . n C 3 188 LEU 188 554 554 LEU LEU D . n C 3 189 VAL 189 555 555 VAL VAL D . n C 3 190 ALA 190 556 556 ALA ALA D . n C 3 191 SER 191 557 557 SER SER D . n C 3 192 GLY 192 558 558 GLY GLY D . n C 3 193 SER 193 559 559 SER SER D . n C 3 194 THR 194 560 560 THR THR D . n C 3 195 VAL 195 561 561 VAL VAL D . n C 3 196 ALA 196 562 562 ALA ALA D . n C 3 197 MET 197 563 563 MET MET D . n C 3 198 THR 198 564 564 THR THR D . n C 3 199 GLU 199 565 565 GLU GLU D . n C 3 200 GLN 200 566 566 GLN GLN D . n C 3 201 LEU 201 567 567 LEU LEU D . n C 3 202 GLN 202 568 568 GLN GLN D . n C 3 203 MET 203 569 569 MET MET D . n C 3 204 GLY 204 570 570 GLY GLY D . n C 3 205 PHE 205 571 571 PHE PHE D . n C 3 206 GLY 206 572 572 GLY GLY D . n C 3 207 ILE 207 573 573 ILE ILE D . n C 3 208 THR 208 574 574 THR THR D . n C 3 209 VAL 209 575 575 VAL VAL D . n C 3 210 GLN 210 576 576 GLN GLN D . n C 3 211 TYR 211 577 577 TYR TYR D . n C 3 212 GLY 212 578 578 GLY GLY D . n C 3 213 THR 213 579 579 THR THR D . n C 3 214 ASP 214 580 580 ASP ASP D . n C 3 215 THR 215 581 581 THR THR D . n C 3 216 ASN 216 582 582 ASN ASN D . n C 3 217 SER 217 583 583 SER SER D . n C 3 218 VAL 218 584 584 VAL VAL D . n C 3 219 CYS 219 585 585 CYS CYS D . n C 3 220 PRO 220 586 586 PRO PRO D . n C 3 221 LYS 221 587 587 LYS LYS D . n C 3 222 LEU 222 588 588 LEU LEU D . n C 3 223 GLU 223 589 ? ? ? D . n C 3 224 HIS 224 590 ? ? ? D . n C 3 225 HIS 225 591 ? ? ? D . n C 3 226 HIS 226 592 ? ? ? D . n C 3 227 HIS 227 593 ? ? ? D . n C 3 228 HIS 228 594 ? ? ? D . n C 3 229 HIS 229 595 ? ? ? D . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero D 4 NAG 1 C NAG 1 C NAG 1 n D 4 FUC 2 C FUC 2 C FUC 2 n E 5 NAG 1 E NAG 1 E NAG 1 n E 5 NAG 2 E NAG 2 E NAG 2 n # _pdbx_nonpoly_scheme.asym_id F _pdbx_nonpoly_scheme.entity_id 6 _pdbx_nonpoly_scheme.mon_id NAG _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 601 _pdbx_nonpoly_scheme.auth_seq_num 589 _pdbx_nonpoly_scheme.pdb_mon_id NAG _pdbx_nonpoly_scheme.auth_mon_id NAG _pdbx_nonpoly_scheme.pdb_strand_id D _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.18.2_3874 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? . 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 8IDM _cell.details ? _cell.formula_units_Z ? _cell.length_a 104.440 _cell.length_a_esd ? _cell.length_b 104.440 _cell.length_b_esd ? _cell.length_c 318.223 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8IDM _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8IDM _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 4.93 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 75.07 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.05 M Magnesium chloride hexahydrate, 0.1 M HEPES, pH 7.5, 30% v/v PEGmme 550' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 291.15 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER2 S 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-07-09 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.987 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL02U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.987 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL02U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 8IDM _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.59 _reflns.d_resolution_low 16.22 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 12591 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 97.87 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 16.0 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 14.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.0 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 3.59 _reflns_shell.d_res_low 3.717 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1193 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.606 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8IDM _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.59 _refine.ls_d_res_low 16.22 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 12539 _refine.ls_number_reflns_R_free 593 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.23 _refine.ls_percent_reflns_R_free 4.73 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2543 _refine.ls_R_factor_R_free 0.2726 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2534 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 34.48 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.56 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 3.59 _refine_hist.d_res_low 16.22 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 3629 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 3563 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 66 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.004 ? 3715 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.819 ? 5057 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 11.680 ? 545 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.051 ? 581 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.005 ? 641 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 3.59 3.94 . . 136 2870 98.00 . . . . 0.3669 . . . . . . . . . . . 0.4109 'X-RAY DIFFRACTION' 3.94 4.50 . . 144 2922 99.00 . . . . 0.3000 . . . . . . . . . . . 0.3097 'X-RAY DIFFRACTION' 4.50 5.63 . . 158 2978 100.00 . . . . 0.2553 . . . . . . . . . . . 0.2519 'X-RAY DIFFRACTION' 5.63 16.22 . . 155 3176 100.00 . . . . 0.2199 . . . . . . . . . . . 0.2512 # _struct.entry_id 8IDM _struct.title 'Crystal structure of nanobody VHH-227 with nanobody VHH-T71 and MERS-CoV RBD' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8IDM _struct_keywords.text 'MERS-CoV, nanobody, VIRAL PROTEIN-IMMUNE SYSTEM complex, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 8IDM 8IDM ? 1 ? 1 2 PDB 8IDM 8IDM ? 2 ? 1 3 UNP R9UQ53_MERS R9UQ53 ? 3 ;EAKPSGSVVEQAEGVECDFSPLLSGTPPQVYNFKRLVFTNCNYNLTKLLSLFSVNDFTCSQISPAAIASNCYSSLILDYF SYPLSMKSDLSVSSAGPISQFNYKQSFSNPTCLILATVPHNLTTITKPLKYSYINKCSRLLSDDRTEVPQLVNANQYSPC VSIVPSTVWEDGDYYRKQLSPLEGGGWLVASGSTVAMTEQLQMGFGITVQYGTDTNSVCPKLE ; 367 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8IDM B 1 ? 135 ? 8IDM 1 ? 135 ? 1 135 2 2 8IDM A 1 ? 136 ? 8IDM 0 ? 135 ? 0 135 3 3 8IDM D 1 ? 223 ? R9UQ53 367 ? 589 ? 367 589 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 3 8IDM HIS D 224 ? UNP R9UQ53 ? ? 'expression tag' 590 1 3 8IDM HIS D 225 ? UNP R9UQ53 ? ? 'expression tag' 591 2 3 8IDM HIS D 226 ? UNP R9UQ53 ? ? 'expression tag' 592 3 3 8IDM HIS D 227 ? UNP R9UQ53 ? ? 'expression tag' 593 4 3 8IDM HIS D 228 ? UNP R9UQ53 ? ? 'expression tag' 594 5 3 8IDM HIS D 229 ? UNP R9UQ53 ? ? 'expression tag' 595 6 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 3 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,D 2 1 B 3 1 C,E,F # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLU A 85 ? THR A 89 ? GLU B 85 THR B 89 5 ? 5 HELX_P HELX_P2 AA2 THR A 100 ? CYS A 107 ? THR B 100 CYS B 107 1 ? 8 HELX_P HELX_P3 AA3 GLY B 55 ? GLY B 57 ? GLY A 54 GLY A 56 5 ? 3 HELX_P HELX_P4 AA4 LYS B 88 ? SER B 92 ? LYS A 87 SER A 91 5 ? 5 HELX_P HELX_P5 AA5 ARG B 102 ? SER B 108 ? ARG A 101 SER A 107 1 ? 7 HELX_P HELX_P6 AA6 LEU B 113 ? TYR B 117 ? LEU A 112 TYR A 116 5 ? 5 HELX_P HELX_P7 AA7 PHE C 19 ? SER C 24 ? PHE D 385 SER D 390 1 ? 6 HELX_P HELX_P8 AA8 GLN C 29 ? PHE C 33 ? GLN D 395 PHE D 399 5 ? 5 HELX_P HELX_P9 AA9 ASN C 44 ? PHE C 52 ? ASN D 410 PHE D 418 1 ? 9 HELX_P HELX_P10 AB1 SER C 63 ? ASN C 70 ? SER D 429 ASN D 436 1 ? 8 HELX_P HELX_P11 AB2 PRO C 83 ? SER C 85 ? PRO D 449 SER D 451 5 ? 3 HELX_P HELX_P12 AB3 MET C 86 ? VAL C 92 ? MET D 452 VAL D 458 1 ? 7 HELX_P HELX_P13 AB4 GLY C 96 ? ASN C 102 ? GLY D 462 ASN D 468 1 ? 7 HELX_P HELX_P14 AB5 SER C 158 ? SER C 162 ? SER D 524 SER D 528 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 22 SG ? ? ? 1_555 A CYS 94 SG ? ? B CYS 22 B CYS 94 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf2 disulf ? ? A CYS 31 SG ? ? ? 1_555 A CYS 107 SG ? ? B CYS 31 B CYS 107 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf3 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 97 SG ? ? A CYS 21 A CYS 96 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf4 disulf ? ? C CYS 17 SG ? ? ? 1_555 C CYS 41 SG ? ? D CYS 383 D CYS 407 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf5 disulf ? ? C CYS 59 SG ? ? ? 1_555 C CYS 112 SG ? ? D CYS 425 D CYS 478 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf6 disulf ? ? C CYS 71 SG ? ? ? 1_555 C CYS 219 SG ? ? D CYS 437 D CYS 585 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf7 disulf ? ? C CYS 137 SG ? ? ? 1_555 C CYS 160 SG ? ? D CYS 503 D CYS 526 1_555 ? ? ? ? ? ? ? 2.032 ? ? covale1 covale one ? A ASN 54 ND2 ? ? ? 1_555 D NAG . C1 ? ? B ASN 54 C NAG 1 1_555 ? ? ? ? ? ? ? 1.445 ? N-Glycosylation covale2 covale one ? C ASN 44 ND2 ? ? ? 1_555 F NAG . C1 ? ? D ASN 410 D NAG 601 1_555 ? ? ? ? ? ? ? 1.447 ? N-Glycosylation covale3 covale one ? C ASN 121 ND2 ? ? ? 1_555 E NAG . C1 ? ? D ASN 487 E NAG 1 1_555 ? ? ? ? ? ? ? 1.462 ? N-Glycosylation covale4 covale both ? D NAG . O6 ? ? ? 1_555 D FUC . C1 ? ? C NAG 1 C FUC 2 1_555 ? ? ? ? ? ? ? 1.439 ? ? covale5 covale both ? E NAG . O4 ? ? ? 1_555 E NAG . C1 ? ? E NAG 1 E NAG 2 1_555 ? ? ? ? ? ? ? 1.433 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 6 ? AA3 ? 4 ? AA4 ? 4 ? AA5 ? 6 ? AA6 ? 4 ? AA7 ? 5 ? AA8 ? 2 ? AA9 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA5 4 5 ? anti-parallel AA5 5 6 ? anti-parallel AA6 1 2 ? parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA7 3 4 ? anti-parallel AA7 4 5 ? anti-parallel AA8 1 2 ? parallel AA9 1 2 ? anti-parallel AA9 2 3 ? anti-parallel AA9 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLN A 5 ? SER A 7 ? GLN B 5 SER B 7 AA1 2 LEU A 18 ? SER A 23 ? LEU B 18 SER B 23 AA1 3 THR A 76 ? MET A 81 ? THR B 76 MET B 81 AA1 4 PHE A 66 ? LEU A 70 ? PHE B 66 LEU B 70 AA2 1 GLY A 10 ? GLN A 13 ? GLY B 10 GLN B 13 AA2 2 THR A 123 ? SER A 128 ? THR B 123 SER B 128 AA2 3 ALA A 90 ? ALA A 96 ? ALA B 90 ALA B 96 AA2 4 CYS A 31 ? GLN A 37 ? CYS B 31 GLN B 37 AA2 5 ARG A 43 ? TYR A 50 ? ARG B 43 TYR B 50 AA2 6 SER A 55 ? TYR A 58 ? SER B 55 TYR B 58 AA3 1 GLY A 10 ? GLN A 13 ? GLY B 10 GLN B 13 AA3 2 THR A 123 ? SER A 128 ? THR B 123 SER B 128 AA3 3 ALA A 90 ? ALA A 96 ? ALA B 90 ALA B 96 AA3 4 TYR A 118 ? TRP A 119 ? TYR B 118 TRP B 119 AA4 1 LEU B 4 ? SER B 7 ? LEU A 3 SER A 6 AA4 2 LEU B 18 ? PHE B 24 ? LEU A 17 PHE A 23 AA4 3 VAL B 79 ? MET B 84 ? VAL A 78 MET A 83 AA4 4 PHE B 69 ? ARG B 73 ? PHE A 68 ARG A 72 AA5 1 GLY B 10 ? GLN B 13 ? GLY A 9 GLN A 12 AA5 2 THR B 124 ? SER B 129 ? THR A 123 SER A 128 AA5 3 GLY B 93 ? THR B 99 ? GLY A 92 THR A 98 AA5 4 ALA B 34 ? GLN B 40 ? ALA A 33 GLN A 39 AA5 5 GLU B 47 ? ASN B 53 ? GLU A 46 ASN A 52 AA5 6 THR B 59 ? TYR B 61 ? THR A 58 TYR A 60 AA6 1 GLY B 10 ? GLN B 13 ? GLY A 9 GLN A 12 AA6 2 THR B 124 ? SER B 129 ? THR A 123 SER A 128 AA6 3 GLY B 93 ? THR B 99 ? GLY A 92 THR A 98 AA6 4 THR B 119 ? TRP B 120 ? THR A 118 TRP A 119 AA7 1 LYS C 34 ? PHE C 38 ? LYS D 400 PHE D 404 AA7 2 SER C 74 ? SER C 81 ? SER D 440 SER D 447 AA7 3 GLN C 202 ? GLN C 210 ? GLN D 568 GLN D 576 AA7 4 THR C 111 ? THR C 117 ? THR D 477 THR D 483 AA7 5 SER C 53 ? SER C 60 ? SER D 419 SER D 426 AA8 1 ASN C 42 ? TYR C 43 ? ASN D 408 TYR D 409 AA8 2 CYS C 219 ? PRO C 220 ? CYS D 585 PRO D 586 AA9 1 GLU C 147 ? PRO C 149 ? GLU D 513 PRO D 515 AA9 2 LYS C 130 ? LEU C 140 ? LYS D 496 LEU D 506 AA9 3 TRP C 187 ? ALA C 196 ? TRP D 553 ALA D 562 AA9 4 TYR C 174 ? GLN C 178 ? TYR D 540 GLN D 544 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N SER A 7 ? N SER B 7 O SER A 21 ? O SER B 21 AA1 2 3 N LEU A 20 ? N LEU B 20 O LEU A 79 ? O LEU B 79 AA1 3 4 O TYR A 78 ? O TYR B 78 N SER A 69 ? N SER B 69 AA2 1 2 N GLY A 10 ? N GLY B 10 O THR A 126 ? O THR B 126 AA2 2 3 O VAL A 125 ? O VAL B 125 N ALA A 90 ? N ALA B 90 AA2 3 4 O ARG A 91 ? O ARG B 91 N GLN A 37 ? N GLN B 37 AA2 4 5 N TRP A 34 ? N TRP B 34 O VAL A 46 ? O VAL B 46 AA2 5 6 N SER A 48 ? N SER B 48 O TYR A 57 ? O TYR B 57 AA3 1 2 N GLY A 10 ? N GLY B 10 O THR A 126 ? O THR B 126 AA3 2 3 O VAL A 125 ? O VAL B 125 N ALA A 90 ? N ALA B 90 AA3 3 4 N ALA A 96 ? N ALA B 96 O TYR A 118 ? O TYR B 118 AA4 1 2 N GLN B 5 ? N GLN A 4 O THR B 23 ? O THR A 22 AA4 2 3 N CYS B 22 ? N CYS A 21 O ALA B 80 ? O ALA A 79 AA4 3 4 O ILE B 83 ? O ILE A 82 N THR B 70 ? N THR A 69 AA5 1 2 N VAL B 12 ? N VAL A 11 O THR B 127 ? O THR A 126 AA5 2 3 O VAL B 126 ? O VAL A 125 N GLY B 93 ? N GLY A 92 AA5 3 4 O ILE B 94 ? O ILE A 93 N GLN B 40 ? N GLN A 39 AA5 4 5 N ARG B 39 ? N ARG A 38 O GLU B 47 ? O GLU A 46 AA5 5 6 N ALA B 51 ? N ALA A 50 O TYR B 60 ? O TYR A 59 AA6 1 2 N VAL B 12 ? N VAL A 11 O THR B 127 ? O THR A 126 AA6 2 3 O VAL B 126 ? O VAL A 125 N GLY B 93 ? N GLY A 92 AA6 3 4 N THR B 99 ? N THR A 98 O THR B 119 ? O THR A 118 AA7 1 2 N LEU C 36 ? N LEU D 402 O LEU C 77 ? O LEU D 443 AA7 2 3 N ASP C 78 ? N ASP D 444 O GLY C 206 ? O GLY D 572 AA7 3 4 O PHE C 205 ? O PHE D 571 N ILE C 114 ? N ILE D 480 AA7 4 5 O LEU C 115 ? O LEU D 481 N ASN C 55 ? N ASN D 421 AA8 1 2 N TYR C 43 ? N TYR D 409 O CYS C 219 ? O CYS D 585 AA9 1 2 O VAL C 148 ? O VAL D 514 N ARG C 139 ? N ARG D 505 AA9 2 3 N TYR C 131 ? N TYR D 497 O VAL C 195 ? O VAL D 561 AA9 3 4 O ALA C 190 ? O ALA D 556 N TYR C 175 ? N TYR D 541 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLY _pdbx_validate_close_contact.auth_seq_id_1 53 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OG1 _pdbx_validate_close_contact.auth_asym_id_2 D _pdbx_validate_close_contact.auth_comp_id_2 THR _pdbx_validate_close_contact.auth_seq_id_2 489 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.03 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 B _pdbx_validate_symm_contact.auth_comp_id_1 SER _pdbx_validate_symm_contact.auth_seq_id_1 11 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 N _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 SER _pdbx_validate_symm_contact.auth_seq_id_2 10 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 7_455 _pdbx_validate_symm_contact.dist 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA B 90 ? ? -180.00 -165.06 2 1 ARG B 109 ? ? -126.89 -61.87 3 1 TYR B 114 ? ? 53.67 71.77 4 1 ASN A 32 ? ? -157.00 -153.70 5 1 ASP A 99 ? ? 57.77 77.24 6 1 SER D 459 ? ? 81.69 -95.51 7 1 ASN D 468 ? ? -112.27 -72.14 8 1 ASP D 510 ? ? 70.80 161.25 9 1 ASP D 580 ? ? -27.58 114.16 10 1 ASN D 582 ? ? -59.98 98.51 # _pdbx_entry_details.entry_id 8IDM _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B HIS 130 ? A HIS 130 2 1 Y 1 B HIS 131 ? A HIS 131 3 1 Y 1 B HIS 132 ? A HIS 132 4 1 Y 1 B HIS 133 ? A HIS 133 5 1 Y 1 B HIS 134 ? A HIS 134 6 1 Y 1 B HIS 135 ? A HIS 135 7 1 Y 1 A GLN 0 ? B GLN 1 8 1 Y 1 A HIS 130 ? B HIS 131 9 1 Y 1 A HIS 131 ? B HIS 132 10 1 Y 1 A HIS 132 ? B HIS 133 11 1 Y 1 A HIS 133 ? B HIS 134 12 1 Y 1 A HIS 134 ? B HIS 135 13 1 Y 1 A HIS 135 ? B HIS 136 14 1 Y 1 D GLU 367 ? C GLU 1 15 1 Y 1 D ALA 368 ? C ALA 2 16 1 Y 1 D LYS 369 ? C LYS 3 17 1 Y 1 D PRO 370 ? C PRO 4 18 1 Y 1 D SER 371 ? C SER 5 19 1 Y 1 D GLY 372 ? C GLY 6 20 1 Y 1 D SER 373 ? C SER 7 21 1 Y 1 D VAL 374 ? C VAL 8 22 1 Y 1 D VAL 375 ? C VAL 9 23 1 Y 1 D GLU 376 ? C GLU 10 24 1 Y 1 D GLN 377 ? C GLN 11 25 1 Y 1 D ALA 378 ? C ALA 12 26 1 Y 1 D GLU 379 ? C GLU 13 27 1 Y 1 D GLY 380 ? C GLY 14 28 1 Y 1 D GLU 589 ? C GLU 223 29 1 Y 1 D HIS 590 ? C HIS 224 30 1 Y 1 D HIS 591 ? C HIS 225 31 1 Y 1 D HIS 592 ? C HIS 226 32 1 Y 1 D HIS 593 ? C HIS 227 33 1 Y 1 D HIS 594 ? C HIS 228 34 1 Y 1 D HIS 595 ? C HIS 229 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 FUC C1 C N R 88 FUC C2 C N S 89 FUC C3 C N R 90 FUC C4 C N S 91 FUC C5 C N S 92 FUC C6 C N N 93 FUC O1 O N N 94 FUC O2 O N N 95 FUC O3 O N N 96 FUC O4 O N N 97 FUC O5 O N N 98 FUC H1 H N N 99 FUC H2 H N N 100 FUC H3 H N N 101 FUC H4 H N N 102 FUC H5 H N N 103 FUC H61 H N N 104 FUC H62 H N N 105 FUC H63 H N N 106 FUC HO1 H N N 107 FUC HO2 H N N 108 FUC HO3 H N N 109 FUC HO4 H N N 110 GLN N N N N 111 GLN CA C N S 112 GLN C C N N 113 GLN O O N N 114 GLN CB C N N 115 GLN CG C N N 116 GLN CD C N N 117 GLN OE1 O N N 118 GLN NE2 N N N 119 GLN OXT O N N 120 GLN H H N N 121 GLN H2 H N N 122 GLN HA H N N 123 GLN HB2 H N N 124 GLN HB3 H N N 125 GLN HG2 H N N 126 GLN HG3 H N N 127 GLN HE21 H N N 128 GLN HE22 H N N 129 GLN HXT H N N 130 GLU N N N N 131 GLU CA C N S 132 GLU C C N N 133 GLU O O N N 134 GLU CB C N N 135 GLU CG C N N 136 GLU CD C N N 137 GLU OE1 O N N 138 GLU OE2 O N N 139 GLU OXT O N N 140 GLU H H N N 141 GLU H2 H N N 142 GLU HA H N N 143 GLU HB2 H N N 144 GLU HB3 H N N 145 GLU HG2 H N N 146 GLU HG3 H N N 147 GLU HE2 H N N 148 GLU HXT H N N 149 GLY N N N N 150 GLY CA C N N 151 GLY C C N N 152 GLY O O N N 153 GLY OXT O N N 154 GLY H H N N 155 GLY H2 H N N 156 GLY HA2 H N N 157 GLY HA3 H N N 158 GLY HXT H N N 159 HIS N N N N 160 HIS CA C N S 161 HIS C C N N 162 HIS O O N N 163 HIS CB C N N 164 HIS CG C Y N 165 HIS ND1 N Y N 166 HIS CD2 C Y N 167 HIS CE1 C Y N 168 HIS NE2 N Y N 169 HIS OXT O N N 170 HIS H H N N 171 HIS H2 H N N 172 HIS HA H N N 173 HIS HB2 H N N 174 HIS HB3 H N N 175 HIS HD1 H N N 176 HIS HD2 H N N 177 HIS HE1 H N N 178 HIS HE2 H N N 179 HIS HXT H N N 180 ILE N N N N 181 ILE CA C N S 182 ILE C C N N 183 ILE O O N N 184 ILE CB C N S 185 ILE CG1 C N N 186 ILE CG2 C N N 187 ILE CD1 C N N 188 ILE OXT O N N 189 ILE H H N N 190 ILE H2 H N N 191 ILE HA H N N 192 ILE HB H N N 193 ILE HG12 H N N 194 ILE HG13 H N N 195 ILE HG21 H N N 196 ILE HG22 H N N 197 ILE HG23 H N N 198 ILE HD11 H N N 199 ILE HD12 H N N 200 ILE HD13 H N N 201 ILE HXT H N N 202 LEU N N N N 203 LEU CA C N S 204 LEU C C N N 205 LEU O O N N 206 LEU CB C N N 207 LEU CG C N N 208 LEU CD1 C N N 209 LEU CD2 C N N 210 LEU OXT O N N 211 LEU H H N N 212 LEU H2 H N N 213 LEU HA H N N 214 LEU HB2 H N N 215 LEU HB3 H N N 216 LEU HG H N N 217 LEU HD11 H N N 218 LEU HD12 H N N 219 LEU HD13 H N N 220 LEU HD21 H N N 221 LEU HD22 H N N 222 LEU HD23 H N N 223 LEU HXT H N N 224 LYS N N N N 225 LYS CA C N S 226 LYS C C N N 227 LYS O O N N 228 LYS CB C N N 229 LYS CG C N N 230 LYS CD C N N 231 LYS CE C N N 232 LYS NZ N N N 233 LYS OXT O N N 234 LYS H H N N 235 LYS H2 H N N 236 LYS HA H N N 237 LYS HB2 H N N 238 LYS HB3 H N N 239 LYS HG2 H N N 240 LYS HG3 H N N 241 LYS HD2 H N N 242 LYS HD3 H N N 243 LYS HE2 H N N 244 LYS HE3 H N N 245 LYS HZ1 H N N 246 LYS HZ2 H N N 247 LYS HZ3 H N N 248 LYS HXT H N N 249 MET N N N N 250 MET CA C N S 251 MET C C N N 252 MET O O N N 253 MET CB C N N 254 MET CG C N N 255 MET SD S N N 256 MET CE C N N 257 MET OXT O N N 258 MET H H N N 259 MET H2 H N N 260 MET HA H N N 261 MET HB2 H N N 262 MET HB3 H N N 263 MET HG2 H N N 264 MET HG3 H N N 265 MET HE1 H N N 266 MET HE2 H N N 267 MET HE3 H N N 268 MET HXT H N N 269 NAG C1 C N R 270 NAG C2 C N R 271 NAG C3 C N R 272 NAG C4 C N S 273 NAG C5 C N R 274 NAG C6 C N N 275 NAG C7 C N N 276 NAG C8 C N N 277 NAG N2 N N N 278 NAG O1 O N N 279 NAG O3 O N N 280 NAG O4 O N N 281 NAG O5 O N N 282 NAG O6 O N N 283 NAG O7 O N N 284 NAG H1 H N N 285 NAG H2 H N N 286 NAG H3 H N N 287 NAG H4 H N N 288 NAG H5 H N N 289 NAG H61 H N N 290 NAG H62 H N N 291 NAG H81 H N N 292 NAG H82 H N N 293 NAG H83 H N N 294 NAG HN2 H N N 295 NAG HO1 H N N 296 NAG HO3 H N N 297 NAG HO4 H N N 298 NAG HO6 H N N 299 PHE N N N N 300 PHE CA C N S 301 PHE C C N N 302 PHE O O N N 303 PHE CB C N N 304 PHE CG C Y N 305 PHE CD1 C Y N 306 PHE CD2 C Y N 307 PHE CE1 C Y N 308 PHE CE2 C Y N 309 PHE CZ C Y N 310 PHE OXT O N N 311 PHE H H N N 312 PHE H2 H N N 313 PHE HA H N N 314 PHE HB2 H N N 315 PHE HB3 H N N 316 PHE HD1 H N N 317 PHE HD2 H N N 318 PHE HE1 H N N 319 PHE HE2 H N N 320 PHE HZ H N N 321 PHE HXT H N N 322 PRO N N N N 323 PRO CA C N S 324 PRO C C N N 325 PRO O O N N 326 PRO CB C N N 327 PRO CG C N N 328 PRO CD C N N 329 PRO OXT O N N 330 PRO H H N N 331 PRO HA H N N 332 PRO HB2 H N N 333 PRO HB3 H N N 334 PRO HG2 H N N 335 PRO HG3 H N N 336 PRO HD2 H N N 337 PRO HD3 H N N 338 PRO HXT H N N 339 SER N N N N 340 SER CA C N S 341 SER C C N N 342 SER O O N N 343 SER CB C N N 344 SER OG O N N 345 SER OXT O N N 346 SER H H N N 347 SER H2 H N N 348 SER HA H N N 349 SER HB2 H N N 350 SER HB3 H N N 351 SER HG H N N 352 SER HXT H N N 353 THR N N N N 354 THR CA C N S 355 THR C C N N 356 THR O O N N 357 THR CB C N R 358 THR OG1 O N N 359 THR CG2 C N N 360 THR OXT O N N 361 THR H H N N 362 THR H2 H N N 363 THR HA H N N 364 THR HB H N N 365 THR HG1 H N N 366 THR HG21 H N N 367 THR HG22 H N N 368 THR HG23 H N N 369 THR HXT H N N 370 TRP N N N N 371 TRP CA C N S 372 TRP C C N N 373 TRP O O N N 374 TRP CB C N N 375 TRP CG C Y N 376 TRP CD1 C Y N 377 TRP CD2 C Y N 378 TRP NE1 N Y N 379 TRP CE2 C Y N 380 TRP CE3 C Y N 381 TRP CZ2 C Y N 382 TRP CZ3 C Y N 383 TRP CH2 C Y N 384 TRP OXT O N N 385 TRP H H N N 386 TRP H2 H N N 387 TRP HA H N N 388 TRP HB2 H N N 389 TRP HB3 H N N 390 TRP HD1 H N N 391 TRP HE1 H N N 392 TRP HE3 H N N 393 TRP HZ2 H N N 394 TRP HZ3 H N N 395 TRP HH2 H N N 396 TRP HXT H N N 397 TYR N N N N 398 TYR CA C N S 399 TYR C C N N 400 TYR O O N N 401 TYR CB C N N 402 TYR CG C Y N 403 TYR CD1 C Y N 404 TYR CD2 C Y N 405 TYR CE1 C Y N 406 TYR CE2 C Y N 407 TYR CZ C Y N 408 TYR OH O N N 409 TYR OXT O N N 410 TYR H H N N 411 TYR H2 H N N 412 TYR HA H N N 413 TYR HB2 H N N 414 TYR HB3 H N N 415 TYR HD1 H N N 416 TYR HD2 H N N 417 TYR HE1 H N N 418 TYR HE2 H N N 419 TYR HH H N N 420 TYR HXT H N N 421 VAL N N N N 422 VAL CA C N S 423 VAL C C N N 424 VAL O O N N 425 VAL CB C N N 426 VAL CG1 C N N 427 VAL CG2 C N N 428 VAL OXT O N N 429 VAL H H N N 430 VAL H2 H N N 431 VAL HA H N N 432 VAL HB H N N 433 VAL HG11 H N N 434 VAL HG12 H N N 435 VAL HG13 H N N 436 VAL HG21 H N N 437 VAL HG22 H N N 438 VAL HG23 H N N 439 VAL HXT H N N 440 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 FUC C1 C2 sing N N 83 FUC C1 O1 sing N N 84 FUC C1 O5 sing N N 85 FUC C1 H1 sing N N 86 FUC C2 C3 sing N N 87 FUC C2 O2 sing N N 88 FUC C2 H2 sing N N 89 FUC C3 C4 sing N N 90 FUC C3 O3 sing N N 91 FUC C3 H3 sing N N 92 FUC C4 C5 sing N N 93 FUC C4 O4 sing N N 94 FUC C4 H4 sing N N 95 FUC C5 C6 sing N N 96 FUC C5 O5 sing N N 97 FUC C5 H5 sing N N 98 FUC C6 H61 sing N N 99 FUC C6 H62 sing N N 100 FUC C6 H63 sing N N 101 FUC O1 HO1 sing N N 102 FUC O2 HO2 sing N N 103 FUC O3 HO3 sing N N 104 FUC O4 HO4 sing N N 105 GLN N CA sing N N 106 GLN N H sing N N 107 GLN N H2 sing N N 108 GLN CA C sing N N 109 GLN CA CB sing N N 110 GLN CA HA sing N N 111 GLN C O doub N N 112 GLN C OXT sing N N 113 GLN CB CG sing N N 114 GLN CB HB2 sing N N 115 GLN CB HB3 sing N N 116 GLN CG CD sing N N 117 GLN CG HG2 sing N N 118 GLN CG HG3 sing N N 119 GLN CD OE1 doub N N 120 GLN CD NE2 sing N N 121 GLN NE2 HE21 sing N N 122 GLN NE2 HE22 sing N N 123 GLN OXT HXT sing N N 124 GLU N CA sing N N 125 GLU N H sing N N 126 GLU N H2 sing N N 127 GLU CA C sing N N 128 GLU CA CB sing N N 129 GLU CA HA sing N N 130 GLU C O doub N N 131 GLU C OXT sing N N 132 GLU CB CG sing N N 133 GLU CB HB2 sing N N 134 GLU CB HB3 sing N N 135 GLU CG CD sing N N 136 GLU CG HG2 sing N N 137 GLU CG HG3 sing N N 138 GLU CD OE1 doub N N 139 GLU CD OE2 sing N N 140 GLU OE2 HE2 sing N N 141 GLU OXT HXT sing N N 142 GLY N CA sing N N 143 GLY N H sing N N 144 GLY N H2 sing N N 145 GLY CA C sing N N 146 GLY CA HA2 sing N N 147 GLY CA HA3 sing N N 148 GLY C O doub N N 149 GLY C OXT sing N N 150 GLY OXT HXT sing N N 151 HIS N CA sing N N 152 HIS N H sing N N 153 HIS N H2 sing N N 154 HIS CA C sing N N 155 HIS CA CB sing N N 156 HIS CA HA sing N N 157 HIS C O doub N N 158 HIS C OXT sing N N 159 HIS CB CG sing N N 160 HIS CB HB2 sing N N 161 HIS CB HB3 sing N N 162 HIS CG ND1 sing Y N 163 HIS CG CD2 doub Y N 164 HIS ND1 CE1 doub Y N 165 HIS ND1 HD1 sing N N 166 HIS CD2 NE2 sing Y N 167 HIS CD2 HD2 sing N N 168 HIS CE1 NE2 sing Y N 169 HIS CE1 HE1 sing N N 170 HIS NE2 HE2 sing N N 171 HIS OXT HXT sing N N 172 ILE N CA sing N N 173 ILE N H sing N N 174 ILE N H2 sing N N 175 ILE CA C sing N N 176 ILE CA CB sing N N 177 ILE CA HA sing N N 178 ILE C O doub N N 179 ILE C OXT sing N N 180 ILE CB CG1 sing N N 181 ILE CB CG2 sing N N 182 ILE CB HB sing N N 183 ILE CG1 CD1 sing N N 184 ILE CG1 HG12 sing N N 185 ILE CG1 HG13 sing N N 186 ILE CG2 HG21 sing N N 187 ILE CG2 HG22 sing N N 188 ILE CG2 HG23 sing N N 189 ILE CD1 HD11 sing N N 190 ILE CD1 HD12 sing N N 191 ILE CD1 HD13 sing N N 192 ILE OXT HXT sing N N 193 LEU N CA sing N N 194 LEU N H sing N N 195 LEU N H2 sing N N 196 LEU CA C sing N N 197 LEU CA CB sing N N 198 LEU CA HA sing N N 199 LEU C O doub N N 200 LEU C OXT sing N N 201 LEU CB CG sing N N 202 LEU CB HB2 sing N N 203 LEU CB HB3 sing N N 204 LEU CG CD1 sing N N 205 LEU CG CD2 sing N N 206 LEU CG HG sing N N 207 LEU CD1 HD11 sing N N 208 LEU CD1 HD12 sing N N 209 LEU CD1 HD13 sing N N 210 LEU CD2 HD21 sing N N 211 LEU CD2 HD22 sing N N 212 LEU CD2 HD23 sing N N 213 LEU OXT HXT sing N N 214 LYS N CA sing N N 215 LYS N H sing N N 216 LYS N H2 sing N N 217 LYS CA C sing N N 218 LYS CA CB sing N N 219 LYS CA HA sing N N 220 LYS C O doub N N 221 LYS C OXT sing N N 222 LYS CB CG sing N N 223 LYS CB HB2 sing N N 224 LYS CB HB3 sing N N 225 LYS CG CD sing N N 226 LYS CG HG2 sing N N 227 LYS CG HG3 sing N N 228 LYS CD CE sing N N 229 LYS CD HD2 sing N N 230 LYS CD HD3 sing N N 231 LYS CE NZ sing N N 232 LYS CE HE2 sing N N 233 LYS CE HE3 sing N N 234 LYS NZ HZ1 sing N N 235 LYS NZ HZ2 sing N N 236 LYS NZ HZ3 sing N N 237 LYS OXT HXT sing N N 238 MET N CA sing N N 239 MET N H sing N N 240 MET N H2 sing N N 241 MET CA C sing N N 242 MET CA CB sing N N 243 MET CA HA sing N N 244 MET C O doub N N 245 MET C OXT sing N N 246 MET CB CG sing N N 247 MET CB HB2 sing N N 248 MET CB HB3 sing N N 249 MET CG SD sing N N 250 MET CG HG2 sing N N 251 MET CG HG3 sing N N 252 MET SD CE sing N N 253 MET CE HE1 sing N N 254 MET CE HE2 sing N N 255 MET CE HE3 sing N N 256 MET OXT HXT sing N N 257 NAG C1 C2 sing N N 258 NAG C1 O1 sing N N 259 NAG C1 O5 sing N N 260 NAG C1 H1 sing N N 261 NAG C2 C3 sing N N 262 NAG C2 N2 sing N N 263 NAG C2 H2 sing N N 264 NAG C3 C4 sing N N 265 NAG C3 O3 sing N N 266 NAG C3 H3 sing N N 267 NAG C4 C5 sing N N 268 NAG C4 O4 sing N N 269 NAG C4 H4 sing N N 270 NAG C5 C6 sing N N 271 NAG C5 O5 sing N N 272 NAG C5 H5 sing N N 273 NAG C6 O6 sing N N 274 NAG C6 H61 sing N N 275 NAG C6 H62 sing N N 276 NAG C7 C8 sing N N 277 NAG C7 N2 sing N N 278 NAG C7 O7 doub N N 279 NAG C8 H81 sing N N 280 NAG C8 H82 sing N N 281 NAG C8 H83 sing N N 282 NAG N2 HN2 sing N N 283 NAG O1 HO1 sing N N 284 NAG O3 HO3 sing N N 285 NAG O4 HO4 sing N N 286 NAG O6 HO6 sing N N 287 PHE N CA sing N N 288 PHE N H sing N N 289 PHE N H2 sing N N 290 PHE CA C sing N N 291 PHE CA CB sing N N 292 PHE CA HA sing N N 293 PHE C O doub N N 294 PHE C OXT sing N N 295 PHE CB CG sing N N 296 PHE CB HB2 sing N N 297 PHE CB HB3 sing N N 298 PHE CG CD1 doub Y N 299 PHE CG CD2 sing Y N 300 PHE CD1 CE1 sing Y N 301 PHE CD1 HD1 sing N N 302 PHE CD2 CE2 doub Y N 303 PHE CD2 HD2 sing N N 304 PHE CE1 CZ doub Y N 305 PHE CE1 HE1 sing N N 306 PHE CE2 CZ sing Y N 307 PHE CE2 HE2 sing N N 308 PHE CZ HZ sing N N 309 PHE OXT HXT sing N N 310 PRO N CA sing N N 311 PRO N CD sing N N 312 PRO N H sing N N 313 PRO CA C sing N N 314 PRO CA CB sing N N 315 PRO CA HA sing N N 316 PRO C O doub N N 317 PRO C OXT sing N N 318 PRO CB CG sing N N 319 PRO CB HB2 sing N N 320 PRO CB HB3 sing N N 321 PRO CG CD sing N N 322 PRO CG HG2 sing N N 323 PRO CG HG3 sing N N 324 PRO CD HD2 sing N N 325 PRO CD HD3 sing N N 326 PRO OXT HXT sing N N 327 SER N CA sing N N 328 SER N H sing N N 329 SER N H2 sing N N 330 SER CA C sing N N 331 SER CA CB sing N N 332 SER CA HA sing N N 333 SER C O doub N N 334 SER C OXT sing N N 335 SER CB OG sing N N 336 SER CB HB2 sing N N 337 SER CB HB3 sing N N 338 SER OG HG sing N N 339 SER OXT HXT sing N N 340 THR N CA sing N N 341 THR N H sing N N 342 THR N H2 sing N N 343 THR CA C sing N N 344 THR CA CB sing N N 345 THR CA HA sing N N 346 THR C O doub N N 347 THR C OXT sing N N 348 THR CB OG1 sing N N 349 THR CB CG2 sing N N 350 THR CB HB sing N N 351 THR OG1 HG1 sing N N 352 THR CG2 HG21 sing N N 353 THR CG2 HG22 sing N N 354 THR CG2 HG23 sing N N 355 THR OXT HXT sing N N 356 TRP N CA sing N N 357 TRP N H sing N N 358 TRP N H2 sing N N 359 TRP CA C sing N N 360 TRP CA CB sing N N 361 TRP CA HA sing N N 362 TRP C O doub N N 363 TRP C OXT sing N N 364 TRP CB CG sing N N 365 TRP CB HB2 sing N N 366 TRP CB HB3 sing N N 367 TRP CG CD1 doub Y N 368 TRP CG CD2 sing Y N 369 TRP CD1 NE1 sing Y N 370 TRP CD1 HD1 sing N N 371 TRP CD2 CE2 doub Y N 372 TRP CD2 CE3 sing Y N 373 TRP NE1 CE2 sing Y N 374 TRP NE1 HE1 sing N N 375 TRP CE2 CZ2 sing Y N 376 TRP CE3 CZ3 doub Y N 377 TRP CE3 HE3 sing N N 378 TRP CZ2 CH2 doub Y N 379 TRP CZ2 HZ2 sing N N 380 TRP CZ3 CH2 sing Y N 381 TRP CZ3 HZ3 sing N N 382 TRP CH2 HH2 sing N N 383 TRP OXT HXT sing N N 384 TYR N CA sing N N 385 TYR N H sing N N 386 TYR N H2 sing N N 387 TYR CA C sing N N 388 TYR CA CB sing N N 389 TYR CA HA sing N N 390 TYR C O doub N N 391 TYR C OXT sing N N 392 TYR CB CG sing N N 393 TYR CB HB2 sing N N 394 TYR CB HB3 sing N N 395 TYR CG CD1 doub Y N 396 TYR CG CD2 sing Y N 397 TYR CD1 CE1 sing Y N 398 TYR CD1 HD1 sing N N 399 TYR CD2 CE2 doub Y N 400 TYR CD2 HD2 sing N N 401 TYR CE1 CZ doub Y N 402 TYR CE1 HE1 sing N N 403 TYR CE2 CZ sing Y N 404 TYR CE2 HE2 sing N N 405 TYR CZ OH sing N N 406 TYR OH HH sing N N 407 TYR OXT HXT sing N N 408 VAL N CA sing N N 409 VAL N H sing N N 410 VAL N H2 sing N N 411 VAL CA C sing N N 412 VAL CA CB sing N N 413 VAL CA HA sing N N 414 VAL C O doub N N 415 VAL C OXT sing N N 416 VAL CB CG1 sing N N 417 VAL CB CG2 sing N N 418 VAL CB HB sing N N 419 VAL CG1 HG11 sing N N 420 VAL CG1 HG12 sing N N 421 VAL CG1 HG13 sing N N 422 VAL CG2 HG21 sing N N 423 VAL CG2 HG22 sing N N 424 VAL CG2 HG23 sing N N 425 VAL OXT HXT sing N N 426 # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 4 NAG 1 n 4 FUC 2 n 5 NAG 1 n 5 NAG 2 n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 NAG ? ? NAG ? ? 'SUBJECT OF INVESTIGATION' ? 2 FUC ? ? FUC ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 4L72 ? 2 ? 'experimental model' PDB 1XFP ? # _atom_sites.entry_id 8IDM _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.009575 _atom_sites.fract_transf_matrix[1][2] 0.005528 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011056 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003142 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_